HG10015302 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10015302
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat (PPR) superfamily protein
LocationChr02: 25624682 .. 25627363 (+)
RNA-Seq ExpressionHG10015302
SyntenyHG10015302
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGGTCTTCACCAACGCATTTCCCACTTATTATTTCTTCTTCCCAATTGAGTTTGGATATTTGAGCCCTTCCGTATCACCCTCCATTGCTTTTGTTCCTAACTTGAGAAAAAGAAATGTTGCTGAGCATGAGTCTGGAATTGAGTGTATGCTGAGTCGATTAGAAAAAGAAAGAAATGAGACCTTCGGAGCTAGAAAAAATGATTTGCATCCTGAAACAACAACAAAGGAGGTAAGCTTGCTGCAGTGATTCAAAGAATGACGTTCCCAATTTGAGGAAGGTCGTTCCATAATTAAAGGTGTAATAGAGATCATCCGGTTTCTTTCTGTCATATTAAGTACTCGTTAGAGTAACGAGGCTGAAAGATACATCTAGAATTGATTGCAGGATATCTTTCCCATTGGCTTGTCATCATTGGACGTGCTTGTGCTCTGCTTTATTTTTTGTTTTTTTCAACTTTAGTGTATGTATTACTCTCTAGTTAGAATTGGAAAAGGCTGAAACTTAACTTGTGACGCTTCTTGCATGGTAAAAGACAGTTGCTGACCTCCGAGGAAGCACTATCAACACGCCACGGAGTGCCAAACATGGAAAATGGAGCGATTTGGGGGGTTATCTTAGTCAGGTTTCTTCTCCTGTAAAAGTTATTGGTCTTGGAGGTTCTGTTAGTTCTGAGGTGCAGAGAACTTGGGACACATTCAAGACAGATCTTCAAGATGAAGATTTTGAAGGTTTAGGTTTCTGTGATATAAGTTCACATAGTCAAAAAAGGTATATCGGATGGTTCTGATTGCTGCATTTGGACTTTTGTTCCTACTTTGATTAGTACTTATGAGCACCTTAAGAAATATCGGAAAGCACCCAACAATTGCTTTGATCGATTCCTACATCACGCTCAAAGAGCTCAAACAAATCCACACCCAATTACTCATTAATGGCCTTTTTAATGATCGCCAACTTTTAGGCCAATTTGTTGCATCCATTGCCCTCAAAACCCCCACGAATCTATTGTATTCTAATCAAATTTTGGACCAATGTGCCGACCCAACCTTATTTGCCTTAAACTCCATGATCAGAGCCTATTCCAAAAGCTTAACCCCACACAAAGGCTTCCAGTTTTACAATAAAATTCTCCAATCCAATGATGTTATGTCACCAGACAATTACACTTTCAATTTTCTGGTTCGGACTTGTGCCCAATTGTCTGATTGTGAAGCAGGTCCAACTGTTCATGGTGCACTCATCAAACATGGTTTTGAATTTGACCCACATGTTCAAAGTGGGTTAATCTTTATGTATGCTGAAATGGGTTGTTTGAGTTCATGTTATCGTGTGTTTGAATCAGTTCAGGAGCCAGATATAGTCTGTCAGACGGCCATGGTGAGTGCTTGTGCAAAATGTGGTGATACTGATTTTGCACGAAACCTATTCGACTCAATGCCTCAGAGGGATTATGTGTCATGGAATGCTATGATTGCTGGTTATGCTCAAAGGGGGCAATCAAGGGAAGCTTTGAATCTATTTAAGCTTATGCAAATGGATGGTGTCAAGGTTAATGATGTGTCTATGGTTTCAGTTTTAACAGCCTGCACTCACTTGGGTGCACTAGACCAAGGGAAATGGGCACATGCTTATATAGACAGGAACAAGATTCGGATGACTGTCAATTTGGGTACTGCACTTGTTGATATGTATTTCAAATGTGGAAATGTTGATAAGGCCATGAAGGTTTTCTGGGAAATGAATGAAAAGAATGTTTATACCTGGAGTAGTGCAATAGGTGGGCTTGCCATGAATGGTTATGGCCAGAAGTGCCTTGAACTGTTTTCACTTATGAAACACGAAGGGATTGCCCCTAATGAAATCACATTCATTTCTGTTCTAAAAGGTTGTAGCATGGTTGGATTTGTCGATGAAGGTCGTTCACATTTTGACTCAATGATGAGAGACCATGGCATTGAACCGCAACTCGAGCACTATGGTTGTATGGTGGATTTATATGGTCGAGCGGGGCGATTAGATGAGGCTCTAAACTTCATCACCACCATGCCTCTTAAGCCACACGCGGGTGCTTGGGGAGCTTTGCTAAATGCCTGTAGAATGTACAAGAATATGGAGTTGGGGGAGTTTGCCTCGAGAAAACTGGTAGAGCTTGAAGCCAAGAATCACGGCGCCTACGTGCTGTTATCGAACATATATGCCGACACAAAGAACTGGGAAGGAGTAAGTAATGTGCGCCAATCCATGAAAGCTGAAGGCGTAAACAAACTCCCTGGTTGCAGTGTTATAGAGGTCAATGGAGAAGTTCATGAATTCTTTGTAGGTGACAAGTCCCACCCGAGTTACGATGCCATTGAAACAATGTGGGGAGAGATCTCTAAACGGCTGAAGTTATCAGGATATGTAGCAAATACTAACCCTGTTCTATTTGATGTAGAAGAAGAAGAAAAAGAAGATGCATTGTGTAAACATAGTGAGAAGATGGCCATTGCATTTGGGTTGATTAGTCTGAAGGAGGGGTTGCCCATTAGAATAGTGAAGAACCTTAGAGTTTGTTGGGATTGCCATGATGTTACAAAGATGATATCTAAAATTTTTGACAGGGAGATTATTGTGAGAGATAGGAACAGGTTTCACCATTTTAAAGATGGTGAGTGTTCTTGTAAGGATTTTTGGTGA

mRNA sequence

ATGCTGGTCTTCACCAACGCATTTCCCACTTATTATTTCTTCTTCCCAATTGAGTTTGGATATTTGAGCCCTTCCGTATCACCCTCCATTGCTTTTGTTCCTAACTTGAGAAAAAGAAATGTTGCTGAGCATGAGTCTGGAATTGAGTGTATGCTGAGTCGATTAGAAAAAGAAAGAAATGAGACCTTCGGAGCTAGAAAAAATGATTTGCATCCTGAAACAACAACAAAGGAGACAGTTGCTGACCTCCGAGGAAGCACTATCAACACGCCACGGAGTGCCAAACATGGAAAATGGAGCGATTTGGGGGGTTATCTTAGTCAGGTTTCTTCTCCTGTAAAAGTTATTGGTCTTGGAGGTTCTGTTAGTTCTGAGGTGCAGAGAACTTGGGACACATTCAAGACAGATCTTCAAGATGAAGATTTTGAAGGTTTAGGTTTCTGTGATATAAGTTCACATAGTCAAAAAAGTGTTATAGAGGTCAATGGAGAAGTTCATGAATTCTTTGTAGGTGACAAGTCCCACCCGAGTTACGATGCCATTGAAACAATGTGGGGAGAGATCTCTAAACGGCTGAAGTTATCAGGATATGTAGCAAATACTAACCCTGTTCTATTTGATGTAGAAGAAGAAGAAAAAGAAGATGCATTGTGTAAACATAGTGAGAAGATGGCCATTGCATTTGGGTTGATTAGTCTGAAGGAGGGGTTGCCCATTAGAATAGTGAAGAACCTTAGAGTTTGTTGGGATTGCCATGATGTTACAAAGATGATATCTAAAATTTTTGACAGGGAGATTATTGTGAGAGATAGGAACAGGTTTCACCATTTTAAAGATGGTGAGTGTTCTTGTAAGGATTTTTGGTGA

Coding sequence (CDS)

ATGCTGGTCTTCACCAACGCATTTCCCACTTATTATTTCTTCTTCCCAATTGAGTTTGGATATTTGAGCCCTTCCGTATCACCCTCCATTGCTTTTGTTCCTAACTTGAGAAAAAGAAATGTTGCTGAGCATGAGTCTGGAATTGAGTGTATGCTGAGTCGATTAGAAAAAGAAAGAAATGAGACCTTCGGAGCTAGAAAAAATGATTTGCATCCTGAAACAACAACAAAGGAGACAGTTGCTGACCTCCGAGGAAGCACTATCAACACGCCACGGAGTGCCAAACATGGAAAATGGAGCGATTTGGGGGGTTATCTTAGTCAGGTTTCTTCTCCTGTAAAAGTTATTGGTCTTGGAGGTTCTGTTAGTTCTGAGGTGCAGAGAACTTGGGACACATTCAAGACAGATCTTCAAGATGAAGATTTTGAAGGTTTAGGTTTCTGTGATATAAGTTCACATAGTCAAAAAAGTGTTATAGAGGTCAATGGAGAAGTTCATGAATTCTTTGTAGGTGACAAGTCCCACCCGAGTTACGATGCCATTGAAACAATGTGGGGAGAGATCTCTAAACGGCTGAAGTTATCAGGATATGTAGCAAATACTAACCCTGTTCTATTTGATGTAGAAGAAGAAGAAAAAGAAGATGCATTGTGTAAACATAGTGAGAAGATGGCCATTGCATTTGGGTTGATTAGTCTGAAGGAGGGGTTGCCCATTAGAATAGTGAAGAACCTTAGAGTTTGTTGGGATTGCCATGATGTTACAAAGATGATATCTAAAATTTTTGACAGGGAGATTATTGTGAGAGATAGGAACAGGTTTCACCATTTTAAAGATGGTGAGTGTTCTTGTAAGGATTTTTGGTGA

Protein sequence

MLVFTNAFPTYYFFFPIEFGYLSPSVSPSIAFVPNLRKRNVAEHESGIECMLSRLEKERNETFGARKNDLHPETTTKETVADLRGSTINTPRSAKHGKWSDLGGYLSQVSSPVKVIGLGGSVSSEVQRTWDTFKTDLQDEDFEGLGFCDISSHSQKSVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDALCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHHFKDGECSCKDFW
Homology
BLAST of HG10015302 vs. NCBI nr
Match: XP_022151045.1 (putative pentatricopeptide repeat-containing protein At5g40405 [Momordica charantia])

HSP 1 Score: 275.4 bits (703), Expect = 5.6e-70
Identity = 130/161 (80.75%), Postives = 140/161 (86.96%), Query Frame = 0

Query: 128 RTWDTFKTDLQDEDFEGLGFCDISSHSQKSVIEVNGEVHEFFVGDKSHPSYDAIETMWGE 187
           + W+      Q    EG     +S     SV+EVNGEVHEFFVGDKSHP+YDAIETMWG+
Sbjct: 460 KNWERVSNVRQSMKVEG-----VSKPPGCSVMEVNGEVHEFFVGDKSHPNYDAIETMWGD 519

Query: 188 ISKRLKLSGYVANTNPVLFDVEEEEKEDALCKHSEKMAIAFGLISLKEGLPIRIVKNLRV 247
           ISKRLKL+GYVANTNPVLFD+EEEEKEDALCKHSEKMAIAFGLISLKEGLPIRIVKNLRV
Sbjct: 520 ISKRLKLAGYVANTNPVLFDIEEEEKEDALCKHSEKMAIAFGLISLKEGLPIRIVKNLRV 579

Query: 248 CWDCHDVTKMISKIFDREIIVRDRNRFHHFKDGECSCKDFW 289
           CWDCHDVTKMISKIF+REIIVRDRNRFHHF+DGECSCKDFW
Sbjct: 580 CWDCHDVTKMISKIFNREIIVRDRNRFHHFRDGECSCKDFW 615

BLAST of HG10015302 vs. NCBI nr
Match: KAA0034379.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK15540.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 273.5 bits (698), Expect = 2.1e-69
Identity = 126/132 (95.45%), Postives = 131/132 (99.24%), Query Frame = 0

Query: 157 SVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDA 216
           SV+EVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKL+GYVA+TN VLFD+EEEEKEDA
Sbjct: 404 SVMEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDA 463

Query: 217 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 276
           LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIF+REIIVRDRNRFHH
Sbjct: 464 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFEREIIVRDRNRFHH 523

Query: 277 FKDGECSCKDFW 289
           FKDGECSCKDFW
Sbjct: 524 FKDGECSCKDFW 535

BLAST of HG10015302 vs. NCBI nr
Match: XP_008446300.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405 [Cucumis melo])

HSP 1 Score: 273.5 bits (698), Expect = 2.1e-69
Identity = 126/132 (95.45%), Postives = 131/132 (99.24%), Query Frame = 0

Query: 157 SVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDA 216
           SV+EVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKL+GYVA+TN VLFD+EEEEKEDA
Sbjct: 483 SVMEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDA 542

Query: 217 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 276
           LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIF+REIIVRDRNRFHH
Sbjct: 543 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFEREIIVRDRNRFHH 602

Query: 277 FKDGECSCKDFW 289
           FKDGECSCKDFW
Sbjct: 603 FKDGECSCKDFW 614

BLAST of HG10015302 vs. NCBI nr
Match: XP_038891785.1 (putative pentatricopeptide repeat-containing protein At5g40405 [Benincasa hispida])

HSP 1 Score: 273.1 bits (697), Expect = 2.8e-69
Identity = 125/132 (94.70%), Postives = 131/132 (99.24%), Query Frame = 0

Query: 157 SVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDA 216
           SV+EVNGEVHEFFVGDKSHPSY AIETMWGEIS++LKL+GYVANTNPVLFD+EEEEKEDA
Sbjct: 484 SVMEVNGEVHEFFVGDKSHPSYHAIETMWGEISQQLKLAGYVANTNPVLFDIEEEEKEDA 543

Query: 217 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 276
           LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH
Sbjct: 544 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 603

Query: 277 FKDGECSCKDFW 289
           FKDG+CSCKDFW
Sbjct: 604 FKDGDCSCKDFW 615

BLAST of HG10015302 vs. NCBI nr
Match: XP_004135465.1 (putative pentatricopeptide repeat-containing protein At5g40405 [Cucumis sativus])

HSP 1 Score: 267.3 bits (682), Expect = 1.5e-67
Identity = 140/208 (67.31%), Postives = 155/208 (74.52%), Query Frame = 0

Query: 85  GSTINTPRSAKHGKWSDLGGYLSQVSSPVKVIGLGGSVS-SEVQR---TWDTFKTDLQDE 144
           G+ +N  R  K+    +LG + S+    V+    G  VS S +      WD      Q  
Sbjct: 415 GALLNACRMYKN---MELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSM 474

Query: 145 DFEGLGFCDISSHSQKSVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVAN 204
             EG     IS     SV+EVNGEVHEFF GDKSHPSYD IETMWGEISKRLKL+GYVA+
Sbjct: 475 KAEG-----ISKLPGCSVMEVNGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVAS 534

Query: 205 TNPVLFDVEEEEKEDALCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISK 264
           TN VLFD+EEEEKEDALCKHSEKMAIAFGL SLKEGLPIRIVKNLR+CWDCHDV+KMISK
Sbjct: 535 TNSVLFDIEEEEKEDALCKHSEKMAIAFGLFSLKEGLPIRIVKNLRICWDCHDVSKMISK 594

Query: 265 IFDREIIVRDRNRFHHFKDGECSCKDFW 289
           IF+REIIVRDRNRFHHFKDGECSCKDFW
Sbjct: 595 IFEREIIVRDRNRFHHFKDGECSCKDFW 614

BLAST of HG10015302 vs. ExPASy Swiss-Prot
Match: Q9FND7 (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H14 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.5e-57
Identity = 100/132 (75.76%), Postives = 116/132 (87.88%), Query Frame = 0

Query: 157 SVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDA 216
           SV+EVNGEVHEFFVGDKSHP Y  I+ +W +IS+RL+L+GY A+T PV+FD++EEEKEDA
Sbjct: 481 SVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDA 540

Query: 217 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 276
           LC HSEK AIAFG++SLKE +PIRIVKNLRVC DCH V+ MISKIF+REIIVRDRNRFHH
Sbjct: 541 LCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHH 600

Query: 277 FKDGECSCKDFW 289
           FKDG CSC  FW
Sbjct: 601 FKDGHCSCNGFW 612

BLAST of HG10015302 vs. ExPASy Swiss-Prot
Match: Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.0e-42
Identity = 81/132 (61.36%), Postives = 98/132 (74.24%), Query Frame = 0

Query: 157 SVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDA 216
           S IE+  +VHEF  GD+ H     I TM  +IS+R+K  GYV NTN VL D+EE EKE +
Sbjct: 501 STIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQS 560

Query: 217 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 276
           L  HSE++AIA+GLIS K G P++I KNLRVC DCH VTK+ISKI  R+I++RDRNRFHH
Sbjct: 561 LQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHH 620

Query: 277 FKDGECSCKDFW 289
           F DG CSC DFW
Sbjct: 621 FTDGSCSCGDFW 632

BLAST of HG10015302 vs. ExPASy Swiss-Prot
Match: Q683I9 (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H82 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.9e-41
Identity = 78/132 (59.09%), Postives = 98/132 (74.24%), Query Frame = 0

Query: 157 SVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDA 216
           S +EV G VHEF VGD+S    + I  M  EI +RL+ +GYV +T  VL D+ E++KE A
Sbjct: 442 SYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIA 501

Query: 217 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 276
           L  HSEK+AIAF L+  + G P+RI+KNLR+C DCH V KMISK+F REI+VRD NRFHH
Sbjct: 502 LSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHH 561

Query: 277 FKDGECSCKDFW 289
           F+DG CSC+DFW
Sbjct: 562 FRDGSCSCRDFW 573

BLAST of HG10015302 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 170.6 bits (431), Expect = 2.5e-41
Identity = 78/132 (59.09%), Postives = 99/132 (75.00%), Query Frame = 0

Query: 157 SVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDA 216
           S++EV   VHEF +GDKSHP  DAI     E++ RL+  GYV   + V  DVEEEEKE+A
Sbjct: 464 SLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENA 523

Query: 217 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 276
           +  HSEK+AIAF LIS  E  PI +VKNLRVC DCH   K++SK+++REI+VRDR+RFHH
Sbjct: 524 VVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHH 583

Query: 277 FKDGECSCKDFW 289
           FK+G CSC+D+W
Sbjct: 584 FKNGSCSCQDYW 595

BLAST of HG10015302 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.3e-41
Identity = 77/132 (58.33%), Postives = 95/132 (71.97%), Query Frame = 0

Query: 157 SVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDA 216
           S +EV G +  F VGDKSHP Y+ IE     I  RLK  G+VAN +  L D+ +EE E+ 
Sbjct: 563 SWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEET 622

Query: 217 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 276
           LC HSE++AIA+GLIS  +G P+RI KNLR C +CH  TK+ISK+ DREI+VRD NRFHH
Sbjct: 623 LCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHH 682

Query: 277 FKDGECSCKDFW 289
           FKDG CSC D+W
Sbjct: 683 FKDGVCSCGDYW 694

BLAST of HG10015302 vs. ExPASy TrEMBL
Match: A0A6J1DA54 (putative pentatricopeptide repeat-containing protein At5g40405 OS=Momordica charantia OX=3673 GN=LOC111019070 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.7e-70
Identity = 130/161 (80.75%), Postives = 140/161 (86.96%), Query Frame = 0

Query: 128 RTWDTFKTDLQDEDFEGLGFCDISSHSQKSVIEVNGEVHEFFVGDKSHPSYDAIETMWGE 187
           + W+      Q    EG     +S     SV+EVNGEVHEFFVGDKSHP+YDAIETMWG+
Sbjct: 460 KNWERVSNVRQSMKVEG-----VSKPPGCSVMEVNGEVHEFFVGDKSHPNYDAIETMWGD 519

Query: 188 ISKRLKLSGYVANTNPVLFDVEEEEKEDALCKHSEKMAIAFGLISLKEGLPIRIVKNLRV 247
           ISKRLKL+GYVANTNPVLFD+EEEEKEDALCKHSEKMAIAFGLISLKEGLPIRIVKNLRV
Sbjct: 520 ISKRLKLAGYVANTNPVLFDIEEEEKEDALCKHSEKMAIAFGLISLKEGLPIRIVKNLRV 579

Query: 248 CWDCHDVTKMISKIFDREIIVRDRNRFHHFKDGECSCKDFW 289
           CWDCHDVTKMISKIF+REIIVRDRNRFHHF+DGECSCKDFW
Sbjct: 580 CWDCHDVTKMISKIFNREIIVRDRNRFHHFRDGECSCKDFW 615

BLAST of HG10015302 vs. ExPASy TrEMBL
Match: A0A5A7SZ47 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00320 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.0e-69
Identity = 126/132 (95.45%), Postives = 131/132 (99.24%), Query Frame = 0

Query: 157 SVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDA 216
           SV+EVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKL+GYVA+TN VLFD+EEEEKEDA
Sbjct: 404 SVMEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDA 463

Query: 217 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 276
           LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIF+REIIVRDRNRFHH
Sbjct: 464 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFEREIIVRDRNRFHH 523

Query: 277 FKDGECSCKDFW 289
           FKDGECSCKDFW
Sbjct: 524 FKDGECSCKDFW 535

BLAST of HG10015302 vs. ExPASy TrEMBL
Match: A0A1S3BFJ2 (putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucumis melo OX=3656 GN=LOC103489076 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.0e-69
Identity = 126/132 (95.45%), Postives = 131/132 (99.24%), Query Frame = 0

Query: 157 SVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDA 216
           SV+EVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKL+GYVA+TN VLFD+EEEEKEDA
Sbjct: 483 SVMEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDA 542

Query: 217 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 276
           LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIF+REIIVRDRNRFHH
Sbjct: 543 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFEREIIVRDRNRFHH 602

Query: 277 FKDGECSCKDFW 289
           FKDGECSCKDFW
Sbjct: 603 FKDGECSCKDFW 614

BLAST of HG10015302 vs. ExPASy TrEMBL
Match: A0A0A0KSJ7 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604190 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 7.4e-68
Identity = 140/208 (67.31%), Postives = 155/208 (74.52%), Query Frame = 0

Query: 85  GSTINTPRSAKHGKWSDLGGYLSQVSSPVKVIGLGGSVS-SEVQR---TWDTFKTDLQDE 144
           G+ +N  R  K+    +LG + S+    V+    G  VS S +      WD      Q  
Sbjct: 336 GALLNACRMYKN---MELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSM 395

Query: 145 DFEGLGFCDISSHSQKSVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVAN 204
             EG     IS     SV+EVNGEVHEFF GDKSHPSYD IETMWGEISKRLKL+GYVA+
Sbjct: 396 KAEG-----ISKLPGCSVMEVNGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVAS 455

Query: 205 TNPVLFDVEEEEKEDALCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISK 264
           TN VLFD+EEEEKEDALCKHSEKMAIAFGL SLKEGLPIRIVKNLR+CWDCHDV+KMISK
Sbjct: 456 TNSVLFDIEEEEKEDALCKHSEKMAIAFGLFSLKEGLPIRIVKNLRICWDCHDVSKMISK 515

Query: 265 IFDREIIVRDRNRFHHFKDGECSCKDFW 289
           IF+REIIVRDRNRFHHFKDGECSCKDFW
Sbjct: 516 IFEREIIVRDRNRFHHFKDGECSCKDFW 535

BLAST of HG10015302 vs. ExPASy TrEMBL
Match: A0A6J1FZH3 (putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucurbita moschata OX=3662 GN=LOC111449343 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.8e-67
Identity = 119/132 (90.15%), Postives = 130/132 (98.48%), Query Frame = 0

Query: 157 SVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDA 216
           SV+EVNGEVHEFFVGDKSHPSY AIE MWGEISKRLKL+GYVANTNPV+FDVEEEEKEDA
Sbjct: 484 SVMEVNGEVHEFFVGDKSHPSYKAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEKEDA 543

Query: 217 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 276
           LCKHSEKMAIAFGL+S++EGLPIR+VKNLRVCWDCHDVTKMISK+F+REII+RDRNRFHH
Sbjct: 544 LCKHSEKMAIAFGLMSVEEGLPIRVVKNLRVCWDCHDVTKMISKLFNREIIMRDRNRFHH 603

Query: 277 FKDGECSCKDFW 289
           F+DGECSCKDFW
Sbjct: 604 FRDGECSCKDFW 615

BLAST of HG10015302 vs. TAIR 10
Match: AT5G40405.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 223.8 bits (569), Expect = 1.8e-58
Identity = 100/132 (75.76%), Postives = 116/132 (87.88%), Query Frame = 0

Query: 157 SVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDA 216
           SV+EVNGEVHEFFVGDKSHP Y  I+ +W +IS+RL+L+GY A+T PV+FD++EEEKEDA
Sbjct: 481 SVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDA 540

Query: 217 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 276
           LC HSEK AIAFG++SLKE +PIRIVKNLRVC DCH V+ MISKIF+REIIVRDRNRFHH
Sbjct: 541 LCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHH 600

Query: 277 FKDGECSCKDFW 289
           FKDG CSC  FW
Sbjct: 601 FKDGHCSCNGFW 612

BLAST of HG10015302 vs. TAIR 10
Match: AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 173.7 bits (439), Expect = 2.1e-43
Identity = 81/132 (61.36%), Postives = 98/132 (74.24%), Query Frame = 0

Query: 157 SVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDA 216
           S IE+  +VHEF  GD+ H     I TM  +IS+R+K  GYV NTN VL D+EE EKE +
Sbjct: 501 STIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQS 560

Query: 217 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 276
           L  HSE++AIA+GLIS K G P++I KNLRVC DCH VTK+ISKI  R+I++RDRNRFHH
Sbjct: 561 LQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHH 620

Query: 277 FKDGECSCKDFW 289
           F DG CSC DFW
Sbjct: 621 FTDGSCSCGDFW 632

BLAST of HG10015302 vs. TAIR 10
Match: AT3G62890.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.4e-42
Identity = 78/132 (59.09%), Postives = 98/132 (74.24%), Query Frame = 0

Query: 157 SVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDA 216
           S +EV G VHEF VGD+S    + I  M  EI +RL+ +GYV +T  VL D+ E++KE A
Sbjct: 442 SYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIA 501

Query: 217 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 276
           L  HSEK+AIAF L+  + G P+RI+KNLR+C DCH V KMISK+F REI+VRD NRFHH
Sbjct: 502 LSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHH 561

Query: 277 FKDGECSCKDFW 289
           F+DG CSC+DFW
Sbjct: 562 FRDGSCSCRDFW 573

BLAST of HG10015302 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 170.6 bits (431), Expect = 1.8e-42
Identity = 78/132 (59.09%), Postives = 99/132 (75.00%), Query Frame = 0

Query: 157 SVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDA 216
           S++EV   VHEF +GDKSHP  DAI     E++ RL+  GYV   + V  DVEEEEKE+A
Sbjct: 464 SLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENA 523

Query: 217 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 276
           +  HSEK+AIAF LIS  E  PI +VKNLRVC DCH   K++SK+++REI+VRDR+RFHH
Sbjct: 524 VVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHH 583

Query: 277 FKDGECSCKDFW 289
           FK+G CSC+D+W
Sbjct: 584 FKNGSCSCQDYW 595

BLAST of HG10015302 vs. TAIR 10
Match: AT4G21065.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 170.6 bits (431), Expect = 1.8e-42
Identity = 78/132 (59.09%), Postives = 99/132 (75.00%), Query Frame = 0

Query: 157 SVIEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLSGYVANTNPVLFDVEEEEKEDA 216
           S++EV   VHEF +GDKSHP  DAI     E++ RL+  GYV   + V  DVEEEEKE+A
Sbjct: 331 SLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENA 390

Query: 217 LCKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHH 276
           +  HSEK+AIAF LIS  E  PI +VKNLRVC DCH   K++SK+++REI+VRDR+RFHH
Sbjct: 391 VVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHH 450

Query: 277 FKDGECSCKDFW 289
           FK+G CSC+D+W
Sbjct: 451 FKNGSCSCQDYW 462

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022151045.15.6e-7080.75putative pentatricopeptide repeat-containing protein At5g40405 [Momordica charan... [more]
KAA0034379.12.1e-6995.45putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] ... [more]
XP_008446300.12.1e-6995.45PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405 [Cucum... [more]
XP_038891785.12.8e-6994.70putative pentatricopeptide repeat-containing protein At5g40405 [Benincasa hispid... [more]
XP_004135465.11.5e-6767.31putative pentatricopeptide repeat-containing protein At5g40405 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Q9FND72.5e-5775.76Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis th... [more]
Q9SZT83.0e-4261.36Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... [more]
Q683I91.9e-4159.09Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX... [more]
A8MQA32.5e-4159.09Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... [more]
Q9LTV83.3e-4158.33Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1DA542.7e-7080.75putative pentatricopeptide repeat-containing protein At5g40405 OS=Momordica char... [more]
A0A5A7SZ471.0e-6995.45Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... [more]
A0A1S3BFJ21.0e-6995.45putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucumis melo O... [more]
A0A0A0KSJ77.4e-6867.31DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G6041... [more]
A0A6J1FZH32.8e-6790.15putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucurbita mosc... [more]
Match NameE-valueIdentityDescription
AT5G40405.11.8e-5875.76Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G37380.12.1e-4361.36Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G62890.11.4e-4259.09Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G21065.11.8e-4259.09Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G21065.21.8e-4259.09Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 156..278
e-value: 7.3E-42
score: 142.2
NoneNo IPR availablePANTHERPTHR47926:SF90SUBFAMILY NOT NAMEDcoord: 157..274
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 157..274

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10015302.1HG10015302.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding