HG10015310 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10015310
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDYW_deaminase domain-containing protein
LocationChr02: 25661318 .. 25661743 (+)
RNA-Seq ExpressionHG10015310
SyntenyHG10015310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGGTTATGGTCAGAAGTGCCTTAAACTCGTTTCACTTATGAAACGAGAAGGAATTGTGCCTAATGAAGTCACATTCATTTATGTTCTTAGAGGTTGTAGTGTGGTCGGATTCTTCGATGAAGGTCGTTCACATTTTGACTTAATGAAAAGAGACCATGGCATTCAACCGCAGCTTGAGCACTATGGTTGTATGGTTGATTTATATAGTCGAGTAGGGCAATTAGATGAGGCTCTAAACTTCATCAACACCATGCCTCTTAAGCCACACGCGGGAGCTTGGGGAGCTTTGCTCAATGCCTGTAGAATGTACAAGAATATGGAGTTGGGCAAGTTTGCCTCGAGAAAACTGGTAGAGCTTGAAGCCAAGAATCACAGCGCCTACGTGCTATTATCAAACATCTACGCCGACACAAAGAACTAG

mRNA sequence

ATGAATGGTTATGGTCAGAAGTGCCTTAAACTCGTTTCACTTATGAAACGAGAAGGAATTGTGCCTAATGAAGTCACATTCATTTATGTTCTTAGAGGTTGTAGTGTGGTCGGATTCTTCGATGAAGGTCGTTCACATTTTGACTTAATGAAAAGAGACCATGGCATTCAACCGCAGCTTGAGCACTATGGTTGTATGGTTGATTTATATAGTCGAGTAGGGCAATTAGATGAGGCTCTAAACTTCATCAACACCATGCCTCTTAAGCCACACGCGGGAGCTTGGGGAGCTTTGCTCAATGCCTGTAGAATGTACAAGAATATGGAGTTGGGCAAGTTTGCCTCGAGAAAACTGGTAGAGCTTGAAGCCAAGAATCACAGCGCCTACGTGCTATTATCAAACATCTACGCCGACACAAAGAACTAG

Coding sequence (CDS)

ATGAATGGTTATGGTCAGAAGTGCCTTAAACTCGTTTCACTTATGAAACGAGAAGGAATTGTGCCTAATGAAGTCACATTCATTTATGTTCTTAGAGGTTGTAGTGTGGTCGGATTCTTCGATGAAGGTCGTTCACATTTTGACTTAATGAAAAGAGACCATGGCATTCAACCGCAGCTTGAGCACTATGGTTGTATGGTTGATTTATATAGTCGAGTAGGGCAATTAGATGAGGCTCTAAACTTCATCAACACCATGCCTCTTAAGCCACACGCGGGAGCTTGGGGAGCTTTGCTCAATGCCTGTAGAATGTACAAGAATATGGAGTTGGGCAAGTTTGCCTCGAGAAAACTGGTAGAGCTTGAAGCCAAGAATCACAGCGCCTACGTGCTATTATCAAACATCTACGCCGACACAAAGAACTAG

Protein sequence

MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQLEHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVELEAKNHSAYVLLSNIYADTKN
Homology
BLAST of HG10015310 vs. NCBI nr
Match: XP_038891785.1 (putative pentatricopeptide repeat-containing protein At5g40405 [Benincasa hispida])

HSP 1 Score: 268.5 bits (685), Expect = 3.3e-68
Identity = 126/141 (89.36%), Postives = 131/141 (92.91%), Query Frame = 0

Query: 1   MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQL 60
           MNGYGQKCL+L SLMKREGI PNE+TFI VLRGCSVVGF DEGRSHFD MKRDHGI+PQL
Sbjct: 321 MNGYGQKCLELFSLMKREGIAPNEITFISVLRGCSVVGFVDEGRSHFDSMKRDHGIEPQL 380

Query: 61  EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
           EHYGCMVDLY R G+LDEALNFINTMPLKPHAGAWGALLNACRMYKNMELG+FASRKLVE
Sbjct: 381 EHYGCMVDLYGRAGRLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLVE 440

Query: 121 LEAKNHSAYVLLSNIYADTKN 142
           LEAKN  AYVLLSNIYAD KN
Sbjct: 441 LEAKNQGAYVLLSNIYADMKN 461

BLAST of HG10015310 vs. NCBI nr
Match: KAA0034379.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK15540.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 261.2 bits (666), Expect = 5.3e-66
Identity = 120/141 (85.11%), Postives = 130/141 (92.20%), Query Frame = 0

Query: 1   MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQL 60
           MNGYGQKCL+L SLMKREGI PNE+TFI VL+GCSVVGF DEGRSHFD MKRDHGI+P+ 
Sbjct: 241 MNGYGQKCLELFSLMKREGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPKH 300

Query: 61  EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
           EHYGCMVDLY R G+L+EALNFINTMPLKPHAGAWGALLNACRMYKNMELG+FASRKL+E
Sbjct: 301 EHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIE 360

Query: 121 LEAKNHSAYVLLSNIYADTKN 142
           +E KNH AYVLLSNIYADT N
Sbjct: 361 VEGKNHGAYVLLSNIYADTGN 381

BLAST of HG10015310 vs. NCBI nr
Match: XP_008446300.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405 [Cucumis melo])

HSP 1 Score: 261.2 bits (666), Expect = 5.3e-66
Identity = 120/141 (85.11%), Postives = 130/141 (92.20%), Query Frame = 0

Query: 1   MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQL 60
           MNGYGQKCL+L SLMKREGI PNE+TFI VL+GCSVVGF DEGRSHFD MKRDHGI+P+ 
Sbjct: 320 MNGYGQKCLELFSLMKREGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPKH 379

Query: 61  EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
           EHYGCMVDLY R G+L+EALNFINTMPLKPHAGAWGALLNACRMYKNMELG+FASRKL+E
Sbjct: 380 EHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIE 439

Query: 121 LEAKNHSAYVLLSNIYADTKN 142
           +E KNH AYVLLSNIYADT N
Sbjct: 440 VEGKNHGAYVLLSNIYADTGN 460

BLAST of HG10015310 vs. NCBI nr
Match: XP_022968643.1 (putative pentatricopeptide repeat-containing protein At5g40405 [Cucurbita maxima])

HSP 1 Score: 258.8 bits (660), Expect = 2.6e-65
Identity = 120/141 (85.11%), Postives = 129/141 (91.49%), Query Frame = 0

Query: 1   MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQL 60
           MNGYG+KCL+L SLMKREGI PNE+TFI V+RGCSVVG  DEGR HFD MKRD+ I+PQL
Sbjct: 321 MNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLVDEGRLHFDSMKRDYDIEPQL 380

Query: 61  EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
           EHYGCMVDLY R G+LDEALNFINTMP+KPHAGAWGALLNACRMYKNMELG+ ASRKLVE
Sbjct: 381 EHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLNACRMYKNMELGEVASRKLVE 440

Query: 121 LEAKNHSAYVLLSNIYADTKN 142
           LEAKNH AYVLLSNIYADTKN
Sbjct: 441 LEAKNHGAYVLLSNIYADTKN 461

BLAST of HG10015310 vs. NCBI nr
Match: XP_004135465.1 (putative pentatricopeptide repeat-containing protein At5g40405 [Cucumis sativus])

HSP 1 Score: 258.1 bits (658), Expect = 4.5e-65
Identity = 118/141 (83.69%), Postives = 128/141 (90.78%), Query Frame = 0

Query: 1   MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQL 60
           MNGYGQKCL+L S MK EGI PNE+TFI VL+GCSVVGF DEGRSHFD MKRDHGI+P+L
Sbjct: 320 MNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRL 379

Query: 61  EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
           EHYGCMVDLY R G+L+EALNFINTMPLKPHAGAWGALLNACRMYKNMELG+FASRKL+E
Sbjct: 380 EHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIE 439

Query: 121 LEAKNHSAYVLLSNIYADTKN 142
           +E KNH AYV LSNIYADT N
Sbjct: 440 VEGKNHGAYVSLSNIYADTGN 460

BLAST of HG10015310 vs. ExPASy Swiss-Prot
Match: Q9FND7 (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H14 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.8e-53
Identity = 91/141 (64.54%), Postives = 118/141 (83.69%), Query Frame = 0

Query: 1   MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQL 60
           MNG+G+KCL+L SLMK++G+ PN VTF+ VLRGCSVVGF DEG+ HFD M+ + GI+PQL
Sbjct: 318 MNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQL 377

Query: 61  EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
           EHYGC+VDLY+R G+L++A++ I  MP+KPHA  W +LL+A RMYKN+ELG  AS+K++E
Sbjct: 378 EHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLE 437

Query: 121 LEAKNHSAYVLLSNIYADTKN 142
           LE  NH AYVLLSNIYAD+ +
Sbjct: 438 LETANHGAYVLLSNIYADSND 458

BLAST of HG10015310 vs. ExPASy Swiss-Prot
Match: O81767 (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 1.7e-35
Identity = 68/136 (50.00%), Postives = 97/136 (71.32%), Query Frame = 0

Query: 2   NGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQLE 61
           +G+G+K + L   M  EG+ P+ +TF+ +L  CS  G  DEG+  F++M+ D+GI P L+
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589

Query: 62  HYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVEL 121
           HYGCMVD+Y R GQL+ AL FI +M L+P A  WGALL+ACR++ N++LGK AS  L E+
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649

Query: 122 EAKNHSAYVLLSNIYA 138
           E ++   +VLLSN+YA
Sbjct: 650 EPEHVGYHVLLSNMYA 665

BLAST of HG10015310 vs. ExPASy Swiss-Prot
Match: Q9LND4 (Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E61 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-33
Identity = 67/138 (48.55%), Postives = 92/138 (66.67%), Query Frame = 0

Query: 1   MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQL 60
           +NG  ++ L     MK + +VPN VTF+ +L  CS  G   EG   F+ M RD+G+ P+ 
Sbjct: 390 INGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEE 449

Query: 61  EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
           EHY CMVDL  R G++ EA +FI+ MP+KP A AWGALL+ACR++K ++L    + KL+ 
Sbjct: 450 EHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLS 509

Query: 121 LEAKNHSAYVLLSNIYAD 139
           +E +  S YVLLSNIYAD
Sbjct: 510 MEPEKSSVYVLLSNIYAD 527

BLAST of HG10015310 vs. ExPASy Swiss-Prot
Match: Q5G1T1 (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.6e-33
Identity = 65/136 (47.79%), Postives = 88/136 (64.71%), Query Frame = 0

Query: 2   NGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQLE 61
           +G+  + L+  + M  EG+ PNEVT++ +L  CS VG   EG  HF+ M  DH I+P++E
Sbjct: 553 HGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKME 612

Query: 62  HYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVEL 121
           HY CMVDL  R G L +A  FINTMP +     W   L ACR++ N ELGK A+RK++EL
Sbjct: 613 HYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEL 672

Query: 122 EAKNHSAYVLLSNIYA 138
           +    +AY+ LSNIYA
Sbjct: 673 DPNEPAAYIQLSNIYA 688

BLAST of HG10015310 vs. ExPASy Swiss-Prot
Match: O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.1e-33
Identity = 66/137 (48.18%), Postives = 93/137 (67.88%), Query Frame = 0

Query: 1   MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQL 60
           M+G     L L + MK+E + PNEVTF+ VL GCS  G  +EG+  F  M  ++ I P+L
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481

Query: 61  EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
           EHYGCMVDL+ R   L EAL  I +MP+  +   WG+L++ACR++  +ELGKFA+++++E
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541

Query: 121 LEAKNHSAYVLLSNIYA 138
           LE  +  A VL+SNIYA
Sbjct: 542 LEPDHDGALVLMSNIYA 558

BLAST of HG10015310 vs. ExPASy TrEMBL
Match: A0A5A7SZ47 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00320 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.6e-66
Identity = 120/141 (85.11%), Postives = 130/141 (92.20%), Query Frame = 0

Query: 1   MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQL 60
           MNGYGQKCL+L SLMKREGI PNE+TFI VL+GCSVVGF DEGRSHFD MKRDHGI+P+ 
Sbjct: 241 MNGYGQKCLELFSLMKREGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPKH 300

Query: 61  EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
           EHYGCMVDLY R G+L+EALNFINTMPLKPHAGAWGALLNACRMYKNMELG+FASRKL+E
Sbjct: 301 EHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIE 360

Query: 121 LEAKNHSAYVLLSNIYADTKN 142
           +E KNH AYVLLSNIYADT N
Sbjct: 361 VEGKNHGAYVLLSNIYADTGN 381

BLAST of HG10015310 vs. ExPASy TrEMBL
Match: A0A1S3BFJ2 (putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucumis melo OX=3656 GN=LOC103489076 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.6e-66
Identity = 120/141 (85.11%), Postives = 130/141 (92.20%), Query Frame = 0

Query: 1   MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQL 60
           MNGYGQKCL+L SLMKREGI PNE+TFI VL+GCSVVGF DEGRSHFD MKRDHGI+P+ 
Sbjct: 320 MNGYGQKCLELFSLMKREGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPKH 379

Query: 61  EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
           EHYGCMVDLY R G+L+EALNFINTMPLKPHAGAWGALLNACRMYKNMELG+FASRKL+E
Sbjct: 380 EHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIE 439

Query: 121 LEAKNHSAYVLLSNIYADTKN 142
           +E KNH AYVLLSNIYADT N
Sbjct: 440 VEGKNHGAYVLLSNIYADTGN 460

BLAST of HG10015310 vs. ExPASy TrEMBL
Match: A0A6J1HYM9 (putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucurbita maxima OX=3661 GN=LOC111467805 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.3e-65
Identity = 120/141 (85.11%), Postives = 129/141 (91.49%), Query Frame = 0

Query: 1   MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQL 60
           MNGYG+KCL+L SLMKREGI PNE+TFI V+RGCSVVG  DEGR HFD MKRD+ I+PQL
Sbjct: 321 MNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLVDEGRLHFDSMKRDYDIEPQL 380

Query: 61  EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
           EHYGCMVDLY R G+LDEALNFINTMP+KPHAGAWGALLNACRMYKNMELG+ ASRKLVE
Sbjct: 381 EHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLNACRMYKNMELGEVASRKLVE 440

Query: 121 LEAKNHSAYVLLSNIYADTKN 142
           LEAKNH AYVLLSNIYADTKN
Sbjct: 441 LEAKNHGAYVLLSNIYADTKN 461

BLAST of HG10015310 vs. ExPASy TrEMBL
Match: A0A0A0KSJ7 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604190 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.2e-65
Identity = 118/141 (83.69%), Postives = 128/141 (90.78%), Query Frame = 0

Query: 1   MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQL 60
           MNGYGQKCL+L S MK EGI PNE+TFI VL+GCSVVGF DEGRSHFD MKRDHGI+P+L
Sbjct: 241 MNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRL 300

Query: 61  EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
           EHYGCMVDLY R G+L+EALNFINTMPLKPHAGAWGALLNACRMYKNMELG+FASRKL+E
Sbjct: 301 EHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIE 360

Query: 121 LEAKNHSAYVLLSNIYADTKN 142
           +E KNH AYV LSNIYADT N
Sbjct: 361 VEGKNHGAYVSLSNIYADTGN 381

BLAST of HG10015310 vs. ExPASy TrEMBL
Match: A0A6J1DA54 (putative pentatricopeptide repeat-containing protein At5g40405 OS=Momordica charantia OX=3673 GN=LOC111019070 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.9e-65
Identity = 118/141 (83.69%), Postives = 128/141 (90.78%), Query Frame = 0

Query: 1   MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQL 60
           MNGYG+KCL+L SLMK+EG  PNE+TFI ++RGCSVVG  DEGR HFD MKRD+GI+PQL
Sbjct: 321 MNGYGEKCLELFSLMKKEGAAPNEITFISIIRGCSVVGLVDEGRLHFDSMKRDYGIEPQL 380

Query: 61  EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
           EHYGCMVDLY R G+LDEALNFIN MPLKPHAGAWGALLNACRMYKNMELG+ ASRKLVE
Sbjct: 381 EHYGCMVDLYGRAGRLDEALNFINAMPLKPHAGAWGALLNACRMYKNMELGEVASRKLVE 440

Query: 121 LEAKNHSAYVLLSNIYADTKN 142
           LEAKNH AYVLLSNIYADTKN
Sbjct: 441 LEAKNHGAYVLLSNIYADTKN 461

BLAST of HG10015310 vs. TAIR 10
Match: AT5G40405.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 209.9 bits (533), Expect = 1.3e-54
Identity = 91/141 (64.54%), Postives = 118/141 (83.69%), Query Frame = 0

Query: 1   MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQL 60
           MNG+G+KCL+L SLMK++G+ PN VTF+ VLRGCSVVGF DEG+ HFD M+ + GI+PQL
Sbjct: 318 MNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQL 377

Query: 61  EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
           EHYGC+VDLY+R G+L++A++ I  MP+KPHA  W +LL+A RMYKN+ELG  AS+K++E
Sbjct: 378 EHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLE 437

Query: 121 LEAKNHSAYVLLSNIYADTKN 142
           LE  NH AYVLLSNIYAD+ +
Sbjct: 438 LETANHGAYVLLSNIYADSND 458

BLAST of HG10015310 vs. TAIR 10
Match: AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 1.2e-36
Identity = 68/136 (50.00%), Postives = 97/136 (71.32%), Query Frame = 0

Query: 2   NGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQLE 61
           +G+G+K + L   M  EG+ P+ +TF+ +L  CS  G  DEG+  F++M+ D+GI P L+
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589

Query: 62  HYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVEL 121
           HYGCMVD+Y R GQL+ AL FI +M L+P A  WGALL+ACR++ N++LGK AS  L E+
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649

Query: 122 EAKNHSAYVLLSNIYA 138
           E ++   +VLLSN+YA
Sbjct: 650 EPEHVGYHVLLSNMYA 665

BLAST of HG10015310 vs. TAIR 10
Match: AT1G06140.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 8.8e-35
Identity = 67/138 (48.55%), Postives = 92/138 (66.67%), Query Frame = 0

Query: 1   MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQL 60
           +NG  ++ L     MK + +VPN VTF+ +L  CS  G   EG   F+ M RD+G+ P+ 
Sbjct: 390 INGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEE 449

Query: 61  EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
           EHY CMVDL  R G++ EA +FI+ MP+KP A AWGALL+ACR++K ++L    + KL+ 
Sbjct: 450 EHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLS 509

Query: 121 LEAKNHSAYVLLSNIYAD 139
           +E +  S YVLLSNIYAD
Sbjct: 510 MEPEKSSVYVLLSNIYAD 527

BLAST of HG10015310 vs. TAIR 10
Match: AT3G49170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 2.6e-34
Identity = 65/136 (47.79%), Postives = 88/136 (64.71%), Query Frame = 0

Query: 2   NGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQLE 61
           +G+  + L+  + M  EG+ PNEVT++ +L  CS VG   EG  HF+ M  DH I+P++E
Sbjct: 553 HGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKME 612

Query: 62  HYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVEL 121
           HY CMVDL  R G L +A  FINTMP +     W   L ACR++ N ELGK A+RK++EL
Sbjct: 613 HYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEL 672

Query: 122 EAKNHSAYVLLSNIYA 138
           +    +AY+ LSNIYA
Sbjct: 673 DPNEPAAYIQLSNIYA 688

BLAST of HG10015310 vs. TAIR 10
Match: AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 5.7e-34
Identity = 66/137 (48.18%), Postives = 93/137 (67.88%), Query Frame = 0

Query: 1   MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDLMKRDHGIQPQL 60
           M+G     L L + MK+E + PNEVTF+ VL GCS  G  +EG+  F  M  ++ I P+L
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481

Query: 61  EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
           EHYGCMVDL+ R   L EAL  I +MP+  +   WG+L++ACR++  +ELGKFA+++++E
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541

Query: 121 LEAKNHSAYVLLSNIYA 138
           LE  +  A VL+SNIYA
Sbjct: 542 LEPDHDGALVLMSNIYA 558

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038891785.13.3e-6889.36putative pentatricopeptide repeat-containing protein At5g40405 [Benincasa hispid... [more]
KAA0034379.15.3e-6685.11putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] ... [more]
XP_008446300.15.3e-6685.11PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405 [Cucum... [more]
XP_022968643.12.6e-6585.11putative pentatricopeptide repeat-containing protein At5g40405 [Cucurbita maxima... [more]
XP_004135465.14.5e-6583.69putative pentatricopeptide repeat-containing protein At5g40405 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Q9FND71.8e-5364.54Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis th... [more]
O817671.7e-3550.00Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX... [more]
Q9LND41.2e-3348.55Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidop... [more]
Q5G1T13.6e-3347.79Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... [more]
O233378.1e-3348.18Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A5A7SZ472.6e-6685.11Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... [more]
A0A1S3BFJ22.6e-6685.11putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucumis melo O... [more]
A0A6J1HYM91.3e-6585.11putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucurbita maxi... [more]
A0A0A0KSJ72.2e-6583.69DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G6041... [more]
A0A6J1DA544.9e-6583.69putative pentatricopeptide repeat-containing protein At5g40405 OS=Momordica char... [more]
Match NameE-valueIdentityDescription
AT5G40405.11.3e-5464.54Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G33990.11.2e-3650.00Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G06140.18.8e-3548.55Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G49170.12.6e-3447.79Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G14820.15.7e-3448.18Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..141
e-value: 8.8E-28
score: 99.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 62..86
e-value: 0.0028
score: 17.8
coord: 25..53
e-value: 0.1
score: 12.9
NoneNo IPR availablePANTHERPTHR47928:SF82OS01G0715700 PROTEINcoord: 1..141
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 1..141

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10015310.1HG10015310.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding