HG10015178 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015178
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein of unknown function (DUF707)
Location	Chr02: 24575573 .. 24576657 (+)
RNA-Seq Expression	HG10015178
Synteny	HG10015178

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGGATTTAACAGGCTGGCTGCAATCCTACAACATGAACATGGTAATGCTTTAGAGGGTGAATTAGCTAGAAGTTAGGATAAAGGCTGACCATTTCCTTTAAAGAAGCTAGGCCATAGAAACACTCCCTTGCCCTTGGGGCCTACTAACATCACAGTAGCAAAACCCTTTTCTCATTGTCTGCCTTTGGCTATCTCATCATGTTCGAAATTGTACTTCTACACGTCTTTTTCCTTCATCTGGTTACTAGTTTATTGGCTTAAGGTTTTCAAGGTTCTAGTGAAACATTGAAGGGAGTGATGACTAAAGTTATGCAGGGATACTTACTGAACTAAATAGCTATGGCTAGACTTACCTTTTGAAATCTTTCCCTTCCATATAAAGAGACATTTCATTCGTAAACTATATGATAATATCACAACTTTGGAGTTTGGGCTCCTTTATTTAAAATTCTTTTGCATAGTGGGAGCATGAGAATATTGACATTCTATGAATATGTTACTTCAAGTTCTTGATCTAGACAAGCTTCTTTAAAGAAAAAAGAAAAAAGAAAATTGCATAGCTATATGGCTATTGCTTGTATTTGTCTTCGGTAACTAGAAAAACTGTTATGATCAAGGCAGGTGCTTGATTGTTTTGCTTAGTTTATTTGCCTCAGACTCGTGCATCCTACTTTCCTCTAAATATGATGTGATGCAGATTTGGGTTCCATCAAATCCTAGGGGAGCAGAAAGACTAGCCCCAGGAATTGTTGCAGCTGAGTCAGACTTATATCTGCACAGATTGTGGGGTAATCCCAATGAGGTGTGTTTTGATTTTGCACAACATAATTTTGAGAATGTCTTCTGTTAAATACATGACTTTACAAGCAGTAGTATGTTTTAGACACACTTCCGTTATAAGACATCCTGAAATACCATACTTGACATGCATCAGGTTTGTTATAGTTGCCTTGTACTTAATCAGATAAATGTTTGCAGGACTTAACTACGAAACCAAATTACCTTGTAACCTTTACTGTCGGTTATAATCAGAGAGAGAACATTGATAAAGCAGTAAAAAAGGTCCCTTTCATCCTCTAA

mRNA sequence

ATGTTTGGATTTAACAGGCTGGCTGCAATCCTACAACATGAACATGGTAATGCTTTAGAGGACTCGTGCATCCTACTTTCCTCTAAATATGATGTGATGCAGATTTGGGTTCCATCAAATCCTAGGGGAGCAGAAAGACTAGCCCCAGGAATTGTTGCAGCTGAGTCAGACTTATATCTGCACAGATTGTGGGGTAATCCCAATGAGGACTTAACTACGAAACCAAATTACCTTGTAACCTTTACTGTCGGTTATAATCAGAGAGAGAACATTGATAAAGCAGTAAAAAAGGTCCCTTTCATCCTCTAA

Coding sequence (CDS)

ATGTTTGGATTTAACAGGCTGGCTGCAATCCTACAACATGAACATGGTAATGCTTTAGAGGACTCGTGCATCCTACTTTCCTCTAAATATGATGTGATGCAGATTTGGGTTCCATCAAATCCTAGGGGAGCAGAAAGACTAGCCCCAGGAATTGTTGCAGCTGAGTCAGACTTATATCTGCACAGATTGTGGGGTAATCCCAATGAGGACTTAACTACGAAACCAAATTACCTTGTAACCTTTACTGTCGGTTATAATCAGAGAGAGAACATTGATAAAGCAGTAAAAAAGGTCCCTTTCATCCTCTAA

Protein sequence

MFGFNRLAAILQHEHGNALEDSCILLSSKYDVMQIWVPSNPRGAERLAPGIVAAESDLYLHRLWGNPNEDLTTKPNYLVTFTVGYNQRENIDKAVKKVPFIL

Homology

[Close]

BLAST of HG10015178 vs. NCBI nr
Match: XP_038891433.1 (uncharacterized protein LOC120080853 [Benincasa hispida])

HSP 1 Score: 135.2 bits (339), Expect = 3.2e-28
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 34  QIWVPSNPRGAERLAPGIVAAESDLYLHRLWGNPNEDLTTKPNYLVTFTVGYNQRENIDK 93
           +IWVPSNPRGAERLAPGIVAAESD YLHRLWGNPNEDLTTKPNYLVTFTVGY QRENIDK
Sbjct: 97  EIWVPSNPRGAERLAPGIVAAESDFYLHRLWGNPNEDLTTKPNYLVTFTVGYKQRENIDK 156

Query: 94  AVKK 98
           AVKK
Sbjct: 157 AVKK 160

[Close]

BLAST of HG10015178 vs. NCBI nr
Match: XP_008446151.1 (PREDICTED: uncharacterized protein LOC103488962 [Cucumis melo] >XP_008446153.1 PREDICTED: uncharacterized protein LOC103488962 [Cucumis melo] >XP_008446154.1 PREDICTED: uncharacterized protein LOC103488962 [Cucumis melo] >XP_008446155.1 PREDICTED: uncharacterized protein LOC103488962 [Cucumis melo] >XP_016900165.1 PREDICTED: uncharacterized protein LOC103488962 [Cucumis melo] >KAA0034266.1 uncharacterized protein E6C27_scaffold65G002650 [Cucumis melo var. makuwa] >TYK15654.1 uncharacterized protein E5676_scaffold35G001510 [Cucumis melo var. makuwa])

HSP 1 Score: 132.1 bits (331), Expect = 2.7e-27
Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 34  QIWVPSNPRGAERLAPGIVAAESDLYLHRLWGNPNEDLTTKPNYLVTFTVGYNQRENIDK 93
           +IWVPSNPRGAERLAPGIVAAESD YLHRLWGNPNEDL TKPNYLVTFTVGY QRENID+
Sbjct: 96  EIWVPSNPRGAERLAPGIVAAESDFYLHRLWGNPNEDLNTKPNYLVTFTVGYKQRENIDR 155

Query: 94  AVKK 98
           AVKK
Sbjct: 156 AVKK 159

[Close]

BLAST of HG10015178 vs. NCBI nr
Match: KAG6573702.1 (Alpha-L-fucosidase 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 131.7 bits (330), Expect = 3.5e-27
Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 34  QIWVPSNPRGAERLAPGIVAAESDLYLHRLWGNPNEDLTTKPNYLVTFTVGYNQRENIDK 93
           +IWVPSNPRGAERLAPGIVAAESD YLHRLWGNPNEDL  KPNYLVTFTVGYNQR+NIDK
Sbjct: 450 EIWVPSNPRGAERLAPGIVAAESDFYLHRLWGNPNEDLPRKPNYLVTFTVGYNQRDNIDK 509

Query: 94  AVKK 98
           AVKK
Sbjct: 510 AVKK 513

[Close]

BLAST of HG10015178 vs. NCBI nr
Match: XP_022945497.1 (uncharacterized protein LOC111449713 isoform X2 [Cucurbita moschata])

HSP 1 Score: 131.7 bits (330), Expect = 3.5e-27
Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 34  QIWVPSNPRGAERLAPGIVAAESDLYLHRLWGNPNEDLTTKPNYLVTFTVGYNQRENIDK 93
           +IWVPSNPRGAERLAPGIVAAESD YLHRLWGNPNEDL  KPNYLVTFTVGYNQR+NIDK
Sbjct: 74  EIWVPSNPRGAERLAPGIVAAESDFYLHRLWGNPNEDLPRKPNYLVTFTVGYNQRDNIDK 133

Query: 94  AVKK 98
           AVKK
Sbjct: 134 AVKK 137

[Close]

BLAST of HG10015178 vs. NCBI nr
Match: KAG7012780.1 (hypothetical protein SDJN02_25533, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 131.7 bits (330), Expect = 3.5e-27
Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 34  QIWVPSNPRGAERLAPGIVAAESDLYLHRLWGNPNEDLTTKPNYLVTFTVGYNQRENIDK 93
           +IWVPSNPRGAERLAPGIVAAESD YLHRLWGNPNEDL  KPNYLVTFTVGYNQR+NIDK
Sbjct: 147 EIWVPSNPRGAERLAPGIVAAESDFYLHRLWGNPNEDLPRKPNYLVTFTVGYNQRDNIDK 206

Query: 94  AVKK 98
           AVKK
Sbjct: 207 AVKK 210

[Close]

BLAST of HG10015178 vs. ExPASy TrEMBL
Match: A0A1S4DWR8 (uncharacterized protein LOC103488962 OS=Cucumis melo OX=3656 GN=LOC103488962 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.3e-27
Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 34  QIWVPSNPRGAERLAPGIVAAESDLYLHRLWGNPNEDLTTKPNYLVTFTVGYNQRENIDK 93
           +IWVPSNPRGAERLAPGIVAAESD YLHRLWGNPNEDL TKPNYLVTFTVGY QRENID+
Sbjct: 96  EIWVPSNPRGAERLAPGIVAAESDFYLHRLWGNPNEDLNTKPNYLVTFTVGYKQRENIDR 155

Query: 94  AVKK 98
           AVKK
Sbjct: 156 AVKK 159

[Close]

BLAST of HG10015178 vs. ExPASy TrEMBL
Match: A0A5D3CXI6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001510 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.3e-27
Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 34  QIWVPSNPRGAERLAPGIVAAESDLYLHRLWGNPNEDLTTKPNYLVTFTVGYNQRENIDK 93
           +IWVPSNPRGAERLAPGIVAAESD YLHRLWGNPNEDL TKPNYLVTFTVGY QRENID+
Sbjct: 96  EIWVPSNPRGAERLAPGIVAAESDFYLHRLWGNPNEDLNTKPNYLVTFTVGYKQRENIDR 155

Query: 94  AVKK 98
           AVKK
Sbjct: 156 AVKK 159

[Close]

BLAST of HG10015178 vs. ExPASy TrEMBL
Match: A0A6J1G138 (uncharacterized protein LOC111449713 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449713 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.7e-27
Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 34  QIWVPSNPRGAERLAPGIVAAESDLYLHRLWGNPNEDLTTKPNYLVTFTVGYNQRENIDK 93
           +IWVPSNPRGAERLAPGIVAAESD YLHRLWGNPNEDL  KPNYLVTFTVGYNQR+NIDK
Sbjct: 74  EIWVPSNPRGAERLAPGIVAAESDFYLHRLWGNPNEDLPRKPNYLVTFTVGYNQRDNIDK 133

Query: 94  AVKK 98
           AVKK
Sbjct: 134 AVKK 137

[Close]

BLAST of HG10015178 vs. ExPASy TrEMBL
Match: A0A6J1G113 (uncharacterized protein LOC111449713 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449713 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.7e-27
Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 34  QIWVPSNPRGAERLAPGIVAAESDLYLHRLWGNPNEDLTTKPNYLVTFTVGYNQRENIDK 93
           +IWVPSNPRGAERLAPGIVAAESD YLHRLWGNPNEDL  KPNYLVTFTVGYNQR+NIDK
Sbjct: 90  EIWVPSNPRGAERLAPGIVAAESDFYLHRLWGNPNEDLPRKPNYLVTFTVGYNQRDNIDK 149

Query: 94  AVKK 98
           AVKK
Sbjct: 150 AVKK 153

[Close]

BLAST of HG10015178 vs. ExPASy TrEMBL
Match: A0A6J1DFZ5 (uncharacterized protein LOC111019745 OS=Momordica charantia OX=3673 GN=LOC111019745 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.2e-27
Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 34  QIWVPSNPRGAERLAPGIVAAESDLYLHRLWGNPNEDLTTKPNYLVTFTVGYNQRENIDK 93
           +IWVPSNPRGAE LAPGIVAAESD YLHRLWGNPNEDLT KPNYLVTFTVGYNQR+NIDK
Sbjct: 98  KIWVPSNPRGAEMLAPGIVAAESDFYLHRLWGNPNEDLTRKPNYLVTFTVGYNQRDNIDK 157

Query: 94  AVKK 98
           AVKK
Sbjct: 158 AVKK 161

[Close]

BLAST of HG10015178 vs. TAIR 10
Match: AT1G67850.1 (Protein of unknown function (DUF707) )

HSP 1 Score: 106.3 bits (264), Expect = 1.5e-23
Identity = 48/71 (67.61%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 27  SSKYDVMQIWVPSNPRGAERLAPGIVAAESDLYLHRLWGNPNEDLTTKPNYLVTFTVGYN 86
           S+  D  +IWVPSNPRGAE L PG+VAAESD YL RLWG P+EDL ++P YL TFTVG N
Sbjct: 87  STPIDKSKIWVPSNPRGAEMLPPGMVAAESDFYLRRLWGLPHEDLKSEPRYLATFTVGIN 146

Query: 87  QRENIDKAVKK 98
           Q+ NID  VKK
Sbjct: 147 QKANIDACVKK 157

[Close]

BLAST of HG10015178 vs. TAIR 10
Match: AT1G67850.2 (Protein of unknown function (DUF707) )

HSP 1 Score: 106.3 bits (264), Expect = 1.5e-23
Identity = 48/71 (67.61%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 27  SSKYDVMQIWVPSNPRGAERLAPGIVAAESDLYLHRLWGNPNEDLTTKPNYLVTFTVGYN 86
           S+  D  +IWVPSNPRGAE L PG+VAAESD YL RLWG P+EDL ++P YL TFTVG N
Sbjct: 87  STPIDKSKIWVPSNPRGAEMLPPGMVAAESDFYLRRLWGLPHEDLKSEPRYLATFTVGIN 146

Query: 87  QRENIDKAVKK 98
           Q+ NID  VKK
Sbjct: 147 QKANIDACVKK 157

[Close]

BLAST of HG10015178 vs. TAIR 10
Match: AT3G27470.1 (Protein of unknown function (DUF707) )

HSP 1 Score: 105.9 bits (263), Expect = 1.9e-23
Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 0


Query: 30  YDVMQIWVPSNPRGAERLAPGIVAAESDLYLHRLWGNPNEDLTTKPNYLVTFTVGYNQRE 89
           Y+  +IWV +NPRGAERL P IV  ESD YL RLWG+PNEDLT K  YLVTFTVGY+QR+
Sbjct: 86  YNDTKIWVSTNPRGAERLPPDIVTPESDFYLRRLWGDPNEDLTVKQRYLVTFTVGYDQRK 145

Query: 90  NIDKAVKK 98
           NID  +KK
Sbjct: 146 NIDTVLKK 153

[Close]

BLAST of HG10015178 vs. TAIR 10
Match: AT3G27470.2 (Protein of unknown function (DUF707) )

HSP 1 Score: 105.9 bits (263), Expect = 1.9e-23
Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 0


Query: 30  YDVMQIWVPSNPRGAERLAPGIVAAESDLYLHRLWGNPNEDLTTKPNYLVTFTVGYNQRE 89
           Y+  +IWV +NPRGAERL P IV  ESD YL RLWG+PNEDLT K  YLVTFTVGY+QR+
Sbjct: 86  YNDTKIWVSTNPRGAERLPPDIVTPESDFYLRRLWGDPNEDLTVKQRYLVTFTVGYDQRK 145

Query: 90  NIDKAVKK 98
           NID  +KK
Sbjct: 146 NIDTVLKK 153

[Close]

BLAST of HG10015178 vs. TAIR 10
Match: AT1G13000.1 (Protein of unknown function (DUF707) )

HSP 1 Score: 99.8 bits (247), Expect = 1.4e-21
Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 34  QIWVPSNPRGAERLAPGIVAAESDLYLHRLWGNPNEDLTTKPNYLVTFTVGYNQRENIDK 93
           +IWVPSNPRGAE L PGI+A ESD YL RLWG P ED+  KP YL+ FTVG+ Q+ N+D 
Sbjct: 98  KIWVPSNPRGAEMLTPGIIAPESDYYLRRLWGLPEEDVPVKPKYLIAFTVGFGQKVNVDA 157

Query: 94  AVKK 98
            VKK
Sbjct: 158 CVKK 161

The following BLAST results are available for this feature:

BLAST of HG10015178 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891433.1	3.2e-28	95.31	uncharacterized protein LOC120080853 [Benincasa hispida]	[more]
XP_008446151.1	2.7e-27	92.19	PREDICTED: uncharacterized protein LOC103488962 [Cucumis melo] >XP_008446153.1 P...	[more]
KAG6573702.1	3.5e-27	92.19	Alpha-L-fucosidase 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022945497.1	3.5e-27	92.19	uncharacterized protein LOC111449713 isoform X2 [Cucurbita moschata]	[more]
KAG7012780.1	3.5e-27	92.19	hypothetical protein SDJN02_25533, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of HG10015178 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10015178 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DWR8	1.3e-27	92.19	uncharacterized protein LOC103488962 OS=Cucumis melo OX=3656 GN=LOC103488962 PE=...	[more]
A0A5D3CXI6	1.3e-27	92.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1G138	1.7e-27	92.19	uncharacterized protein LOC111449713 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1G113	1.7e-27	92.19	uncharacterized protein LOC111449713 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1DFZ5	2.2e-27	92.19	uncharacterized protein LOC111019745 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]

BLAST of HG10015178 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67850.1	1.5e-23	67.61	Protein of unknown function (DUF707)	[more]
AT1G67850.2	1.5e-23	67.61	Protein of unknown function (DUF707)	[more]
AT3G27470.1	1.9e-23	69.12	Protein of unknown function (DUF707)	[more]
AT3G27470.2	1.9e-23	69.12	Protein of unknown function (DUF707)	[more]
AT1G13000.1	1.4e-21	65.63	Protein of unknown function (DUF707)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007877	Protein of unknown function DUF707	PFAM	PF05212	DUF707	coord: 39..98 e-value: 4.8E-16 score: 58.8
IPR007877	Protein of unknown function DUF707	PANTHER	PTHR31210	OS06G0731900 PROTEIN	coord: 24..97
None	No IPR available	PANTHER	PTHR31210:SF68	LYSINE KETOGLUTARATE REDUCTASE TRANS-SPLICING PROTEIN	coord: 24..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015178.1	HG10015178.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane