HG10014789 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10014789
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	PHD finger protein ALFIN-LIKE 2-like
Location	Chr02: 19941956 .. 19943003 (-)
RNA-Seq Expression	HG10014789
Synteny	HG10014789

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAATCTCTTCCAGCCCTCGTTCCGTTGAAGACATCTTCAAGGATTACAACGCTCGACGCACAGGCCTTGTGCGAGCCCTCACTTATGGTGATCTTTGATTTTCGATCTCTCTCTCTTGCTTTTCACCCTAATCTCTTCATGGGTCTTTTTTCTAATGTGTTTCATGAATTGGGTCTTGATTTTGATCTCCCATTTGTGTCTTTTCTTGCAGATGTCGATGAGTTCTACTCGCTTTGTGATCCTGGTGAGCGTTTGGTTCTTTTAATTTTGTTTTCTTTTTCTGTTAAGTTGACTTTGAGAATTCAGGTCGAAGGGTAGCGTTGTTACGACGAGGATTTTGTTTGCTTTTGTAGAAATAGGGTTTTTTTGTTCCGTCATTCTTTTTTGACGAACGTTTGATGGGTATTACTCGGAATTAGTGAGAGAAACTTGTGGTTTTGTGCGCCTTCTGACCTAATTTTGTTGGGGTTGGTTCTTGACGATGAATTTCTTTTTTGTTTTTCGCTTCCAGAGAAGGAGAATTTGTGTTTGTATGGACATCCGAATGAGTCTTGGGAGGTGACTCTGCCTGCCGAGGAAGTTCCATCCGAGCTCCCTGAGCCGGCGCTAGGGATCAATTTTGCTAGAGATGGGATGAAGCGCCGAGACTGGCTTTCGTTGGTGGCTGTGCACAGCGATTGTTGGTTGCTTTCAGTGGCGTTCTATTTTGGTGCTCAACTCAACCGTAATGAGCGGTAAGTTGAATAACTTCGAGAGTATAGGAAAATCTACTGGATCTTGAATTCATGAAGAAGCATGTAGGCTGTTTGGTGTGCCACTTCTGGCCTCAATGATCTCTTGTTTGAAAAATTATCTCTCATATCCTTTTGCTGTGGACAATGTGTATAGTACTCTTGCATTCCAATTAAGTGCACCTTGGCTATGTTATCCTAATTTGTTTGATGACTAAGGTCCGTTTTGCCTGAGTTTGATCTCTTATTCTGTTGTGGTATACTGTCAGCTGGGAAAGTGGAGAAGATCATGTTCTTCTTGTCATTGTGA

mRNA sequence

ATGGCTTCAATCTCTTCCAGCCCTCGTTCCGTTGAAGACATCTTCAAGGATTACAACGCTCGACGCACAGGCCTTGTGCGAGCCCTCACTTATGATGTCGATGAGTTCTACTCGCTTTGTGATCCTGAGAAGGAGAATTTGTGTTTGTATGGACATCCGAATGAGTCTTGGGAGGTGACTCTGCCTGCCGAGGAAGTTCCATCCGAGCTCCCTGAGCCGGCGCTAGGGATCAATTTTGCTAGAGATGGGATGAAGCGCCGAGACTGGCTTTCGTTGGTGGCTGTGCACAGCGATTGTTGGTTGCTTTCAGTGGCGTTCTATTTTGGTGCTCAACTCAACCGTAATGAGCGGTCCGTTTTGCCTGAGTTTGATCTCTTATTCTGTTGTGGTATACTGTCAGCTGGGAAAGTGGAGAAGATCATGTTCTTCTTGTCATTGTGA

Coding sequence (CDS)

ATGGCTTCAATCTCTTCCAGCCCTCGTTCCGTTGAAGACATCTTCAAGGATTACAACGCTCGACGCACAGGCCTTGTGCGAGCCCTCACTTATGATGTCGATGAGTTCTACTCGCTTTGTGATCCTGAGAAGGAGAATTTGTGTTTGTATGGACATCCGAATGAGTCTTGGGAGGTGACTCTGCCTGCCGAGGAAGTTCCATCCGAGCTCCCTGAGCCGGCGCTAGGGATCAATTTTGCTAGAGATGGGATGAAGCGCCGAGACTGGCTTTCGTTGGTGGCTGTGCACAGCGATTGTTGGTTGCTTTCAGTGGCGTTCTATTTTGGTGCTCAACTCAACCGTAATGAGCGGTCCGTTTTGCCTGAGTTTGATCTCTTATTCTGTTGTGGTATACTGTCAGCTGGGAAAGTGGAGAAGATCATGTTCTTCTTGTCATTGTGA

Protein sequence

MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVTLPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVLPEFDLLFCCGILSAGKVEKIMFFLSL

Homology

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BLAST of HG10014789 vs. NCBI nr
Match: XP_008463243.1 (PREDICTED: PHD finger protein ALFIN-LIKE 2-like [Cucumis melo] >KAA0057678.1 PHD finger protein ALFIN-LIKE 2-like [Cucumis melo var. makuwa] >TYK27463.1 PHD finger protein ALFIN-LIKE 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 250.8 bits (639), Expect = 7.5e-63
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60
           MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT
Sbjct: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60

Query: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 120
           LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNER  L
Sbjct: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERKRL 120

[Close]

BLAST of HG10014789 vs. NCBI nr
Match: XP_038893084.1 (PHD finger protein ALFIN-LIKE 2-like [Benincasa hispida])

HSP 1 Score: 250.8 bits (639), Expect = 7.5e-63
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60
           MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT
Sbjct: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60

Query: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 120
           LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNER  L
Sbjct: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERKRL 120

[Close]

BLAST of HG10014789 vs. NCBI nr
Match: XP_011654991.1 (PHD finger protein ALFIN-LIKE 2 [Cucumis sativus] >KAE8648026.1 hypothetical protein Csa_005878 [Cucumis sativus])

HSP 1 Score: 250.8 bits (639), Expect = 7.5e-63
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60
           MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT
Sbjct: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60

Query: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 120
           LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNER  L
Sbjct: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERKRL 120

[Close]

BLAST of HG10014789 vs. NCBI nr
Match: XP_022156923.1 (PHD finger protein ALFIN-LIKE 2-like [Momordica charantia])

HSP 1 Score: 241.1 bits (614), Expect = 5.9e-60
Identity = 113/120 (94.17%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60
           MASIS+SPRSVEDIFKDY+ARR GLVRALTYDVDEFYSLCDPEKENLCLYGH NESWEVT
Sbjct: 1   MASISTSPRSVEDIFKDYSARRAGLVRALTYDVDEFYSLCDPEKENLCLYGHSNESWEVT 60

Query: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 120
           LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGA+LNRNER  L
Sbjct: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGARLNRNERKRL 120

[Close]

BLAST of HG10014789 vs. NCBI nr
Match: XP_022957000.1 (PHD finger protein ALFIN-LIKE 2-like [Cucurbita moschata] >XP_022987222.1 PHD finger protein ALFIN-LIKE 2-like [Cucurbita maxima] >KAG6600924.1 PHD finger protein ALFIN-LIKE 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59
Identity = 113/120 (94.17%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60
           MASISSS R+VEDIFKDYNARRTGLVRALTYDVD FYSLCDPEKENLCLYGHP+ESWEVT
Sbjct: 1   MASISSSLRTVEDIFKDYNARRTGLVRALTYDVDMFYSLCDPEKENLCLYGHPDESWEVT 60

Query: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 120
           LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGA+LNRNER  L
Sbjct: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGARLNRNERKRL 120

[Close]

BLAST of HG10014789 vs. ExPASy Swiss-Prot
Match: Q9SRM4 (PHD finger protein ALFIN-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=AL2 PE=1 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.4e-56
Identity = 99/119 (83.19%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   ASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVTL 61
           A++SS+PR+VE+IFKDY+ARR  L+RALT DVD+FYS CDPEKENLCLYGHPNESWEV L
Sbjct: 4   AAVSSNPRTVEEIFKDYSARRAALLRALTKDVDDFYSQCDPEKENLCLYGHPNESWEVNL 63

Query: 62  PAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 121
           PAEEVP ELPEPALGINFARDGM+R+DWLSLVAVHSDCWLLSV+FYFGA+LNRNER  L
Sbjct: 64  PAEEVPPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSFYFGARLNRNERKRL 122

[Close]

BLAST of HG10014789 vs. ExPASy Swiss-Prot
Match: Q9FFF5 (PHD finger protein ALFIN-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=AL1 PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.3e-53
Identity = 94/120 (78.33%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60
           MA+ SS+PR+VE+IFKD++ RR+G +RAL+ DVD+FYSLCDPE ENLCLYGHPN +WEV 
Sbjct: 1   MAAESSNPRTVEEIFKDFSGRRSGFLRALSVDVDKFYSLCDPEMENLCLYGHPNGTWEVN 60

Query: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 120
           LPAEEVP ELPEPALGINFARDGM+R+DWLSLVAVHSDCWLLSV+ YFGA+LNRNER  L
Sbjct: 61  LPAEEVPPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSSYFGARLNRNERKRL 120

[Close]

BLAST of HG10014789 vs. ExPASy Swiss-Prot
Match: B8B8I3 (PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_25444 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.6e-53
Identity = 96/119 (80.67%), Postives = 103/119 (86.55%), Query Frame = 0


Query: 2   ASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVTL 61
           A +S +PR+VEDIFKD++ RR GLVRALT DVDEFY  CDPEKENLCLYGHPN  WEV L
Sbjct: 5   APVSPAPRTVEDIFKDFSGRRAGLVRALTVDVDEFYGFCDPEKENLCLYGHPNGRWEVAL 64

Query: 62  PAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 121
           PAEEVP ELPEPALGINFARDGM RRDWLSLVAVHSD WLLSVAF+FGA+LN NER  L
Sbjct: 65  PAEEVPPELPEPALGINFARDGMHRRDWLSLVAVHSDSWLLSVAFFFGARLNGNERKRL 123

[Close]

BLAST of HG10014789 vs. ExPASy Swiss-Prot
Match: Q8H383 (PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0233300 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.6e-53
Identity = 96/119 (80.67%), Postives = 103/119 (86.55%), Query Frame = 0


Query: 2   ASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVTL 61
           A +S +PR+VEDIFKD++ RR GLVRALT DVDEFY  CDPEKENLCLYGHPN  WEV L
Sbjct: 5   APVSPAPRTVEDIFKDFSGRRAGLVRALTVDVDEFYGFCDPEKENLCLYGHPNGRWEVAL 64

Query: 62  PAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 121
           PAEEVP ELPEPALGINFARDGM RRDWLSLVAVHSD WLLSVAF+FGA+LN NER  L
Sbjct: 65  PAEEVPPELPEPALGINFARDGMHRRDWLSLVAVHSDSWLLSVAFFFGARLNGNERKRL 123

[Close]

BLAST of HG10014789 vs. ExPASy Swiss-Prot
Match: A2Y0Q2 (PHD finger protein ALFIN-LIKE 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_18576 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.5e-50
Identity = 88/115 (76.52%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 6   SSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVTLPAEE 65
           S+PRSVEDIFKD+ ARRT ++RALT+DV++FY+ CDPEKENLCLYG+ NE+W+V LPAEE
Sbjct: 21  SAPRSVEDIFKDFRARRTAILRALTHDVEDFYAQCDPEKENLCLYGYANEAWQVALPAEE 80

Query: 66  VPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 121
           VP+ELPEPALGINFARDGM RRDWL+LVAVHSD WL+SVAFY+ A+LNRN+R  L
Sbjct: 81  VPTELPEPALGINFARDGMNRRDWLALVAVHSDSWLVSVAFYYAARLNRNDRKRL 135

[Close]

BLAST of HG10014789 vs. ExPASy TrEMBL
Match: A0A5D3DUV1 (PHD finger protein ALFIN-LIKE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00130 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.6e-63
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60
           MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT
Sbjct: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60

Query: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 120
           LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNER  L
Sbjct: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERKRL 120

[Close]

BLAST of HG10014789 vs. ExPASy TrEMBL
Match: A0A1S3CJ59 (PHD finger protein ALFIN-LIKE 2-like OS=Cucumis melo OX=3656 GN=LOC103501445 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.6e-63
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60
           MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT
Sbjct: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60

Query: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 120
           LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNER  L
Sbjct: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERKRL 120

[Close]

BLAST of HG10014789 vs. ExPASy TrEMBL
Match: A0A0A0KP44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G204410 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.7e-63
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60
           MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT
Sbjct: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60

Query: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNER 118
           LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNER
Sbjct: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNER 117

[Close]

BLAST of HG10014789 vs. ExPASy TrEMBL
Match: A0A6J1DRX5 (PHD finger protein ALFIN-LIKE 2-like OS=Momordica charantia OX=3673 GN=LOC111023751 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.9e-60
Identity = 113/120 (94.17%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60
           MASIS+SPRSVEDIFKDY+ARR GLVRALTYDVDEFYSLCDPEKENLCLYGH NESWEVT
Sbjct: 1   MASISTSPRSVEDIFKDYSARRAGLVRALTYDVDEFYSLCDPEKENLCLYGHSNESWEVT 60

Query: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 120
           LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGA+LNRNER  L
Sbjct: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGARLNRNERKRL 120

[Close]

BLAST of HG10014789 vs. ExPASy TrEMBL
Match: A0A6J1J9S6 (PHD finger protein ALFIN-LIKE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111484838 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 8.3e-60
Identity = 113/120 (94.17%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60
           MASISSS R+VEDIFKDYNARRTGLVRALTYDVD FYSLCDPEKENLCLYGHP+ESWEVT
Sbjct: 1   MASISSSLRTVEDIFKDYNARRTGLVRALTYDVDMFYSLCDPEKENLCLYGHPDESWEVT 60

Query: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 120
           LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGA+LNRNER  L
Sbjct: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGARLNRNERKRL 120

[Close]

BLAST of HG10014789 vs. TAIR 10
Match: AT3G11200.1 (alfin-like 2 )

HSP 1 Score: 219.5 bits (558), Expect = 1.7e-57
Identity = 99/119 (83.19%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   ASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVTL 61
           A++SS+PR+VE+IFKDY+ARR  L+RALT DVD+FYS CDPEKENLCLYGHPNESWEV L
Sbjct: 4   AAVSSNPRTVEEIFKDYSARRAALLRALTKDVDDFYSQCDPEKENLCLYGHPNESWEVNL 63

Query: 62  PAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 121
           PAEEVP ELPEPALGINFARDGM+R+DWLSLVAVHSDCWLLSV+FYFGA+LNRNER  L
Sbjct: 64  PAEEVPPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSFYFGARLNRNERKRL 122

[Close]

BLAST of HG10014789 vs. TAIR 10
Match: AT5G05610.1 (alfin-like 1 )

HSP 1 Score: 209.1 bits (531), Expect = 2.3e-54
Identity = 94/120 (78.33%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60
           MA+ SS+PR+VE+IFKD++ RR+G +RAL+ DVD+FYSLCDPE ENLCLYGHPN +WEV 
Sbjct: 1   MAAESSNPRTVEEIFKDFSGRRSGFLRALSVDVDKFYSLCDPEMENLCLYGHPNGTWEVN 60

Query: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 120
           LPAEEVP ELPEPALGINFARDGM+R+DWLSLVAVHSDCWLLSV+ YFGA+LNRNER  L
Sbjct: 61  LPAEEVPPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSSYFGARLNRNERKRL 120

[Close]

BLAST of HG10014789 vs. TAIR 10
Match: AT5G05610.2 (alfin-like 1 )

HSP 1 Score: 209.1 bits (531), Expect = 2.3e-54
Identity = 94/120 (78.33%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVT 60
           MA+ SS+PR+VE+IFKD++ RR+G +RAL+ DVD+FYSLCDPE ENLCLYGHPN +WEV 
Sbjct: 1   MAAESSNPRTVEEIFKDFSGRRSGFLRALSVDVDKFYSLCDPEMENLCLYGHPNGTWEVN 60

Query: 61  LPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVL 120
           LPAEEVP ELPEPALGINFARDGM+R+DWLSLVAVHSDCWLLSV+ YFGA+LNRNER  L
Sbjct: 61  LPAEEVPPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSSYFGARLNRNERKRL 120

[Close]

BLAST of HG10014789 vs. TAIR 10
Match: AT5G26210.1 (alfin-like 4 )

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-46
Identity = 78/105 (74.29%), Postives = 92/105 (87.62%), Query Frame = 0


Query: 7   SPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVTLPAEEV 66
           +PR+VE++F+D+  RR G+++ALT DV EF+ LCDPEKENLCLYGHPNE WEV LPAEEV
Sbjct: 8   NPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEVNLPAEEV 67

Query: 67  PSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQ 112
           P ELPEP LGINFARDGM  +DWLSLVAVHSD WLL+VAF+FGA+
Sbjct: 68  PPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGAR 112

[Close]

BLAST of HG10014789 vs. TAIR 10
Match: AT2G02470.1 (alfin-like 6 )

HSP 1 Score: 180.6 bits (457), Expect = 8.8e-46
Identity = 81/115 (70.43%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 8   PRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVTLPAEEVP 67
           PR+VE++F D+  RR GL++ALT D+ +FY  CDPEKENLCLYG PNE+WEV LP EEVP
Sbjct: 9   PRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEVNLPVEEVP 68

Query: 68  SELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQ--LNRNERSVL 121
            ELPEPALGINFARDGM+ +DW+SLVAVHSD WLLSVAFYFGA+    +NER  L
Sbjct: 69  PELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRL 123

The following BLAST results are available for this feature:

BLAST of HG10014789 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463243.1	7.5e-63	98.33	PREDICTED: PHD finger protein ALFIN-LIKE 2-like [Cucumis melo] >KAA0057678.1 PHD...	[more]
XP_038893084.1	7.5e-63	98.33	PHD finger protein ALFIN-LIKE 2-like [Benincasa hispida]	[more]
XP_011654991.1	7.5e-63	98.33	PHD finger protein ALFIN-LIKE 2 [Cucumis sativus] >KAE8648026.1 hypothetical pro...	[more]
XP_022156923.1	5.9e-60	94.17	PHD finger protein ALFIN-LIKE 2-like [Momordica charantia]	[more]
XP_022957000.1	1.7e-59	94.17	PHD finger protein ALFIN-LIKE 2-like [Cucurbita moschata] >XP_022987222.1 PHD fi...	[more]

BLAST of HG10014789 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRM4	2.4e-56	83.19	PHD finger protein ALFIN-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=AL2 PE=1 SV=1	[more]
Q9FFF5	3.3e-53	78.33	PHD finger protein ALFIN-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=AL1 PE=1 SV=1	[more]
B8B8I3	5.6e-53	80.67	PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_25...	[more]
Q8H383	5.6e-53	80.67	PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07...	[more]
A2Y0Q2	1.5e-50	76.52	PHD finger protein ALFIN-LIKE 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_18...	[more]

BLAST of HG10014789 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DUV1	3.6e-63	98.33	PHD finger protein ALFIN-LIKE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CJ59	3.6e-63	98.33	PHD finger protein ALFIN-LIKE 2-like OS=Cucumis melo OX=3656 GN=LOC103501445 PE=...	[more]
A0A0A0KP44	4.7e-63	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G204410 PE=4 SV=1	[more]
A0A6J1DRX5	2.9e-60	94.17	PHD finger protein ALFIN-LIKE 2-like OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1J9S6	8.3e-60	94.17	PHD finger protein ALFIN-LIKE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111484838...	[more]

BLAST of HG10014789 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11200.1	1.7e-57	83.19	alfin-like 2	[more]
AT5G05610.1	2.3e-54	78.33	alfin-like 1	[more]
AT5G05610.2	2.3e-54	78.33	alfin-like 1	[more]
AT5G26210.1	1.4e-46	74.29	alfin-like 4	[more]
AT2G02470.1	8.8e-46	70.43	alfin-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021998	Alfin, N-terminal	PFAM	PF12165	Alfin	coord: 10..120 e-value: 1.7E-59 score: 199.1
None	No IPR available	PANTHER	PTHR12321:SF122	PHD FINGER PROTEIN ALFIN-LIKE 2	coord: 1..120
IPR045104	Alfin	PANTHER	PTHR12321	CPG BINDING PROTEIN	coord: 1..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10014789.1	HG10014789.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0042393	histone binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003712	transcription coregulator activity