HG10015326 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015326
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	binding partner of ACD11 1-like
Location	Chr02: 25814577 .. 25817528 (-)
RNA-Seq Expression	HG10015326
Synteny	HG10015326

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGGCCCGGCCCAGTTAAGGTAACTGTGGTCTAAAGTTATTCTTTCCGGCTGCGGAGGCTTTGGCGCCTCCTTTCTTCGGGAGTTTTTCTTCCTCTGGAAGTCAATTCATTTGTCTTCCTCTGCAAGTTTCATATTTCTACGAACGAATTCGCGAATTAAGTTACTGTTGCTGCGAAAATATGGATCCTGGTGGTTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACAGAGAAAGATGTCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTCGTTGAGATTGTTAGGTATTCATTTTGTTCCGTATCAAGCATTTAATTCCATGTCCTCGAGTCCGTAATTTCACCATCTTTTCGTCCTTTTTCGGTGAACAAGTTGTTTATTTGAAAGATCAATCGATCTTTCTAAGTGTGATTAGGTTTGAGTAGTTTGAAGAAGCTGTTTTGCATTGCACGCCTTAAGTTTATGGCCTTTTTGTTAGACTTTATATTTTAGTTTGTTTTTCCTTTTTTCGAAAGCGCTTGGTGTAAGGATTTCTGGTTTCATGAAAACAGATCTGGTGAAGATGCCTGCACTGCCTATGTGACATTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGTGAGTATTTCAATTCCAAATAAGCTTCAGGCCTACAATACAGTATTTGATTCAATTCTTCCATTACTCTTTATTTGGAGCTACAGGGTGTGCCAGCGAGCGCACTCTGATACTACATAGACATGTGATCTTTATATATATATATATATTTGATTTGATTTATGTTATTAATTTCTCTGATTTTTCATTTTTTTTTTGTATATGAAGTGAACACGAGAATCTTACGGATGCTCCAATTTAAAAAATATACCTTTCAAATTATTAATTTTTCTGAAGAATATAATTATATGGATTTAATGCATTGCATCGATACCGCATTCTTGGGTTGTGAGCCACATATTTAATTTATAATGCCAAGTTAAATCGCTCTTTTAAAAATTAACTTCTGTTGATGTGGCTCATTTGGCAATTTTGATTGTAGAAAGAATGAAACAGTGGGTTTTTTTTTTTTTTTTCCCCCGATTTAAAATGCTATTCAATTTTCTCTGGCTTTTTTTGGAGGAAGGAACTCTTCATCTGCTTTTGGTGAAGGATCTCTCTGTCTTTCCTCAATGAAGCAACCAATTGCCTTTGTAGAGGATTGAGTTCCTCTTTTACTGGATTTCTCCTATTAATAGTGAAGGATGCTTTCGTTTCATCCAGTAAGGCCCATTGTTAGAGAAGAAAACCCGAGTGTGGTTAGACCTTTGCTAAATAATAACAACAAAAAACAACAGTAACTATCAAAATCGAAATAATGGAAGGGAGAGAGAAAAAAAATTGGCTTTCAAATAATGAAAATTGCTTCATGAGCATTGAACCATAAAAGTATGGTTTTGGCATCATCAAATCTGGAGAAGAAGCCATAATAGGAATATACCATTGGAATGTTCTAAGAAGCACGAACGTGGATATAACTACGCATTCTGTTGAAACGTTTATCATTGTATAGACATTGCAGTTAAATGTTTTAGGCATATGACAAATCTGAATCTTCTTATACAAAAAATAATTAAAAAATAATAATAATAAAAGAAGATAATCTGAACCATAGACATATGGTATGGCAGATCTGAATCTGTGATTGAGAAACAATAGCATTGTTGTTTTTGTTACTGCTGCTGCTGAGTCTACGATTATAGGCAATAACGTTGTTGTTGAATTTGTGATAATTAGAGAGACAAACACATTGTTGCCGTTGTTGTTGAGTACACTGTGATTACAGATAAATAACATTGTTTTTGTTCTTGAATCCATAGTTATTAATAGTTATTGTTGAATAATCTGCTAGATACATTCTTCTCTCCTTGTTCTCTTTTGCTGCAAATTTTCGTTGTTTTCGATATGAATTATTGAAGGATTTTCAACCACATCAGATGAATATCCTCTTGGATTCAAATGATAAAGGGATTTCAATACGGGTATAAATTTCAGTTTGTAAGCATCGACTGTTCTGATTTTATTATCCTGTTTATGCTTTGGTCTACTATTAGGTCTTCAATCAATGATCATTTCTGGTTATCTGCTTAATGATGGTGAAAATACCTTTATTCACCTGATCGCACTTCATCATGCCATTAGTTTCTCTCCAAGGAGATGGTGGTCGTTACTTTTCATCCTGTGTTTTCCACCTGATAATAATGATCATGCTTTTAGAGTTCAATATCTGATTCTTGCAGGGTGCAACAATTGTAGATCAAAGAGTATGTATAACACGGTGGGGACATTTTGAGGACGAATTTGGTTTTTGGAGTAGGCCTTCTGGTTACCATGAAGAAGACAGTACTCCTGCTGTAAGTGCCAAAAATGATATATATTAATATTTCCTAACTGTTGCAATTTGCAAATGTTTTCTTCCTATAGACAATCTTTGATTAATTGATGAGTTCTCCATCTTGTAGTCGGCACAAAGAAGTCAGTTTATTTCCAGTGCTGGTAACGCAGTGACCATGGCCCAGGAAGTAGTCAAAACCATGCTGGCCATGGGTTACGTGTTGGGTAAAGATACATTAACCAAAGCCAAAGCCTTTGACGAATCTCATCAGGTTTCAGCAACGGCAGCAGCTAAGGTAGCAGATTTGAGTCATAGAATTGGCCTGACTGACATGATAGGTGCGGGTTTTGAAGCGGTTAAAACCGTGGATGAGAAGTACCATGTATTGCAGACCACCAAATCAGCTATATCAGCCACAGGAAGAACAGCCGCTGCCGCTGCAGATACCGTGGTCAGGAGTAGCTACTTCTCTAGGGGAGCTCTTTTCATGTCTGATGCCCTGAATCGAGCAGCCAAAGTTGCAGCTGACTTGGGTAGTCGTGGTCTTGAACATTAG

mRNA sequence

ATGGACGGCCCGGCCCAGTTAAGATCTGGTGAAGATGCCTGCACTGCCTATGTGACATTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGGTGCAACAATTGTAGATCAAAGAGTATGTATAACACGGTGGGGACATTTTGAGGACGAATTTGGTTTTTGGAGTAGGCCTTCTGGTTACCATGAAGAAGACAGTACTCCTGCTTCGGCACAAAGAAGTCAGTTTATTTCCAGTGCTGGTAACGCAGTGACCATGGCCCAGGAAGTAGTCAAAACCATGCTGGCCATGGGTTACGTGTTGGGTAAAGATACATTAACCAAAGCCAAAGCCTTTGACGAATCTCATCAGGTTTCAGCAACGGCAGCAGCTAAGGTAGCAGATTTGAGTCATAGAATTGGCCTGACTGACATGATAGGTGCGGGTTTTGAAGCGGTTAAAACCGTGGATGAGAAGTACCATGTATTGCAGACCACCAAATCAGCTATATCAGCCACAGGAAGAACAGCCGCTGCCGCTGCAGATACCGTGGTCAGGAGTAGCTACTTCTCTAGGGGAGCTCTTTTCATGTCTGATGCCCTGAATCGAGCAGCCAAAGTTGCAGCTGACTTGGGTAGTCGTGGTCTTGAACATTAG

Coding sequence (CDS)

ATGGACGGCCCGGCCCAGTTAAGATCTGGTGAAGATGCCTGCACTGCCTATGTGACATTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGGTGCAACAATTGTAGATCAAAGAGTATGTATAACACGGTGGGGACATTTTGAGGACGAATTTGGTTTTTGGAGTAGGCCTTCTGGTTACCATGAAGAAGACAGTACTCCTGCTTCGGCACAAAGAAGTCAGTTTATTTCCAGTGCTGGTAACGCAGTGACCATGGCCCAGGAAGTAGTCAAAACCATGCTGGCCATGGGTTACGTGTTGGGTAAAGATACATTAACCAAAGCCAAAGCCTTTGACGAATCTCATCAGGTTTCAGCAACGGCAGCAGCTAAGGTAGCAGATTTGAGTCATAGAATTGGCCTGACTGACATGATAGGTGCGGGTTTTGAAGCGGTTAAAACCGTGGATGAGAAGTACCATGTATTGCAGACCACCAAATCAGCTATATCAGCCACAGGAAGAACAGCCGCTGCCGCTGCAGATACCGTGGTCAGGAGTAGCTACTTCTCTAGGGGAGCTCTTTTCATGTCTGATGCCCTGAATCGAGCAGCCAAAGTTGCAGCTGACTTGGGTAGTCGTGGTCTTGAACATTAG

Protein sequence

MDGPAQLRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWSRPSGYHEEDSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSRGLEH

Homology

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BLAST of HG10015326 vs. NCBI nr
Match: XP_004135186.1 (binding partner of ACD11 1 [Cucumis sativus] >KGN51899.1 hypothetical protein Csa_008734 [Cucumis sativus])

HSP 1 Score: 382.5 bits (981), Expect = 2.4e-102
Identity = 196/207 (94.69%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 7   LRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWSRPSGYHEE 66
           +RSGEDACTAYVTFKDAYSQETACLLSGA IVDQRVCITRWGHF+DEFGFWSRP G+ EE
Sbjct: 38  VRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEE 97

Query: 67  DSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAA 126
           DSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAA
Sbjct: 98  DSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAA 157

Query: 127 KVADLSHRIGLTDMIGAGFEAVKTVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFS 186
           KVADLSHRIGLTDM+GAG+EAVK+VDEKYHVL+TTKSAISATGRTAAAAADTVVRSSYFS
Sbjct: 158 KVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFS 217

Query: 187 RGALFMSDALNRAAKVAADLGSRGLEH 214
           RGALFMSDALNRAAK AADLGSRGLEH
Sbjct: 218 RGALFMSDALNRAAKAAADLGSRGLEH 244

[Close]

BLAST of HG10015326 vs. NCBI nr
Match: XP_038892042.1 (binding partner of ACD11 1 [Benincasa hispida])

HSP 1 Score: 380.9 bits (977), Expect = 7.0e-102
Identity = 195/207 (94.20%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 7   LRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWSRPSGYHEE 66
           +RSG+DACTAYVTFKDAYSQETACLLSGA I+DQRVCITRWG+F+DEFGFWSR SG+HEE
Sbjct: 38  IRSGDDACTAYVTFKDAYSQETACLLSGAKIIDQRVCITRWGYFDDEFGFWSRSSGHHEE 97

Query: 67  DSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAA 126
           DSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKA DESHQVS TAAA
Sbjct: 98  DSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSTTAAA 157

Query: 127 KVADLSHRIGLTDMIGAGFEAVKTVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFS 186
           KVADLSHRIGLTDMIGAGFEAVKT+DEKYHVLQTTKSAISATG+TAAAAADTVVRSSYFS
Sbjct: 158 KVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGKTAAAAADTVVRSSYFS 217

Query: 187 RGALFMSDALNRAAKVAADLGSRGLEH 214
           RGALFMSDALNRAAKVAADLGSRGLEH
Sbjct: 218 RGALFMSDALNRAAKVAADLGSRGLEH 244

[Close]

BLAST of HG10015326 vs. NCBI nr
Match: XP_022988849.1 (binding partner of ACD11 1-like [Cucurbita maxima] >XP_022988857.1 binding partner of ACD11 1-like [Cucurbita maxima] >XP_023534995.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo] >XP_023535002.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.8 bits (974), Expect = 1.6e-101
Identity = 199/215 (92.56%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 3   GPAQL----RSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWS 62
           GP +L    RSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHF+DEFGFWS
Sbjct: 30  GPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWS 89

Query: 63  RPSGYHEEDSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESH 122
           RPSGYHEEDST ASAQRSQFISSAGNAVTMAQEVVKTML+MGYVLGKD LTKAK FDESH
Sbjct: 90  RPSGYHEEDST-ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESH 149

Query: 123 QVSATAAAKVADLSHRIGLTDMIGAGFEAVKTVDEKYHVLQTTKSAISATGRTAAAAADT 182
           QVSATAAAKVADLSHRIGLTDMIGAGFEAVKT+DEKYHVLQTTKSAISATGRTAAAAADT
Sbjct: 150 QVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGRTAAAAADT 209

Query: 183 VVRSSYFSRGALFMSDALNRAAKVAADLGSRGLEH 214
           VV+S YFSRGALF+SDALNRAAKVAADLGSRG+EH
Sbjct: 210 VVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH 243

[Close]

BLAST of HG10015326 vs. NCBI nr
Match: XP_022957393.1 (binding partner of ACD11 1-like [Cucurbita moschata] >XP_022957394.1 binding partner of ACD11 1-like [Cucurbita moschata])

HSP 1 Score: 378.6 bits (971), Expect = 3.5e-101
Identity = 198/215 (92.09%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 3   GPAQL----RSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWS 62
           GP +L    RSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHF+DEFGFWS
Sbjct: 30  GPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWS 89

Query: 63  RPSGYHEEDSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESH 122
           RPSGYHEEDST ASAQRSQFISSAGNAVTMAQEVVKTML+MGYVLGKD LTKAK FDESH
Sbjct: 90  RPSGYHEEDST-ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESH 149

Query: 123 QVSATAAAKVADLSHRIGLTDMIGAGFEAVKTVDEKYHVLQTTKSAISATGRTAAAAADT 182
           QVSATAAAKVADLSHRIGLTDMIGAGFEAVKT+D+KYHVLQTTKSAISATGRTAAAAADT
Sbjct: 150 QVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDDKYHVLQTTKSAISATGRTAAAAADT 209

Query: 183 VVRSSYFSRGALFMSDALNRAAKVAADLGSRGLEH 214
           VV+S YFSRGALF+SDALNRAAKVAADLGSRG+EH
Sbjct: 210 VVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH 243

[Close]

BLAST of HG10015326 vs. NCBI nr
Match: XP_008446330.1 (PREDICTED: binding partner of ACD11 1 [Cucumis melo] >KAA0034401.1 binding partner of ACD11 1 [Cucumis melo var. makuwa] >TYK15522.1 binding partner of ACD11 1 [Cucumis melo var. makuwa])

HSP 1 Score: 377.9 bits (969), Expect = 5.9e-101
Identity = 194/207 (93.72%), Postives = 201/207 (97.10%), Query Frame = 0


Query: 7   LRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWSRPSGYHEE 66
           +RSG+DACTAYVTFKDAYSQETACLLSGA IVDQRVCITRWGHF+DEFGFWSRP G+ EE
Sbjct: 38  VRSGDDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEE 97

Query: 67  DSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAA 126
           DST ASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDT TKAKAFDESHQVSATAAA
Sbjct: 98  DSTSASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAA 157

Query: 127 KVADLSHRIGLTDMIGAGFEAVKTVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFS 186
           KVADLSHRIGLTDM+GAGFEAVK+VDEKYHVL+TTKSAISATGRTAAAAADTVVRSSYFS
Sbjct: 158 KVADLSHRIGLTDMLGAGFEAVKSVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFS 217

Query: 187 RGALFMSDALNRAAKVAADLGSRGLEH 214
           RGALFMSDALNRAAK AADLGSRGLEH
Sbjct: 218 RGALFMSDALNRAAKAAADLGSRGLEH 244

[Close]

BLAST of HG10015326 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-26
Identity = 77/202 (38.12%), Postives = 113/202 (55.94%), Query Frame = 0


Query: 15  TAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWSRPSGYHEEDSTPASAQ 74
           +AYVTFK+    ETA LLSGA+I DQ V I    ++       S P+  H E  +     
Sbjct: 43  SAYVTFKETQGAETAVLLSGASIADQSVIIELAPNY-------SPPAAPHAETQS----- 102

Query: 75  RSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHR 134
                S A + V  A++VV +MLA G++LGKD + KAKAFDE H  ++TA A VA L  +
Sbjct: 103 -----SGAESVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQK 162

Query: 135 IGLTDMIGAGF----EAVKTVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGAL 194
           IGL+  + AG     E +K VD+ + V + TKS  +A  +T ++A   V+++ Y   G  
Sbjct: 163 IGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVS 222

Query: 195 FMSDALNRAAKVAADLGSRGLE 213
           + + A NR A+ A ++G +  E
Sbjct: 223 WAAGAFNRVAQAAGEVGQKTKE 227

[Close]

BLAST of HG10015326 vs. ExPASy TrEMBL
Match: A0A0A0KSM6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604930 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.2e-102
Identity = 196/207 (94.69%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 7   LRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWSRPSGYHEE 66
           +RSGEDACTAYVTFKDAYSQETACLLSGA IVDQRVCITRWGHF+DEFGFWSRP G+ EE
Sbjct: 38  VRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEE 97

Query: 67  DSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAA 126
           DSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAA
Sbjct: 98  DSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAA 157

Query: 127 KVADLSHRIGLTDMIGAGFEAVKTVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFS 186
           KVADLSHRIGLTDM+GAG+EAVK+VDEKYHVL+TTKSAISATGRTAAAAADTVVRSSYFS
Sbjct: 158 KVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFS 217

Query: 187 RGALFMSDALNRAAKVAADLGSRGLEH 214
           RGALFMSDALNRAAK AADLGSRGLEH
Sbjct: 218 RGALFMSDALNRAAKAAADLGSRGLEH 244

[Close]

BLAST of HG10015326 vs. ExPASy TrEMBL
Match: A0A6J1JE77 (binding partner of ACD11 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486072 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 7.5e-102
Identity = 199/215 (92.56%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 3   GPAQL----RSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWS 62
           GP +L    RSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHF+DEFGFWS
Sbjct: 30  GPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWS 89

Query: 63  RPSGYHEEDSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESH 122
           RPSGYHEEDST ASAQRSQFISSAGNAVTMAQEVVKTML+MGYVLGKD LTKAK FDESH
Sbjct: 90  RPSGYHEEDST-ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESH 149

Query: 123 QVSATAAAKVADLSHRIGLTDMIGAGFEAVKTVDEKYHVLQTTKSAISATGRTAAAAADT 182
           QVSATAAAKVADLSHRIGLTDMIGAGFEAVKT+DEKYHVLQTTKSAISATGRTAAAAADT
Sbjct: 150 QVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGRTAAAAADT 209

Query: 183 VVRSSYFSRGALFMSDALNRAAKVAADLGSRGLEH 214
           VV+S YFSRGALF+SDALNRAAKVAADLGSRG+EH
Sbjct: 210 VVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH 243

[Close]

BLAST of HG10015326 vs. ExPASy TrEMBL
Match: A0A6J1H035 (binding partner of ACD11 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458806 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.7e-101
Identity = 198/215 (92.09%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 3   GPAQL----RSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWS 62
           GP +L    RSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHF+DEFGFWS
Sbjct: 30  GPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWS 89

Query: 63  RPSGYHEEDSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESH 122
           RPSGYHEEDST ASAQRSQFISSAGNAVTMAQEVVKTML+MGYVLGKD LTKAK FDESH
Sbjct: 90  RPSGYHEEDST-ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESH 149

Query: 123 QVSATAAAKVADLSHRIGLTDMIGAGFEAVKTVDEKYHVLQTTKSAISATGRTAAAAADT 182
           QVSATAAAKVADLSHRIGLTDMIGAGFEAVKT+D+KYHVLQTTKSAISATGRTAAAAADT
Sbjct: 150 QVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDDKYHVLQTTKSAISATGRTAAAAADT 209

Query: 183 VVRSSYFSRGALFMSDALNRAAKVAADLGSRGLEH 214
           VV+S YFSRGALF+SDALNRAAKVAADLGSRG+EH
Sbjct: 210 VVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH 243

[Close]

BLAST of HG10015326 vs. ExPASy TrEMBL
Match: A0A5D3CVI0 (Binding partner of ACD11 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00120 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.9e-101
Identity = 194/207 (93.72%), Postives = 201/207 (97.10%), Query Frame = 0


Query: 7   LRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWSRPSGYHEE 66
           +RSG+DACTAYVTFKDAYSQETACLLSGA IVDQRVCITRWGHF+DEFGFWSRP G+ EE
Sbjct: 38  VRSGDDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEE 97

Query: 67  DSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAA 126
           DST ASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDT TKAKAFDESHQVSATAAA
Sbjct: 98  DSTSASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAA 157

Query: 127 KVADLSHRIGLTDMIGAGFEAVKTVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFS 186
           KVADLSHRIGLTDM+GAGFEAVK+VDEKYHVL+TTKSAISATGRTAAAAADTVVRSSYFS
Sbjct: 158 KVADLSHRIGLTDMLGAGFEAVKSVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFS 217

Query: 187 RGALFMSDALNRAAKVAADLGSRGLEH 214
           RGALFMSDALNRAAK AADLGSRGLEH
Sbjct: 218 RGALFMSDALNRAAKAAADLGSRGLEH 244

[Close]

BLAST of HG10015326 vs. ExPASy TrEMBL
Match: A0A1S3BET5 (binding partner of ACD11 1 OS=Cucumis melo OX=3656 GN=LOC103489100 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.9e-101
Identity = 194/207 (93.72%), Postives = 201/207 (97.10%), Query Frame = 0


Query: 7   LRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWSRPSGYHEE 66
           +RSG+DACTAYVTFKDAYSQETACLLSGA IVDQRVCITRWGHF+DEFGFWSRP G+ EE
Sbjct: 38  VRSGDDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEE 97

Query: 67  DSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAA 126
           DST ASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDT TKAKAFDESHQVSATAAA
Sbjct: 98  DSTSASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAA 157

Query: 127 KVADLSHRIGLTDMIGAGFEAVKTVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFS 186
           KVADLSHRIGLTDM+GAGFEAVK+VDEKYHVL+TTKSAISATGRTAAAAADTVVRSSYFS
Sbjct: 158 KVADLSHRIGLTDMLGAGFEAVKSVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFS 217

Query: 187 RGALFMSDALNRAAKVAADLGSRGLEH 214
           RGALFMSDALNRAAK AADLGSRGLEH
Sbjct: 218 RGALFMSDALNRAAKAAADLGSRGLEH 244

[Close]

BLAST of HG10015326 vs. TAIR 10
Match: AT1G14340.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 251.9 bits (642), Expect = 4.5e-67
Identity = 136/205 (66.34%), Postives = 160/205 (78.05%), Query Frame = 0


Query: 7   LRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWSRPS-GYHE 66
           +RSGE ACTAYV FKD+YSQETA LL+GATI+DQRVCITRWG   +EF FW+  S G+ +
Sbjct: 39  VRSGEQACTAYVMFKDSYSQETAVLLTGATILDQRVCITRWGQHHEEFDFWNATSRGFED 98

Query: 67  EDSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAA 126
           E  +   AQRS+F  +AG AVT AQEVVK MLA G+VLGKD L+KAKAFDESH VSA A 
Sbjct: 99  ESDSQHYAQRSEF--NAGEAVTKAQEVVKIMLATGFVLGKDALSKAKAFDESHGVSAAAV 158

Query: 127 AKVADLSHRIGLTDMIGAGFEAVKTVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYF 186
           A+V+ L  RIGLTD I  G EAV+  D++YHV  T KSA+ ATGRTAAAAA +VV SSYF
Sbjct: 159 ARVSQLEQRIGLTDKIFTGLEAVRMTDQRYHVSDTAKSAVFATGRTAAAAATSVVNSSYF 218

Query: 187 SRGALFMSDALNRAAKVAADLGSRG 211
           S GAL++S AL RAAK A+DLG+RG
Sbjct: 219 SSGALWLSGALERAAKAASDLGTRG 241

[Close]

BLAST of HG10015326 vs. TAIR 10
Match: AT3G01210.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 171.8 bits (434), Expect = 6.0e-43
Identity = 104/210 (49.52%), Postives = 134/210 (63.81%), Query Frame = 0


Query: 12  DACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWSRPSGYHEEDSTPA 71
           DA TAYVTF+DAY+ + A LLSGATIVDQ V I+ +G +  E       +   EED +  
Sbjct: 43  DALTAYVTFRDAYALDMAVLLSGATIVDQTVWISVYGVYLHESN-----NLRQEEDYSVT 102

Query: 72  SAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADL 131
             +   F SS G A+T+AQ+VV+TMLA GYVL KD + KAKA DES + S+  A K+A++
Sbjct: 103 VTRSDAFASSPGEAITVAQQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEI 162

Query: 132 SHRIGLTDMIGAGFEAVKTVDEKYHVLQTTKSAI-----------SATGRTAAAAADTVV 191
           SH +GLT  I +  E V++ DEKYH    TKSA+           + TG+ AAAAA +VV
Sbjct: 163 SHYLGLTQNIQSSMELVRSADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVV 222

Query: 192 RSSYFSRGALFMSDALNRAAKVAADLGSRG 211
            S YF+ GAL+ SDAL RAAK AA +G  G
Sbjct: 223 NSRYFANGALWFSDALGRAAKAAAHIGGGG 247

[Close]

BLAST of HG10015326 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 127.9 bits (320), Expect = 9.9e-30
Identity = 80/202 (39.60%), Postives = 116/202 (57.43%), Query Frame = 0


Query: 16  AYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWSRPSGYHEEDSTPASAQR 75
           AYVTFKD    ETA LLSGATIVD  V ++    ++              E       + 
Sbjct: 45  AYVTFKDLQGAETAVLLSGATIVDSSVIVSMAPDYQ-----------LSPEALASLEPKD 104

Query: 76  SQFISSAGNAV-TMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHR 135
           S     AG++V   A++VV +MLA G++LGKD + KAK+ DE HQ+++TA+AKVA    +
Sbjct: 105 SNKSPKAGDSVLRKAEDVVSSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKK 164

Query: 136 IGLTDMIGAGF----EAVKTVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGAL 195
           IG TD I  G     E V+ VD+KY V + TKSAI+A  +T + A   ++++ Y   GA 
Sbjct: 165 IGFTDKINTGTVVVGEKVREVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGAT 224

Query: 196 FMSDALNRAAKVAADLGSRGLE 213
           +++ A N+ AK A ++G +  E
Sbjct: 225 WVTGAFNKVAKAAEEVGQKAKE 235

[Close]

BLAST of HG10015326 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 123.2 bits (308), Expect = 2.4e-28
Identity = 75/201 (37.31%), Postives = 113/201 (56.22%), Query Frame = 0


Query: 16  AYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWSRPSGYHEEDSTPASAQR 75
           AYVTFKD    ETA LL+G+TIVD  V +T    ++        P      +S   S + 
Sbjct: 45  AYVTFKDLQGAETAVLLTGSTIVDSSVTVTMSPDYQ------LPPDALASIESLKESNKS 104

Query: 76  SQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRI 135
           S       +    A++VV  M++ G+VLGKD + KAK+ DE HQ+++TA+A+V     RI
Sbjct: 105 SSPTREDVSVFRKAEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRI 164

Query: 136 GLTDMIGAG----FEAVKTVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALF 195
           G T+ I  G     E VK VD+K+ V + TKSAI+A  +T + A   ++++ Y   GA +
Sbjct: 165 GFTEKINTGTTVVSEKVKEVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATW 224

Query: 196 MSDALNRAAKVAADLGSRGLE 213
           ++ A NR +K A ++G +  E
Sbjct: 225 VTGAFNRVSKAAEEVGQKAKE 239

[Close]

BLAST of HG10015326 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 )

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-27
Identity = 77/202 (38.12%), Postives = 113/202 (55.94%), Query Frame = 0


Query: 15  TAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFEDEFGFWSRPSGYHEEDSTPASAQ 74
           +AYVTFK+    ETA LLSGA+I DQ V I    ++       S P+  H E  +     
Sbjct: 43  SAYVTFKETQGAETAVLLSGASIADQSVIIELAPNY-------SPPAAPHAETQS----- 102

Query: 75  RSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHR 134
                S A + V  A++VV +MLA G++LGKD + KAKAFDE H  ++TA A VA L  +
Sbjct: 103 -----SGAESVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQK 162

Query: 135 IGLTDMIGAGF----EAVKTVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGAL 194
           IGL+  + AG     E +K VD+ + V + TKS  +A  +T ++A   V+++ Y   G  
Sbjct: 163 IGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVS 222

Query: 195 FMSDALNRAAKVAADLGSRGLE 213
           + + A NR A+ A ++G +  E
Sbjct: 223 WAAGAFNRVAQAAGEVGQKTKE 227

The following BLAST results are available for this feature:

BLAST of HG10015326 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135186.1	2.4e-102	94.69	binding partner of ACD11 1 [Cucumis sativus] >KGN51899.1 hypothetical protein Cs...	[more]
XP_038892042.1	7.0e-102	94.20	binding partner of ACD11 1 [Benincasa hispida]	[more]
XP_022988849.1	1.6e-101	92.56	binding partner of ACD11 1-like [Cucurbita maxima] >XP_022988857.1 binding partn...	[more]
XP_022957393.1	3.5e-101	92.09	binding partner of ACD11 1-like [Cucurbita moschata] >XP_022957394.1 binding par...	[more]
XP_008446330.1	5.9e-101	93.72	PREDICTED: binding partner of ACD11 1 [Cucumis melo] >KAA0034401.1 binding partn...	[more]

BLAST of HG10015326 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	2.2e-26	38.12	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]

BLAST of HG10015326 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSM6	1.2e-102	94.69	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604930 PE=4 SV...	[more]
A0A6J1JE77	7.5e-102	92.56	binding partner of ACD11 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486072 PE=4...	[more]
A0A6J1H035	1.7e-101	92.09	binding partner of ACD11 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458806 PE...	[more]
A0A5D3CVI0	2.9e-101	93.72	Binding partner of ACD11 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BET5	2.9e-101	93.72	binding partner of ACD11 1 OS=Cucumis melo OX=3656 GN=LOC103489100 PE=4 SV=1	[more]

BLAST of HG10015326 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14340.1	4.5e-67	66.34	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G01210.1	6.0e-43	49.52	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	9.9e-30	39.60	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	2.4e-28	37.31	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.1	1.6e-27	38.12	binding partner of acd11 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 7..211
None	No IPR available	PANTHER	PTHR32343:SF26	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 7..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015326.1	HG10015326.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding