HG10014954 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10014954
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	serine/arginine-rich splicing factor RS2Z32-like isoform X2
Location	Chr02: 22221256 .. 22223462 (+)
RNA-Seq Expression	HG10014954
Synteny	HG10014954

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCGCTATGACGATCGTTACGGTGGTACTCGGCTCTATGTTGGGCGCCTGTCTTCACGGACGAGGTCCCGTGATCTGGATGACCTGTTCAGTCGTTATGGAAGGTATGGAGATTCTTGCTGGGTGTACTATTCAACCATGGTCGAAATTGTGTGCTAACATTGATTTGATGGATTCGGAAAGTTCATGTGTGTTTAGTTATGCCGTATGTTCTTTCTATTGTCCTTTCTATTGTCCCGGTTTTTCTATTGCCAACATCCTTGTCAGAGTAAATTTTTAATTGATACTTCTCTCGAGACCTCTTGAGGTATTTGCCAAGCCCATTTTTGGGTGCACGACTGTAAATGTGTATTTTGATATATCCATGAAAGTGTGGAATTGTTGATGGGTCTGTATGGTTTAACTTGAGTGATCTTGTTGAAGGTTTCTTGGCTTATGCCAAACCTGGAGGTCTATGGTGAGAGGGTTCCCTTGGTGGATTTGGCGAGTCTTTCTATTATGTTATTGCCTGTTTTTATGGAAATGCCAAGAATCTCAGAATGGTGTTTAGTTCATCTATGAGGGGCGAGGTGTCAACCCTTTGATACTTGTATCAAATGATGGCCTTACCTGTTTCTGGAACCAATTTGCGCAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTCGTTGTATGTATTTCCCTCCCTACACTTACATTCTTATTCAAGCTATTATTGGAAGAAAAAAATGCTATATGTCAGCATCCTTTTTCTATACTTAATGGTGCATGTTAATTTTTGCAAGCGTGATCTTTTTCTTGGTCTATCTGCTTAAACATCTGATAACAGGAATTTAGTGATCCCCGTGATGCGGATGATGCAAGATATAGTTTAAATGGGAGAGATGTTCATGGAAGTCGAATCATTGTGGAAATAGCTAAAGGGGTATGTTTCATAATCTTTCCTCACAAACCTTTCATAAACTGTAAAATTTCTTTCAGACAGTTGCCTCCTCTATTCCATGCTAGCTATCATTTTTATCCTTTTAAGCGGTTAACTATTTCTCCCGTCTATGGTGGATTCATATCTTTTATGTGACTTTGAATTATTATTTTGGTACTTGAAATTTGGAAGATATCATTCATCATGTTCATGGACAGCTTTACTCTTTTCATAGTCACATTTGTTCAATTTTATAAAGCCTGTGTAGTTTTCCTGGGTTGTGCAGGTAACTTAAAGCTTTTTTATATCTTGTATTTTAATTTTGTGAACTTTTGTTTTTTTGAATGTAATGAAAATTACCAATTTTGATTTAGGTACCCCGTGGTCCTGGTGGATCTCGTGAATATCTTGGTCGAGGCCCTCCAGGAACTGGCCGTTGCTTCAATTGTGGGATTGATGGCCACTGGGCTAGAGATTGCAAGGCTGGAGACTGGAAAAATAAATGTTATCGATGTGGCGAACGTGGACATATAGAGAAGAATTGCCAAAACAGTCCTAAGAAATTGAAGTATCTTATCTCTTCAATTGTTTTTTTCTCTTCCCTTTTAAATTTTCTCCATTGATCATTCTGAAAAATGAAATTGTATGGCACAGGCGTGGAAGTTACTCACGTTCACCAAGCCCTCGCCGTGGTAGAAGCCGCAGTCGTAGTTACAGCAGAGGACGTAGCTACAGGTTTGTTTAAATTGAACCATCTTCATTTAGTTTGGTATTGAAGTCTTCATCTTTCTTCACATTGCCATGAGTTTGTTGATTAAGTATTGAACATAAGGCTGTATAACTTACTGATCATTTGTGTTTTGTGTCCACAGTCGATCTAGATCGCCTGTAAAAAGAGAAAGAAGCCTTGAACGATCAGATAAAAGATCAAGGAGCCCGAGAGGCAGACCAAGCCCAAAGAGGCACAGTTTGTCACCTCCTCCTTCAAAAGCTATGAAACGTAGCCCCACTCCTGATGAGAGGAGTCCCGAAGAAGCAAGACGTAGTCTGTCCCCTGAAAATCGCGACAGTCCTAGAGGTAGAAGCAGAAGCCCAAGGGGAAGGAGCAGGAGTCCAATGGACGAAGGCGAGGACTTCAGCGGTGGTGGAAGTAGAAATTACAGGAGGGAAGAAAATGGCTACAGTCGCAGCCCCAGTCCGTTGCCTAGAGAAGAAAGAAGTCCTGTAAACGACGAAGATAACAACGGTTCTCCAAGGGGTGGCAGCGAGTCTGCATAA

mRNA sequence

ATGCCTCGCTATGACGATCGTTACGGTGGTACTCGGCTCTATGTTGGGCGCCTGTCTTCACGGACGAGGTCCCGTGATCTGGATGACCTGTTCAGTCGTTATGGAAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTCGTTGAATTTAGTGATCCCCGTGATGCGGATGATGCAAGATATAGTTTAAATGGGAGAGATGTTCATGGAAGTCGAATCATTGTGGAAATAGCTAAAGGGGTACCCCGTGGTCCTGGTGGATCTCGTGAATATCTTGGTCGAGGCCCTCCAGGAACTGGCCGTTGCTTCAATTGTGGGATTGATGGCCACTGGGCTAGAGATTGCAAGGCTGGAGACTGGAAAAATAAATGTTATCGATGTGGCGAACGTGGACATATAGAGAAGAATTGCCAAAACAGTCCTAAGAAATTGAATCGATCTAGATCGCCTGTAAAAAGAGAAAGAAGCCTTGAACGATCAGATAAAAGATCAAGGAGCCCGAGAGGCAGACCAAGCCCAAAGAGGCACAGTTTGTCACCTCCTCCTTCAAAAGCTATGAAACGTAGCCCCACTCCTGATGAGAGGAGTCCCGAAGAAGCAAGACGTAGTCTGTCCCCTGAAAATCGCGACAGTCCTAGAGGTAGAAGCAGAAGCCCAAGGGGAAGGAGCAGGAGTCCAATGGACGAAGGCGAGGACTTCAGCGGTGGTGGAAGTAGAAATTACAGGAGGGAAGAAAATGGCTACAGTCGCAGCCCCAGTCCGTTGCCTAGAGAAGAAAGAAGTCCTGTAAACGACGAAGATAACAACGGTTCTCCAAGGGGTGGCAGCGAGTCTGCATAA

Coding sequence (CDS)

ATGCCTCGCTATGACGATCGTTACGGTGGTACTCGGCTCTATGTTGGGCGCCTGTCTTCACGGACGAGGTCCCGTGATCTGGATGACCTGTTCAGTCGTTATGGAAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTCGTTGAATTTAGTGATCCCCGTGATGCGGATGATGCAAGATATAGTTTAAATGGGAGAGATGTTCATGGAAGTCGAATCATTGTGGAAATAGCTAAAGGGGTACCCCGTGGTCCTGGTGGATCTCGTGAATATCTTGGTCGAGGCCCTCCAGGAACTGGCCGTTGCTTCAATTGTGGGATTGATGGCCACTGGGCTAGAGATTGCAAGGCTGGAGACTGGAAAAATAAATGTTATCGATGTGGCGAACGTGGACATATAGAGAAGAATTGCCAAAACAGTCCTAAGAAATTGAATCGATCTAGATCGCCTGTAAAAAGAGAAAGAAGCCTTGAACGATCAGATAAAAGATCAAGGAGCCCGAGAGGCAGACCAAGCCCAAAGAGGCACAGTTTGTCACCTCCTCCTTCAAAAGCTATGAAACGTAGCCCCACTCCTGATGAGAGGAGTCCCGAAGAAGCAAGACGTAGTCTGTCCCCTGAAAATCGCGACAGTCCTAGAGGTAGAAGCAGAAGCCCAAGGGGAAGGAGCAGGAGTCCAATGGACGAAGGCGAGGACTTCAGCGGTGGTGGAAGTAGAAATTACAGGAGGGAAGAAAATGGCTACAGTCGCAGCCCCAGTCCGTTGCCTAGAGAAGAAAGAAGTCCTGTAAACGACGAAGATAACAACGGTTCTCCAAGGGGTGGCAGCGAGTCTGCATAA

Protein sequence

MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLNRSRSPVKRERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEEARRSLSPENRDSPRGRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSESA

Homology

[Close]

BLAST of HG10014954 vs. NCBI nr
Match: XP_038892927.1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Benincasa hispida] >XP_038892928.1 serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Benincasa hispida])

HSP 1 Score: 520.0 bits (1338), Expect = 1.3e-143
Identity = 274/307 (89.25%), Postives = 275/307 (89.58%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKL---------------------------NRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKL                           +RSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 181 RERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEEARRSLSPENRDSP 240
           RERSLERSDKRSRSPRGR SPKRHSLSPPP K MKRSPTPDERSPEEARRSLSP NRDSP
Sbjct: 181 RERSLERSDKRSRSPRGRSSPKRHSLSPPP-KTMKRSPTPDERSPEEARRSLSPGNRDSP 240

Query: 241 RGRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSP 281
           RGRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDED NGSP
Sbjct: 241 RGRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDEDQNGSP 300

[Close]

BLAST of HG10014954 vs. NCBI nr
Match: XP_008445806.1 (PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis melo] >XP_008445807.1 PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis melo])

HSP 1 Score: 511.9 bits (1317), Expect = 3.4e-141
Identity = 274/310 (88.39%), Postives = 277/310 (89.35%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKL---------------------------NRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKL                           +RSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 181 RERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEE-ARRSLSPENRD- 240
           R+RSLERSDKRSRSPRGR SPKRHSLSPPP KAMKRSPTPDERSPEE ARRSLSP NRD 
Sbjct: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPP-KAMKRSPTPDERSPEEDARRSLSPGNRDS 240

Query: 241 -SPRGRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN 281
            SPRGRSRSPRGRSRSPMDEGEDF+GGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN
Sbjct: 241 RSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN 300

[Close]

BLAST of HG10014954 vs. NCBI nr
Match: XP_004143594.1 (serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_004143595.1 serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_031741874.1 serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >KAE8647969.1 hypothetical protein Csa_000224 [Cucumis sativus])

HSP 1 Score: 510.0 bits (1312), Expect = 1.3e-140
Identity = 273/309 (88.35%), Postives = 276/309 (89.32%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKL---------------------------NRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKL                           +RSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 181 RERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEE-ARRSLSPENRD- 240
           R+RSLERSDKRSRSPRGR SPKRHSLSPPP KAMKRSPTPDERSPEE ARRSLSP NRD 
Sbjct: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPP-KAMKRSPTPDERSPEEDARRSLSPGNRDS 240

Query: 241 -SPRGRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN 280
            SPRGRSRSPRGRSRSPMDEGEDF+GGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN
Sbjct: 241 RSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN 300

[Close]

BLAST of HG10014954 vs. NCBI nr
Match: XP_022139066.1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Momordica charantia] >XP_022139067.1 serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Momordica charantia] >XP_022139068.1 serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Momordica charantia])

HSP 1 Score: 497.3 bits (1279), Expect = 8.8e-137
Identity = 269/330 (81.52%), Postives = 274/330 (83.03%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKL-----------------------------NRSRSP 180
           WKNKCYRCGERGHIEKNCQNSPKKL                             +RSRSP
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGGGRSRSRSYSRGRSYSRSRSP 180

Query: 181 VKRERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEEARRSLSPENRD 240
           +KRERSLERS+KRSRSPRGRPSPKRHSLSPPP KAMKRSPTPDERSPEEARRS SP NRD
Sbjct: 181 IKRERSLERSEKRSRSPRGRPSPKRHSLSPPP-KAMKRSPTPDERSPEEARRSPSPGNRD 240

Query: 241 ---------------------SPRGRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYS 281
                                SPRGRSRSPRGRSRSPMDE EDF  GGSRNYRREENGYS
Sbjct: 241 SPRGRSRSPRGRSRSPRGRSRSPRGRSRSPRGRSRSPMDEAEDFD-GGSRNYRREENGYS 300

[Close]

BLAST of HG10014954 vs. NCBI nr
Match: KAA0034024.1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 496.9 bits (1278), Expect = 1.1e-136
Identity = 274/338 (81.07%), Postives = 277/338 (81.95%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG------------------------- 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG                         
Sbjct: 18  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGSSSMRGEVSTLWYLYQMMALPVSGT 77

Query: 61  ---RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 120
              RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY
Sbjct: 78  NLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 137

Query: 121 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKL------- 180
           LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKL       
Sbjct: 138 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 197

Query: 181 --------------------NRSRSPVKRERSLERSDKRSRSPRGRPSPKRHSLSPPPSK 240
                               +RSRSPVKR+RSLERSDKRSRSPRGR SPKRHSLSPPP K
Sbjct: 198 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPP-K 257

Query: 241 AMKRSPTPDERSPEE-ARRSLSPENRD--SPRGRSRSPRGRSRSPMDEGEDFSGGGSRNY 281
           AMKRSPTPDERSPEE ARRSLSP NRD  SPRGRSRSPRGRSRSPMDEGEDF+GGGSRNY
Sbjct: 258 AMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNY 317

[Close]

BLAST of HG10014954 vs. ExPASy Swiss-Prot
Match: Q8VYA5 (Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana OX=3702 GN=RS2Z33 PE=1 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 3.5e-72
Identity = 184/307 (59.93%), Postives = 206/307 (67.10%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEF DPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 120
           R+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG GRCFNCG+DGHWARDC AG
Sbjct: 61  RHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGVDGHWARDCTAG 120

Query: 121 DWKNKCYRCGERGHIEKNCQNSPKKLNRSRSPVKRERSLERSDKRSRSPRGRPSPKRHSL 180
           DWKNKCYRCGERGHIE+NC+NSPKKL RS        S  RS  RSRSPR R SP R SL
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPKKLRRS-------GSYSRSPVRSRSPRRRRSPSR-SL 180

Query: 181 SPPPSKAMKRSPT-PDERSPEEARRSLSPENRDSPRGRSRSPRGRSRSPM--DEGE---- 240
           S   S +  RSP    ERS EE  RS SP+  D     S SPR R RSP+  DEG     
Sbjct: 181 SRSRSYSRSRSPVRRRERSVEE--RSRSPKRMDD----SLSPRARDRSPVLDDEGSPKII 240

Query: 241 DFSGGGSRNYRRE-----------ENGYSRSPSPL-------PREERSPVND--EDNNGS 280
           D S   S   ++E           +NG +   SP+        +E+RSPV+D  E N  S
Sbjct: 241 DGSPPPSPKLQKEVGSDRDGGSPQDNGRNSVVSPVVGAGGDSSKEDRSPVDDDYEPNRTS 289

[Close]

BLAST of HG10014954 vs. ExPASy Swiss-Prot
Match: Q9FYB7 (Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis thaliana OX=3702 GN=RS2Z32 PE=1 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.1e-69
Identity = 169/292 (57.88%), Postives = 193/292 (66.10%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 120
           RY L+GRD  GSRI VE ++G PR   GSR+   RG PPG+GRCFNCG+DGHWARDC AG
Sbjct: 61  RYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAG 120

Query: 121 DWKNKCYRCGERGHIEKNCQNSPKKLNRSRSPVKRERSLERSDKRSRSPRGRPSPKR-HS 180
           DWKNKCYRCGERGHIE+NC+NSP     S    ++  S  RS  +SRSPR R SP R  S
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSP-----SPKKARQGGSYSRSPVKSRSPRRRRSPSRSRS 180

Query: 181 LSPPPSKAMKRSPTPDERSPEEARRSLSPENRD-SPRGRSRSPRGRSRSPMD----EGED 240
            S   S +  RSP   E+S E+  RS     R  SP+GR +S     R  +D     G D
Sbjct: 181 YSRGRSYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRDQS-LSPDRKVIDASPKRGSD 240

Query: 241 FSG-----GGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPR-GGSES 280
           + G     G  RN      G   SP  L  ++RSP++DE     P   GSES
Sbjct: 241 YDGSPKENGNGRNSASPIVGGGESPVGLNGQDRSPIDDEAELSRPSPKGSES 283

[Close]

BLAST of HG10014954 vs. ExPASy Swiss-Prot
Match: Q3T106 (Serine/arginine-rich splicing factor 7 OS=Bos taurus OX=9913 GN=SRSF7 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.2e-17
Identity = 96/278 (34.53%), Postives = 132/278 (47.48%), Query Frame = 0


Query: 1   MPRYDDRYGG-TRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRD---YAFVEFSDPRD 60
           M RY  RYGG T++YVG L +     +L+  FS YG +R V + R+   +AFVEF DPRD
Sbjct: 1   MSRY-GRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 60

Query: 61  ADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDC 120
           A+DA   L+G+ + GSR+ VE++ G+PR     R    R P               AR  
Sbjct: 61  AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP---------------AR-- 120

Query: 121 KAGDWKNKCYRCGERGHIEKNCQNSPKKLNRSRSPVKRERSLERSDKRSRSPRGRPSPKR 180
           +  D  ++CY CGE+GH   +C    ++        +R RS  RS  RSR        +R
Sbjct: 121 RPFDPNDRCYECGEKGHYAYDCHRYSRR--------RRSRSRSRSHSRSRG-------RR 180

Query: 181 HSLSPPPSKAMK-RSPTPDERSPEEARRSLSPENRDSPRGRSRSPRGRSRSPMDEGEDFS 240
           +S S   S+  + RS +P        RRS S   R S  G  +  R RSR         S
Sbjct: 181 YSRSRSRSRGRRSRSASPRRSRSVSLRRSRSASLRRSRSGSIKGSRSRSR---------S 231

Query: 241 GGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSP 274
              SR+  R  +  S+S SP P+  RSP      + SP
Sbjct: 241 RSRSRSLSRPRSSRSKSRSPSPKRSRSPSGSPRRSASP 231

[Close]

BLAST of HG10014954 vs. ExPASy Swiss-Prot
Match: Q16629 (Serine/arginine-rich splicing factor 7 OS=Homo sapiens OX=9606 GN=SRSF7 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.2e-17
Identity = 91/246 (36.99%), Postives = 124/246 (50.41%), Query Frame = 0


Query: 1   MPRYDDRYGG-TRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRD---YAFVEFSDPRD 60
           M RY  RYGG T++YVG L +     +L+  FS YG +R V + R+   +AFVEF DPRD
Sbjct: 1   MSRY-GRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 60

Query: 61  ADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDC 120
           A+DA   L+G+ + GSR+ VE++ G+PR     R    R      RC+ CG  GH+A DC
Sbjct: 61  AEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 120

Query: 121 KAGDWKNKCYRCGERGHIEKNCQNSPKKLNRSRSPVKRERSLERSDKRSRS---PRGRPS 180
                + +      R     + ++  ++ +RSRS  +  RS   S +RSRS    R R +
Sbjct: 121 HRYSRRRR-----SRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSA 180

Query: 181 PKRHSLS---------PPPSKAMKRSPTPDERSPEEARRSLSPENRDSPRGRSRSPRG-- 228
             R S S           PS++  RS     RS    R S S     SP+ RSRSP G  
Sbjct: 181 SLRRSRSGSIKGSRYFQSPSRSRSRS-----RSISRPRSSRSKSRSPSPK-RSRSPSGSP 234

[Close]

BLAST of HG10014954 vs. ExPASy Swiss-Prot
Match: Q8BL97 (Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.3e-13
Identity = 90/270 (33.33%), Postives = 126/270 (46.67%), Query Frame = 0


Query: 11  TRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRD---YAFVEFSDPRDADDARYSLNGR 70
           T++YVG L +     +L+  FS YG +R V + R+   +AFVEF DPRDA+DA   L+G+
Sbjct: 40  TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 99

Query: 71  DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYR 130
            + GSR+ VE++ G+PR     R    R P               AR  +  D  ++CY 
Sbjct: 100 VICGSRVRVELSTGMPR-----RSRFDRPP---------------AR--RPFDPNDRCYE 159

Query: 131 CGERGHIEKNCQNSPKKLNRSRSPVKRERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAM 190
           CGE+GH   +C    ++        +R RS  RS  RSR        +R+S S   S+  
Sbjct: 160 CGEKGHYAYDCHRYSRR--------RRSRSRSRSHSRSRG-------RRYSRSRSRSRGR 219

Query: 191 K-RSPTPDERSPEEARRSLSPENRDSPRGR---SRSPRGRSRSPMDEGEDFSGGGSRNYR 250
           + RS +P        RRS S   R S  G    SR  + RSR         S   SR+  
Sbjct: 220 RSRSASPRRSRSVSLRRSRSASLRRSRSGSIIGSRYFQSRSR---------SRSRSRSIS 263

Query: 251 REENGYSRSPSPLPREERSPVNDEDNNGSP 274
           R  +  S+S SP P+  RSP      + SP
Sbjct: 280 RPRSSRSKSRSPSPKRSRSPSGSPHRSASP 263

[Close]

BLAST of HG10014954 vs. ExPASy TrEMBL
Match: A0A1S3BDJ7 (serine/arginine-rich splicing factor RS2Z32-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488725 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 1.7e-141
Identity = 274/310 (88.39%), Postives = 277/310 (89.35%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKL---------------------------NRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKL                           +RSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 181 RERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEE-ARRSLSPENRD- 240
           R+RSLERSDKRSRSPRGR SPKRHSLSPPP KAMKRSPTPDERSPEE ARRSLSP NRD 
Sbjct: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPP-KAMKRSPTPDERSPEEDARRSLSPGNRDS 240

Query: 241 -SPRGRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN 281
            SPRGRSRSPRGRSRSPMDEGEDF+GGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN
Sbjct: 241 RSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN 300

[Close]

BLAST of HG10014954 vs. ExPASy TrEMBL
Match: A0A0A0KS31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177110 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 6.3e-141
Identity = 273/309 (88.35%), Postives = 276/309 (89.32%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 63  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 122

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 123 RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 182

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKL---------------------------NRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKL                           +RSRSPVK
Sbjct: 183 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 242

Query: 181 RERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEE-ARRSLSPENRD- 240
           R+RSLERSDKRSRSPRGR SPKRHSLSPPP KAMKRSPTPDERSPEE ARRSLSP NRD 
Sbjct: 243 RDRSLERSDKRSRSPRGRSSPKRHSLSPPP-KAMKRSPTPDERSPEEDARRSLSPGNRDS 302

Query: 241 -SPRGRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN 280
            SPRGRSRSPRGRSRSPMDEGEDF+GGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN
Sbjct: 303 RSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN 362

[Close]

BLAST of HG10014954 vs. ExPASy TrEMBL
Match: A0A6J1CET7 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010076 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 4.2e-137
Identity = 269/330 (81.52%), Postives = 274/330 (83.03%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKL-----------------------------NRSRSP 180
           WKNKCYRCGERGHIEKNCQNSPKKL                             +RSRSP
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGGGRSRSRSYSRGRSYSRSRSP 180

Query: 181 VKRERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEEARRSLSPENRD 240
           +KRERSLERS+KRSRSPRGRPSPKRHSLSPPP KAMKRSPTPDERSPEEARRS SP NRD
Sbjct: 181 IKRERSLERSEKRSRSPRGRPSPKRHSLSPPP-KAMKRSPTPDERSPEEARRSPSPGNRD 240

Query: 241 ---------------------SPRGRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYS 281
                                SPRGRSRSPRGRSRSPMDE EDF  GGSRNYRREENGYS
Sbjct: 241 SPRGRSRSPRGRSRSPRGRSRSPRGRSRSPRGRSRSPMDEAEDFD-GGSRNYRREENGYS 300

[Close]

BLAST of HG10014954 vs. ExPASy TrEMBL
Match: A0A1S3BD24 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488725 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 5.5e-137
Identity = 274/338 (81.07%), Postives = 277/338 (81.95%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG------------------------- 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG                         
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGSSSMRGEVSTLWYLYQMMALPVSGT 60

Query: 61  ---RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 120
              RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY
Sbjct: 61  NLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 120

Query: 121 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKL------- 180
           LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKL       
Sbjct: 121 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 180

Query: 181 --------------------NRSRSPVKRERSLERSDKRSRSPRGRPSPKRHSLSPPPSK 240
                               +RSRSPVKR+RSLERSDKRSRSPRGR SPKRHSLSPPP K
Sbjct: 181 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPP-K 240

Query: 241 AMKRSPTPDERSPEE-ARRSLSPENRD--SPRGRSRSPRGRSRSPMDEGEDFSGGGSRNY 281
           AMKRSPTPDERSPEE ARRSLSP NRD  SPRGRSRSPRGRSRSPMDEGEDF+GGGSRNY
Sbjct: 241 AMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNY 300

[Close]

BLAST of HG10014954 vs. ExPASy TrEMBL
Match: A0A5A7SS39 (Serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00080 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 5.5e-137
Identity = 274/338 (81.07%), Postives = 277/338 (81.95%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG------------------------- 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG                         
Sbjct: 18  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGSSSMRGEVSTLWYLYQMMALPVSGT 77

Query: 61  ---RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 120
              RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY
Sbjct: 78  NLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 137

Query: 121 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKL------- 180
           LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKL       
Sbjct: 138 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 197

Query: 181 --------------------NRSRSPVKRERSLERSDKRSRSPRGRPSPKRHSLSPPPSK 240
                               +RSRSPVKR+RSLERSDKRSRSPRGR SPKRHSLSPPP K
Sbjct: 198 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPP-K 257

Query: 241 AMKRSPTPDERSPEE-ARRSLSPENRD--SPRGRSRSPRGRSRSPMDEGEDFSGGGSRNY 281
           AMKRSPTPDERSPEE ARRSLSP NRD  SPRGRSRSPRGRSRSPMDEGEDF+GGGSRNY
Sbjct: 258 AMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNY 317

[Close]

BLAST of HG10014954 vs. TAIR 10
Match: AT2G37340.1 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 273.1 bits (697), Expect = 2.5e-73
Identity = 184/307 (59.93%), Postives = 206/307 (67.10%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEF DPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 120
           R+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG GRCFNCG+DGHWARDC AG
Sbjct: 61  RHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGVDGHWARDCTAG 120

Query: 121 DWKNKCYRCGERGHIEKNCQNSPKKLNRSRSPVKRERSLERSDKRSRSPRGRPSPKRHSL 180
           DWKNKCYRCGERGHIE+NC+NSPKKL RS        S  RS  RSRSPR R SP R SL
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPKKLRRS-------GSYSRSPVRSRSPRRRRSPSR-SL 180

Query: 181 SPPPSKAMKRSPT-PDERSPEEARRSLSPENRDSPRGRSRSPRGRSRSPM--DEGE---- 240
           S   S +  RSP    ERS EE  RS SP+  D     S SPR R RSP+  DEG     
Sbjct: 181 SRSRSYSRSRSPVRRRERSVEE--RSRSPKRMDD----SLSPRARDRSPVLDDEGSPKII 240

Query: 241 DFSGGGSRNYRRE-----------ENGYSRSPSPL-------PREERSPVND--EDNNGS 280
           D S   S   ++E           +NG +   SP+        +E+RSPV+D  E N  S
Sbjct: 241 DGSPPPSPKLQKEVGSDRDGGSPQDNGRNSVVSPVVGAGGDSSKEDRSPVDDDYEPNRTS 289

[Close]

BLAST of HG10014954 vs. TAIR 10
Match: AT3G53500.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 261.9 bits (668), Expect = 5.8e-70
Identity = 169/292 (57.88%), Postives = 193/292 (66.10%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 120
           RY L+GRD  GSRI VE ++G PR   GSR+   RG PPG+GRCFNCG+DGHWARDC AG
Sbjct: 61  RYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAG 120

Query: 121 DWKNKCYRCGERGHIEKNCQNSPKKLNRSRSPVKRERSLERSDKRSRSPRGRPSPKR-HS 180
           DWKNKCYRCGERGHIE+NC+NSP     S    ++  S  RS  +SRSPR R SP R  S
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSP-----SPKKARQGGSYSRSPVKSRSPRRRRSPSRSRS 180

Query: 181 LSPPPSKAMKRSPTPDERSPEEARRSLSPENRD-SPRGRSRSPRGRSRSPMD----EGED 240
            S   S +  RSP   E+S E+  RS     R  SP+GR +S     R  +D     G D
Sbjct: 181 YSRGRSYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRDQS-LSPDRKVIDASPKRGSD 240

Query: 241 FSG-----GGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPR-GGSES 280
           + G     G  RN      G   SP  L  ++RSP++DE     P   GSES
Sbjct: 241 YDGSPKENGNGRNSASPIVGGGESPVGLNGQDRSPIDDEAELSRPSPKGSES 283

[Close]

BLAST of HG10014954 vs. TAIR 10
Match: AT2G37340.3 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 198.4 bits (503), Expect = 7.8e-51
Identity = 147/266 (55.26%), Postives = 167/266 (62.78%), Query Frame = 0


Query: 42  MKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGT 101
           MKRDYAFVEF DPRDADDAR+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG 
Sbjct: 1   MKRDYAFVEFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGA 60

Query: 102 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLNRSRSPVKRERSLER 161
           GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL RS        S  R
Sbjct: 61  GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRS-------GSYSR 120

Query: 162 SDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPT-PDERSPEEARRSLSPENRDSPRGRSRS 221
           S  RSRSPR R SP R SLS   S +  RSP    ERS EE  RS SP+  D     S S
Sbjct: 121 SPVRSRSPRRRRSPSR-SLSRSRSYSRSRSPVRRRERSVEE--RSRSPKRMDD----SLS 180

Query: 222 PRGRSRSPM--DEGE----DFSGGGSRNYRRE-----------ENGYSRSPSPL------ 280
           PR R RSP+  DEG     D S   S   ++E           +NG +   SP+      
Sbjct: 181 PRARDRSPVLDDEGSPKIIDGSPPPSPKLQKEVGSDRDGGSPQDNGRNSVVSPVVGAGGD 240

[Close]

BLAST of HG10014954 vs. TAIR 10
Match: AT3G53500.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 187.6 bits (475), Expect = 1.4e-47
Identity = 132/251 (52.59%), Postives = 154/251 (61.35%), Query Frame = 0


Query: 42  MKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGT 101
           MKRDYAFVEFSDPRDADDARY L+GRD  GSRI VE ++G PR   GSR+   RG PPG+
Sbjct: 1   MKRDYAFVEFSDPRDADDARYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGS 60

Query: 102 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLNRSRSPVKRERSLER 161
           GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSP     S    ++  S  R
Sbjct: 61  GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSP-----SPKKARQGGSYSR 120

Query: 162 SDKRSRSPRGRPSPKR-HSLSPPPSKAMKRSPTPDERSPEEARRSLSPENRD-SPRGRSR 221
           S  +SRSPR R SP R  S S   S +  RSP   E+S E+  RS     R  SP+GR +
Sbjct: 121 SPVKSRSPRRRRSPSRSRSYSRGRSYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRDQ 180

Query: 222 SPRGRSRSPMD----EGEDFSG-----GGSRNYRREENGYSRSPSPLPREERSPVNDEDN 280
           S     R  +D     G D+ G     G  RN      G   SP  L  ++RSP++DE  
Sbjct: 181 S-LSPDRKVIDASPKRGSDYDGSPKENGNGRNSASPIVGGGESPVGLNGQDRSPIDDEAE 240

[Close]

BLAST of HG10014954 vs. TAIR 10
Match: AT2G37340.2 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 182.2 bits (461), Expect = 5.8e-46
Identity = 139/258 (53.88%), Postives = 159/258 (61.63%), Query Frame = 0


Query: 50  EFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGI 109
           EF DPRDADDAR+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG GRCFNCG+
Sbjct: 20  EFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGV 79

Query: 110 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLNRSRSPVKRERSLERSDKRSRSP 169
           DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL RS        S  RS  RSRSP
Sbjct: 80  DGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRS-------GSYSRSPVRSRSP 139

Query: 170 RGRPSPKRHSLSPPPSKAMKRSPT-PDERSPEEARRSLSPENRDSPRGRSRSPRGRSRSP 229
           R R SP R SLS   S +  RSP    ERS EE  RS SP+  D     S SPR R RSP
Sbjct: 140 RRRRSPSR-SLSRSRSYSRSRSPVRRRERSVEE--RSRSPKRMDD----SLSPRARDRSP 199

Query: 230 M--DEGE----DFSGGGSRNYRRE-----------ENGYSRSPSPL-------PREERSP 280
           +  DEG     D S   S   ++E           +NG +   SP+        +E+RSP
Sbjct: 200 VLDDEGSPKIIDGSPPPSPKLQKEVGSDRDGGSPQDNGRNSVVSPVVGAGGDSSKEDRSP 259

The following BLAST results are available for this feature:

BLAST of HG10014954 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892927.1	1.3e-143	89.25	serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Benincasa hispida] ...	[more]
XP_008445806.1	3.4e-141	88.39	PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis ...	[more]
XP_004143594.1	1.3e-140	88.35	serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_004...	[more]
XP_022139066.1	8.8e-137	81.52	serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Momordica charantia...	[more]
KAA0034024.1	1.1e-136	81.07	serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo var. m...	[more]

BLAST of HG10014954 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYA5	3.5e-72	59.93	Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9FYB7	8.1e-69	57.88	Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q3T106	7.2e-17	34.53	Serine/arginine-rich splicing factor 7 OS=Bos taurus OX=9913 GN=SRSF7 PE=2 SV=1	[more]
Q16629	7.2e-17	36.99	Serine/arginine-rich splicing factor 7 OS=Homo sapiens OX=9606 GN=SRSF7 PE=1 SV=...	[more]
Q8BL97	1.3e-13	33.33	Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV...	[more]

BLAST of HG10014954 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BDJ7	1.7e-141	88.39	serine/arginine-rich splicing factor RS2Z32-like isoform X2 OS=Cucumis melo OX=3...	[more]
A0A0A0KS31	6.3e-141	88.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177110 PE=4 SV=1	[more]
A0A6J1CET7	4.2e-137	81.52	serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Momordica charant...	[more]
A0A1S3BD24	5.5e-137	81.07	serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucumis melo OX=3...	[more]
A0A5A7SS39	5.5e-137	81.07	Serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucumis melo var....	[more]

BLAST of HG10014954 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37340.1	2.5e-73	59.93	arginine/serine-rich zinc knuckle-containing protein 33	[more]
AT3G53500.2	5.8e-70	57.88	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT2G37340.3	7.8e-51	55.26	arginine/serine-rich zinc knuckle-containing protein 33	[more]
AT3G53500.1	1.4e-47	52.59	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT2G37340.2	5.8e-46	53.88	arginine/serine-rich zinc knuckle-containing protein 33	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 12..77 e-value: 2.0E-19 score: 80.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 13..74 e-value: 5.6E-15 score: 54.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 11..81 score: 17.216459
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 102..118 e-value: 2.9E-4 score: 30.1 coord: 124..140 e-value: 0.0022 score: 27.3
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 123..139 e-value: 1.6E-4 score: 21.6 coord: 102..117 e-value: 1.9E-6 score: 27.7
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 102..117 score: 10.147202
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 124..140 score: 10.575755
None	No IPR available	GENE3D	4.10.60.10		coord: 122..154 e-value: 4.5E-6 score: 28.2 coord: 94..121 e-value: 1.5E-6 score: 29.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..280
None	No IPR available	PANTHER	PTHR23147:SF154	SERINE/ARGININE-RICH SPLICING FACTOR RS2Z33-LIKE ISOFORM X1	coord: 10..169 coord: 152..264
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 10..169
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 152..264
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 3..87 e-value: 1.3E-22 score: 81.8
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 9..102
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 95..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10014954.1	HG10014954.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding