HG10015078 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015078
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Unknown protein
Location	Chr02: 23672048 .. 23673243 (-)
RNA-Seq Expression	HG10015078
Synteny	HG10015078

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTCAAAAGTAAGTGTAATTCAGACACATTTTAATTTGCACTAAAACATCAAGCTGTAACCATCATTTTAATATACTAGTATTTTTATCACGTGCAATGTACGTGTATATTTTTTATTAAAAAAATATATGTAATTTTTCTAATAATTTATATAAATAAATTTATTATTTATTTTGATTTAATAATATTATCAAGTTAGTAACATTTTGTATTTGATCCGTTTATTTTGTATGTAACTAATTTAATAATTATTTTTGAAATCTCAAAATTTTAATATATCATTATAATTATTATGAGAGTAAAATGTTAATTATCAAGTTTTATATATCTTAATTATTAGATGTTTTTATTTTAATCCATAAAAGCTTGATTATCAAATAAATTTTTTAACAAGATTTATTTTTAGAAAAACTACCTTCATCATTTAATACATAAACTTTTGTTCAATTTAAAAGGACGAGCATAACTAAATATCAATTTAATCTATAGACTTTATTTAGTCTTATACAACTAATAAAATTAGAATTGAATTATTCTAAAAAAATCAATACAATTTTTTTTTTCACAAATTTTAGAAGAAGTAATCATTTAGAATTTAATTGACCAAAATTATTTGTAGAATAATCATCTATATATATAACTGTGTCTTAAAGTATTTTAGAAAAAAATAATTGAACACAATCTTGAATGTTAATGTTAATTCTATATTAATGTTAATTAAATATAAAATCATAATTATTATAATTAATATCAAGAAATAAATATGTAATTTAATTTTTTGTTCATACCTTTTAATTCGAATTATTGTTAAAAAAATAGAGTTCTGTCATTAGGAAAAAAATTGTAACGTCCAAAATAAATTTAATATAATCTCGAGAAAATTTATAAATCAAAATAGATATAACGAATATTAATTTATCAAGTTCACATTTGATTAACGAATATTAATAAATCAAATATTTTTTTTCCCAAAAAACACTACACATTTTTAATAAAGAGCACAAAGCAGGACTCATATTGAACTTTGTGGTTTTATTTTCTATATCATTATTTATACCCATAAGGAAAGGACAATCTAATAATAAAAAAAATCGAATGGAATCGGTGAACCAAAGCAGACCGGACTGGTTCGATTCGGGCTTAAATCGACCGGATCGGTTCGATTCGAGCTGGAAGAAACCGCACACCTAA

mRNA sequence

ATGAATGTCAAAAAGCACAAAGCAGGACTCATATTGAACTTTGTGGTTTTATTTTCTATATCATTATTTATACCCATAAGGAAAGGACAATCTAATAATAAAAAAAATCGAATGGAATCGGTGAACCAAAGCAGACCGGACTGGTTCGATTCGGGCTTAAATCGACCGGATCGGTTCGATTCGAGCTGGAAGAAACCGCACACCTAA

Coding sequence (CDS)

ATGAATGTCAAAAAGCACAAAGCAGGACTCATATTGAACTTTGTGGTTTTATTTTCTATATCATTATTTATACCCATAAGGAAAGGACAATCTAATAATAAAAAAAATCGAATGGAATCGGTGAACCAAAGCAGACCGGACTGGTTCGATTCGGGCTTAAATCGACCGGATCGGTTCGATTCGAGCTGGAAGAAACCGCACACCTAA

Protein sequence

MNVKKHKAGLILNFVVLFSISLFIPIRKGQSNNKKNRMESVNQSRPDWFDSGLNRPDRFDSSWKKPHT

Homology

The following BLAST results are available for this feature:

BLAST of HG10015078 vs.


Match Name	E-value	Identity	Description

BLAST of HG10015078 vs.


Match Name	E-value	Identity	Description

BLAST of HG10015078 vs.


Match Name	E-value	Identity	Description

BLAST of HG10015078 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015078.1	HG10015078.1	mRNA