HG10015136 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCAAAACAGCAACCAAAGATATCATCACTCTTCGCGGTTCTGCAGCGATTGTCAGCGAGTTCTTCGGTATTTTATGCTTCATTGCCTTCCGAAACCCTTTTAATTCGGTTGATTATCGATGAATAACCTTGGCTGATTTGTTCTTTTTCGTTTTCTTGAAATTTCTCATTTAGGGTATGCTGCAAATAGGTATGAATACTGGATATGCTTTCTCTGTTCTTATTTTTGTTATGGGATCGTGTAAATTTGCATTTTGTCACTTACAAGCGATGTTGATTGTAACTGTGTAGCATCCTTTACAATCGTGGGCTTTATCCGGAAGAAAGTTTTGTTAGGGTTAAGAAATATGGACTTCCTATGTTGCTTACTCAAGATGAAGGTGTTAAGACCTTCATTTCTAATCTAACTGCTCAGCTTTCTGGTTAGTTCCCTTTCTCTAAATGAAAGATTTGTAATTTCCAACAGTTCAGTATTGTATTTTTCTTTTTTCTCTTGCTGTAGTCCAGATTGTAGTGTGATTTATACTTTCCTGAGAATTATATTTATTGAGAAGTTTTGGAATCGTGAAATTGGTTTTAGAATGGCTGGAAGCTGGGAAGTTACAAAGGGTTGTGCTAGTTATAATGAGCAAATCCAACAATGAGGTCCTTGAGAGGTGGAATTTCAGAATCGAAACTGACGGAGAGGTGGTCGAGCAAGGGTATAACAAATTCAACGAAAGATTTCTCTTCCCCTTTCCTAAATTTTCTGGATTTTGTGTTGATTAGATGACATTGTTGCAGTGTGTCGAGGGAAAAGAGTGATAAAGAAATAATGAGGGAGATCCAAGCAATTATGAGACAGATTGCTTCAAGCATCACCTACTTGCCCTGCCTAGATGAACCCTGTAAGTGTTGGCAAAATCTTATATTTTAGTGATTGGTGTAAACATAATGCGATATTGTTTTAGCCGGGTTCTGAGTCCATGAGATGTCTAGTTTCCATTATGAAATTCATTATGCACAACCCTGTAAGTTTTGCTTCAATCATCACTTGCCTGCCTGATCCTTTGTTATTTTGGGGATTGGTTTGACGTGTGAAGGCTTATGTTTTTAGGCTGAGTTATGAATCAGTTGGATGCCATATAAGTTCCAGCATGAAATCATTTCCTTTAATAGCTGATTTGAACATTGCTTGAATGGCTAGGCATAGGCGTATCTTTCTTATGGGAATTAAGTTCAAATCAATACCCTTCTTTTATATTCTAAAAAGAAAATCATTAGTTTCTAATGATTTGCTACGGTCTTAGATGATAATCTAGATGTTTGAGCTCTTTTTCTTTTAGACGATACGATCCATCATGCTCAATCAAGTGTTACTCTGATGTTTTTGTTGTCTCAGGTGTATTTGATGTGTTAGCATATACTGATAAGGATCTTGCAGTTCCATTTACTTGGATGGAGAGTGATCCCAAACTGATTGCTAATCCACAAATGGTGAAGCTGCATTCTTTTGACACAAAGGTGAGGGAATGGGACTTTCGTGCAGGAATATCGAACTTATTTGTTTCCACTAATCTCGATTCGCAGCAAGTAAATTAACTTTTGAATGGTGGTGTCATTGCAGATTCACAAAGTGGACACTCTTGTTTCTTACAAGAATGATGATTGCGATGACGAGTAAAAAACAAAACAAACTCCCTTTTCTTCAATCTGTTGTCGGTTTCAGAATCCTCCAACCCAATCTCGCTTTCAAGGTGGCATTGTGAATCATTTATTCACAATTTTTATTGTACTATAACTTAGGGAACAATGTTGTTGTGGATTCGATTAGAATTCTACCTGAATGAAATGGTTGAGGATTGTTTCTTTTTAAAGAAAACATATTTCTAATTCTACCTGAATGAAATGGTTGAGGATTGTTTCTTTTTAAAGAAAACATATTTCTACGGATAAGGTTGTTGTGTCTTTTAAGAACAAGAGTGGACCAAGTCTTGATCCACTCAGTTTAGCCAAATTCTTCGTTCAAACCAAAGATTTTTGTTCTCTAAATATAACAACCATCCATAATTAGAAACTTCCAAGTAAATTTATCTTGAAAAATCGAAAATTTTGATGAAGCCAAGAGAAGTTGTTGAGAAAAAAGAAAAAGGAAAAAGAAGAATGGGTTTAGATGGTGGTCTGTCTTGGGCAGATCAATGGGATAACAACCCTGACCCTCCACCACCATCTTCATCGGAAAATGAGAAGAAGAAGAACAAGGACGGGTCCTCAGACAAGAGCAAATTTAGGAAGACAATCTTGGGCTTCAAATGGATGAAAGAATTGCGAAAGAAATCTAACAAATCTTGA ATGGCTTCCAAAACAGCAACCAAAGATATCATCACTCTTCGCGGTTCTGCAGCGATTGTCAGCGAGTTCTTCGGGTATGCTGCAAATAGCATCCTTTACAATCGTGGGCTTTATCCGGAAGAAAGTTTTGTTAGGGTTAAGAAATATGGACTTCCTATGTTGCTTACTCAAGATGAAGGTGTTAAGACCTTCATTTCTAATCTAACTGCTCAGCTTTCTGAATGGCTGGAAGCTGGGAAGTTACAAAGGGTTGTGCTAGTTATAATGAGCAAATCCAACAATGAGGTCCTTGAGAGGTGGAATTTCAGAATCGAAACTGACGGAGAGGTGGTCGAGCAAGGTGTGTCGAGGGAAAAGAGTGATAAAGAAATAATGAGGGAGATCCAAGCAATTATGAGACAGATTGCTTCAAGCATCACCTACTTGCCCTGCCTAGATGAACCCTGTGTATTTGATGTGTTAGCATATACTGATAAGGATCTTGCAGTTCCATTTACTTGGATGGAGAGTGATCCCAAACTGATTGCTAATCCACAAATGGTGAAGCTGCATTCTTTTGACACAAAGCCAAGAGAAGTTGTTGAGAAAAAAGAAAAAGGAAAAAGAAGAATGGGTTTAGATGGTGGTCTGTCTTGGGCAGATCAATGGGATAACAACCCTGACCCTCCACCACCATCTTCATCGGAAAATGAGAAGAAGAAGAACAAGGACGGGTCCTCAGACAAGAGCAAATTTAGGAAGACAATCTTGGGCTTCAAATGGATGAAAGAATTGCGAAAGAAATCTAACAAATCTTGA ATGGCTTCCAAAACAGCAACCAAAGATATCATCACTCTTCGCGGTTCTGCAGCGATTGTCAGCGAGTTCTTCGGGTATGCTGCAAATAGCATCCTTTACAATCGTGGGCTTTATCCGGAAGAAAGTTTTGTTAGGGTTAAGAAATATGGACTTCCTATGTTGCTTACTCAAGATGAAGGTGTTAAGACCTTCATTTCTAATCTAACTGCTCAGCTTTCTGAATGGCTGGAAGCTGGGAAGTTACAAAGGGTTGTGCTAGTTATAATGAGCAAATCCAACAATGAGGTCCTTGAGAGGTGGAATTTCAGAATCGAAACTGACGGAGAGGTGGTCGAGCAAGGTGTGTCGAGGGAAAAGAGTGATAAAGAAATAATGAGGGAGATCCAAGCAATTATGAGACAGATTGCTTCAAGCATCACCTACTTGCCCTGCCTAGATGAACCCTGTGTATTTGATGTGTTAGCATATACTGATAAGGATCTTGCAGTTCCATTTACTTGGATGGAGAGTGATCCCAAACTGATTGCTAATCCACAAATGGTGAAGCTGCATTCTTTTGACACAAAGCCAAGAGAAGTTGTTGAGAAAAAAGAAAAAGGAAAAAGAAGAATGGGTTTAGATGGTGGTCTGTCTTGGGCAGATCAATGGGATAACAACCCTGACCCTCCACCACCATCTTCATCGGAAAATGAGAAGAAGAAGAACAAGGACGGGTCCTCAGACAAGAGCAAATTTAGGAAGACAATCTTGGGCTTCAAATGGATGAAAGAATTGCGAAAGAAATCTAACAAATCTTGA MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEGVKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKSDKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQMVKLHSFDTKPREVVEKKEKGKRRMGLDGGLSWADQWDNNPDPPPPSSSENEKKKNKDGSSDKSKFRKTILGFKWMKELRKKSNKS Homology
BLAST of HG10015136 vs. NCBI nr
Match: KAA0034220.1 (mitotic spindle checkpoint protein MAD2 [Cucumis melo var. makuwa]) HSP 1 Score: 460.3 bits (1183), Expect = 1.1e-125 Identity = 244/268 (91.04%), Postives = 250/268 (93.28%), Query Frame = 0
BLAST of HG10015136 vs. NCBI nr
Match: TYK15700.1 (mitotic spindle checkpoint protein MAD2 [Cucumis melo var. makuwa]) HSP 1 Score: 450.7 bits (1158), Expect = 8.9e-123 Identity = 244/304 (80.26%), Postives = 251/304 (82.57%), Query Frame = 0
BLAST of HG10015136 vs. NCBI nr
Match: KAG7012753.1 (Mitotic spindle checkpoint protein MAD2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 419.9 bits (1078), Expect = 1.7e-113 Identity = 230/279 (82.44%), Postives = 240/279 (86.02%), Query Frame = 0
BLAST of HG10015136 vs. NCBI nr
Match: KAE8648685.1 (hypothetical protein Csa_009142 [Cucumis sativus]) HSP 1 Score: 373.2 bits (957), Expect = 1.8e-99 Identity = 190/193 (98.45%), Postives = 191/193 (98.96%), Query Frame = 0
BLAST of HG10015136 vs. NCBI nr
Match: XP_004135301.1 (mitotic spindle checkpoint protein MAD2 [Cucumis sativus]) HSP 1 Score: 373.2 bits (957), Expect = 1.8e-99 Identity = 190/193 (98.45%), Postives = 191/193 (98.96%), Query Frame = 0
BLAST of HG10015136 vs. ExPASy Swiss-Prot
Match: Q9LU93 (Mitotic spindle checkpoint protein MAD2 OS=Arabidopsis thaliana OX=3702 GN=MAD2 PE=1 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 7.4e-88 Identity = 164/194 (84.54%), Postives = 179/194 (92.27%), Query Frame = 0
BLAST of HG10015136 vs. ExPASy Swiss-Prot
Match: Q9XFH3 (Mitotic spindle checkpoint protein MAD2 OS=Zea mays OX=4577 GN=MAD2 PE=2 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 1.7e-84 Identity = 158/193 (81.87%), Postives = 174/193 (90.16%), Query Frame = 0
BLAST of HG10015136 vs. ExPASy Swiss-Prot
Match: Q556Y9 (Mitotic spindle assembly checkpoint protein MAD2A OS=Dictyostelium discoideum OX=44689 GN=mad2l1-1 PE=3 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.9e-51 Identity = 105/194 (54.12%), Postives = 136/194 (70.10%), Query Frame = 0
BLAST of HG10015136 vs. ExPASy Swiss-Prot
Match: Q9Z1B5 (Mitotic spindle assembly checkpoint protein MAD2A OS=Mus musculus OX=10090 GN=Mad2l1 PE=1 SV=2) HSP 1 Score: 191.8 bits (486), Expect = 9.8e-48 Identity = 97/193 (50.26%), Postives = 131/193 (67.88%), Query Frame = 0
BLAST of HG10015136 vs. ExPASy Swiss-Prot
Match: Q13257 (Mitotic spindle assembly checkpoint protein MAD2A OS=Homo sapiens OX=9606 GN=MAD2L1 PE=1 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.7e-45 Identity = 92/193 (47.67%), Postives = 129/193 (66.84%), Query Frame = 0
BLAST of HG10015136 vs. ExPASy TrEMBL
Match: A0A5A7STC2 (Mitotic spindle checkpoint protein MAD2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G002160 PE=3 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 5.4e-126 Identity = 244/268 (91.04%), Postives = 250/268 (93.28%), Query Frame = 0
BLAST of HG10015136 vs. ExPASy TrEMBL
Match: A0A5D3CWF2 (Mitotic spindle checkpoint protein MAD2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001990 PE=3 SV=1) HSP 1 Score: 450.7 bits (1158), Expect = 4.3e-123 Identity = 244/304 (80.26%), Postives = 251/304 (82.57%), Query Frame = 0
BLAST of HG10015136 vs. ExPASy TrEMBL
Match: A0A0A0KPY5 (HORMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G590170 PE=3 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 8.8e-100 Identity = 190/193 (98.45%), Postives = 191/193 (98.96%), Query Frame = 0
BLAST of HG10015136 vs. ExPASy TrEMBL
Match: A0A1S3BDR9 (mitotic spindle checkpoint protein MAD2 OS=Cucumis melo OX=3656 GN=LOC103488916 PE=3 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 2.5e-99 Identity = 189/193 (97.93%), Postives = 191/193 (98.96%), Query Frame = 0
BLAST of HG10015136 vs. ExPASy TrEMBL
Match: A0A6J1HTK5 (mitotic spindle checkpoint protein MAD2 OS=Cucurbita maxima OX=3661 GN=LOC111466640 PE=3 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 4.8e-98 Identity = 186/193 (96.37%), Postives = 190/193 (98.45%), Query Frame = 0
BLAST of HG10015136 vs. TAIR 10
Match: AT3G25980.1 (DNA-binding HORMA family protein ) HSP 1 Score: 325.1 bits (832), Expect = 5.3e-89 Identity = 164/194 (84.54%), Postives = 179/194 (92.27%), Query Frame = 0
BLAST of HG10015136 vs. TAIR 10
Match: AT3G25980.2 (DNA-binding HORMA family protein ) HSP 1 Score: 310.1 bits (793), Expect = 1.8e-84 Identity = 159/194 (81.96%), Postives = 175/194 (90.21%), Query Frame = 0
BLAST of HG10015136 vs. TAIR 10
Match: AT1G67670.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24405.1); Has 18 Blast hits to 18 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 69.7 bits (169), Expect = 4.0e-12 Identity = 42/66 (63.64%), Postives = 47/66 (71.21%), Query Frame = 0
BLAST of HG10015136 vs. TAIR 10
Match: AT1G24405.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 7.5e-11 Identity = 41/64 (64.06%), Postives = 46/64 (71.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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