HG10015180 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015180
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING-type domain-containing protein
Location	Chr02: 24580779 .. 24581195 (+)
RNA-Seq Expression	HG10015180
Synteny	HG10015180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTCTCAAATTTTCCCCCTTCAGCTGAAGGAGTGTTGCTGTTACCAGTTTTAGTGATGAACACTGTAATGTCAATGGCGTTCTTGAAGAATTTGGTGAGATCTGTGATACAAATGATGAGTGCGAGTGGGAATTCTTCGAGTTCTGAGGAAGAATACGATTGGGAAAATGGAAGAGAAAGAAGAATCTCAATTACTCAGTTCAAATCTTTGGGGCAAAGCTTTAATGGTGGAACAGAGAATGACTCTGCTTCGAGGTGTGTTATGGCAGAGTGTTGTGTTTGTCTGTGTAGGTTTGAAGCTGATGAAGAAGTTAGTGAGTTGTCTTGCAAGCACTTTTTTCATAAAGCTTGTCTTTCTAAGTGGTTTGATAATAAGCACTTTACTTGCCCTCTCTGTCGCTCCATTGAATAA

mRNA sequence

ATGGGTCTCTCAAATTTTCCCCCTTCAGCTGAAGGAGTGTTGCTGTTACCAGTTTTAGTGATGAACACTGTAATGTCAATGGCGTTCTTGAAGAATTTGGTGAGATCTGTGATACAAATGATGAGTGCGAGTGGGAATTCTTCGAGTTCTGAGGAAGAATACGATTGGGAAAATGGAAGAGAAAGAAGAATCTCAATTACTCAGTTCAAATCTTTGGGGCAAAGCTTTAATGGTGGAACAGAGAATGACTCTGCTTCGAGGTGTGTTATGGCAGAGTGTTGTGTTTGTCTGTGTAGGTTTGAAGCTGATGAAGAAGTTAGTGAGTTGTCTTGCAAGCACTTTTTTCATAAAGCTTGTCTTTCTAAGTGGTTTGATAATAAGCACTTTACTTGCCCTCTCTGTCGCTCCATTGAATAA

Coding sequence (CDS)

ATGGGTCTCTCAAATTTTCCCCCTTCAGCTGAAGGAGTGTTGCTGTTACCAGTTTTAGTGATGAACACTGTAATGTCAATGGCGTTCTTGAAGAATTTGGTGAGATCTGTGATACAAATGATGAGTGCGAGTGGGAATTCTTCGAGTTCTGAGGAAGAATACGATTGGGAAAATGGAAGAGAAAGAAGAATCTCAATTACTCAGTTCAAATCTTTGGGGCAAAGCTTTAATGGTGGAACAGAGAATGACTCTGCTTCGAGGTGTGTTATGGCAGAGTGTTGTGTTTGTCTGTGTAGGTTTGAAGCTGATGAAGAAGTTAGTGAGTTGTCTTGCAAGCACTTTTTTCATAAAGCTTGTCTTTCTAAGTGGTTTGATAATAAGCACTTTACTTGCCCTCTCTGTCGCTCCATTGAATAA

Protein sequence

MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNSSSSEEEYDWENGRERRISITQFKSLGQSFNGGTENDSASRCVMAECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCRSIE

Homology

[Close]

BLAST of HG10015180 vs. NCBI nr
Match: KAA0034267.1 (putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa] >TYK15653.1 putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa])

HSP 1 Score: 266.2 bits (679), Expect = 1.6e-67
Identity = 130/138 (94.20%), Postives = 133/138 (96.38%), Query Frame = 0


Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVM+TVMSMAFLKN VRSVIQMMSASGNSSSSEEEYDWENGR
Sbjct: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGR 60

Query: 61  ERRISITQFKSLGQSFNGGTENDSASRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120
           ERRISITQFK+LGQSFNG TE +  SRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL
Sbjct: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120

Query: 121 SKWFDNKHFTCPLCRSIE 139
           SKWFDNKHFTCPLCRSIE
Sbjct: 121 SKWFDNKHFTCPLCRSIE 138

[Close]

BLAST of HG10015180 vs. NCBI nr
Match: XP_011655602.1 (probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus])

HSP 1 Score: 265.0 bits (676), Expect = 3.6e-67
Identity = 130/138 (94.20%), Postives = 132/138 (95.65%), Query Frame = 0


Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKN VRSVIQMMSASGNSSSSEEEYDWEN R
Sbjct: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRR 60

Query: 61  ERRISITQFKSLGQSFNGGTENDSASRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120
           ERRISITQFK+LGQSFNG TE +  SRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL
Sbjct: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120

Query: 121 SKWFDNKHFTCPLCRSIE 139
           SKWFDNKHFTCPLCRSIE
Sbjct: 121 SKWFDNKHFTCPLCRSIE 138

[Close]

BLAST of HG10015180 vs. NCBI nr
Match: XP_022984317.1 (probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima])

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 131/139 (94.24%), Postives = 133/139 (95.68%), Query Frame = 0


Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGN SSSEEE+DWENGR
Sbjct: 43  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGR 102

Query: 61  ERRISITQFKSLGQSF-NGGTENDSASRCVMAECCVCLCRFEADEEVSELSCKHFFHKAC 120
           ERRISITQFKSLGQSF NGGTE  SASRC+MAECCVCLC FEADEEVSELSCKHFFHKAC
Sbjct: 103 ERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEEVSELSCKHFFHKAC 162

Query: 121 LSKWFDNKHFTCPLCRSIE 139
           LSKWFDNKH TCPLCRSIE
Sbjct: 163 LSKWFDNKHITCPLCRSIE 181

[Close]

BLAST of HG10015180 vs. NCBI nr
Match: KAG6601543.1 (putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032315.1 putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.9 bits (668), Expect = 3.1e-66
Identity = 132/139 (94.96%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGN SSSEEE DWENGR
Sbjct: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGR 60

Query: 61  ERRISITQFKSLGQSF-NGGTENDSASRCVMAECCVCLCRFEADEEVSELSCKHFFHKAC 120
           ERRISITQFKSLGQSF NGGTE  SASRCVMAECCVCLC FEADEEVSELSCKHFFHKAC
Sbjct: 61  ERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCGFEADEEVSELSCKHFFHKAC 120

Query: 121 LSKWFDNKHFTCPLCRSIE 139
           LSKWFDNKH TCPLCRSIE
Sbjct: 121 LSKWFDNKHITCPLCRSIE 139

[Close]

BLAST of HG10015180 vs. NCBI nr
Match: XP_022957080.1 (probable E3 ubiquitin-protein ligase XERICO [Cucurbita moschata])

HSP 1 Score: 261.9 bits (668), Expect = 3.1e-66
Identity = 132/139 (94.96%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGN SSSEEE DWENGR
Sbjct: 75  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGR 134

Query: 61  ERRISITQFKSLGQSF-NGGTENDSASRCVMAECCVCLCRFEADEEVSELSCKHFFHKAC 120
           ERRISITQFKSLGQSF NGGTE  SASRCVMAECCVCLC FEADEEVSELSCKHFFHKAC
Sbjct: 135 ERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCGFEADEEVSELSCKHFFHKAC 194

Query: 121 LSKWFDNKHFTCPLCRSIE 139
           LSKWFDNKH TCPLCRSIE
Sbjct: 195 LSKWFDNKHITCPLCRSIE 213

[Close]

BLAST of HG10015180 vs. ExPASy Swiss-Prot
Match: Q9SI09 (Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=XERICO PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 5.1e-16
Identity = 54/148 (36.49%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSAS---GNSSSSEEEYDWE 60
           MGLS+ P  +EG+L   V+++NT +S++ +K +VRS + ++  S    +SS S      E
Sbjct: 1   MGLSSLPGPSEGMLC--VILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSE 60

Query: 61  NGRERR---ISITQFKSLGQSFNGGTEN---DSASRCVMA---ECCVCLCRFEADEEVSE 120
           N          + Q +S  + F   T     +S  RC      EC VCL +F+ D E+++
Sbjct: 61  NSSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINK 120

Query: 121 LSCKHFFHKACLSKWFDNKHFTCPLCRS 137
           L C H FHK CL KW D  + TCPLCR+
Sbjct: 121 LKCGHLFHKTCLEKWIDYWNITCPLCRT 146

[Close]

BLAST of HG10015180 vs. ExPASy Swiss-Prot
Match: Q9ZU51 (E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-08
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 91  AECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCRS 137
           ++C VCL + +  EEV +L C+H FHK CL  W  + +F CPLCRS
Sbjct: 72  SDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRS 117

[Close]

BLAST of HG10015180 vs. ExPASy Swiss-Prot
Match: Q93Z92 (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-07
Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 0


Query: 91  AECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCR 136
           AECC+CLC +E   E+ EL C H FH  C+ KW  + +  CPLC+
Sbjct: 336 AECCICLCEYEDGVELRELPCNHHFHCTCIDKWL-HINSRCPLCK 379

[Close]

BLAST of HG10015180 vs. ExPASy Swiss-Prot
Match: Q9XF92 (Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.4e-07
Identity = 36/132 (27.27%), Postives = 64/132 (48.48%), Query Frame = 0


Query: 14  LLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNSSSSEEEYDWENGRERRISITQFKSLG 73
           + LP L + T+  + F++ +V S+ + +   G S   E +  W +       I + +S  
Sbjct: 10  VFLPKLFVQTLSILGFIRTIVFSIFRFL---GLSDFLEMDQTWPDYTSYPTRIPETRSPF 69

Query: 74  QSF--------NGGTENDSASRCVMAECCVCLCRFEADEEVSEL-SCKHFFHKACLSKWF 133
            +             E  ++   +   C VCL  FE ++E+  L +C+H FH++CL +W 
Sbjct: 70  SALLIREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWM 129

Query: 134 DNKHFTCPLCRS 137
           D+   TCPLCR+
Sbjct: 130 DHDQKTCPLCRT 138

[Close]

BLAST of HG10015180 vs. ExPASy Swiss-Prot
Match: Q8LDB8 (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06
Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 0


Query: 91  AECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCR 136
           AECC+CL  +E + E+ EL C H FH  C+ KW    + TCPLC+
Sbjct: 323 AECCICLSAYEDETELRELPCGHHFHCGCVDKWL-YINATCPLCK 366

[Close]

BLAST of HG10015180 vs. ExPASy TrEMBL
Match: A0A5A7SYA9 (Putative E3 ubiquitin-protein ligase XERICO OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001500 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 7.8e-68
Identity = 130/138 (94.20%), Postives = 133/138 (96.38%), Query Frame = 0


Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVM+TVMSMAFLKN VRSVIQMMSASGNSSSSEEEYDWENGR
Sbjct: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGR 60

Query: 61  ERRISITQFKSLGQSFNGGTENDSASRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120
           ERRISITQFK+LGQSFNG TE +  SRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL
Sbjct: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120

Query: 121 SKWFDNKHFTCPLCRSIE 139
           SKWFDNKHFTCPLCRSIE
Sbjct: 121 SKWFDNKHFTCPLCRSIE 138

[Close]

BLAST of HG10015180 vs. ExPASy TrEMBL
Match: A0A0A0KTI8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G598060 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.7e-67
Identity = 130/138 (94.20%), Postives = 132/138 (95.65%), Query Frame = 0


Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKN VRSVIQMMSASGNSSSSEEEYDWEN R
Sbjct: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRR 60

Query: 61  ERRISITQFKSLGQSFNGGTENDSASRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120
           ERRISITQFK+LGQSFNG TE +  SRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL
Sbjct: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120

Query: 121 SKWFDNKHFTCPLCRSIE 139
           SKWFDNKHFTCPLCRSIE
Sbjct: 121 SKWFDNKHFTCPLCRSIE 138

[Close]

BLAST of HG10015180 vs. ExPASy TrEMBL
Match: A0A6J1J1V9 (probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita maxima OX=3661 GN=LOC111482652 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 6.6e-67
Identity = 131/139 (94.24%), Postives = 133/139 (95.68%), Query Frame = 0


Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGN SSSEEE+DWENGR
Sbjct: 43  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGR 102

Query: 61  ERRISITQFKSLGQSF-NGGTENDSASRCVMAECCVCLCRFEADEEVSELSCKHFFHKAC 120
           ERRISITQFKSLGQSF NGGTE  SASRC+MAECCVCLC FEADEEVSELSCKHFFHKAC
Sbjct: 103 ERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEEVSELSCKHFFHKAC 162

Query: 121 LSKWFDNKHFTCPLCRSIE 139
           LSKWFDNKH TCPLCRSIE
Sbjct: 163 LSKWFDNKHITCPLCRSIE 181

[Close]

BLAST of HG10015180 vs. ExPASy TrEMBL
Match: A0A6J1GZI7 (probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita moschata OX=3662 GN=LOC111458569 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.5e-66
Identity = 132/139 (94.96%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGN SSSEEE DWENGR
Sbjct: 75  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGR 134

Query: 61  ERRISITQFKSLGQSF-NGGTENDSASRCVMAECCVCLCRFEADEEVSELSCKHFFHKAC 120
           ERRISITQFKSLGQSF NGGTE  SASRCVMAECCVCLC FEADEEVSELSCKHFFHKAC
Sbjct: 135 ERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCGFEADEEVSELSCKHFFHKAC 194

Query: 121 LSKWFDNKHFTCPLCRSIE 139
           LSKWFDNKH TCPLCRSIE
Sbjct: 195 LSKWFDNKHITCPLCRSIE 213

[Close]

BLAST of HG10015180 vs. ExPASy TrEMBL
Match: A0A6J1DFU2 (probable E3 ubiquitin-protein ligase XERICO OS=Momordica charantia OX=3673 GN=LOC111019714 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.2e-61
Identity = 123/140 (87.86%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNS--SSSEEEYDWEN 60
           MGLSNFPP AEGVLLLPVL+MNTVMSMAFLK+LVRSVIQMMSASG++  SSSEEEYD EN
Sbjct: 1   MGLSNFPPPAEGVLLLPVLLMNTVMSMAFLKSLVRSVIQMMSASGSASPSSSEEEYDSEN 60

Query: 61  GRERRISITQFKSLGQSFNGGTENDSASRCVMAECCVCLCRFEADEEVSELSCKHFFHKA 120
            RERRISITQFKSL QSFNGGTE+ SASRC+ AECCVCLC FEADEEVSELSCKHFFHKA
Sbjct: 61  ARERRISITQFKSLRQSFNGGTEDGSASRCIAAECCVCLCGFEADEEVSELSCKHFFHKA 120

Query: 121 CLSKWFDNKHFTCPLCRSIE 139
           CLSKWFDNKH TCPLCRSI+
Sbjct: 121 CLSKWFDNKHITCPLCRSIQ 140

[Close]

BLAST of HG10015180 vs. TAIR 10
Match: AT1G67856.1 (RING/U-box superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 3.6e-33
Identity = 75/140 (53.57%), Postives = 104/140 (74.29%), Query Frame = 0


Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNSS-SSEEEYDWENG 60
           MG+S++P ++EGV  +P+LVMNTV+S++ +KN+VRSV+ M+S+  N + + E++ D E+ 
Sbjct: 1   MGISHYPTASEGV--MPMLVMNTVVSVSLVKNMVRSVVNMVSSETNEARNKEDDQDHEDS 60

Query: 61  -RERRISITQFKSLGQSFNGGTENDSASRCVMAECCVCLCRFEADEEVSEL-SCKHFFHK 120
            R RRISIT F+SL +  N G+ N+  +     +CCVCLC F+ +EEVSEL SCKH+FH 
Sbjct: 61  KRRRRISITHFESLCE--NRGSRNEREA----MDCCVCLCGFKEEEEVSELVSCKHYFHS 120

Query: 121 ACLSKWFDNKHFTCPLCRSI 138
           ACL KWF N H TCPLCRSI
Sbjct: 121 ACLDKWFGNNHTTCPLCRSI 132

[Close]

BLAST of HG10015180 vs. TAIR 10
Match: AT1G24580.1 (RING/U-box superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 5.1e-27
Identity = 63/118 (53.39%), Postives = 79/118 (66.95%), Query Frame = 0


Query: 21  MNTVMSMAFLKNLVRSVIQMMSASGNSSSSEEEYDWENGRERRISITQFKSLGQSFNGGT 80
           MNTV+S+  LKN+VRSV Q++++   SS   ++   ++   RRISITQFKSL ++     
Sbjct: 1   MNTVVSITLLKNMVRSVFQIVASETESSMEIDDEPEDDFVTRRISITQFKSLCENIEEEE 60

Query: 81  ENDSASRCVMAECCVCLCRFEADEEVSEL-SCKHFFHKACLSKWFDNKHFTCPLCRSI 138
           E          ECCVCLC F+ +EEVSEL SCKHFFH+ACL  WF N H TCPLCRSI
Sbjct: 61  EEKG------VECCVCLCGFKEEEEVSELVSCKHFFHRACLDNWFGNNHTTCPLCRSI 112

[Close]

BLAST of HG10015180 vs. TAIR 10
Match: AT2G04240.1 (RING/U-box superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 3.7e-17
Identity = 54/148 (36.49%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSAS---GNSSSSEEEYDWE 60
           MGLS+ P  +EG+L   V+++NT +S++ +K +VRS + ++  S    +SS S      E
Sbjct: 1   MGLSSLPGPSEGMLC--VILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSE 60

Query: 61  NGRERR---ISITQFKSLGQSFNGGTEN---DSASRCVMA---ECCVCLCRFEADEEVSE 120
           N          + Q +S  + F   T     +S  RC      EC VCL +F+ D E+++
Sbjct: 61  NSSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINK 120

Query: 121 LSCKHFFHKACLSKWFDNKHFTCPLCRS 137
           L C H FHK CL KW D  + TCPLCR+
Sbjct: 121 LKCGHLFHKTCLEKWIDYWNITCPLCRT 146

[Close]

BLAST of HG10015180 vs. TAIR 10
Match: AT2G04240.2 (RING/U-box superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 3.7e-17
Identity = 54/148 (36.49%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSAS---GNSSSSEEEYDWE 60
           MGLS+ P  +EG+L   V+++NT +S++ +K +VRS + ++  S    +SS S      E
Sbjct: 1   MGLSSLPGPSEGMLC--VILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSE 60

Query: 61  NGRERR---ISITQFKSLGQSFNGGTEN---DSASRCVMA---ECCVCLCRFEADEEVSE 120
           N          + Q +S  + F   T     +S  RC      EC VCL +F+ D E+++
Sbjct: 61  NSSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINK 120

Query: 121 LSCKHFFHKACLSKWFDNKHFTCPLCRS 137
           L C H FHK CL KW D  + TCPLCR+
Sbjct: 121 LKCGHLFHKTCLEKWIDYWNITCPLCRT 146

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BLAST of HG10015180 vs. TAIR 10
Match: AT4G32600.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 8.7e-11
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 79  GTENDSASRCVMAECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCRS 137
           GT+N+ A     A CC+CL ++  +EE+ EL C HFFHK C+ KW    + +CPLC+S
Sbjct: 349 GTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWL-KINASCPLCKS 405

The following BLAST results are available for this feature:

BLAST of HG10015180 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034267.1	1.6e-67	94.20	putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa] >TYK15653...	[more]
XP_011655602.1	3.6e-67	94.20	probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus]	[more]
XP_022984317.1	1.4e-66	94.24	probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima]	[more]
KAG6601543.1	3.1e-66	94.96	putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma sub...	[more]
XP_022957080.1	3.1e-66	94.96	probable E3 ubiquitin-protein ligase XERICO [Cucurbita moschata]	[more]

BLAST of HG10015180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SI09	5.1e-16	36.49	Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=X...	[more]
Q9ZU51	1.0e-08	50.00	E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 ...	[more]
Q93Z92	2.6e-07	48.89	E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g116...	[more]
Q9XF92	4.4e-07	27.27	Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH...	[more]
Q8LDB8	1.7e-06	48.89	E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g631...	[more]

BLAST of HG10015180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYA9	7.8e-68	94.20	Putative E3 ubiquitin-protein ligase XERICO OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0KTI8	1.7e-67	94.20	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G598060 P...	[more]
A0A6J1J1V9	6.6e-67	94.24	probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1GZI7	1.5e-66	94.96	probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1DFU2	3.2e-61	87.86	probable E3 ubiquitin-protein ligase XERICO OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of HG10015180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67856.1	3.6e-33	53.57	RING/U-box superfamily protein	[more]
AT1G24580.1	5.1e-27	53.39	RING/U-box superfamily protein	[more]
AT2G04240.1	3.7e-17	36.49	RING/U-box superfamily protein	[more]
AT2G04240.2	3.7e-17	36.49	RING/U-box superfamily protein	[more]
AT4G32600.1	8.7e-11	46.55	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 93..134 e-value: 2.9E-4 score: 30.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 92..135 e-value: 5.1E-11 score: 42.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 93..135 score: 12.149959
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 39..138 e-value: 5.1E-16 score: 60.1
IPR044249	Probable E3 ubiquitin-protein ligase XERICO-like	PANTHER	PTHR47258	FAMILY NOT NAMED	coord: 1..137
None	No IPR available	PANTHER	PTHR47258:SF3	F21J9.24-RELATED	coord: 1..137
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 92..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015180.1	HG10015180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding