HG10015088 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015088
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	60S ribosomal protein L5
Location	Chr02: 23747715 .. 23751370 (+)
RNA-Seq Expression	HG10015088
Synteny	HG10015088

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGAGAGTTTCTTCTTGCTTTTTTCTGGTTCTCCCTATTTGATTTTCTCTGTACTTGTAGATTTCATTTTACGCAAGTTTAGGGTTCACTTCTTTTTAGCTATACTGAGGTTGAGGACTGTTCTTTCTTACTGGCTCCCCTTTTTGGTCACTCGTCTCTTAGGTTTAATTTTTTATCATCCCGCTTCACAAAATTGTATTGATTGACTTCGCAGAGCTAGCGCCTTTTTATTTTCTCGTTTTTGGGTGCCATTGATTTATTATGTTTCAATGTTGACGAGCTGTTTATTGTAGGCTTTTGCCAAAGCTCAGAAAACAAAGGCCTACTTCAAGCGTTATCAAGTCAAGTTTAAGAGAAGAAGAGGTGATTTTTCCACCATACAAAAACATATGTTTTTGGTTTCTTTCAAGCTTTTTGATAGTCGTTTTTTTTATATTTACAGAGGGTAAGACTGACTATCGGGCCAGAATCCGTCTTATTAATCAAGACAAGAACAAATACAATACTCCCAAGTATCGCTTTGTTGTCCGAACTGTATCCTTAGAAAGATATGAATCTGAATATTTTGTAGAAATTTACTAATTTATTTCGTGTGAAGCCTGGAGAATATTTTGTAGAAATTTACTAATTTATTTCGTGTGAAGCCTGGATAATGCAAATGCAATATCCCCTGTCTGTTGAGTTCTTTTTATGTTTATTATTCCAGTTATACACCTAATTTAATGAATCATGGGATGTATATCCTTGACGTCATTCAATAGTCGAACAAAGATATTACAGCTCAAATTATTTCCGCTAGCATTGCTGGTGACTTGGTCCTTGCTTCGGCTTATTCTCATGAGCTTCCCAGTTATGGGCTTGAAGTTGGTCTCACCAACTATGCTGCAGGTGTGTGTCATTACTGTACTTTATTTGTAATATCCCTACTAACTCATCTAATATTATGTACAATTCTTTTATAACTGTTCAGCATACTGCACTGGACTTCTCTTGGCTCGAAGGGTCTTGAAAATGCTTGAGATGGATGACGAATATGAGGGCAATGTGGAGGTATATTGAATCTTCATGGTTTCCTCTCTCCCTATATCTATCATATTCATAATTTTCTGAAAATCATTATCCCACATACATAGGCTACTGGTGAAGATTTCTCAGTTGAGCCAGCAGACACCAGAAGGCCATTCCGCGCTCTCCTCGATGGTGGTCTTATCAGAACTACAACTGGAAATCGCGTTTTTGGTGCCCTGAAGGTAACTCGGCTGCGTAATCATTTTCTAGGTCATCAGTTGGATAATATCATCATCATCTGTTTATTTAGCTTATGTTGTGTTGGTATCAATATGTTCTGAGGATGTTGGACAATTCTTTGCATATCCAATCTTGACCTTTGTTTCAAGGAGAACTGGTTCTCTTTGTTATTTAATTGCGTTCGTTATCATCATCTGGTTTTAGAACCATTTCACTGTTCTGTAATTTTTCAGCTGATTGTAGTTCTATGTCTGGGTGAAATTTGAATTGGTAATATAAAAGAATTGGGTTTCCCATCTTGTTGCTTTAGATGGATGATGGTTTTGTCATTGAATGTGGCGCTTGTGAAGGATTGCAATGAATCTCAATTTTGTAAAACGCAGGGAGCTTTGGATGGTGGATTGGAACTTCCTCACAGTGAAAAGAGGTTTGCTGGGTATTCCAAGGATAAGCAGCTTGATGCTGAAGTTCAAAGGAAGTACATTTTTGGTGGACATGTTGCTGCCTACATGCGTGTAAGCCTTGTCTGTTTGTTTGATTTACATGAGTTTCTTTTTTCATCATTCAGAAAAAAGTTGATCAACAAATTTTGCTTTTCTGATTGCTTAACTTTTAGACCTTGATGGAAGACGAGCCAGAGAAATATCAATCTCACTTCAGCGCATACATCAAGAAGGGCATTGAGGCTGATGACATTGATGTTCTATACAAGAAAGTTCATGCTGCCATTCGTGCAAACCCATTAGTGAAGAAATCTGACAAGCCACAACCCAAGGCACACAAGAGGTAGAAGCCTAGCTCGAGTTTTTGACAACTGATTGAAAAATTGTTCTAGAGACTCTTTTCTTTTTTTGTTGGGCATTGCTTATATAACTTTTCCTTTTGTGTTTGTTTGATGATGATAGGTACAACTTGAAGAAGCTGACATACGATGAAAGAAAAGCCCGATTGGTCGAGCGCTTGAATGCACTTAACTCTGCAGCCGACGCCGACGACGATGATGAGGATGACGAGTGCAAGATGAAAATTATGAAACAACTTGAGTTGGTGTCCGCATCCAAGGATTTTATTGCAGTTCTGTTTATAGATTATTTTTAAGTTTCCTTTGTTGGTCTAGACTTTTTCATATCTTTGGAGTGTTCTGTTACTTAGATAACGATGGTTTTGCTATCTCGACTTTATCACTTTTTGGAACCAGCCATAATCTCTTCTAATGCAAAACAAGTTTTGACTTTAACTATATTTGTGCGTTATTGAAATAGCATTCATGGCAATTTATATTTTACTATCGAATCTTTTACGAAATTAGATTGTGACATTAGTTAATATTATTACCTTTTGGATATGAAGTAAACTTATGCTATCAGGGAAATCTAGACGAATGTTTATTTTGTTGAAGGACTTTTTTCAGGTTCATCAATGAGTTACTATTTTTGAAATGAAAAATAGTTTAATTAAATGATTACTGTTTCCGTAGTATAAAATTTGGAGTGATGCGATATTTATATTAATAAATGGATGAATTGACTTGAAAAATGTAGTATAATTGTATAACCAAAGCATATTAAAAATGGTAGGTTGCCAATTAAAACTTAGCTCAACTAGCATTTGAGTGTACTACTACGAGATTTATAGTTTGAATTTTTACCCTTAATTGTACTAAAGAAAATGATTTGTTATTTGTTACTTCTGGGACTGAAAATTTATTAGGATCATAATTTTGGTTCATTTTTACACGTTAAAATGGGAAGAGAGAATTGGGTCCACAACTACAGCGCCTTATCCATTACTGACCAATAGATTTCAATAACCATACTCTTCAGAAGCCCCTTGCGATATCCTCTTTGTAATCGACTGCCAATGTCACAGCCGCTCTCTTGTGCTCTACCAGAGCAGCAAACACACGATGTTCTTATCAAAGGCTTCCGAATCTGCAGGCTCGCAGCGACGTATGCAACGGAATGCCAGAACATAGCCCTCTCATCTCCCGCAGGTACAAGGCCAATGCGAGTAATATCTATTGGCCATATGGGTTTTTTGTGTTCAAATTCCTCTCAAATTATCAGCCACATCTAACAAATGTGGTGTGGCTCAAAATTGCAGAAACGCTGCCTTGATCTTGACAGGGGCAATTGCTGGGGCGTGAATGTGGTTGACCAGAGTAGAAACGCTGCCTTGATCTTGACAGGGGCAATGCTGCTGGGAGTGAATGTGGTTGACCAGAGTGCAGAGGCGGCTGCCAGAAGGCCGCCACCACCTCCACCGCAAGAGAAGAAGGATCCCAATCTGAGTGGAGTTCAGGCAAAAGTGCTAGCTAGTAAAAAGAGGAAGGAAGCGCTGAAAGAAGCTACGGCCAAGCTAAGAGCGCAAGGGAAGCCTGTTGACCAACCACCACCTGAATAA

mRNA sequence

ATGGCTTTTGCCAAAGCTCAGAAAACAAAGGCCTACTTCAAGCGTTATCAAGTCAAGTTTAAGAGAAGAAGAGAGGGTAAGACTGACTATCGGGCCAGAATCCGTCTTATTAATCAAGACAAGAACAAATACAATACTCCCAAGTATCGCTTTGTTGTCCGAACTTCGAACAAAGATATTACAGCTCAAATTATTTCCGCTAGCATTGCTGGTGACTTGGTCCTTGCTTCGGCTTATTCTCATGAGCTTCCCAGTTATGGGCTTGAAGTTGGTCTCACCAACTATGCTGCAGCATACTGCACTGGACTTCTCTTGGCTCGAAGGGTCTTGAAAATGCTTGAGATGGATGACGAATATGAGGGCAATGTGGAGGCTACTGGTGAAGATTTCTCAGTTGAGCCAGCAGACACCAGAAGGCCATTCCGCGCTCTCCTCGATGGTGGTCTTATCAGAACTACAACTGGAAATCGCGTTTTTGGTGCCCTGAAGGGAGCTTTGGATGGTGGATTGGAACTTCCTCACAGTGAAAAGAGGTTTGCTGGGTATTCCAAGGATAAGCAGCTTGATGCTGAAGTTCAAAGGAAGTACATTTTTGGTGGACATGTTGCTGCCTACATGCGTACCTTGATGGAAGACGAGCCAGAGAAATATCAATCTCACTTCAGCGCATACATCAAGAAGGGCATTGAGGCTGATGACATTGATGTTCTATACAAGAAAGTTCATGCTGCCATTCGTGCAAACCCATTAGTGAAGAAATCTGACAAGCCACAACCCAAGGCACACAAGAGGTACAACTTGAAGAAGCTGACATACGATGAAAGAAAAGCCCGATTGGTCGAGCGCTTGAATGCACTTAACTCTGCAGCCGACGCCGACGACGATGATGAGGATGACGAGTGCAAGATGAAAATTATGAAACAACTTGAGTTGCCGCTCTCTTGTGCTCTACCAGAGCAGCAAACACACGATGTTCTTATCAAAGGCTTCCGAATCTGCAGGCTCGCAGCGACGTATGCAACGGAATGCCAGAACATAGCCCTCTCATCTCCCGCAGGTACAAGGCCAATGCGAAAACGCTGCCTTGATCTTGACAGGGGCAATTGCTGGGGCGTGAATGTGGTTGACCAGAGTAGAAACGCTGCCTTGATCTTGACAGGGGCAATGCTGCTGGGAGTGAATGTGGTTGACCAGAGTGCAGAGGCGGCTGCCAGAAGGCCGCCACCACCTCCACCGCAAGAGAAGAAGGATCCCAATCTGAGTGGAGTTCAGGCAAAAGTGCTAGCTAGTAAAAAGAGGAAGGAAGCGCTGAAAGAAGCTACGGCCAAGCTAAGAGCGCAAGGGAAGCCTGTTGACCAACCACCACCTGAATAA

Coding sequence (CDS)

ATGGCTTTTGCCAAAGCTCAGAAAACAAAGGCCTACTTCAAGCGTTATCAAGTCAAGTTTAAGAGAAGAAGAGAGGGTAAGACTGACTATCGGGCCAGAATCCGTCTTATTAATCAAGACAAGAACAAATACAATACTCCCAAGTATCGCTTTGTTGTCCGAACTTCGAACAAAGATATTACAGCTCAAATTATTTCCGCTAGCATTGCTGGTGACTTGGTCCTTGCTTCGGCTTATTCTCATGAGCTTCCCAGTTATGGGCTTGAAGTTGGTCTCACCAACTATGCTGCAGCATACTGCACTGGACTTCTCTTGGCTCGAAGGGTCTTGAAAATGCTTGAGATGGATGACGAATATGAGGGCAATGTGGAGGCTACTGGTGAAGATTTCTCAGTTGAGCCAGCAGACACCAGAAGGCCATTCCGCGCTCTCCTCGATGGTGGTCTTATCAGAACTACAACTGGAAATCGCGTTTTTGGTGCCCTGAAGGGAGCTTTGGATGGTGGATTGGAACTTCCTCACAGTGAAAAGAGGTTTGCTGGGTATTCCAAGGATAAGCAGCTTGATGCTGAAGTTCAAAGGAAGTACATTTTTGGTGGACATGTTGCTGCCTACATGCGTACCTTGATGGAAGACGAGCCAGAGAAATATCAATCTCACTTCAGCGCATACATCAAGAAGGGCATTGAGGCTGATGACATTGATGTTCTATACAAGAAAGTTCATGCTGCCATTCGTGCAAACCCATTAGTGAAGAAATCTGACAAGCCACAACCCAAGGCACACAAGAGGTACAACTTGAAGAAGCTGACATACGATGAAAGAAAAGCCCGATTGGTCGAGCGCTTGAATGCACTTAACTCTGCAGCCGACGCCGACGACGATGATGAGGATGACGAGTGCAAGATGAAAATTATGAAACAACTTGAGTTGCCGCTCTCTTGTGCTCTACCAGAGCAGCAAACACACGATGTTCTTATCAAAGGCTTCCGAATCTGCAGGCTCGCAGCGACGTATGCAACGGAATGCCAGAACATAGCCCTCTCATCTCCCGCAGGTACAAGGCCAATGCGAAAACGCTGCCTTGATCTTGACAGGGGCAATTGCTGGGGCGTGAATGTGGTTGACCAGAGTAGAAACGCTGCCTTGATCTTGACAGGGGCAATGCTGCTGGGAGTGAATGTGGTTGACCAGAGTGCAGAGGCGGCTGCCAGAAGGCCGCCACCACCTCCACCGCAAGAGAAGAAGGATCCCAATCTGAGTGGAGTTCAGGCAAAAGTGCTAGCTAGTAAAAAGAGGAAGGAAGCGCTGAAAGAAGCTACGGCCAAGCTAAGAGCGCAAGGGAAGCCTGTTGACCAACCACCACCTGAATAA

Protein sequence

MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDITAQIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFAGYSKDKQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYKKVHAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADADDDDEDDECKMKIMKQLELPLSCALPEQQTHDVLIKGFRICRLAATYATECQNIALSSPAGTRPMRKRCLDLDRGNCWGVNVVDQSRNAALILTGAMLLGVNVVDQSAEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEATAKLRAQGKPVDQPPPE

Homology

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BLAST of HG10015088 vs. NCBI nr
Match: TKS11744.1 (60S ribosomal protein L5-like [Populus alba])

HSP 1 Score: 559.7 bits (1441), Expect = 2.3e-155
Identity = 312/455 (68.57%), Postives = 352/455 (77.36%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60
           MA+AKAQK+KAY KR+QVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVR SNKDI
Sbjct: 1   MAYAKAQKSKAYSKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFSNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
            AQI SASI GD VLASAY+HELP YGLEVGLTNYAAAYCTGLLLARRVLKMLEMD+EYE
Sbjct: 61  VAQITSASITGDTVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYE 120

Query: 121 GNVEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFA 180
           GNVEATGEDFSVEPADTRRPFRALLD GL+RTTTGNRVFGALKGALDGGL++PHSEKRFA
Sbjct: 121 GNVEATGEDFSVEPADTRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDIPHSEKRFA 180

Query: 181 GYSKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYK 240
           G+ KD KQLDAEV RKYI+GGHVAAYMRTLMEDEPEKYQ+HFS YIK+ I+AD ++ LYK
Sbjct: 181 GFGKDNKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKREIDADCMEALYK 240

Query: 241 KVHAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADADDDDEDD 300
           KVHAAIRA+P  KKS+K  PK HKRYNLKKLTY+ERK +LVERLN  NSAAD +DDD   
Sbjct: 241 KVHAAIRADPTTKKSEKQPPKEHKRYNLKKLTYEERKEKLVERLNTFNSAADDEDDDYHG 300

Query: 301 ECKMKIMKQLELPLSCALPEQQTHDVLIKGFRICRLAATYATECQNIALSSPAGTRPMRK 360
           +   K               ++T  V   GF+  R+ A +         S P        
Sbjct: 301 KTYSK--------------SKKTSPVPSPGFQ--RVRACHGD-------SKP-------- 360

Query: 361 RCLDLDRGNCWGVNVVDQSRNAALILTGAMLLGVNVVDQSAEAAARRPPPPPPQEKKDPN 420
                     +  N +   R  AL L GA L G+N+   +A AAA+RPPPPPP EKKDP+
Sbjct: 361 ----------FSDNKLVHRRTIALGLAGA-LTGLNIGGWNANAAAKRPPPPPPGEKKDPS 413

Query: 421 LSGVQAKVLASKKRKEALKEATAKLRAQGKPVDQP 455
           +SG+QAKVLASKKRKEA+KE  A+LR +GK V++P
Sbjct: 421 ISGLQAKVLASKKRKEAMKEEVARLREKGKAVNEP 413

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BLAST of HG10015088 vs. NCBI nr
Match: XP_038877881.1 (60S ribosomal protein L5 [Benincasa hispida])

HSP 1 Score: 548.5 bits (1412), Expect = 5.4e-152
Identity = 283/301 (94.02%), Postives = 291/301 (96.68%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELP YGLEVGLTNYAAAYCTGLLLARRVLKMLEMD EYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120

Query: 121 GNVEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFA 180
           GNVEATGED+SVEPADTRRPFRALLD GLIRTTTGNRVFGALKGALDGGL++PHS+KRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GYSKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYK 240
           GY+KD KQLDAEV RKYIFGGHVAAYMRTLMEDEPEKYQSHFS YIKKGIEADDI+ LYK
Sbjct: 181 GYTKDGKQLDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSQYIKKGIEADDIEGLYK 240

Query: 241 KVHAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADADDDDEDD 300
           KVHAAIRA+P  KKSDKPQPK HKRYNLKKLTYDERKA+LVERLNALNSAADADDDDEDD
Sbjct: 241 KVHAAIRADPSAKKSDKPQPKTHKRYNLKKLTYDERKAQLVERLNALNSAADADDDDEDD 300

[Close]

BLAST of HG10015088 vs. NCBI nr
Match: RXI05542.1 (hypothetical protein DVH24_017584 [Malus domestica])

HSP 1 Score: 543.9 bits (1400), Expect = 1.3e-150
Identity = 301/457 (65.86%), Postives = 354/457 (77.46%), Query Frame = 0


Query: 3    FAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDITA 62
            F K+QK++AYFKR+QVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFV   +NKDI A
Sbjct: 1636 FVKSQKSRAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFV---TNKDIVA 1695

Query: 63   QIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGN 122
            QI+SASIAGDLVLA+AY+HELP YGLEVGLTNYAAAYCTGLLLARRVLK LEMDDEYEGN
Sbjct: 1696 QIVSASIAGDLVLAAAYAHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYEGN 1755

Query: 123  VEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFAGY 182
            VEATGED+SVEPA++RRPFRALLD GLIRTTTGNRVFGALKGALDGGL++PHSEKRFAG+
Sbjct: 1756 VEATGEDYSVEPAESRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSEKRFAGF 1815

Query: 183  SKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYKKV 242
            SKD KQLDAEV RKYI+GGHVAAYM TL +DEPEK+QSHFS YIKKGIEAD+I+ LYKKV
Sbjct: 1816 SKDSKQLDAEVHRKYIYGGHVAAYMTTLADDEPEKFQSHFSEYIKKGIEADNIEELYKKV 1875

Query: 243  HAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADADDDDEDDEC 302
            HAAIRA+P +KK++KP P+ HKRYNLKKLT+DERK +LVERL A N A + ++ D+DDE 
Sbjct: 1876 HAAIRADPTIKKTEKPAPQEHKRYNLKKLTFDERKKKLVERLKAFNEAGNDENSDDDDEL 1935

Query: 303  KMKIMKQLELPLSCALPEQQTHDVLIKGFRICRLAAT--YATECQNIALSSPAGTRPMRK 362
                ++   LP     P QQ      +  ++ RL  T    +E   + +  P    P RK
Sbjct: 1936 WRIHLRHRHLP-----PPQQQQS---QRRQLTRLPVTGRLVSEMSVLPIKLPMTLMP-RK 1995

Query: 363  RCLDLDRGNCWGVNVVDQSRNAALILTGAMLLGVNVVDQSAEAAARRPPPPPPQ--EKKD 422
                +  G                +   A+   V+  + SA AAARRPPPPP +  EK+D
Sbjct: 1996 IISTVGLG----------------LAAAALSFNVSNPNSSANAAARRPPPPPAEEKEKRD 2055

Query: 423  PNLSGVQAKVLASKKRKEALKEATAKLRAQGKPVDQP 455
            PN+SGV AKVLASKKRKEA+K++ AKLR +GKP+ +P
Sbjct: 2056 PNVSGVLAKVLASKKRKEAMKQSVAKLRDKGKPIQEP 2064

[Close]

BLAST of HG10015088 vs. NCBI nr
Match: XP_023528472.1 (60S ribosomal protein L5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 543.5 bits (1399), Expect = 1.7e-150
Identity = 278/301 (92.36%), Postives = 293/301 (97.34%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVR SNKD+
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFSNKDV 60

Query: 61  TAQIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELP YGLEVGLTNYAAAYCTGLLLARRVLKMLEMD+EYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYE 120

Query: 121 GNVEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFA 180
           GNVEATGED+SVEPADTRRPFRALLD GL++TTTGNRVFGALKGALDGGL++PHSEKRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSEKRFA 180

Query: 181 GYSKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYK 240
           G+SKD KQLDAEV RKYIFGGHVAAYMRTLMEDEPEKYQSHFS YIKKGIEAD+I+ LYK
Sbjct: 181 GFSKDGKQLDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSQYIKKGIEADNIEGLYK 240

Query: 241 KVHAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADADDDDEDD 300
           KVHAAIRA+P+VKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNS A+AD+DD+DD
Sbjct: 241 KVHAAIRADPIVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSKANADEDDDDD 300

[Close]

BLAST of HG10015088 vs. NCBI nr
Match: XP_008446013.1 (PREDICTED: 60S ribosomal protein L5 [Cucumis melo] >KAA0034176.1 60S ribosomal protein L5 [Cucumis melo var. makuwa] >TYK15743.1 60S ribosomal protein L5 [Cucumis melo var. makuwa])

HSP 1 Score: 543.1 bits (1398), Expect = 2.3e-150
Identity = 282/303 (93.07%), Postives = 291/303 (96.04%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELP YGLEVGLTNYAAAYCTGLLLARRVLKMLEMD EYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120

Query: 121 GNVEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFA 180
           GNVEATGED+SVEPADTRRPFRALLD GLIRTTTGNRVFGALKGALDGGL++PHS+KRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GYSKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYK 240
           GY+K+ +QLD EV RKYIFGGHVAAYMRTLMEDEPEKYQSHFS YIKKGIEADD++ LYK
Sbjct: 181 GYTKNSQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADDLEGLYK 240

Query: 241 KVHAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADA--DDDDE 300
           KVHAAIRANP VKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAAD   DDDDE
Sbjct: 241 KVHAAIRANPTVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADGDEDDDDE 300

[Close]

BLAST of HG10015088 vs. ExPASy Swiss-Prot
Match: Q6UNT2 (60S ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=RPL5 PE=2 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 3.9e-153
Identity = 277/301 (92.03%), Postives = 291/301 (96.68%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELP YGLEVGLTNYAAAYCTGLLLARRVLKMLEMD EYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120

Query: 121 GNVEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFA 180
           GNVEATGED+SVEPADTRRPFRALLD GLIRTTTGNRVFGALKGALDGGL++PHS+KRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GYSKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYK 240
           GY+K+ +QLD EV RKYIFGGHVAAYMRTLMEDEPEKYQSHFS YIKKGIEAD+++ LYK
Sbjct: 181 GYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADELEGLYK 240

Query: 241 KVHAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADADDDDEDD 300
           KVHAAIRANP+ KKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAAD DDDD++D
Sbjct: 241 KVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADGDDDDDED 300

[Close]

BLAST of HG10015088 vs. ExPASy Swiss-Prot
Match: Q8LBI1 (60S ribosomal protein L5-1 OS=Arabidopsis thaliana OX=3702 GN=RPL5A PE=1 SV=2)

HSP 1 Score: 474.6 bits (1220), Expect = 1.3e-132
Identity = 241/301 (80.07%), Postives = 269/301 (89.37%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60
           M F K+ K+ AYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVR +NKDI
Sbjct: 1   MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
            AQI+SASIAGD+V ASAY+HELP YGL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYE
Sbjct: 61  VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 121 GNVEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFA 180
           GNVEATGEDFSVEP D+RRPFRALLD GLIRTTTGNRVFGALKGALDGGL++PHS+KRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GYSKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYK 240
           G+ K+ KQLDAE+ R YI+GGHV+ YM+ L EDEPEK Q+HFSAYIKKG+EA+ I+ LYK
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYK 240

Query: 241 KVHAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADADDDDEDD 300
           KVHAAIRA+P  KK+ KP PK HKRYNLKKLTY+ERK +L+ER+ ALN A   DDDDEDD
Sbjct: 241 KVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAG-GDDDDEDD 300

[Close]

BLAST of HG10015088 vs. ExPASy Swiss-Prot
Match: P49227 (60S ribosomal protein L5-2 OS=Arabidopsis thaliana OX=3702 GN=RPL5B PE=2 SV=3)

HSP 1 Score: 472.2 bits (1214), Expect = 6.5e-132
Identity = 239/301 (79.40%), Postives = 268/301 (89.04%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60
           M F K+ K+ AYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVR +NKDI
Sbjct: 1   MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
            AQI+SASIAGD+V ASAY+HELP YGL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYE
Sbjct: 61  VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 121 GNVEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFA 180
           GNVEATGEDFSVEP D+RRPFRALLD GLIRTTTGNRVFGALKGALDGGL++PHS+KRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GYSKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYK 240
           G+ K+ KQLDAE+ R YI+GGHV+ YM+ L EDEPEK Q+HFSAYIKKG+EA+ I+ +YK
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYK 240

Query: 241 KVHAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADADDDDEDD 300
           KVHAAIRA P  KK++K  PK HKRYNLKKLTY+ERK +L+ER+ ALN A   DDDDEDD
Sbjct: 241 KVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAG-GDDDDEDD 300

[Close]

BLAST of HG10015088 vs. ExPASy Swiss-Prot
Match: A2WXX3 (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica OX=39946 GN=RPL5A PE=3 SV=2)

HSP 1 Score: 468.4 bits (1204), Expect = 9.3e-131
Identity = 231/299 (77.26%), Postives = 270/299 (90.30%), Query Frame = 0


Query: 3   FAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDITA 62
           F K QKT AY+KR+QVKFKRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVR +NKDITA
Sbjct: 4   FVKTQKTNAYYKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITA 63

Query: 63  QIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGN 122
           QI+ A+IAGD+V+A+AYSHELP YGLEVGLTNYAAAYCTGLLLARRVLK+  +D EYEGN
Sbjct: 64  QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGN 123

Query: 123 VEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFAGY 182
           +EATGED+ VEPAD RRPFRALLD GLIRTTTGNRVFGALKGALDGGL++PHS+KRFAG+
Sbjct: 124 IEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 183

Query: 183 SKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYKKV 242
            KD KQLD+++ RKYI+GGHVA YMR++ E+EPEK+Q+HFS Y+KKGI+AD ++ LYKKV
Sbjct: 184 KKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKV 243

Query: 243 HAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADADDDDEDDE 301
           HAAIRA+P + KS K +P  HKRYNLKKLTY++RKA LVERLNALNS+A ADDDDE+++
Sbjct: 244 HAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDDDEEED 302

[Close]

BLAST of HG10015088 vs. ExPASy Swiss-Prot
Match: Q0JGY1 (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL5A PE=2 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 2.7e-130
Identity = 231/299 (77.26%), Postives = 269/299 (89.97%), Query Frame = 0


Query: 3   FAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDITA 62
           F K QKT AY KR+QVKFKRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVR +NKDITA
Sbjct: 4   FVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITA 63

Query: 63  QIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGN 122
           QI+ A+IAGD+V+A+AYSHELP YGLEVGLTNYAAAYCTGLLLARRVLK+  +D EYEGN
Sbjct: 64  QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGN 123

Query: 123 VEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFAGY 182
           +EATGED+ VEPAD RRPFRALLD GLIRTTTGNRVFGALKGALDGGL++PHS+KRFAG+
Sbjct: 124 IEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 183

Query: 183 SKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYKKV 242
            KD KQLD+++ RKYI+GGHVA YMR++ E+EPEK+Q+HFS Y+KKGI+AD ++ LYKKV
Sbjct: 184 KKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKV 243

Query: 243 HAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADADDDDEDDE 301
           HAAIRA+P + KS K +P  HKRYNLKKLTY++RKA LVERLNALNS+A ADDDDE+++
Sbjct: 244 HAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDDDEEED 302

[Close]

BLAST of HG10015088 vs. ExPASy TrEMBL
Match: A0A4U5QLV1 (60S ribosomal protein L5-like OS=Populus alba OX=43335 GN=D5086_0000070420 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 1.1e-155
Identity = 312/455 (68.57%), Postives = 352/455 (77.36%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60
           MA+AKAQK+KAY KR+QVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVR SNKDI
Sbjct: 1   MAYAKAQKSKAYSKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFSNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
            AQI SASI GD VLASAY+HELP YGLEVGLTNYAAAYCTGLLLARRVLKMLEMD+EYE
Sbjct: 61  VAQITSASITGDTVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYE 120

Query: 121 GNVEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFA 180
           GNVEATGEDFSVEPADTRRPFRALLD GL+RTTTGNRVFGALKGALDGGL++PHSEKRFA
Sbjct: 121 GNVEATGEDFSVEPADTRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDIPHSEKRFA 180

Query: 181 GYSKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYK 240
           G+ KD KQLDAEV RKYI+GGHVAAYMRTLMEDEPEKYQ+HFS YIK+ I+AD ++ LYK
Sbjct: 181 GFGKDNKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKREIDADCMEALYK 240

Query: 241 KVHAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADADDDDEDD 300
           KVHAAIRA+P  KKS+K  PK HKRYNLKKLTY+ERK +LVERLN  NSAAD +DDD   
Sbjct: 241 KVHAAIRADPTTKKSEKQPPKEHKRYNLKKLTYEERKEKLVERLNTFNSAADDEDDDYHG 300

Query: 301 ECKMKIMKQLELPLSCALPEQQTHDVLIKGFRICRLAATYATECQNIALSSPAGTRPMRK 360
           +   K               ++T  V   GF+  R+ A +         S P        
Sbjct: 301 KTYSK--------------SKKTSPVPSPGFQ--RVRACHGD-------SKP-------- 360

Query: 361 RCLDLDRGNCWGVNVVDQSRNAALILTGAMLLGVNVVDQSAEAAARRPPPPPPQEKKDPN 420
                     +  N +   R  AL L GA L G+N+   +A AAA+RPPPPPP EKKDP+
Sbjct: 361 ----------FSDNKLVHRRTIALGLAGA-LTGLNIGGWNANAAAKRPPPPPPGEKKDPS 413

Query: 421 LSGVQAKVLASKKRKEALKEATAKLRAQGKPVDQP 455
           +SG+QAKVLASKKRKEA+KE  A+LR +GK V++P
Sbjct: 421 ISGLQAKVLASKKRKEAMKEEVARLREKGKAVNEP 413

[Close]

BLAST of HG10015088 vs. ExPASy TrEMBL
Match: A0A498KIZ4 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_017584 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 6.5e-151
Identity = 301/457 (65.86%), Postives = 354/457 (77.46%), Query Frame = 0


Query: 3    FAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDITA 62
            F K+QK++AYFKR+QVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFV   +NKDI A
Sbjct: 1636 FVKSQKSRAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFV---TNKDIVA 1695

Query: 63   QIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGN 122
            QI+SASIAGDLVLA+AY+HELP YGLEVGLTNYAAAYCTGLLLARRVLK LEMDDEYEGN
Sbjct: 1696 QIVSASIAGDLVLAAAYAHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYEGN 1755

Query: 123  VEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFAGY 182
            VEATGED+SVEPA++RRPFRALLD GLIRTTTGNRVFGALKGALDGGL++PHSEKRFAG+
Sbjct: 1756 VEATGEDYSVEPAESRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSEKRFAGF 1815

Query: 183  SKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYKKV 242
            SKD KQLDAEV RKYI+GGHVAAYM TL +DEPEK+QSHFS YIKKGIEAD+I+ LYKKV
Sbjct: 1816 SKDSKQLDAEVHRKYIYGGHVAAYMTTLADDEPEKFQSHFSEYIKKGIEADNIEELYKKV 1875

Query: 243  HAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADADDDDEDDEC 302
            HAAIRA+P +KK++KP P+ HKRYNLKKLT+DERK +LVERL A N A + ++ D+DDE 
Sbjct: 1876 HAAIRADPTIKKTEKPAPQEHKRYNLKKLTFDERKKKLVERLKAFNEAGNDENSDDDDEL 1935

Query: 303  KMKIMKQLELPLSCALPEQQTHDVLIKGFRICRLAAT--YATECQNIALSSPAGTRPMRK 362
                ++   LP     P QQ      +  ++ RL  T    +E   + +  P    P RK
Sbjct: 1936 WRIHLRHRHLP-----PPQQQQS---QRRQLTRLPVTGRLVSEMSVLPIKLPMTLMP-RK 1995

Query: 363  RCLDLDRGNCWGVNVVDQSRNAALILTGAMLLGVNVVDQSAEAAARRPPPPPPQ--EKKD 422
                +  G                +   A+   V+  + SA AAARRPPPPP +  EK+D
Sbjct: 1996 IISTVGLG----------------LAAAALSFNVSNPNSSANAAARRPPPPPAEEKEKRD 2055

Query: 423  PNLSGVQAKVLASKKRKEALKEATAKLRAQGKPVDQP 455
            PN+SGV AKVLASKKRKEA+K++ AKLR +GKP+ +P
Sbjct: 2056 PNVSGVLAKVLASKKRKEAMKQSVAKLRDKGKPIQEP 2064

[Close]

BLAST of HG10015088 vs. ExPASy TrEMBL
Match: A0A5A7SW58 (60S ribosomal protein L5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002450 PE=3 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 1.1e-150
Identity = 282/303 (93.07%), Postives = 291/303 (96.04%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELP YGLEVGLTNYAAAYCTGLLLARRVLKMLEMD EYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120

Query: 121 GNVEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFA 180
           GNVEATGED+SVEPADTRRPFRALLD GLIRTTTGNRVFGALKGALDGGL++PHS+KRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GYSKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYK 240
           GY+K+ +QLD EV RKYIFGGHVAAYMRTLMEDEPEKYQSHFS YIKKGIEADD++ LYK
Sbjct: 181 GYTKNSQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADDLEGLYK 240

Query: 241 KVHAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADA--DDDDE 300
           KVHAAIRANP VKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAAD   DDDDE
Sbjct: 241 KVHAAIRANPTVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADGDEDDDDE 300

[Close]

BLAST of HG10015088 vs. ExPASy TrEMBL
Match: A0A6J1GXQ9 (60S ribosomal protein L5 OS=Cucurbita moschata OX=3662 GN=LOC111458161 PE=3 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 1.1e-150
Identity = 278/301 (92.36%), Postives = 293/301 (97.34%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVR SNKD+
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFSNKDV 60

Query: 61  TAQIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELP YGLEVGLTNYAAAYCTGLLLARRVLKMLEMD+EYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYE 120

Query: 121 GNVEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFA 180
           GNVEATGED+SVEPADTRRPFRALLD GL++TTTGNRVFGALKGALDGGL++PHSEKRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSEKRFA 180

Query: 181 GYSKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYK 240
           G+SKD KQLDAEV RKYIFGGHVAAYMRTLMEDEPEKYQSHFS YIKKGIEAD+I+ LYK
Sbjct: 181 GFSKDGKQLDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSQYIKKGIEADNIEGLYK 240

Query: 241 KVHAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADADDDDEDD 300
           KVHAAIRA+P+VKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNS A+AD+DD+DD
Sbjct: 241 KVHAAIRADPVVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSKANADEDDDDD 300

[Close]

BLAST of HG10015088 vs. ExPASy TrEMBL
Match: A0A1S3BDK0 (60S ribosomal protein L5 OS=Cucumis melo OX=3656 GN=LOC103488867 PE=3 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 1.1e-150
Identity = 282/303 (93.07%), Postives = 291/303 (96.04%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELP YGLEVGLTNYAAAYCTGLLLARRVLKMLEMD EYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120

Query: 121 GNVEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFA 180
           GNVEATGED+SVEPADTRRPFRALLD GLIRTTTGNRVFGALKGALDGGL++PHS+KRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GYSKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYK 240
           GY+K+ +QLD EV RKYIFGGHVAAYMRTLMEDEPEKYQSHFS YIKKGIEADD++ LYK
Sbjct: 181 GYTKNSQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADDLEGLYK 240

Query: 241 KVHAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADA--DDDDE 300
           KVHAAIRANP VKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAAD   DDDDE
Sbjct: 241 KVHAAIRANPTVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADGDEDDDDE 300

[Close]

BLAST of HG10015088 vs. TAIR 10
Match: AT3G25520.1 (ribosomal protein L5 )

HSP 1 Score: 474.6 bits (1220), Expect = 9.3e-134
Identity = 241/301 (80.07%), Postives = 269/301 (89.37%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60
           M F K+ K+ AYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVR +NKDI
Sbjct: 1   MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
            AQI+SASIAGD+V ASAY+HELP YGL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYE
Sbjct: 61  VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 121 GNVEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFA 180
           GNVEATGEDFSVEP D+RRPFRALLD GLIRTTTGNRVFGALKGALDGGL++PHS+KRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GYSKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYK 240
           G+ K+ KQLDAE+ R YI+GGHV+ YM+ L EDEPEK Q+HFSAYIKKG+EA+ I+ LYK
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYK 240

Query: 241 KVHAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADADDDDEDD 300
           KVHAAIRA+P  KK+ KP PK HKRYNLKKLTY+ERK +L+ER+ ALN A   DDDDEDD
Sbjct: 241 KVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAG-GDDDDEDD 300

[Close]

BLAST of HG10015088 vs. TAIR 10
Match: AT5G39740.1 (ribosomal protein L5 B )

HSP 1 Score: 472.2 bits (1214), Expect = 4.6e-133
Identity = 239/301 (79.40%), Postives = 268/301 (89.04%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60
           M F K+ K+ AYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVR +NKDI
Sbjct: 1   MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
            AQI+SASIAGD+V ASAY+HELP YGL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYE
Sbjct: 61  VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 121 GNVEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFA 180
           GNVEATGEDFSVEP D+RRPFRALLD GLIRTTTGNRVFGALKGALDGGL++PHS+KRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GYSKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYK 240
           G+ K+ KQLDAE+ R YI+GGHV+ YM+ L EDEPEK Q+HFSAYIKKG+EA+ I+ +YK
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYK 240

Query: 241 KVHAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADADDDDEDD 300
           KVHAAIRA P  KK++K  PK HKRYNLKKLTY+ERK +L+ER+ ALN A   DDDDEDD
Sbjct: 241 KVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAG-GDDDDEDD 300

[Close]

BLAST of HG10015088 vs. TAIR 10
Match: AT5G39740.2 (ribosomal protein L5 B )

HSP 1 Score: 472.2 bits (1214), Expect = 4.6e-133
Identity = 239/301 (79.40%), Postives = 268/301 (89.04%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60
           M F K+ K+ AYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVR +NKDI
Sbjct: 1   MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPSYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
            AQI+SASIAGD+V ASAY+HELP YGL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYE
Sbjct: 61  VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 121 GNVEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLELPHSEKRFA 180
           GNVEATGEDFSVEP D+RRPFRALLD GLIRTTTGNRVFGALKGALDGGL++PHS+KRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GYSKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIEADDIDVLYK 240
           G+ K+ KQLDAE+ R YI+GGHV+ YM+ L EDEPEK Q+HFSAYIKKG+EA+ I+ +YK
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYK 240

Query: 241 KVHAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADADDDDEDD 300
           KVHAAIRA P  KK++K  PK HKRYNLKKLTY+ERK +L+ER+ ALN A   DDDDEDD
Sbjct: 241 KVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAG-GDDDDEDD 300

[Close]

BLAST of HG10015088 vs. TAIR 10
Match: AT3G25520.2 (ribosomal protein L5 )

HSP 1 Score: 293.5 bits (750), Expect = 2.9e-79
Identity = 147/190 (77.37%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 112 MLEMDDEYEGNVEATGEDFSVEPADTRRPFRALLDGGLIRTTTGNRVFGALKGALDGGLE 171
           MLEMDDEYEGNVEATGEDFSVEP D+RRPFRALLD GLIRTTTGNRVFGALKGALDGGL+
Sbjct: 1   MLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLD 60

Query: 172 LPHSEKRFAGYSKD-KQLDAEVQRKYIFGGHVAAYMRTLMEDEPEKYQSHFSAYIKKGIE 231
           +PHS+KRFAG+ K+ KQLDAE+ R YI+GGHV+ YM+ L EDEPEK Q+HFSAYIKKG+E
Sbjct: 61  IPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVE 120

Query: 232 ADDIDVLYKKVHAAIRANPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAA 291
           A+ I+ LYKKVHAAIRA+P  KK+ KP PK HKRYNLKKLTY+ERK +L+ER+ ALN A 
Sbjct: 121 AESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAG 180

Query: 292 DADDDDEDDE 301
             DDDDEDDE
Sbjct: 181 -GDDDDEDDE 189

[Close]

BLAST of HG10015088 vs. TAIR 10
Match: AT1G21500.1 (unknown protein; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-14
Identity = 46/81 (56.79%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 378 SRNAALILTGAMLLGVNVV--DQSAEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKE 437
           +R   L+  G  L   N +   + A AAARRPPPPPP+EKKDP ++GVQAKVLASKKRKE
Sbjct: 40  NRRTILVGLGGALWSWNALAAKEEAMAAARRPPPPPPKEKKDPTVTGVQAKVLASKKRKE 99

Query: 438 ALKEATAKLRAQGKPVDQPPP 457
            +K + AKLR +GKPV +  P
Sbjct: 100 EMKASIAKLREKGKPVVEAKP 120

The following BLAST results are available for this feature:

BLAST of HG10015088 vs. NCBI nr


Match Name	E-value	Identity	Description
TKS11744.1	2.3e-155	68.57	60S ribosomal protein L5-like [Populus alba]	[more]
XP_038877881.1	5.4e-152	94.02	60S ribosomal protein L5 [Benincasa hispida]	[more]
RXI05542.1	1.3e-150	65.86	hypothetical protein DVH24_017584 [Malus domestica]	[more]
XP_023528472.1	1.7e-150	92.36	60S ribosomal protein L5 [Cucurbita pepo subsp. pepo]	[more]
XP_008446013.1	2.3e-150	93.07	PREDICTED: 60S ribosomal protein L5 [Cucumis melo] >KAA0034176.1 60S ribosomal p...	[more]

BLAST of HG10015088 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6UNT2	3.9e-153	92.03	60S ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=RPL5 PE=2 SV=1	[more]
Q8LBI1	1.3e-132	80.07	60S ribosomal protein L5-1 OS=Arabidopsis thaliana OX=3702 GN=RPL5A PE=1 SV=2	[more]
P49227	6.5e-132	79.40	60S ribosomal protein L5-2 OS=Arabidopsis thaliana OX=3702 GN=RPL5B PE=2 SV=3	[more]
A2WXX3	9.3e-131	77.26	60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica OX=39946 GN=RPL5A PE=3 ...	[more]
Q0JGY1	2.7e-130	77.26	60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL5A PE=...	[more]

BLAST of HG10015088 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4U5QLV1	1.1e-155	68.57	60S ribosomal protein L5-like OS=Populus alba OX=43335 GN=D5086_0000070420 PE=3 ...	[more]
A0A498KIZ4	6.5e-151	65.86	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_017584 PE=3 SV=1	[more]
A0A5A7SW58	1.1e-150	93.07	60S ribosomal protein L5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1GXQ9	1.1e-150	92.36	60S ribosomal protein L5 OS=Cucurbita moschata OX=3662 GN=LOC111458161 PE=3 SV=1	[more]
A0A1S3BDK0	1.1e-150	93.07	60S ribosomal protein L5 OS=Cucumis melo OX=3656 GN=LOC103488867 PE=3 SV=1	[more]

BLAST of HG10015088 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25520.1	9.3e-134	80.07	ribosomal protein L5	[more]
AT5G39740.1	4.6e-133	79.40	ribosomal protein L5 B	[more]
AT5G39740.2	4.6e-133	79.40	ribosomal protein L5 B	[more]
AT3G25520.2	2.9e-79	77.37	ribosomal protein L5	[more]
AT1G21500.1	1.1e-14	56.79	unknown protein; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PRINTS	PR00058	RIBOSOMALL5	coord: 84..104 score: 80.95 coord: 205..225 score: 49.4 coord: 164..183 score: 67.5 coord: 20..39 score: 76.25 coord: 144..163 score: 75.0 coord: 43..62 score: 70.0
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PFAM	PF17144	Ribosomal_L5e	coord: 14..175 e-value: 3.5E-78 score: 261.3
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PANTHER	PTHR23410	RIBOSOMAL PROTEIN L5-RELATED	coord: 1..296
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	HAMAP	MF_01337_A	Ribosomal_L18_A	coord: 14..245 score: 21.325357
IPR025607	Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminal	PFAM	PF14204	Ribosomal_L18_c	coord: 190..280 e-value: 2.9E-33 score: 114.7
None	No IPR available	GENE3D	3.30.420.100		coord: 1..290 e-value: 2.8E-140 score: 469.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 401..457
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 428..442
None	No IPR available	PANTHER	PTHR23410:SF30	PROTEIN L5, PUTATIVE-RELATED	coord: 1..296
None	No IPR available	CDD	cd00432	Ribosomal_L18_L5e	coord: 41..170 e-value: 7.51951E-26 score: 99.1515
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 11..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015088.1	HG10015088.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome