HG10015268 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015268
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	DNA polymerase
Location	Chr02: 25307682 .. 25311765 (-)
RNA-Seq Expression	HG10015268
Synteny	HG10015268

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAATACAAAAGGGTCCAACTCAATCCGATCAAACGGTCCACTGGACGTGTAAGCGGACCCCACTTAGGACACTTGTCAAATTGATTGACGAATCATCATCTCACACTTGGACACGTGTCTTATCAAAGGTCAATCATAGTCAAAATACATATTTCGCTTTTATTATACATGATACACAAGATCACAGTCTCGTCTCGTGCAGAAGAAGCTTTAATGGCGCCAAAACGAAGGAAAACCCAAAATCTTTCTGAGGATCCACATGGAATGTTTGCAGGGATGGTTGTCTTCTTAGTGGAAAAGGGGGTGCAAGCCCGCCGTTTGCAGGTTTTACATTTCATTATCTTTCAGAAGTTGGTCCAAATGGGTGCTAGTATTGAAGAACGTTTATCGAAAATGGTCAGCCATATATTTGCTGCGAGCTCGGATGCTCTTCTACAGAAAGTGGACGGTAAGCGTTTGGCGCGCTTTAAAGGGGTGAGTCCTGTTTTTTTTGTCTGAAGCGTTCATTGATGGTAATTACAAATGTATATTCGTATATGGGTTCTGACACTGATGAACTTTGAGGCGATCGTTTGTGAATGATCATTGAAGTTTAAAGTGGTTTTTCTGAAGTGCATATAAGAAAAACTTGCATTCCTTTCTGGGGTTTTTTAAATTTATGAATTAGGCTGATTTCTGCACATTTTTAGAAGGTTCTCTCGTACCAGTGGCTGGAAGATAGCTTAAGTTCAGGGGAGAAGGCGTCAGAGGATTTGTACAGTGTAAAAGTGAGTTTAGATGAAGAAGGAAGAGATAAGCCCCAACCGTTTATTTCCAAAAAACTAAAATTGTCTCCCAACAATTCGGAAGCAGTAAGTTCTGAAAGTGGTGGAAATTCAGATGCTTCAACCTTAGTAACAAGGACTGCTACAGGTGTTGAGGACTCCAAATTGAGCATTGGTCAGACAGTAACTAGTCCAAGAACTTCTGATTCTATTGATAGCAACGTAAGTTTCTTTGATCGCCAATTCAAAGCTTGATGTTGAAATTTGTTTGTCCTGCTTTAGTTGTGAATTTGCTCATCTGTTTATAAATTAGGAATGTTTCATTGTAGACTTGTGGCTTGACCATGGAATTTTCTAGAAGTAGCTTCCAGTTTTCTTTGGACTGCTCACATCTGAATTAATCAGTGTGTTCTAATAAGGTGAAAGTTTTGCAGACATCTCTGTCATATAGTCCACCAGATATGAATAAGAATATAACTGAGATTTTTGGAAAACTTATCAACATATACAGAGGTGAGAATGGCATCCTTCAAACTACTTGATTGTTCCTGTTTCCACACTTAAATTTCTGATGGCTTGTCTTCTTTATACTTCAAGCATTGGGTGATGAACGAAGGTCATTTAGCTATTACAAGGCGATTCCAGTCATTGAGAAGCTACCTTTTAAAATTGAGAGCATTGATCAGGTCAAACACCTGCCGGCCATAGGAAAGTCATTGCAAGATCATGTGAGTGAAATGACTGCAGTTCGCTCTTTATTTTTCTCTTGAGGCATTGCATTATGTTGAATATTGCTTTTATTCACTCCAGTTCGCTCTTTCTTTTGGGTGGAATATGGTAATCTTTGTACTTATACAGTATATGGCCTCATAAGTTACCTGCAATCAATTTGTTTGTTCATAATATCATTCCCATAAAACCACTTGTCAGGAGTTAGGACTGGCCTTTTTTTGCTAGGTTAATTGCGAAACTTAGATACTTCCACCTCTGCAGGACTTATACAAAATCCATCTCAGCATGGGAGGATAGGACATGTCCTTGGGTGAATAATATGGTCCTAAATGCTTTGCAATTTGTATATGAATTATAATGTGGCTACAAAGAACTGTGTACACTATAAACTTCTATCTGAATGGATTGATTACAGAAGATTATTGTGCTTGCAGATTCAAGAGATAGTGACAACTGGAAAGCTATCAAAATTGGAGCACTTTGAGACGGATGAAAAGGTGTTTGCAGGTTTTTAAGAAAACCGCAGACCTTCCACTCTGATAAATATTTTTATTTTCATAAACATGCTTGTTCTTCTAGGTTGCAATGATTGATGCATGTATTTCTCTTTTTCCTTGTTTAAATGTTATAATGTGTTTTTAACCATTATAGGTTCGGACAATCTCACTGTTTGGGGAAGTATGGGGTATTGGCCCAGCCACAGCTTCGCGATTGTATGAGAAAGGATACAGGACACTCGATGACTTGCAAAAGGAGGAGTCATTAACTCATGCACAGAAATTGGGGTTGAAATATTTTGATGATATTAAACAAAGAATACCACGCAATGAGGTCGGCTGCTTTACTCTTGTGGATTTTGCAACAGTAACTGATCTTTTCAGTAAATATGTTCTCAGATTTCTGAAATCCATCTGGTTTGATAGGTTCAGGACATGGAGAGTCTTCTAAAGAAGGCTGGGGAAGATGTTTTACCAGGGGTGAGAACTGAACACCTCCTTGAAATCTGTATCTAAATAATATGGTTATTTGCTGATATTGTATTTGTGCTTGTACTTTCACGTGTTAATGCTATTATATCCCCCCCCCCCCCCCCCCCCCCCCCTCTCTTTGCTTTAGGTTGATATTCTATGTGGAGGATCATTTCGGCGAGGGAAGTTGTCCTGTGGAGATATGGACATTGTAATCACACATCCTGATGGGAAAAGGTTTCAGAGATTGCCCCTCGCTTTATTCACTTCTGTATTAGTACTTTTAAATCTTGTTTGAGTTGAATGTCCTGACTCTGATTGTGAAATGGGAAGATAAAGCAGGTCAATTGAGTGCATGTCCTGGAGCATCAAATTTTGGATTAAAAAATTAAATGGTATAAGCATGGGTTAAGGAGTTAGTTTTTCATCTCACCGTAAAGATCTCATTGCATTCGATTCCATTCCAATTGAAAGCTCTATGCTAGTTTTTGTATCAATATAATGCTACTGTCAGACTGAACCACTGTCCTGCAATTTGATTTTACATTTCTGATTTGGTTCATTTTCTTTATAGTTCCTTGAGAGTGTTATTTTCTCTGTGATTCCAGCCATAGAGGTTTCCTACCAAAATATGTGAAGCATTTAAAGGACATGAAGTTTTTAAGGGAGGATCTGATATTCAGCACGCATAGTGAGGAGGTCTAATTACCATTCCCCTCTGTTTAAACGGTTCCAAGATGCCATGATAGCTTTTTCTCAATCCCTTTGTTTATTTTCACTGTGGAACCATGAACAGGGAACCGATTCTGGTGTTGACACGTATTTCGGCCTTTGCACATACCCTGGAAGAGAATTGCGACACCGAATAGATCTTAAGGCATAAGTCCTCTTATTTCTAATCTGATCCTTCTTTGGCCACTTCTTATTTAGAATAGAATAGAAGGTTTTGTTACAAAAGTAGTGCTAACAGAACCTTATCCATGTTCAGCTAAGAACTGAAGTGGATGGTAAAAGAAACTCATGCCTGCTAATAAAATATGTCTGTTAGTTATGTTCATTCTTATTCTTTGGTGTTTAGGGTGGTTGTGTCTTAATCTGAATGGTACTGACGATGCGTGATTTCTTGGACATTAGTTTCTCTTATCACCTTATGATATAAGCTATGTATTAAACTCTTGTAGGTGTATCCAAGAGACATATATGCATTCGGATTGATAGCGTGGACTGGAAACGACGTACTAAATAGGAGGTATGGTCGTCTGTAGCTAAATCTATCTGTGTATTTCAACTAGTTTTCAACTTTGATTTGGTTGTGTGAGTGATAAGTAATTGAGATTATGTTTACAGACTGAGATTACTAGCAGAATCAAAAGGATTTAGGCTGGATGATACTGGACTTTATCCATCTACTCAGGGATCTGGTGGTAAAAGGGTAATGAACTTAACTTGGCTGTGAAGGAATATGGCCTTCAAATACAGGGCTGTCCCTAACTCCTTTCTTGTTGGTTATGCTGCAGAGTACCAGAGGAACCGCAACTTTGAAGTTTGACACTGAAAAAGAAGTTTTCGAGTTCCTTGGATTTCCATGGCTGGAACCTCATCAAAGGAATCTATGA

mRNA sequence

ATGGTAATACAAAAGGGTCCAACTCAATCCGATCAAACGGTCCACTGGACGTGTAAGCGGACCCCACTTAGGACACTTGTCAAATTGATTGACGAATCATCATCTCACACTTGGACACGTGTCTTATCAAAGAAGTTGGTCCAAATGGGTGCTAGTATTGAAGAACGTTTATCGAAAATGGTCAGCCATATATTTGCTGCGAGCTCGGATGCTCTTCTACAGAAAGTGGACGGTAAGCGTTTGGCGCGCTTTAAAGGGAAGGTTCTCTCGTACCAGTGGCTGGAAGATAGCTTAAGTTCAGGGGAGAAGGCGTCAGAGGATTTGTACAGTGTAAAAGTGAGTTTAGATGAAGAAGGAAGAGATAAGCCCCAACCGTTTATTTCCAAAAAACTAAAATTGTCTCCCAACAATTCGGAAGCAGTAAGTTCTGAAAGTGGTGGAAATTCAGATGCTTCAACCTTAGTAACAAGGACTGCTACAGGTGTTGAGGACTCCAAATTGAGCATTGGTCAGACAGTAACTAGTCCAAGAACTTCTGATTCTATTGATAGCAACACATCTCTGTCATATAGTCCACCAGATATGAATAAGAATATAACTGAGATTTTTGGAAAACTTATCAACATATACAGAGCATTGGGTGATGAACGAAGGTCATTTAGCTATTACAAGGCGATTCCAGTCATTGAGAAGCTACCTTTTAAAATTGAGAGCATTGATCAGGTCAAACACCTGCCGGCCATAGGAAAGTCATTGCAAGATCATATTCAAGAGATAGTGACAACTGGAAAGCTATCAAAATTGGAGCACTTTGAGACGGATGAAAAGGTTCGGACAATCTCACTGTTTGGGGAAGTATGGGGTATTGGCCCAGCCACAGCTTCGCGATTGTATGAGAAAGGATACAGGACACTCGATGACTTGCAAAAGGAGGAGTCATTAACTCATGCACAGAAATTGGGGTTGAAATATTTTGATGATATTAAACAAAGAATACCACGCAATGAGGTTCAGGACATGGAGAGTCTTCTAAAGAAGGCTGGGGAAGATGTTTTACCAGGGGTGTATCCAAGAGACATATATGCATTCGGATTGATAGCGTGGACTGGAAACGACGTACTAAATAGGAGACTGAGATTACTAGCAGAATCAAAAGGATTTAGGCTGGATGATACTGGACTTTATCCATCTACTCAGGGATCTGGTGGTAAAAGGAGTACCAGAGGAACCGCAACTTTGAAGTTTGACACTGAAAAAGAAGTTTTCGAGTTCCTTGGATTTCCATGGCTGGAACCTCATCAAAGGAATCTATGA

Coding sequence (CDS)

ATGGTAATACAAAAGGGTCCAACTCAATCCGATCAAACGGTCCACTGGACGTGTAAGCGGACCCCACTTAGGACACTTGTCAAATTGATTGACGAATCATCATCTCACACTTGGACACGTGTCTTATCAAAGAAGTTGGTCCAAATGGGTGCTAGTATTGAAGAACGTTTATCGAAAATGGTCAGCCATATATTTGCTGCGAGCTCGGATGCTCTTCTACAGAAAGTGGACGGTAAGCGTTTGGCGCGCTTTAAAGGGAAGGTTCTCTCGTACCAGTGGCTGGAAGATAGCTTAAGTTCAGGGGAGAAGGCGTCAGAGGATTTGTACAGTGTAAAAGTGAGTTTAGATGAAGAAGGAAGAGATAAGCCCCAACCGTTTATTTCCAAAAAACTAAAATTGTCTCCCAACAATTCGGAAGCAGTAAGTTCTGAAAGTGGTGGAAATTCAGATGCTTCAACCTTAGTAACAAGGACTGCTACAGGTGTTGAGGACTCCAAATTGAGCATTGGTCAGACAGTAACTAGTCCAAGAACTTCTGATTCTATTGATAGCAACACATCTCTGTCATATAGTCCACCAGATATGAATAAGAATATAACTGAGATTTTTGGAAAACTTATCAACATATACAGAGCATTGGGTGATGAACGAAGGTCATTTAGCTATTACAAGGCGATTCCAGTCATTGAGAAGCTACCTTTTAAAATTGAGAGCATTGATCAGGTCAAACACCTGCCGGCCATAGGAAAGTCATTGCAAGATCATATTCAAGAGATAGTGACAACTGGAAAGCTATCAAAATTGGAGCACTTTGAGACGGATGAAAAGGTTCGGACAATCTCACTGTTTGGGGAAGTATGGGGTATTGGCCCAGCCACAGCTTCGCGATTGTATGAGAAAGGATACAGGACACTCGATGACTTGCAAAAGGAGGAGTCATTAACTCATGCACAGAAATTGGGGTTGAAATATTTTGATGATATTAAACAAAGAATACCACGCAATGAGGTTCAGGACATGGAGAGTCTTCTAAAGAAGGCTGGGGAAGATGTTTTACCAGGGGTGTATCCAAGAGACATATATGCATTCGGATTGATAGCGTGGACTGGAAACGACGTACTAAATAGGAGACTGAGATTACTAGCAGAATCAAAAGGATTTAGGCTGGATGATACTGGACTTTATCCATCTACTCAGGGATCTGGTGGTAAAAGGAGTACCAGAGGAACCGCAACTTTGAAGTTTGACACTGAAAAAGAAGTTTTCGAGTTCCTTGGATTTCCATGGCTGGAACCTCATCAAAGGAATCTATGA

Protein sequence

MVIQKGPTQSDQTVHWTCKRTPLRTLVKLIDESSSHTWTRVLSKKLVQMGASIEERLSKMVSHIFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKPQPFISKKLKLSPNNSEAVSSESGGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSIDSNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYPSTQGSGGKRSTRGTATLKFDTEKEVFEFLGFPWLEPHQRNL

Homology

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BLAST of HG10015268 vs. NCBI nr
Match: XP_008446253.1 (PREDICTED: DNA polymerase beta isoform X1 [Cucumis melo] >XP_008446254.1 PREDICTED: DNA polymerase beta isoform X1 [Cucumis melo] >XP_008446255.1 PREDICTED: DNA polymerase beta isoform X1 [Cucumis melo])

HSP 1 Score: 685.6 bits (1768), Expect = 2.7e-193
Identity = 370/499 (74.15%), Postives = 388/499 (77.76%), Query Frame = 0


Query: 26  LVKLIDESSSHTWTRVLSKKLVQMGASIEERLSKMVSHIFAASSDALLQKVDGKRLARFK 85
           +V L+++       ++  +KLVQMGASIEERLSKMVSHIFA+SSDALL+KVD  RLARFK
Sbjct: 23  VVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSHIFASSSDALLEKVDSARLARFK 82

Query: 86  GKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKPQPFISKKLKLSPNNSEAVSSES 145
           GKVLSYQWLEDSLSSGEKASEDLY+VKV LDE+GRD PQ    KKLKLSPNNSEAVS ES
Sbjct: 83  GKVLSYQWLEDSLSSGEKASEDLYTVKVGLDEDGRDNPQQSTPKKLKLSPNNSEAVSFES 142

Query: 146 GGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSIDSNTSLSYSPPDMNKNITEIFGK 205
           GG+SDASTLVT+TATG+EDSKLSIGQTVTSPRTS S+ +NTSLSYSPPDMNKNITEIFGK
Sbjct: 143 GGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSASVGNNTSLSYSPPDMNKNITEIFGK 202

Query: 206 LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL 265
           LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL
Sbjct: 203 LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL 262

Query: 266 SKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYF 325
           SKLEHFETDEKVRTISLFGEVWGIGPATA RLYEKGYRTLDDLQKEESLTHAQKLGLKYF
Sbjct: 263 SKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYRTLDDLQKEESLTHAQKLGLKYF 322

Query: 326 DDIKQRIPRNEVQDMESLLKKAGEDVLPG------------------------------- 385
           DDIKQRIPRNEVQDME+LLKKAGEDVLPG                               
Sbjct: 323 DDIKQRIPRNEVQDMENLLKKAGEDVLPGVDILCGGSFRRGKSSCGDMDIVITHPDGKSH 382

Query: 386 --------------------------------------------------------VYPR 438
                                                                   VYPR
Sbjct: 383 RGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLCTYPGRELRHRIDLKVYPR 442

[Close]

BLAST of HG10015268 vs. NCBI nr
Match: XP_038892425.1 (DNA polymerase lambda isoform X1 [Benincasa hispida])

HSP 1 Score: 684.5 bits (1765), Expect = 6.0e-193
Identity = 370/499 (74.15%), Postives = 390/499 (78.16%), Query Frame = 0


Query: 26  LVKLIDESSSHTWTRVLSKKLVQMGASIEERLSKMVSHIFAASSDALLQKVDGKRLARFK 85
           +V L+++       ++  +KLVQMGASIEERLSKMVSHIFAASSDALLQKV+G RLARFK
Sbjct: 23  IVFLVEKGVQARRLQIWKQKLVQMGASIEERLSKMVSHIFAASSDALLQKVNGARLARFK 82

Query: 86  GKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKPQPFISKKLKLSPNNSEAVSSES 145
           GKVLSYQWLEDSLSSGEKASEDLY+VKV LDE+ RDKPQ FISKKLKLSPNNSEAVSSE+
Sbjct: 83  GKVLSYQWLEDSLSSGEKASEDLYTVKVRLDEDVRDKPQLFISKKLKLSPNNSEAVSSEN 142

Query: 146 GGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSIDSNTSLSYSPPDMNKNITEIFGK 205
           GG+SDASTLVT+TATG+EDSKLSI QTVTSPRTSDS +SNTSLSYSPPDMNKNITEIFGK
Sbjct: 143 GGDSDASTLVTKTATGLEDSKLSIDQTVTSPRTSDSKNSNTSLSYSPPDMNKNITEIFGK 202

Query: 206 LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL 265
           LINIYRALGDERRSFSYYKAIPVIEKLPFKIES D+VKHLPAIGKS QDHIQEIV+TGKL
Sbjct: 203 LINIYRALGDERRSFSYYKAIPVIEKLPFKIESSDRVKHLPAIGKSFQDHIQEIVSTGKL 262

Query: 266 SKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYF 325
           SKLEHFE DEKVRTISLFGEVWGIGPATA RLYEKGYRTLDDL+KEESLTHAQKLGLKYF
Sbjct: 263 SKLEHFEADEKVRTISLFGEVWGIGPATALRLYEKGYRTLDDLKKEESLTHAQKLGLKYF 322

Query: 326 DDIKQRIPRNEVQDMESLLKKAGEDVLPG------------------------------- 385
           DDIKQRIPRNEVQDMESLLKKAGEDVLPG                               
Sbjct: 323 DDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSFRRGKSSCGDMDIVITHPDGKSH 382

Query: 386 --------------------------------------------------------VYPR 438
                                                                   VYPR
Sbjct: 383 RGFLPKYIKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLCTYPGRELRHRIDLKVYPR 442

[Close]

BLAST of HG10015268 vs. NCBI nr
Match: XP_004135473.1 (DNA polymerase lambda isoform X1 [Cucumis sativus] >KGN51838.1 hypothetical protein Csa_008261 [Cucumis sativus])

HSP 1 Score: 681.8 bits (1758), Expect = 3.9e-192
Identity = 367/499 (73.55%), Postives = 387/499 (77.56%), Query Frame = 0


Query: 26  LVKLIDESSSHTWTRVLSKKLVQMGASIEERLSKMVSHIFAASSDALLQKVDGKRLARFK 85
           +V L+++       ++  +KLVQMGASIEERLSKMVSHIFA+S DALL+KVDG RLARFK
Sbjct: 23  VVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSHIFASSLDALLEKVDGARLARFK 82

Query: 86  GKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKPQPFISKKLKLSPNNSEAVSSES 145
           GKVLSYQWLEDSLSSGEKASEDLY+VKV LDE+GRDKPQ    KKL LSPNNSEAVS ES
Sbjct: 83  GKVLSYQWLEDSLSSGEKASEDLYTVKVGLDEDGRDKPQQSTPKKLNLSPNNSEAVSFES 142

Query: 146 GGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSIDSNTSLSYSPPDMNKNITEIFGK 205
           GG+SDASTLVT+TATG+EDSKLSIGQTVTSPRTSD + +N +LSYSPPDMNKNITEIFGK
Sbjct: 143 GGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSDFVGNNIALSYSPPDMNKNITEIFGK 202

Query: 206 LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL 265
           LINIYRALGDERRSFSYYKAIPVIEKLPF+IESIDQVKHLPAIGKSLQDHIQEIVTTGKL
Sbjct: 203 LINIYRALGDERRSFSYYKAIPVIEKLPFRIESIDQVKHLPAIGKSLQDHIQEIVTTGKL 262

Query: 266 SKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYF 325
           SKLEHFETDEKVRTISLFGEVWGIGPATA RLYEKGYRTLDDLQKEESLTHAQKLGLKYF
Sbjct: 263 SKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYRTLDDLQKEESLTHAQKLGLKYF 322

Query: 326 DDIKQRIPRNEVQDMESLLKKAGEDVLPG------------------------------- 385
           DDIKQRIPRNEVQDMESLLKKAGEDVLPG                               
Sbjct: 323 DDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSFRRGKSSCGDMDIVITHPDGKSH 382

Query: 386 --------------------------------------------------------VYPR 438
                                                                   VYPR
Sbjct: 383 RGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLCTYPGRELRHRIDLKVYPR 442

[Close]

BLAST of HG10015268 vs. NCBI nr
Match: XP_008446256.1 (PREDICTED: DNA polymerase beta isoform X2 [Cucumis melo])

HSP 1 Score: 679.5 bits (1752), Expect = 1.9e-191
Identity = 369/499 (73.95%), Postives = 387/499 (77.56%), Query Frame = 0


Query: 26  LVKLIDESSSHTWTRVLSKKLVQMGASIEERLSKMVSHIFAASSDALLQKVDGKRLARFK 85
           +V L+++       ++  +KLVQMGASIEERLSKMVSHIFA+SSDALL+KVD  RLARFK
Sbjct: 23  VVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSHIFASSSDALLEKVDSARLARFK 82

Query: 86  GKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKPQPFISKKLKLSPNNSEAVSSES 145
           G VLSYQWLEDSLSSGEKASEDLY+VKV LDE+GRD PQ    KKLKLSPNNSEAVS ES
Sbjct: 83  G-VLSYQWLEDSLSSGEKASEDLYTVKVGLDEDGRDNPQQSTPKKLKLSPNNSEAVSFES 142

Query: 146 GGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSIDSNTSLSYSPPDMNKNITEIFGK 205
           GG+SDASTLVT+TATG+EDSKLSIGQTVTSPRTS S+ +NTSLSYSPPDMNKNITEIFGK
Sbjct: 143 GGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSASVGNNTSLSYSPPDMNKNITEIFGK 202

Query: 206 LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL 265
           LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL
Sbjct: 203 LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL 262

Query: 266 SKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYF 325
           SKLEHFETDEKVRTISLFGEVWGIGPATA RLYEKGYRTLDDLQKEESLTHAQKLGLKYF
Sbjct: 263 SKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYRTLDDLQKEESLTHAQKLGLKYF 322

Query: 326 DDIKQRIPRNEVQDMESLLKKAGEDVLPG------------------------------- 385
           DDIKQRIPRNEVQDME+LLKKAGEDVLPG                               
Sbjct: 323 DDIKQRIPRNEVQDMENLLKKAGEDVLPGVDILCGGSFRRGKSSCGDMDIVITHPDGKSH 382

Query: 386 --------------------------------------------------------VYPR 438
                                                                   VYPR
Sbjct: 383 RGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLCTYPGRELRHRIDLKVYPR 442

[Close]

BLAST of HG10015268 vs. NCBI nr
Match: XP_038892426.1 (DNA polymerase lambda isoform X2 [Benincasa hispida])

HSP 1 Score: 678.3 bits (1749), Expect = 4.3e-191
Identity = 369/499 (73.95%), Postives = 389/499 (77.96%), Query Frame = 0


Query: 26  LVKLIDESSSHTWTRVLSKKLVQMGASIEERLSKMVSHIFAASSDALLQKVDGKRLARFK 85
           +V L+++       ++  +KLVQMGASIEERLSKMVSHIFAASSDALLQKV+G RLARFK
Sbjct: 23  IVFLVEKGVQARRLQIWKQKLVQMGASIEERLSKMVSHIFAASSDALLQKVNGARLARFK 82

Query: 86  GKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKPQPFISKKLKLSPNNSEAVSSES 145
           G VLSYQWLEDSLSSGEKASEDLY+VKV LDE+ RDKPQ FISKKLKLSPNNSEAVSSE+
Sbjct: 83  G-VLSYQWLEDSLSSGEKASEDLYTVKVRLDEDVRDKPQLFISKKLKLSPNNSEAVSSEN 142

Query: 146 GGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSIDSNTSLSYSPPDMNKNITEIFGK 205
           GG+SDASTLVT+TATG+EDSKLSI QTVTSPRTSDS +SNTSLSYSPPDMNKNITEIFGK
Sbjct: 143 GGDSDASTLVTKTATGLEDSKLSIDQTVTSPRTSDSKNSNTSLSYSPPDMNKNITEIFGK 202

Query: 206 LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL 265
           LINIYRALGDERRSFSYYKAIPVIEKLPFKIES D+VKHLPAIGKS QDHIQEIV+TGKL
Sbjct: 203 LINIYRALGDERRSFSYYKAIPVIEKLPFKIESSDRVKHLPAIGKSFQDHIQEIVSTGKL 262

Query: 266 SKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYF 325
           SKLEHFE DEKVRTISLFGEVWGIGPATA RLYEKGYRTLDDL+KEESLTHAQKLGLKYF
Sbjct: 263 SKLEHFEADEKVRTISLFGEVWGIGPATALRLYEKGYRTLDDLKKEESLTHAQKLGLKYF 322

Query: 326 DDIKQRIPRNEVQDMESLLKKAGEDVLPG------------------------------- 385
           DDIKQRIPRNEVQDMESLLKKAGEDVLPG                               
Sbjct: 323 DDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSFRRGKSSCGDMDIVITHPDGKSH 382

Query: 386 --------------------------------------------------------VYPR 438
                                                                   VYPR
Sbjct: 383 RGFLPKYIKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLCTYPGRELRHRIDLKVYPR 442

[Close]

BLAST of HG10015268 vs. ExPASy Swiss-Prot
Match: Q9FNY4 (DNA polymerase lambda OS=Arabidopsis thaliana OX=3702 GN=POLL PE=1 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 1.5e-130
Identity = 263/498 (52.81%), Postives = 322/498 (64.66%), Query Frame = 0


Query: 40  RVLSKKLVQMGASIEE-RLSKMVSHIFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSL 99
           ++  +KLVQMGA IEE R++K V+H+ A + +ALL K   +RL+ F  +++ YQWLEDSL
Sbjct: 37  QIWKQKLVQMGAVIEEDRVTKKVTHVLAMNLEALLHKFGKERLSHFTARLMLYQWLEDSL 96

Query: 100 SSGEKASEDLYSVKVSLDEEGRDKPQ---PFIS---------KKLKLSPNNSEAVSSESG 159
           +SGEKA+EDLY +K+  D E  DKP+   P IS         K+ + SP+  +    ES 
Sbjct: 97  TSGEKANEDLYVLKI--DSEEVDKPKKSLPAISGSEDQSSPQKRTRYSPDAGDFKGVESH 156

Query: 160 GNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSIDSNTSLSYSPPDMNKNITEIFGKL 219
            N+  S   + T+  V  +  S G+ +    TS   +S +   Y PPD+N+NITEIFGKL
Sbjct: 157 SNTQGSP-DSPTSCSVPSTSASPGEGIAETPTSPQSESTS--VYKPPDLNRNITEIFGKL 216

Query: 220 INIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKLS 279
           INIYRALG++RRSFSYYKAIPVIEK P +IES+DQ+KHLP IGK+++DHIQEIVTTGKLS
Sbjct: 217 INIYRALGEDRRSFSYYKAIPVIEKFPTRIESVDQLKHLPGIGKAMRDHIQEIVTTGKLS 276

Query: 280 KLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYFD 339
           KLEHFETDEKVRTISLFGEVWG+GPATA +LYEKG+RTL+DL+ E+SLTHAQKLGLKYFD
Sbjct: 277 KLEHFETDEKVRTISLFGEVWGVGPATALKLYEKGHRTLEDLKNEDSLTHAQKLGLKYFD 336

Query: 340 DIKQRIPRNEVQDMESLLKKAGEDVLPG-------------------------------- 399
           DIK RIPR EVQ+ME LL++ GE+ LPG                                
Sbjct: 337 DIKTRIPRQEVQEMEQLLQRVGEETLPGVNIVCGGSYRRGKATCGDLDIVVTHPDGQSHK 396

Query: 400 -------------------------------------------------------VYPRD 438
                                                                  VYPRD
Sbjct: 397 GFLTKFVKRLKEMNFLREDLIFSTHSEEGTDSGVDTYFGLCTYPGQELRRRIDFKVYPRD 456

[Close]

BLAST of HG10015268 vs. ExPASy Swiss-Prot
Match: Q67VC8 (DNA polymerase lambda OS=Oryza sativa subsp. japonica OX=39947 GN=POLL PE=1 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 9.6e-117
Identity = 239/511 (46.77%), Postives = 310/511 (60.67%), Query Frame = 0


Query: 41  VLSKKLVQMGASIEERLSK-----MVSHIFAASSDALLQKVDGKRLARFKGKVLSYQWLE 100
           V  ++L QMG  ++E+L+       V+H+ AA + ALL+++D   L RF+G V+S++WLE
Sbjct: 41  VWKQRLAQMGGRVQEKLAAKGGGGAVTHVLAADAKALLRELDAAWLHRFRGSVVSFEWLE 100

Query: 101 DSLSSGEKASEDLYSVKVSLDEEGRDKPQPFI--------SKKLKLSPNNSEAVSSESGG 160
           + L SGE+  E  ++  ++ +EE + K +           +K+ K+S +  E     +GG
Sbjct: 101 ECLKSGERLPEHKFA--INYEEEFKPKKEGGAAGSGVLQSAKRSKISSDGPENRKETAGG 160

Query: 161 NSDASTLVTR------------TATGVEDSKLSIGQTVTSPRT--SDSIDSNTSLSYSPP 220
           N ++   +              T T  + +     +T+ S     ++   S  S +Y+PP
Sbjct: 161 NRESRDAIAHPNEDSDVVKGPSTCTSSQSASGDSKETIASQNAFKAEEASSGESSTYAPP 220

Query: 221 DMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQ 280
           D+N+NITEIFGKLINIYRALGD+RRSFSYYKAIPVIEKLPFKIES DQVK LPAIGKSL+
Sbjct: 221 DLNRNITEIFGKLINIYRALGDDRRSFSYYKAIPVIEKLPFKIESADQVKDLPAIGKSLK 280

Query: 281 DHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQKEES 340
           DHI EIV TGKLSKLEHFE DEKVRT+SLFGEVWG+GPATA +LY+KG+RTLDDLQK++S
Sbjct: 281 DHINEIVNTGKLSKLEHFENDEKVRTVSLFGEVWGVGPATALKLYDKGHRTLDDLQKDDS 340

Query: 341 LTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPG------------------- 400
           LT AQ++GLK+FDDIKQRIPR+EV +ME LL++ G D+LPG                   
Sbjct: 341 LTSAQRIGLKFFDDIKQRIPRHEVSEMEKLLQEVGTDILPGVIIVCGGSYRRGKSSCGDM 400

Query: 401 ------------------------------------------------------------ 438
                                                                       
Sbjct: 401 DIIITHPDGESHVGFLPKFVQRLKGINFLREDLIFSIHSIEGTDCGVDTYFGLCTYPGRE 460

[Close]

BLAST of HG10015268 vs. ExPASy Swiss-Prot
Match: Q6DRD3 (DNA polymerase beta OS=Danio rerio OX=7955 GN=polb PE=2 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 2.2e-28
Identity = 93/333 (27.93%), Postives = 146/333 (43.84%), Query Frame = 0


Query: 195 MNKNITEIFGKLINIYRALGDERRSF-SYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQ 254
           +N+ IT+   +L N  R +      + +Y KA  VI K P KI+S  + K L  +G  + 
Sbjct: 10  LNEGITDFLVELANYERNVNRAIHKYNAYRKAASVIAKYPQKIKSGTEAKKLDGVGAKIA 69

Query: 255 DHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQK-EE 314
           + I E +TTGKL KLE    D+   +I+    V GIGPA A + +++G R L+DL+K E 
Sbjct: 70  EKIDEFLTTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFDEGVRNLEDLKKIEH 129

Query: 315 SLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLP-------GVY--------- 374
            L H Q++GLKYF++ ++RIPR+E+Q ME+L+ K  + V P       G Y         
Sbjct: 130 KLNHHQQIGLKYFEEFEKRIPRSEMQKMEALILKELDIVDPEYIGTICGSYRRGAESSGD 189

Query: 375 ------------------------------------------------------------ 434
                                                                       
Sbjct: 190 IDILLTHPDFTSQSEKQPKLLHAVVDHLESIGFITDTLSKGDTKFMGVCQLQKEKEEEEE 249

Query: 435 ------------PRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP-STQGSGG 437
                       P+D Y  G++ +TG+D+ N+ +R  A  KGF L++  + P    G  G
Sbjct: 250 ESLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIRPLGVTGVAG 309

[Close]

BLAST of HG10015268 vs. ExPASy Swiss-Prot
Match: Q27958 (DNA polymerase beta OS=Bos taurus OX=9913 GN=POLB PE=2 SV=3)

HSP 1 Score: 122.9 bits (307), Expect = 9.2e-27
Identity = 88/331 (26.59%), Postives = 144/331 (43.50%), Query Frame = 0


Query: 195 MNKNITEIFGKLINIYRALGDERRSF-SYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQ 254
           +N  IT++  +L N  + +      + +Y KA  VI K P KI+S  + K LP +G  + 
Sbjct: 11  LNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIA 70

Query: 255 DHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQK-EE 314
           + I E + TGKL KLE    D+   +I+    V GIGP+ A +  ++G +TL+DL+K E+
Sbjct: 71  EKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNED 130

Query: 315 SLTHAQKLGLKYFDDIKQRIPRNEVQDMESL----LKKA--------------------- 374
            L H Q++GLKYF+D ++RIPR E+  M+ +    +KK                      
Sbjct: 131 KLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLSEVKKVDSEYIATVCGSFRRGAESSGD 190

Query: 375 ----------------------------------------GEDVLPGV------------ 434
                                                   GE    GV            
Sbjct: 191 MDVLLTHPSFTSESAKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPSKNDEKEY 250

Query: 435 ---------YPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP-STQGSGGKR 437
                     P+D Y  G++ +TG+D+ N+ +R  A  KGF +++  + P    G  G+ 
Sbjct: 251 PHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGE- 310

[Close]

BLAST of HG10015268 vs. ExPASy Swiss-Prot
Match: O57383 (DNA polymerase beta OS=Xenopus laevis OX=8355 GN=polb PE=1 SV=3)

HSP 1 Score: 122.9 bits (307), Expect = 9.2e-27
Identity = 90/329 (27.36%), Postives = 140/329 (42.55%), Query Frame = 0


Query: 196 NKNITEIFGKLINIYRALGDERRSF-SYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQD 255
           N+ IT+   +L N  R +      + +Y KA  VI K P KI+S  + K L  +G  + +
Sbjct: 12  NEGITDFLVELANYERNVNRAIHKYNAYRKAASVIAKYPTKIKSGTEAKKLDGVGAKIAE 71

Query: 256 HIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQ-KEES 315
            I E + TGKL KLE    D+   +I+    V GIGPA A + +++G +TLDDL+  E  
Sbjct: 72  KIDEFLATGKLRKLEKIRQDDTSSSINFLTRVTGIGPAAARKFFDEGIKTLDDLRNNEHK 131

Query: 316 LTHAQKLGLKYFDDIKQRIPRNEVQDMESLL----------------------------- 375
           L H QK+GLK+FDD ++RIPR E+  M+ ++                             
Sbjct: 132 LNHHQKIGLKHFDDFEKRIPRKEMLQMQEIILDKVNNLDPEYIATVCGSFRRGAESSGDM 191

Query: 376 ------------------------------------------KKAGEDVLP--------- 435
                                                     K  G   LP         
Sbjct: 192 DILLTHPDFTSESAKQPRLLHQVVQCLEDCNFITDTLVKGDTKFMGVCQLPCESDQDYPY 251

Query: 436 -----GVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP-STQGSGGKRST 437
                 + P+D Y  G++ +TG+D+ N+ +R  A  KGF L++  L P    G  G+   
Sbjct: 252 RRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTLRPLGVTGIAGE--- 311

[Close]

BLAST of HG10015268 vs. ExPASy TrEMBL
Match: A0A1S3BE44 (DNA polymerase OS=Cucumis melo OX=3656 GN=LOC103489040 PE=3 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 1.3e-193
Identity = 370/499 (74.15%), Postives = 388/499 (77.76%), Query Frame = 0


Query: 26  LVKLIDESSSHTWTRVLSKKLVQMGASIEERLSKMVSHIFAASSDALLQKVDGKRLARFK 85
           +V L+++       ++  +KLVQMGASIEERLSKMVSHIFA+SSDALL+KVD  RLARFK
Sbjct: 23  VVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSHIFASSSDALLEKVDSARLARFK 82

Query: 86  GKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKPQPFISKKLKLSPNNSEAVSSES 145
           GKVLSYQWLEDSLSSGEKASEDLY+VKV LDE+GRD PQ    KKLKLSPNNSEAVS ES
Sbjct: 83  GKVLSYQWLEDSLSSGEKASEDLYTVKVGLDEDGRDNPQQSTPKKLKLSPNNSEAVSFES 142

Query: 146 GGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSIDSNTSLSYSPPDMNKNITEIFGK 205
           GG+SDASTLVT+TATG+EDSKLSIGQTVTSPRTS S+ +NTSLSYSPPDMNKNITEIFGK
Sbjct: 143 GGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSASVGNNTSLSYSPPDMNKNITEIFGK 202

Query: 206 LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL 265
           LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL
Sbjct: 203 LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL 262

Query: 266 SKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYF 325
           SKLEHFETDEKVRTISLFGEVWGIGPATA RLYEKGYRTLDDLQKEESLTHAQKLGLKYF
Sbjct: 263 SKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYRTLDDLQKEESLTHAQKLGLKYF 322

Query: 326 DDIKQRIPRNEVQDMESLLKKAGEDVLPG------------------------------- 385
           DDIKQRIPRNEVQDME+LLKKAGEDVLPG                               
Sbjct: 323 DDIKQRIPRNEVQDMENLLKKAGEDVLPGVDILCGGSFRRGKSSCGDMDIVITHPDGKSH 382

Query: 386 --------------------------------------------------------VYPR 438
                                                                   VYPR
Sbjct: 383 RGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLCTYPGRELRHRIDLKVYPR 442

[Close]

BLAST of HG10015268 vs. ExPASy TrEMBL
Match: A0A0A0KQD3 (DNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G603350 PE=3 SV=1)

HSP 1 Score: 681.8 bits (1758), Expect = 1.9e-192
Identity = 367/499 (73.55%), Postives = 387/499 (77.56%), Query Frame = 0


Query: 26  LVKLIDESSSHTWTRVLSKKLVQMGASIEERLSKMVSHIFAASSDALLQKVDGKRLARFK 85
           +V L+++       ++  +KLVQMGASIEERLSKMVSHIFA+S DALL+KVDG RLARFK
Sbjct: 23  VVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSHIFASSLDALLEKVDGARLARFK 82

Query: 86  GKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKPQPFISKKLKLSPNNSEAVSSES 145
           GKVLSYQWLEDSLSSGEKASEDLY+VKV LDE+GRDKPQ    KKL LSPNNSEAVS ES
Sbjct: 83  GKVLSYQWLEDSLSSGEKASEDLYTVKVGLDEDGRDKPQQSTPKKLNLSPNNSEAVSFES 142

Query: 146 GGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSIDSNTSLSYSPPDMNKNITEIFGK 205
           GG+SDASTLVT+TATG+EDSKLSIGQTVTSPRTSD + +N +LSYSPPDMNKNITEIFGK
Sbjct: 143 GGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSDFVGNNIALSYSPPDMNKNITEIFGK 202

Query: 206 LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL 265
           LINIYRALGDERRSFSYYKAIPVIEKLPF+IESIDQVKHLPAIGKSLQDHIQEIVTTGKL
Sbjct: 203 LINIYRALGDERRSFSYYKAIPVIEKLPFRIESIDQVKHLPAIGKSLQDHIQEIVTTGKL 262

Query: 266 SKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYF 325
           SKLEHFETDEKVRTISLFGEVWGIGPATA RLYEKGYRTLDDLQKEESLTHAQKLGLKYF
Sbjct: 263 SKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYRTLDDLQKEESLTHAQKLGLKYF 322

Query: 326 DDIKQRIPRNEVQDMESLLKKAGEDVLPG------------------------------- 385
           DDIKQRIPRNEVQDMESLLKKAGEDVLPG                               
Sbjct: 323 DDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSFRRGKSSCGDMDIVITHPDGKSH 382

Query: 386 --------------------------------------------------------VYPR 438
                                                                   VYPR
Sbjct: 383 RGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLCTYPGRELRHRIDLKVYPR 442

[Close]

BLAST of HG10015268 vs. ExPASy TrEMBL
Match: A0A1S3BFA5 (DNA polymerase OS=Cucumis melo OX=3656 GN=LOC103489040 PE=3 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 9.4e-192
Identity = 369/499 (73.95%), Postives = 387/499 (77.56%), Query Frame = 0


Query: 26  LVKLIDESSSHTWTRVLSKKLVQMGASIEERLSKMVSHIFAASSDALLQKVDGKRLARFK 85
           +V L+++       ++  +KLVQMGASIEERLSKMVSHIFA+SSDALL+KVD  RLARFK
Sbjct: 23  VVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSHIFASSSDALLEKVDSARLARFK 82

Query: 86  GKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKPQPFISKKLKLSPNNSEAVSSES 145
           G VLSYQWLEDSLSSGEKASEDLY+VKV LDE+GRD PQ    KKLKLSPNNSEAVS ES
Sbjct: 83  G-VLSYQWLEDSLSSGEKASEDLYTVKVGLDEDGRDNPQQSTPKKLKLSPNNSEAVSFES 142

Query: 146 GGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSIDSNTSLSYSPPDMNKNITEIFGK 205
           GG+SDASTLVT+TATG+EDSKLSIGQTVTSPRTS S+ +NTSLSYSPPDMNKNITEIFGK
Sbjct: 143 GGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSASVGNNTSLSYSPPDMNKNITEIFGK 202

Query: 206 LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL 265
           LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL
Sbjct: 203 LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL 262

Query: 266 SKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYF 325
           SKLEHFETDEKVRTISLFGEVWGIGPATA RLYEKGYRTLDDLQKEESLTHAQKLGLKYF
Sbjct: 263 SKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYRTLDDLQKEESLTHAQKLGLKYF 322

Query: 326 DDIKQRIPRNEVQDMESLLKKAGEDVLPG------------------------------- 385
           DDIKQRIPRNEVQDME+LLKKAGEDVLPG                               
Sbjct: 323 DDIKQRIPRNEVQDMENLLKKAGEDVLPGVDILCGGSFRRGKSSCGDMDIVITHPDGKSH 382

Query: 386 --------------------------------------------------------VYPR 438
                                                                   VYPR
Sbjct: 383 RGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLCTYPGRELRHRIDLKVYPR 442

[Close]

BLAST of HG10015268 vs. ExPASy TrEMBL
Match: A0A1S3BFG3 (DNA polymerase OS=Cucumis melo OX=3656 GN=LOC103489040 PE=3 SV=1)

HSP 1 Score: 677.2 bits (1746), Expect = 4.7e-191
Identity = 364/476 (76.47%), Postives = 375/476 (78.78%), Query Frame = 0


Query: 49  MGASIEERLSKMVSHIFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSLSSGEKASEDL 108
           MGASIEERLSKMVSHIFA+SSDALL+KVD  RLARFKGKVLSYQWLEDSLSSGEKASEDL
Sbjct: 1   MGASIEERLSKMVSHIFASSSDALLEKVDSARLARFKGKVLSYQWLEDSLSSGEKASEDL 60

Query: 109 YSVKVSLDEEGRDKPQPFISKKLKLSPNNSEAVSSESGGNSDASTLVTRTATGVEDSKLS 168
           Y+VKV LDE+GRD PQ    KKLKLSPNNSEAVS ESGG+SDASTLVT+TATG+EDSKLS
Sbjct: 61  YTVKVGLDEDGRDNPQQSTPKKLKLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLS 120

Query: 169 IGQTVTSPRTSDSIDSNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPV 228
           IGQTVTSPRTS S+ +NTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPV
Sbjct: 121 IGQTVTSPRTSASVGNNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPV 180

Query: 229 IEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWG 288
           IEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWG
Sbjct: 181 IEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWG 240

Query: 289 IGPATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAG 348
           IGPATA RLYEKGYRTLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDME+LLKKAG
Sbjct: 241 IGPATALRLYEKGYRTLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMENLLKKAG 300

Query: 349 EDVLPG------------------------------------------------------ 408
           EDVLPG                                                      
Sbjct: 301 EDVLPGVDILCGGSFRRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIF 360

Query: 409 ---------------------------------VYPRDIYAFGLIAWTGNDVLNRRLRLL 438
                                            VYPRDIYAFGLIAWTGNDVLNRRLRLL
Sbjct: 361 STHSEEGTDSGVDTYFGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLL 420

[Close]

BLAST of HG10015268 vs. ExPASy TrEMBL
Match: A0A5D3CUL1 (DNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00710 PE=3 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 1.6e-183
Identity = 354/458 (77.29%), Postives = 371/458 (81.00%), Query Frame = 0


Query: 26  LVKLIDESSSHTWTRVLSKKLVQMGASIEERLSKMVSHIFAASSDALLQKVDGKRLARFK 85
           +V L+++       ++  +KLVQMGASIEERLSKMVSHIFA+SSDALL+KVD  RLARFK
Sbjct: 23  VVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSHIFASSSDALLEKVDSARLARFK 82

Query: 86  GKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKPQPFISKKLKLSPNNSEAVSSES 145
           G VLSYQWLEDSLSSGEKASEDLY+VKV LDE+GRD PQ    KKLKLSPNNSEAVS ES
Sbjct: 83  G-VLSYQWLEDSLSSGEKASEDLYTVKVGLDEDGRDNPQQSTPKKLKLSPNNSEAVSFES 142

Query: 146 GGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSIDSNTSLSYSPPDMNKNITEIFGK 205
           GG+SDASTLVT+TATG+EDSKLSIGQTVTSPRTS S+ +NTSLSYSPPDMNKNITEIFGK
Sbjct: 143 GGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSASVGNNTSLSYSPPDMNKNITEIFGK 202

Query: 206 LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL 265
           LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL
Sbjct: 203 LINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKL 262

Query: 266 SKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYF 325
           SKLEHFETDEKVRTISLFGEVWGIGPATA RLYEKGYRTLDDLQKEESLTHAQKLGLKYF
Sbjct: 263 SKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYRTLDDLQKEESLTHAQKLGLKYF 322

Query: 326 DDIKQRIPRNEVQDMESLLKKAGEDVLPG------------------------------- 385
           DDIKQRIPRNEVQDME+LLKKAGEDVLPG                               
Sbjct: 323 DDIKQRIPRNEVQDMENLLKKAGEDVLPGVDILCGGSFRRGKSSCGDMDIVITHPDGKSH 382

Query: 386 -----------------------------VYPRDIYAFGLIAWTGNDVLNRRLRLLAESK 424
                                        VYPRDIYAFGLIAWTGNDVLNRRLRLLAESK
Sbjct: 383 RGFLPKYVKHLKDMKFLREDLIFSTHSEEVYPRDIYAFGLIAWTGNDVLNRRLRLLAESK 442

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BLAST of HG10015268 vs. TAIR 10
Match: AT1G10520.1 (DNA polymerase lambda (POLL) )

HSP 1 Score: 467.6 bits (1202), Expect = 1.1e-131
Identity = 263/498 (52.81%), Postives = 322/498 (64.66%), Query Frame = 0


Query: 40  RVLSKKLVQMGASIEE-RLSKMVSHIFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSL 99
           ++  +KLVQMGA IEE R++K V+H+ A + +ALL K   +RL+ F  +++ YQWLEDSL
Sbjct: 37  QIWKQKLVQMGAVIEEDRVTKKVTHVLAMNLEALLHKFGKERLSHFTARLMLYQWLEDSL 96

Query: 100 SSGEKASEDLYSVKVSLDEEGRDKPQ---PFIS---------KKLKLSPNNSEAVSSESG 159
           +SGEKA+EDLY +K+  D E  DKP+   P IS         K+ + SP+  +    ES 
Sbjct: 97  TSGEKANEDLYVLKI--DSEEVDKPKKSLPAISGSEDQSSPQKRTRYSPDAGDFKGVESH 156

Query: 160 GNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSIDSNTSLSYSPPDMNKNITEIFGKL 219
            N+  S   + T+  V  +  S G+ +    TS   +S +   Y PPD+N+NITEIFGKL
Sbjct: 157 SNTQGSP-DSPTSCSVPSTSASPGEGIAETPTSPQSESTS--VYKPPDLNRNITEIFGKL 216

Query: 220 INIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKLS 279
           INIYRALG++RRSFSYYKAIPVIEK P +IES+DQ+KHLP IGK+++DHIQEIVTTGKLS
Sbjct: 217 INIYRALGEDRRSFSYYKAIPVIEKFPTRIESVDQLKHLPGIGKAMRDHIQEIVTTGKLS 276

Query: 280 KLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYFD 339
           KLEHFETDEKVRTISLFGEVWG+GPATA +LYEKG+RTL+DL+ E+SLTHAQKLGLKYFD
Sbjct: 277 KLEHFETDEKVRTISLFGEVWGVGPATALKLYEKGHRTLEDLKNEDSLTHAQKLGLKYFD 336

Query: 340 DIKQRIPRNEVQDMESLLKKAGEDVLPG-------------------------------- 399
           DIK RIPR EVQ+ME LL++ GE+ LPG                                
Sbjct: 337 DIKTRIPRQEVQEMEQLLQRVGEETLPGVNIVCGGSYRRGKATCGDLDIVVTHPDGQSHK 396

Query: 400 -------------------------------------------------------VYPRD 438
                                                                  VYPRD
Sbjct: 397 GFLTKFVKRLKEMNFLREDLIFSTHSEEGTDSGVDTYFGLCTYPGQELRRRIDFKVYPRD 456

The following BLAST results are available for this feature:

BLAST of HG10015268 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446253.1	2.7e-193	74.15	PREDICTED: DNA polymerase beta isoform X1 [Cucumis melo] >XP_008446254.1 PREDICT...	[more]
XP_038892425.1	6.0e-193	74.15	DNA polymerase lambda isoform X1 [Benincasa hispida]	[more]
XP_004135473.1	3.9e-192	73.55	DNA polymerase lambda isoform X1 [Cucumis sativus] >KGN51838.1 hypothetical prot...	[more]
XP_008446256.1	1.9e-191	73.95	PREDICTED: DNA polymerase beta isoform X2 [Cucumis melo]	[more]
XP_038892426.1	4.3e-191	73.95	DNA polymerase lambda isoform X2 [Benincasa hispida]	[more]

BLAST of HG10015268 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNY4	1.5e-130	52.81	DNA polymerase lambda OS=Arabidopsis thaliana OX=3702 GN=POLL PE=1 SV=1	[more]
Q67VC8	9.6e-117	46.77	DNA polymerase lambda OS=Oryza sativa subsp. japonica OX=39947 GN=POLL PE=1 SV=1	[more]
Q6DRD3	2.2e-28	27.93	DNA polymerase beta OS=Danio rerio OX=7955 GN=polb PE=2 SV=2	[more]
Q27958	9.2e-27	26.59	DNA polymerase beta OS=Bos taurus OX=9913 GN=POLB PE=2 SV=3	[more]
O57383	9.2e-27	27.36	DNA polymerase beta OS=Xenopus laevis OX=8355 GN=polb PE=1 SV=3	[more]

BLAST of HG10015268 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BE44	1.3e-193	74.15	DNA polymerase OS=Cucumis melo OX=3656 GN=LOC103489040 PE=3 SV=1	[more]
A0A0A0KQD3	1.9e-192	73.55	DNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G603350 PE=3 SV=1	[more]
A0A1S3BFA5	9.4e-192	73.95	DNA polymerase OS=Cucumis melo OX=3656 GN=LOC103489040 PE=3 SV=1	[more]
A0A1S3BFG3	4.7e-191	76.47	DNA polymerase OS=Cucumis melo OX=3656 GN=LOC103489040 PE=3 SV=1	[more]
A0A5D3CUL1	1.6e-183	77.29	DNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00710 ...	[more]

BLAST of HG10015268 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10520.1	1.1e-131	52.81	DNA polymerase lambda (POLL)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002008	DNA polymerase family X, beta-like	PRINTS	PR00870	DNAPOLXBETA	coord: 319..333 score: 53.33 coord: 247..264 score: 36.67
IPR002054	DNA-directed DNA polymerase X	SMART	SM00483	polxneu3	coord: 194..436 e-value: 1.6E-67 score: 240.3
IPR002054	DNA-directed DNA polymerase X	CDD	cd00141	NT_POLXc	coord: 197..435 e-value: 2.64669E-75 score: 235.938
IPR036420	BRCT domain superfamily	GENE3D	3.40.50.10190	BRCT domain	coord: 25..113 e-value: 1.4E-9 score: 39.7
IPR036420	BRCT domain superfamily	SUPERFAMILY	52113	BRCT domain	coord: 32..111
IPR029398	DNA polymerase beta, thumb domain	PFAM	PF14791	DNA_pol_B_thumb	coord: 365..436 e-value: 4.3E-19 score: 68.4
IPR027421	DNA polymerase lambda lyase domain superfamily	GENE3D	1.10.150.110		coord: 183..270 e-value: 4.6E-25 score: 89.7
IPR027421	DNA polymerase lambda lyase domain superfamily	SUPERFAMILY	47802	DNA polymerase beta, N-terminal domain-like	coord: 191..271
IPR037160	DNA polymerase, thumb domain superfamily	GENE3D	3.30.210.10	DNA polymerase, thumb domain	coord: 360..436 e-value: 7.0E-19 score: 69.4
IPR010996	DNA polymerase beta-like, N-terminal domain	PFAM	PF14716	HHH_8	coord: 196..261 e-value: 1.8E-14 score: 53.8
IPR018944	DNA polymerase lambda, fingers domain	PFAM	PF10391	DNA_pol_lambd_f	coord: 282..328 e-value: 4.9E-19 score: 67.9
None	No IPR available	GENE3D	1.10.150.20		coord: 271..329 e-value: 1.5E-22 score: 81.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..153
None	No IPR available	PANTHER	PTHR11276:SF1	DNA POLYMERASE IV	coord: 40..354
None	No IPR available	PANTHER	PTHR11276:SF1	DNA POLYMERASE IV	coord: 355..436
None	No IPR available	SUPERFAMILY	81585	PsbU/PolX domain-like	coord: 274..329
IPR022312	DNA polymerase family X	PANTHER	PTHR11276	DNA POLYMERASE TYPE-X FAMILY MEMBER	coord: 355..436 coord: 40..354
IPR001357	BRCT domain	PROSITE	PS50172	BRCT	coord: 42..111 score: 11.614759
IPR043519	Nucleotidyltransferase superfamily	SUPERFAMILY	81301	Nucleotidyltransferase	coord: 355..436

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015268.1	HG10015268.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0006303	double-strand break repair via nonhomologous end joining
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0034061	DNA polymerase activity