HG10014758 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10014758
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRNA-dependent RNA polymerase
LocationChr02: 19375269 .. 19381684 (-)
RNA-Seq ExpressionHG10014758
SyntenyHG10014758
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAAACAATTCAGCTTTTTGGATTCCCTCGTAGTGTATCGCAAGAATCAGTTAAGACGTTTGTAGAGAGATTTACAGGCGTAGGAACTATTGATGCCATAAATACAAAACGTTCGAAGGGAAGAGGAAGACGACTGTATGCTATCATCCAGTTTACTGACGAAGAAGGTGCCAAGTCAATTATATCTAAGGCTACAGAAGGCCTTTTCTATGGTACTTCTTATCTGAAAGCAACGGAGTGGAATCATGATATTCTACCAGATCCACTAGTCTTTAAATACAACTTCAAAGGTCTAAAACTCAATCTTGGCTGTCAGATATCAAAGGAGAGTTTTTCCGTGTTGTGGACAGAGTCAAATGTTTCTGTAGATTTCAGGTTTGAGCGACGTAAACTTTATTTCTTCATATCCTATCCTCATGTTGACTACATGCTCGTACTGCACTACGAGAACATTTGGCAGGTTGAGCTACACAAGCCACAAGGCCAATCTGTAGATTATCTTCTGATTCAGGTTCATCCATTAACTTTGAACAATGTTACGTCATTAGTGTACTGTTGTCTTTTCTCTGTATCATTGGGAAATATCATGGATTCATCCAAGCATATTTGACCAAAAATTTTCACTTAGCTAATGCCTGTATTATTCTCTAATTAAGGGGATTCAATGATTGACTCATATACATGCTCATAGGCCTGATTTCCGTCACGAAACAGTGGGTGGACTTGAGGATTACTGGAAATTGGAATTTAGTATACCACCAAATTCATTATTTATACCTCAGTAGCTGAGAGAATATAAATGTAGACTGAACACTTTATGGGAAAAAAGAATTAAATGATTTTATTGATACCTTCAATGCAAAAAAGAAAAGACAAATGGTCAAGGTTTTTCTCAAAATATGGAATATGCGATAACAGAAGTTGGCTGTAGATAAAATCTAGTGCTTCCAATGAGTTATGAAGTCTGGAGTTAGTATGTTGAAGTTAGGAAGTTTGTGTTTCAAGTATAAAGTTGTTGTAAGATGAAGTTCTGCGATAACTGTGCAAAATAAAGAAAGAGCAGAAGATGAAGTTCATCGATAAATGTGCAAACTTCATTACTATTTTGAAGTTGAGTTGTTTAACACTAACTTATAAAGTTGGTGGGTCAAATACCCCCTAAATATATACAAAATTGAGTTGGCCAATTTCTATATTTCTGTACTTCAGGATATGATTATGAGGACAGGTAATCCATGCAAGTGAATATATGTTTCATAAAAAAAAATTATGTTGTCTTCATTTTGATGTTGAAACAAGCAAATCAAAGTTTTATAGCAAAGAATTTGAGAATAGCTTAGATGATTTGCCCATGTACATTTTATGTTGTATATAATTCTAACTATGACATGCTTGTATTATTAGTTATTTGGTGCTCCACGGATTTATGAGAGAGATGCAATATCTTCTGGACACATTACTGAAGACCCTTTCTTAAACTTTTCCATGGAAATTGACACCCAATGGTTTCGAGCAACTGATTTCACTCCATCATGCTGTATTGGGCAATCTGCAGCTTTATGCTTGGAGATTCCTTACGGTCGCCAGCTCCCTAATTTTCATGATAAATTTGCTTACTTTAAAGAAATCAAAGGTAAATTTACATTGGTCAGTGGTTCCACTTATTCCTCCAATGTAAACTTGGTACCTGTAGTTAGACCTCCTCTAACCATCAACTTGCCATATGCAATTTTGTTTAAGATAAATTTGTTGGTACAACAAGGGTGTCTTCCAGGCCCAGCTCTTGATATTAGTTTCTATCAGATGGTAGATCCTCAGATGTACAATATTGCCTTCATAGATCATGCTTTAAAGAAACTTCTTCACTTGAAAGAGTGTTGCTATAACCCTTCAAAATGGTTAGATGAGGAGTACAGAAAGTACTTCAAATTAAAGAATCCCCCTCAGCCACCTATTTTATCCTTAAATGAAGGGTTAGTCTATGTACACAGGGTTCAAGTGACACCTTGTAAAGTATACTTTTGTGGTCCAGAGGTTAATGTTTCAAATCGCGTATTACGCCGTTACCCTGACTACCTCAACAACTTTTTGCGTGTATCATTTGTCGATGAGGAATTGGATAAAATGTATTCAACTGAGTTGTCTCCACGAGCATCCTCTTCTTTGGAGGATGGAAAGACGAAAATCTTTAAACGGATCCTTTCAGTTCTAAGAGATGGCATTACCATTGGTGATAAGAAGTTCGAGTTTCTAGCTTATTCATCTAGTCAATTACGGGAAAATGCTGCATGGATGTTTGCTCCAAGAGATGGACTTACTGCAGCGAGAATAAGGAGATGGATGGGAAATTTTCATGGTATACGAAATGTAGCCAAGTATGCTGCCAGACTAGGCCAATCCTTTGGTTCATCCACAGAAACTTCAAGTGTCAGTAGACGTGAAGTTAACCTTATTCCCGATATCGAAGTTGAATCAGTTGGGGGTGTCAATTATGTCTTCTCTGATGGGATTGGGAAAATATCAGATAGTTTTGCTAGAAAAGTGGCTCAAAAATGTGGGATCAGGCATACACCATCTGCTTTCCAGATTCGTTATGCTGGTTTCAAAGGTGTTATTTCTGTTGATCCTACCTCATCAGTGAAATTATCGCTCAGGAACAGCATGCTCAAGTATGAATCGACAGACACGAAGCTCGATGTTTTATCATGGAGTAAATATCATCCTTGTTTTCTAAATCGTCAGTTGATTACTCTTTTGTCTACACTTGGAGTTGAGGATCATGTGTTTGAGAGTAAACAAAAGGAATTGATTGATGAATTGGACACCATTTTTAGTGATCCATTGAAGGCTCAGCAAGCCCTTGAGCTAATGTCTCCAGGAGAGAATACCAAGATTCTTAAGGAAATGATGTTGTGTGGTTACAAACCTGATTCTGAGCCTTTCTTATGGATGATGTTGCACACATTCAGAGAATCAAGGTTGTTGGAATTACGGAGGAAATCAAGGATCTTCATTCCAAATGGAAGAGCAATGATGGGATGTCTCGACGAAACAAGAAACTTGGAATATGGAGAGGTATTTGTGCAGTGTTCTGCACACCTGCAGCTGCACAATGATAACATAATCTTTAAGAGAAGCAAATCGAACCCGCGTTTCATTGTAACCGGAACAGTAGTAGTGGGGAAAAACCCCTGCTTGCACCCAGGTGATGTGCGTGTTTTAACAGCCGTGGATGTACCATCTCTGCATCACATGGTAGATTGTGTGGTTTTTCCACAAAAAGGATCAAGGTAAATGATCTAGTTTAACATAAAAAATTACATCTCCAGTTCAAGGTCAATGAAATATATTTCTTCTTTTCAGCATTTGATATATGTTTATACTTGACTTCATGAATTCTTGACCGTGTGGCTGAGCACCTCTAATGTCATATCTGCTAGTACTTTTGCTGATCTAAGAAACTTTTTCTTGACATGCCTTGAATCTGTTTAAGAGGGTGCCATATATAAATTCTCTAACACTTACTACTTGCATTTATTTTCTGTATTTTGTACTCTGTTCTCCTCAAGTTAATAAATTAGTTCTCTTGTCATATGTAGTCAACACACCTTCAGTGAACTACTTAAAACTGTTTTATTTTCTTCTTTGCCTAACGATTGCTTTTTTCATAACACTTATCTTGTTTGATTCTTGCTTGTCGATTGTTTCTGTCATAACACTTTTCTTTCTATGTAAGACCTCATCCAAATGAGTGCTCTGGAAGCGATTTAGATGGCGATATATACTTTGTGTGCTGGGACCCTGACTTGATTCCACCTAAACAAGTTGAACCAATGGATTATACCCCTGTACCTAGCAAATTACTAGATCATGACATCACAATGGAGGTATGTTTTACAAGTGAACTTTGAACTGTTGTTGTCAACAAGTATTTTGGAGGAAAAAGTTAATAGAGTGTAAATGTTCTGGATTATACCCCTGTACCTAGCAAATTACTAGATCATGACATCACAATGGAGGTATGTTTTACAAGTGAACTTTGAACTGTTGTTGTCAACAAGTATTTTGGAGGAAAAAGTTAATAGAGTGTAAATGTTCTGGTGCAGGAAGTTCAGGAGTATTTTGCAAATTATATGGTGAATGACAGTTTAGGAATCATTGCCAATGCTCATACAGCATTTGCAGATAAGGAGGCAGAGAAAGCAATGAGCAAACCTTGTATAGAGCTTGCAAAACTATTCTCAATTGCGGTCGACTTTCCGAAAACTGGTGTCCCTGCTTTAATACCTGCTAATCTAAGAGTACAAGAATATCCTGATTTCATGGATAAAGCTGACAAAGTGACATACAAGTCAGATAATGTACTGGGGAAACTATTCAGAATGTTGGATAACATTGGTCCAAACATTAAGAATATCAGGTCCTTCACCTATACTCCAGAGGTGGCTCGGCAAGCTTATGACCCTGACATGGAAGTTGAAGGTTTCGAGGAGTACCTCGATGATGCGCTTTATCACAAGAACAATTATGACATGAGGTTGGGAAATTTGATGCACTATTATAAGATCAAAACTGAGGCCGAATTGATCAATGGCGGTAGTTTGACCTCATCACTATCTTTTACCATGAAAAATGAAGCGGAATCAATCGCCATGGCTGTTAAGTCTCTGCGAAAGGAGGCGAGGGGCTGGTTCAATGAGAAAGCAGACTTACATTATGGACATGATACTAATGTGTATGCAAGAGCTTCAGCATGGTATTTTGTTACATATCATCACACTTACTGGGGCTGGTCCGATGGCAGAAAGAATCATGGCCATTTTCTTAGCTTTCCATGGTGTGTTTATGATAAACTCATCCGTATCAAGAAGCGCAAAATTAATCCTAGAGCTCGCTATCAATAAAACGTTTAAAAAAAGTACACAAGGGGTGCCATCCTGTATTATGAGTTTTGAAGTTTGAGTACAAATCTAGAAATTTAGCTACCTTTTCTTTTTGTCCATCTTTCAACAATTTTAAGACTCCTTCAGAAGCTCTATATATATGAATTGGAGAAATCTATTCCTTTGGTTTCTCCAAAGAATGTACAGTGACACATGAGTTGTGAACAACAATCAACCTTTTGTATAAATAGTGACACAGATCTGGTTATTACTTACTAATCACTTCTAGTCATCTACACTATTTCTGAATCTTTTATCTAATATTATACTTCATTAATATTTTTAGAAACACAAATGGTATTCATCCAAACAACATGAACAAATAAAGTTAAATGGACCTCATTTAAATACACTTTGATACCATATTAAAAAATATGATGTTTCATTCCAAAATCAATTGGCAACGAGAAAAGTGGCTCATCTATCTTATAAACATTGTGAGGTTCCTTGTGCTCAACACATTAGACTATAAATTGCTTTTCACTCAATTTGGTCGTTCTAAACTGAAAACTCTCCTTAAAAGCTAAGTTGTATACAACTTCTTTAGATCATCATTGTTGACAAACAAAACGTCCTCTGTATATAAATGGTGTATAAAAATAAGATGTAATTCATTTGAAAGGGATAAATTCTAAGTACACTTTTTATTTTCAGAACAAAAAGGAAACCACCCAACTTTTTGAAAGTTGAAACATGGGGTTCACAATATTACCACAAGAGGAAAAAAACAGATTGCTATGGTCCACAACAACTCACCCAAATAACAACTAAAACCAACTAAATTGATAGCAATCAAGTGCCATCATGGGTTGGAAATGACTTTGGCTTTTGGCCCATAATAAAAGAAAAAGTAGTTTTTAACCGTTTTATTACCGTTTATTTAAATTAATTCTTCAACTAATTCTAAAATGATTTTTTTATTTAGTTCTTCAATTATTTTTTCCTTAAAAGTGTTCTTAGTTTTTGGGGAAAAAAATACATATTTCTTCTTCCTTTGGTTTTTCCCTCTAGATCTACTGTTTTCTAAACACTTTTCATCCGTTCCAACCCGTTCTCCGACAAGTGCACGTCCACGTCAGGTATCAAGAGTTGTGTTAACTTTGGGGGAGCAACTGGCTTTGGCGATTTAGCACCAAAGTCGCGTCAATCTTGCTTTCAAGGCAGTGAGTTCATCCACGGCGCAACAATAATTGTCATTTGGTACTTACAATTTGAAAGCAAGATTCTTGGAGTTTCACTGATTCTTCCTTCTGAATGTGGATCAAAATGCAGTTGTCCGAATGTTTTGAGTGCCCAGTCCAAGTCCCGAAGCTTCCAACTTTCCTATCAATCGGAAGGTGCTATGGAGGGATCCTTCTGTTTGGAGTCTAGAGAGCTATTCATAAGAATTTTGAAAATTTTCAAGTGGGGATGTGATGCAGAAAAGGCGATTGAAGTGATGAAGCTCAAAGTTGATCACAGGGATTGA

mRNA sequence

ATGGGTAAAACAATTCAGCTTTTTGGATTCCCTCGTAGTGTATCGCAAGAATCAGTTAAGACGTTTGTAGAGAGATTTACAGGCGTAGGAACTATTGATGCCATAAATACAAAACGTTCGAAGGGAAGAGGAAGACGACTGTATGCTATCATCCAGTTTACTGACGAAGAAGGTGCCAAGTCAATTATATCTAAGGCTACAGAAGGCCTTTTCTATGGTACTTCTTATCTGAAAGCAACGGAGTGGAATCATGATATTCTACCAGATCCACTAGTCTTTAAATACAACTTCAAAGGTCTAAAACTCAATCTTGGCTGTCAGATATCAAAGGAGAGTTTTTCCGTGTTGTGGACAGAGTCAAATGTTTCTGTAGATTTCAGGTTTGAGCGACGTAAACTTTATTTCTTCATATCCTATCCTCATGTTGACTACATGCTCGTACTGCACTACGAGAACATTTGGCAGGTTGAGCTACACAAGCCACAAGGCCAATCTGTAGATTATCTTCTGATTCAGTTATTTGGTGCTCCACGGATTTATGAGAGAGATGCAATATCTTCTGGACACATTACTGAAGACCCTTTCTTAAACTTTTCCATGGAAATTGACACCCAATGGTTTCGAGCAACTGATTTCACTCCATCATGCTGTATTGGGCAATCTGCAGCTTTATGCTTGGAGATTCCTTACGGTCGCCAGCTCCCTAATTTTCATGATAAATTTGCTTACTTTAAAGAAATCAAAGGTAAATTTACATTGGTCAGTGGTTCCACTTATTCCTCCAATGTAAACTTGGTACCTGTAGTTAGACCTCCTCTAACCATCAACTTGCCATATGCAATTTTGTTTAAGATAAATTTGTTGGTACAACAAGGGTGTCTTCCAGGCCCAGCTCTTGATATTAGTTTCTATCAGATGGTAGATCCTCAGATGTACAATATTGCCTTCATAGATCATGCTTTAAAGAAACTTCTTCACTTGAAAGAGTGTTGCTATAACCCTTCAAAATGGTTAGATGAGGAGTACAGAAAGTACTTCAAATTAAAGAATCCCCCTCAGCCACCTATTTTATCCTTAAATGAAGGGTTAGTCTATGTACACAGGGTTCAAGTGACACCTTGTAAAGTATACTTTTGTGGTCCAGAGGTTAATGTTTCAAATCGCGTATTACGCCGTTACCCTGACTACCTCAACAACTTTTTGCGTGTATCATTTGTCGATGAGGAATTGGATAAAATGTATTCAACTGAGTTGTCTCCACGAGCATCCTCTTCTTTGGAGGATGGAAAGACGAAAATCTTTAAACGGATCCTTTCAGTTCTAAGAGATGGCATTACCATTGGTGATAAGAAGTTCGAGTTTCTAGCTTATTCATCTAGTCAATTACGGGAAAATGCTGCATGGATGTTTGCTCCAAGAGATGGACTTACTGCAGCGAGAATAAGGAGATGGATGGGAAATTTTCATGGTATACGAAATGTAGCCAAGTATGCTGCCAGACTAGGCCAATCCTTTGGTTCATCCACAGAAACTTCAAGTGTCAGTAGACGTGAAGTTAACCTTATTCCCGATATCGAAGTTGAATCAGTTGGGGGTGTCAATTATGTCTTCTCTGATGGGATTGGGAAAATATCAGATAGTTTTGCTAGAAAAGTGGCTCAAAAATGTGGGATCAGGCATACACCATCTGCTTTCCAGATTCGTTATGCTGGTTTCAAAGGTGTTATTTCTGTTGATCCTACCTCATCAGTGAAATTATCGCTCAGGAACAGCATGCTCAAGTATGAATCGACAGACACGAAGCTCGATGTTTTATCATGGAGTAAATATCATCCTTGTTTTCTAAATCGTCAGTTGATTACTCTTTTGTCTACACTTGGAGTTGAGGATCATGTGTTTGAGAGTAAACAAAAGGAATTGATTGATGAATTGGACACCATTTTTAGTGATCCATTGAAGGCTCAGCAAGCCCTTGAGCTAATGTCTCCAGGAGAGAATACCAAGATTCTTAAGGAAATGATGTTGTGTGGTTACAAACCTGATTCTGAGCCTTTCTTATGGATGATGTTGCACACATTCAGAGAATCAAGGTTGTTGGAATTACGGAGGAAATCAAGGATCTTCATTCCAAATGGAAGAGCAATGATGGGATGTCTCGACGAAACAAGAAACTTGGAATATGGAGAGGTATTTGTGCAGTGTTCTGCACACCTGCAGCTGCACAATGATAACATAATCTTTAAGAGAAGCAAATCGAACCCGCGTTTCATTGTAACCGGAACAGTAGTAGTGGGGAAAAACCCCTGCTTGCACCCAGGTGATGTGCGTGTTTTAACAGCCGTGGATGTACCATCTCTGCATCACATGGTAGATTGTGTGGTTTTTCCACAAAAAGGATCAAGACCTCATCCAAATGAGTGCTCTGGAAGCGATTTAGATGGCGATATATACTTTGTGTGCTGGGACCCTGACTTGATTCCACCTAAACAAGTTGAACCAATGGATTATACCCCTGTACCTAGCAAATTACTAGATCATGACATCACAATGGAGGAAGTTCAGGAGTATTTTGCAAATTATATGGTGAATGACAGTTTAGGAATCATTGCCAATGCTCATACAGCATTTGCAGATAAGGAGGCAGAGAAAGCAATGAGCAAACCTTGTATAGAGCTTGCAAAACTATTCTCAATTGCGGTCGACTTTCCGAAAACTGGTGTCCCTGCTTTAATACCTGCTAATCTAAGAGTACAAGAATATCCTGATTTCATGGATAAAGCTGACAAAGTGACATACAAGTCAGATAATGTACTGGGGAAACTATTCAGAATGTTGGATAACATTGGTCCAAACATTAAGAATATCAGGTCCTTCACCTATACTCCAGAGGTGGCTCGGCAAGCTTATGACCCTGACATGGAAGTTGAAGGTTTCGAGGAGTACCTCGATGATGCGCTTTATCACAAGAACAATTATGACATGAGGTTGGGAAATTTGATGCACTATTATAAGATCAAAACTGAGGCCGAATTGATCAATGGCGGTAGTTTGACCTCATCACTATCTTTTACCATGAAAAATGAAGCGGAATCAATCGCCATGGCTGTTAAGTCTCTGCGAAAGGAGGCGAGGGGCTGGTTCAATGAGAAAGCAGACTTACATTATGGACATGATACTAATGTGTATGCAAGAGCTTCAGCATGGTATTTTGTTACATATCATCACACTTACTGGGGCTGGTCCGATGGCAGAAAGAATCATGGCCATTTTCTTAGCTTTCCATGTTGTCCGAATGTTTTGAGTGCCCAGTCCAAGTCCCGAAGCTTCCAACTTTCCTATCAATCGGAAGGTGCTATGGAGGGATCCTTCTGTTTGGAGTCTAGAGAGCTATTCATAAGAATTTTGAAAATTTTCAAGTGGGGATGTGATGCAGAAAAGGCGATTGAAGTGATGAAGCTCAAAGTTGATCACAGGGATTGA

Coding sequence (CDS)

ATGGGTAAAACAATTCAGCTTTTTGGATTCCCTCGTAGTGTATCGCAAGAATCAGTTAAGACGTTTGTAGAGAGATTTACAGGCGTAGGAACTATTGATGCCATAAATACAAAACGTTCGAAGGGAAGAGGAAGACGACTGTATGCTATCATCCAGTTTACTGACGAAGAAGGTGCCAAGTCAATTATATCTAAGGCTACAGAAGGCCTTTTCTATGGTACTTCTTATCTGAAAGCAACGGAGTGGAATCATGATATTCTACCAGATCCACTAGTCTTTAAATACAACTTCAAAGGTCTAAAACTCAATCTTGGCTGTCAGATATCAAAGGAGAGTTTTTCCGTGTTGTGGACAGAGTCAAATGTTTCTGTAGATTTCAGGTTTGAGCGACGTAAACTTTATTTCTTCATATCCTATCCTCATGTTGACTACATGCTCGTACTGCACTACGAGAACATTTGGCAGGTTGAGCTACACAAGCCACAAGGCCAATCTGTAGATTATCTTCTGATTCAGTTATTTGGTGCTCCACGGATTTATGAGAGAGATGCAATATCTTCTGGACACATTACTGAAGACCCTTTCTTAAACTTTTCCATGGAAATTGACACCCAATGGTTTCGAGCAACTGATTTCACTCCATCATGCTGTATTGGGCAATCTGCAGCTTTATGCTTGGAGATTCCTTACGGTCGCCAGCTCCCTAATTTTCATGATAAATTTGCTTACTTTAAAGAAATCAAAGGTAAATTTACATTGGTCAGTGGTTCCACTTATTCCTCCAATGTAAACTTGGTACCTGTAGTTAGACCTCCTCTAACCATCAACTTGCCATATGCAATTTTGTTTAAGATAAATTTGTTGGTACAACAAGGGTGTCTTCCAGGCCCAGCTCTTGATATTAGTTTCTATCAGATGGTAGATCCTCAGATGTACAATATTGCCTTCATAGATCATGCTTTAAAGAAACTTCTTCACTTGAAAGAGTGTTGCTATAACCCTTCAAAATGGTTAGATGAGGAGTACAGAAAGTACTTCAAATTAAAGAATCCCCCTCAGCCACCTATTTTATCCTTAAATGAAGGGTTAGTCTATGTACACAGGGTTCAAGTGACACCTTGTAAAGTATACTTTTGTGGTCCAGAGGTTAATGTTTCAAATCGCGTATTACGCCGTTACCCTGACTACCTCAACAACTTTTTGCGTGTATCATTTGTCGATGAGGAATTGGATAAAATGTATTCAACTGAGTTGTCTCCACGAGCATCCTCTTCTTTGGAGGATGGAAAGACGAAAATCTTTAAACGGATCCTTTCAGTTCTAAGAGATGGCATTACCATTGGTGATAAGAAGTTCGAGTTTCTAGCTTATTCATCTAGTCAATTACGGGAAAATGCTGCATGGATGTTTGCTCCAAGAGATGGACTTACTGCAGCGAGAATAAGGAGATGGATGGGAAATTTTCATGGTATACGAAATGTAGCCAAGTATGCTGCCAGACTAGGCCAATCCTTTGGTTCATCCACAGAAACTTCAAGTGTCAGTAGACGTGAAGTTAACCTTATTCCCGATATCGAAGTTGAATCAGTTGGGGGTGTCAATTATGTCTTCTCTGATGGGATTGGGAAAATATCAGATAGTTTTGCTAGAAAAGTGGCTCAAAAATGTGGGATCAGGCATACACCATCTGCTTTCCAGATTCGTTATGCTGGTTTCAAAGGTGTTATTTCTGTTGATCCTACCTCATCAGTGAAATTATCGCTCAGGAACAGCATGCTCAAGTATGAATCGACAGACACGAAGCTCGATGTTTTATCATGGAGTAAATATCATCCTTGTTTTCTAAATCGTCAGTTGATTACTCTTTTGTCTACACTTGGAGTTGAGGATCATGTGTTTGAGAGTAAACAAAAGGAATTGATTGATGAATTGGACACCATTTTTAGTGATCCATTGAAGGCTCAGCAAGCCCTTGAGCTAATGTCTCCAGGAGAGAATACCAAGATTCTTAAGGAAATGATGTTGTGTGGTTACAAACCTGATTCTGAGCCTTTCTTATGGATGATGTTGCACACATTCAGAGAATCAAGGTTGTTGGAATTACGGAGGAAATCAAGGATCTTCATTCCAAATGGAAGAGCAATGATGGGATGTCTCGACGAAACAAGAAACTTGGAATATGGAGAGGTATTTGTGCAGTGTTCTGCACACCTGCAGCTGCACAATGATAACATAATCTTTAAGAGAAGCAAATCGAACCCGCGTTTCATTGTAACCGGAACAGTAGTAGTGGGGAAAAACCCCTGCTTGCACCCAGGTGATGTGCGTGTTTTAACAGCCGTGGATGTACCATCTCTGCATCACATGGTAGATTGTGTGGTTTTTCCACAAAAAGGATCAAGACCTCATCCAAATGAGTGCTCTGGAAGCGATTTAGATGGCGATATATACTTTGTGTGCTGGGACCCTGACTTGATTCCACCTAAACAAGTTGAACCAATGGATTATACCCCTGTACCTAGCAAATTACTAGATCATGACATCACAATGGAGGAAGTTCAGGAGTATTTTGCAAATTATATGGTGAATGACAGTTTAGGAATCATTGCCAATGCTCATACAGCATTTGCAGATAAGGAGGCAGAGAAAGCAATGAGCAAACCTTGTATAGAGCTTGCAAAACTATTCTCAATTGCGGTCGACTTTCCGAAAACTGGTGTCCCTGCTTTAATACCTGCTAATCTAAGAGTACAAGAATATCCTGATTTCATGGATAAAGCTGACAAAGTGACATACAAGTCAGATAATGTACTGGGGAAACTATTCAGAATGTTGGATAACATTGGTCCAAACATTAAGAATATCAGGTCCTTCACCTATACTCCAGAGGTGGCTCGGCAAGCTTATGACCCTGACATGGAAGTTGAAGGTTTCGAGGAGTACCTCGATGATGCGCTTTATCACAAGAACAATTATGACATGAGGTTGGGAAATTTGATGCACTATTATAAGATCAAAACTGAGGCCGAATTGATCAATGGCGGTAGTTTGACCTCATCACTATCTTTTACCATGAAAAATGAAGCGGAATCAATCGCCATGGCTGTTAAGTCTCTGCGAAAGGAGGCGAGGGGCTGGTTCAATGAGAAAGCAGACTTACATTATGGACATGATACTAATGTGTATGCAAGAGCTTCAGCATGGTATTTTGTTACATATCATCACACTTACTGGGGCTGGTCCGATGGCAGAAAGAATCATGGCCATTTTCTTAGCTTTCCATGTTGTCCGAATGTTTTGAGTGCCCAGTCCAAGTCCCGAAGCTTCCAACTTTCCTATCAATCGGAAGGTGCTATGGAGGGATCCTTCTGTTTGGAGTCTAGAGAGCTATTCATAAGAATTTTGAAAATTTTCAAGTGGGGATGTGATGCAGAAAAGGCGATTGAAGTGATGAAGCTCAAAGTTGATCACAGGGATTGA

Protein sequence

MGKTIQLFGFPRSVSQESVKTFVERFTGVGTIDAINTKRSKGRGRRLYAIIQFTDEEGAKSIISKATEGLFYGTSYLKATEWNHDILPDPLVFKYNFKGLKLNLGCQISKESFSVLWTESNVSVDFRFERRKLYFFISYPHVDYMLVLHYENIWQVELHKPQGQSVDYLLIQLFGAPRIYERDAISSGHITEDPFLNFSMEIDTQWFRATDFTPSCCIGQSAALCLEIPYGRQLPNFHDKFAYFKEIKGKFTLVSGSTYSSNVNLVPVVRPPLTINLPYAILFKINLLVQQGCLPGPALDISFYQMVDPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILSLNEGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEELDKMYSTELSPRASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTAARIRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESVGGVNYVFSDGIGKISDSFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDPLKAQQALELMSPGENTKILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFIPNGRAMMGCLDETRNLEYGEVFVQCSAHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPCLHPGDVRVLTAVDVPSLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPKQVEPMDYTPVPSKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSKPCIELAKLFSIAVDFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDNIGPNIKNIRSFTYTPEVARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYKIKTEAELINGGSLTSSLSFTMKNEAESIAMAVKSLRKEARGWFNEKADLHYGHDTNVYARASAWYFVTYHHTYWGWSDGRKNHGHFLSFPCCPNVLSAQSKSRSFQLSYQSEGAMEGSFCLESRELFIRILKIFKWGCDAEKAIEVMKLKVDHRD
Homology
[Close]
BLAST of HG10014758 vs. NCBI nr
Match: XP_038877934.1 (RNA-dependent RNA polymerase 1-like isoform X1 [Benincasa hispida] >XP_038877936.1 RNA-dependent RNA polymerase 1-like isoform X1 [Benincasa hispida] >XP_038877937.1 RNA-dependent RNA polymerase 1-like isoform X1 [Benincasa hispida] >XP_038877938.1 RNA-dependent RNA polymerase 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 2122.4 bits (5498), Expect = 0.0e+00
Identity = 1027/1096 (93.70%), Postives = 1061/1096 (96.81%), Query Frame = 0 

Query: 1    MGKTIQLFGFPRSVSQESVKTFVERFTGVGTIDAINTKRSKGRGRRLYAIIQFTDEEGAK 60
            MGKTIQLFGFP  V QESVKTFVERFTG GTIDAINTKRSKGRGRR+YAIIQFTDEEGAK
Sbjct: 1    MGKTIQLFGFPSGVLQESVKTFVERFTGKGTIDAINTKRSKGRGRRMYAIIQFTDEEGAK 60

Query: 61   SIISKATEGLFYGTSYLKATEWNHDILPDPLVFKYNFKGLKLNLGCQISKESFSVLWTES 120
            SIISKATEGLFYGTSYLKA EW HDILPDP VF+YNFKGL+L+LGCQISKESFS+LWTES
Sbjct: 61   SIISKATEGLFYGTSYLKAREWKHDILPDPPVFEYNFKGLRLHLGCQISKESFSMLWTES 120

Query: 121  NVSVDFRFERRKLYFFISYPHVDYMLVLHYENIWQVELHKPQGQSVDYLLIQLFGAPRIY 180
            NVSVDF FE+RKLYFFISYPHVDYMLVL YENIWQVELHKPQGQSVDYLLIQLFGAPRIY
Sbjct: 121  NVSVDFGFEQRKLYFFISYPHVDYMLVLRYENIWQVELHKPQGQSVDYLLIQLFGAPRIY 180

Query: 181  ERDAISSGHITEDPFLNFSMEIDTQWFRATDFTPSCCIGQSAALCLEIPYGRQLPNFHDK 240
            ERDAIS GHI  DPFLNFSME+DTQWFRATDFTPSCCIGQSAA+CLEIPYGRQLPNFHDK
Sbjct: 181  ERDAISLGHIIGDPFLNFSMEVDTQWFRATDFTPSCCIGQSAAICLEIPYGRQLPNFHDK 240

Query: 241  FAYFKEIKGKFTLVSGSTYSSNVNLVPVVRPPLTINLPYAILFKINLLVQQGCLPGPALD 300
            FAYFKE  GKF+LVSGSTYSSNVNLVPVVRPPLTINLPYAILFKINLLVQQGCLPGPALD
Sbjct: 241  FAYFKEFNGKFSLVSGSTYSSNVNLVPVVRPPLTINLPYAILFKINLLVQQGCLPGPALD 300

Query: 301  ISFYQMVDPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILSLN 360
            I+FYQMVDP++YNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFK KNPPQPPILSL+
Sbjct: 301  INFYQMVDPRIYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKSKNPPQPPILSLS 360

Query: 361  EGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEELDKMYSTELSP 420
            EGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYL+NFLRVSFVDEELDKMYSTELSP
Sbjct: 361  EGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLDNFLRVSFVDEELDKMYSTELSP 420

Query: 421  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTAAR 480
            RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTAAR
Sbjct: 421  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTAAR 480

Query: 481  IRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESVGGVNYVFSDG 540
            IRRWMG+FH IRNVAKYAARLGQSFGSSTET SVSRREVNLIPDIEVES GGVNYVFSDG
Sbjct: 481  IRRWMGDFHCIRNVAKYAARLGQSFGSSTETLSVSRREVNLIPDIEVESGGGVNYVFSDG 540

Query: 541  IGKISDSFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600
            IGKIS SFA+KVA+KCGIRH PSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT
Sbjct: 541  IGKISVSFAKKVAKKCGIRHMPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600

Query: 601  KLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDPLKAQQALEL 660
            KLDVLSWSKYHPCFLNRQLITLLSTLGV+DHVFESKQ+ELIDELDTIFSDP+KAQ+ALEL
Sbjct: 601  KLDVLSWSKYHPCFLNRQLITLLSTLGVQDHVFESKQRELIDELDTIFSDPMKAQRALEL 660

Query: 661  MSPGENTKILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFIPNGRAMMGCLD 720
            MSPGENTKILKEMMLCGY+PDSEPFLWMMLHTFRES+LLELRRKSRIFIPNGRAM+GCLD
Sbjct: 661  MSPGENTKILKEMMLCGYRPDSEPFLWMMLHTFRESKLLELRRKSRIFIPNGRAMLGCLD 720

Query: 721  ETRNLEYGEVFVQCSAHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPCLHPGDVRVLTA 780
            ETRNLEYGEVFVQCSAH QL +D+IIFKR KSN  FIVTGTVVV KNPCLHPGDVRVLTA
Sbjct: 721  ETRNLEYGEVFVQCSAHQQLRDDHIIFKRRKSNRHFIVTGTVVVAKNPCLHPGDVRVLTA 780

Query: 781  VDVPSLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPKQVEPMDYTPVP 840
            VDVP+LHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP QVEPMDYTPVP
Sbjct: 781  VDVPALHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPMDYTPVP 840

Query: 841  SKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSKPCIELAKLFSIAV 900
            SKLLDHD+TMEEVQEYFANYMVNDSLGIIANAHTAFADKE EKAMS PCIELAKLFSIAV
Sbjct: 841  SKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPEKAMSNPCIELAKLFSIAV 900

Query: 901  DFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDNIGPNIKNIRSFTY 960
            DFPKTG+PALIPANLRVQEYPDFMDKADKVTY+S NVLGKLFRMLDNIGPNIKNIRSF Y
Sbjct: 901  DFPKTGIPALIPANLRVQEYPDFMDKADKVTYESKNVLGKLFRMLDNIGPNIKNIRSFAY 960

Query: 961  TPEVARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYKIKTEAELINGGSLTSS 1020
            TP+VAR+AYDPDMEVEGFEEYLDDA+YHKNNYDMRLGNLMHYYKIKTEAELI+GGSLTSS
Sbjct: 961  TPDVAREAYDPDMEVEGFEEYLDDAIYHKNNYDMRLGNLMHYYKIKTEAELISGGSLTSS 1020

Query: 1021 LSFTMKNEAESIAMAVKSLRKEARGWFNEKADLHYGHDTNVYARASAWYFVTYHHTYWGW 1080
            LSFT KNEAESI MAVKSLRKEARGWFNE ADLHYGHDTNVYARASAWYFVTYHHTYWGW
Sbjct: 1021 LSFTKKNEAESITMAVKSLRKEARGWFNENADLHYGHDTNVYARASAWYFVTYHHTYWGW 1080

Query: 1081 SDGRKNHGHFLSFPCC 1097
            SDGRKNHGHFLSFP C
Sbjct: 1081 SDGRKNHGHFLSFPWC 1096

[Close]
BLAST of HG10014758 vs. NCBI nr
Match: NP_001267682.1 (RNA-dependent RNA polymerase 1-like [Cucumis sativus] >XP_011654424.1 RNA-dependent RNA polymerase 1-like isoform X1 [Cucumis sativus] >ADU77016.1 RNA-dependent RNA polymerase 1b [Cucumis sativus] >KGN50762.1 hypothetical protein Csa_005874 [Cucumis sativus])

HSP 1 Score: 2063.5 bits (5345), Expect = 0.0e+00
Identity = 1005/1096 (91.70%), Postives = 1043/1096 (95.16%), Query Frame = 0 

Query: 1    MGKTIQLFGFPRSVSQESVKTFVERFTGVGTIDAINTKRSKGRGRRLYAIIQFTDEEGAK 60
            MGKTIQLFGFP  V QESVKTFVE  TG GTIDAINTKRSKG GRR+YAIIQFTDEEGAK
Sbjct: 1    MGKTIQLFGFPSGVLQESVKTFVEGITGTGTIDAINTKRSKGGGRRVYAIIQFTDEEGAK 60

Query: 61   SIISKATEGLFYGTSYLKATEWNHDILPDPLVFKYNFKGLKLNLGCQISKESFSVLWTES 120
            SIISKATE L YGTSYLKA E  HDILPDPLVF YNFK L+L+LGCQISKESFSVLWTES
Sbjct: 61   SIISKATERLCYGTSYLKAREMKHDILPDPLVFDYNFKALRLHLGCQISKESFSVLWTES 120

Query: 121  NVSVDFRFERRKLYFFISYPHVDYMLVLHYENIWQVELHKPQGQSVDYLLIQLFGAPRIY 180
            NVSVDF FE RKLYFFISYP VDYMLVL YENIWQVELHKP GQSVDYLLIQLFGAPRIY
Sbjct: 121  NVSVDFGFELRKLYFFISYPRVDYMLVLRYENIWQVELHKPHGQSVDYLLIQLFGAPRIY 180

Query: 181  ERDAISSGHITEDPFLNFSMEIDTQWFRATDFTPSCCIGQSAALCLEIPYGRQLPNFHDK 240
            ERDA S G ITEDPFLNFS EIDTQWFRATDFTPSC IGQSAALCLEIPYGRQLPNFHDK
Sbjct: 181  ERDARSFGLITEDPFLNFSTEIDTQWFRATDFTPSCSIGQSAALCLEIPYGRQLPNFHDK 240

Query: 241  FAYFKEIKGKFTLVSGSTYSSNVNLVPVVRPPLTINLPYAILFKINLLVQQGCLPGPALD 300
            FAYFKEIKGKFTLVSGSTYSSNVNLVPVV PP TINLPY ILFKINLLVQQGCLPGPALD
Sbjct: 241  FAYFKEIKGKFTLVSGSTYSSNVNLVPVVTPPRTINLPYTILFKINLLVQQGCLPGPALD 300

Query: 301  ISFYQMVDPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILSLN 360
            ISFYQMVD Q+YN A IDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPIL+LN
Sbjct: 301  ISFYQMVDSQIYNTAVIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILTLN 360

Query: 361  EGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEELDKMYSTELSP 420
            EGLVYVHRVQVTPCKVYFCGPEVN+SNRVLRRYPDY++NFLRVSFVDEEL KMYSTELSP
Sbjct: 361  EGLVYVHRVQVTPCKVYFCGPEVNISNRVLRRYPDYIDNFLRVSFVDEELGKMYSTELSP 420

Query: 421  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTAAR 480
            RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAP++ LTAA+
Sbjct: 421  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPKNELTAAK 480

Query: 481  IRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESVGGVNYVFSDG 540
            IR+WMG+FH IRNVAKYAARLGQSFGSSTET SVSRREV +IPDIEVES  GVNYVFSDG
Sbjct: 481  IRQWMGDFHNIRNVAKYAARLGQSFGSSTETLSVSRREVKVIPDIEVESGSGVNYVFSDG 540

Query: 541  IGKISDSFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600
            IGKI+ SFARKVA+KCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT
Sbjct: 541  IGKIAASFARKVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600

Query: 601  KLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDPLKAQQALEL 660
            KLDVLSWSKYHPCFLNRQLITLLSTLGV+DHVFESKQ+ELIDELDTIFSDPLKAQQALEL
Sbjct: 601  KLDVLSWSKYHPCFLNRQLITLLSTLGVQDHVFESKQQELIDELDTIFSDPLKAQQALEL 660

Query: 661  MSPGENTKILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFIPNGRAMMGCLD 720
            MSPGENTKILKEMMLCGYKPDSEPFL MMLHTFRES+L+ELR KSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTKILKEMMLCGYKPDSEPFLRMMLHTFRESKLMELRMKSRIFIPNGRAMMGCLD 720

Query: 721  ETRNLEYGEVFVQCSAHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPCLHPGDVRVLTA 780
            ETRNLEYGEVFVQCSAH QLH+D +IFKR KSN  FIVTGTVVV KNPCLHPGDVRVLTA
Sbjct: 721  ETRNLEYGEVFVQCSAHQQLHDDRVIFKRIKSNRHFIVTGTVVVAKNPCLHPGDVRVLTA 780

Query: 781  VDVPSLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPKQVEPMDYTPVP 840
            VDVPSLHHM+DCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP+QVEPMDYTPVP
Sbjct: 781  VDVPSLHHMIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVP 840

Query: 841  SKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSKPCIELAKLFSIAV 900
            S++LDHD+TMEEVQEYFANYMVNDSLGIIANAHTAFADKE +KAMS PCI+LAKLFSIAV
Sbjct: 841  SQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAV 900

Query: 901  DFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDNIGPNIKNIRSFTY 960
            DFPKTGVPALIPANLRV+EYPDFMDKADKVTY+S+NVLGKLFRMLD+IGPNIKNIRSF Y
Sbjct: 901  DFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNY 960

Query: 961  TPEVARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYKIKTEAELINGGSLTSS 1020
            TPE+ARQ YDPDMEVEGFEEYLDDA+YHKNNYDMRLGNLMHY+KIKTEAELI+GGSLTSS
Sbjct: 961  TPEMARQDYDPDMEVEGFEEYLDDAIYHKNNYDMRLGNLMHYHKIKTEAELISGGSLTSS 1020

Query: 1021 LSFTMKNEAESIAMAVKSLRKEARGWFNEKADLHYGHDTNVYARASAWYFVTYHHTYWGW 1080
            LSFTMKNEAESI +AVKSLRKEARGWFNEKADLHYGH TNVYARASAWYFVTYHHTYWGW
Sbjct: 1021 LSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGW 1080

Query: 1081 SDGRKNHGHFLSFPCC 1097
            SDGRKNHGHFLSFP C
Sbjct: 1081 SDGRKNHGHFLSFPWC 1096

[Close]
BLAST of HG10014758 vs. NCBI nr
Match: ALM88234.1 (RNA-dependent RNA polymerase 1b [Cucumis sativus])

HSP 1 Score: 2055.0 bits (5323), Expect = 0.0e+00
Identity = 1002/1096 (91.42%), Postives = 1040/1096 (94.89%), Query Frame = 0 

Query: 1    MGKTIQLFGFPRSVSQESVKTFVERFTGVGTIDAINTKRSKGRGRRLYAIIQFTDEEGAK 60
            MGKTIQLFGFP  V QESVKTFVE  TG GTIDAINTKRSKG GRR+YAIIQFTDEEGAK
Sbjct: 1    MGKTIQLFGFPSGVLQESVKTFVEGITGTGTIDAINTKRSKGGGRRVYAIIQFTDEEGAK 60

Query: 61   SIISKATEGLFYGTSYLKATEWNHDILPDPLVFKYNFKGLKLNLGCQISKESFSVLWTES 120
            SIISKATE L YGTSYLKA E  HDILPDPLVF YNFK L+L+LGCQISKESFSVLWTES
Sbjct: 61   SIISKATERLCYGTSYLKAREMKHDILPDPLVFDYNFKALRLHLGCQISKESFSVLWTES 120

Query: 121  NVSVDFRFERRKLYFFISYPHVDYMLVLHYENIWQVELHKPQGQSVDYLLIQLFGAPRIY 180
            NVSVDF FE RKLYFFISYP VDYMLVL YENIWQVELHKP GQSVDYLLIQLFGAPRIY
Sbjct: 121  NVSVDFGFELRKLYFFISYPRVDYMLVLRYENIWQVELHKPHGQSVDYLLIQLFGAPRIY 180

Query: 181  ERDAISSGHITEDPFLNFSMEIDTQWFRATDFTPSCCIGQSAALCLEIPYGRQLPNFHDK 240
            ERDA S G ITEDPFLNFS EIDTQWFRATDFTPSC IGQSAALCLEIPYGRQLPNFHDK
Sbjct: 181  ERDARSFGLITEDPFLNFSTEIDTQWFRATDFTPSCSIGQSAALCLEIPYGRQLPNFHDK 240

Query: 241  FAYFKEIKGKFTLVSGSTYSSNVNLVPVVRPPLTINLPYAILFKINLLVQQGCLPGPALD 300
            FAYFKEIKGKFTLVSGSTYSSNVNLVPVV PP TINLPY ILFKINLLVQQGCLPGPALD
Sbjct: 241  FAYFKEIKGKFTLVSGSTYSSNVNLVPVVTPPRTINLPYTILFKINLLVQQGCLPGPALD 300

Query: 301  ISFYQMVDPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILSLN 360
            ISFYQMVD Q+YN A IDHALKKLLHLKECCYNPS WLDEEYRKYFKLKNPPQPPIL+LN
Sbjct: 301  ISFYQMVDSQIYNTAVIDHALKKLLHLKECCYNPSIWLDEEYRKYFKLKNPPQPPILTLN 360

Query: 361  EGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEELDKMYSTELSP 420
            EGLVYVHRVQVTPCKVYFCGPEVN+SNRVLRR PDY++NFLRVSFVDEEL KMYSTELSP
Sbjct: 361  EGLVYVHRVQVTPCKVYFCGPEVNISNRVLRRCPDYIDNFLRVSFVDEELGKMYSTELSP 420

Query: 421  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTAAR 480
            RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAP++ LTAA+
Sbjct: 421  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPKNELTAAK 480

Query: 481  IRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESVGGVNYVFSDG 540
            IR+WMG+FH IRNVAKYAARLGQSFGSSTET SVSRREV +IPDIEVES  GVNYVFSDG
Sbjct: 481  IRQWMGDFHNIRNVAKYAARLGQSFGSSTETLSVSRREVKVIPDIEVESGSGVNYVFSDG 540

Query: 541  IGKISDSFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600
            IGKI+ SFARKVA+KCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT
Sbjct: 541  IGKIAASFARKVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600

Query: 601  KLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDPLKAQQALEL 660
            KLDVLSWSKYHPCFLNRQLIT LSTLGV+DHVFESKQ+ELIDELDTIFSDPLKAQQALEL
Sbjct: 601  KLDVLSWSKYHPCFLNRQLITFLSTLGVQDHVFESKQQELIDELDTIFSDPLKAQQALEL 660

Query: 661  MSPGENTKILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFIPNGRAMMGCLD 720
            MSPGENTKILKEMMLCGYKPDSEPFL MMLHTFRES+L+ELR KSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTKILKEMMLCGYKPDSEPFLRMMLHTFRESKLMELRMKSRIFIPNGRAMMGCLD 720

Query: 721  ETRNLEYGEVFVQCSAHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPCLHPGDVRVLTA 780
            ETRNLEYGEVFVQCSAH QLH+D +IFKR KSN  FIVTGTVVV KNPCLHPGDVRVLTA
Sbjct: 721  ETRNLEYGEVFVQCSAHQQLHDDRVIFKRIKSNRHFIVTGTVVVAKNPCLHPGDVRVLTA 780

Query: 781  VDVPSLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPKQVEPMDYTPVP 840
            VDVPSLHHM+DCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP+QVEPMDYTPVP
Sbjct: 781  VDVPSLHHMIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVP 840

Query: 841  SKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSKPCIELAKLFSIAV 900
            S++LDHD+TMEEVQEYFANYMVNDSLGIIANAHTAFADKE +KAMS PCI+LAKLFSIAV
Sbjct: 841  SQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAV 900

Query: 901  DFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDNIGPNIKNIRSFTY 960
            DFPKTGVPALIPANLRV+EYPDFMDKADKVTY+S+NVLGKLFRMLD+IGPNIKNIRSF Y
Sbjct: 901  DFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNY 960

Query: 961  TPEVARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYKIKTEAELINGGSLTSS 1020
            TPE+ARQ YDPDMEVEGFEEYLDDA+YHKNNYDMRLGNLMHY+KIKTEAELI+GGSLTSS
Sbjct: 961  TPEMARQDYDPDMEVEGFEEYLDDAIYHKNNYDMRLGNLMHYHKIKTEAELISGGSLTSS 1020

Query: 1021 LSFTMKNEAESIAMAVKSLRKEARGWFNEKADLHYGHDTNVYARASAWYFVTYHHTYWGW 1080
            LSFTMKNEAESI +AVKSLRKEARGWFNEKADLHYGH TNVYARASAWYFVTYHHTYWGW
Sbjct: 1021 LSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGW 1080

Query: 1081 SDGRKNHGHFLSFPCC 1097
            SDGRKNHGHFLSFP C
Sbjct: 1081 SDGRKNHGHFLSFPRC 1096

[Close]
BLAST of HG10014758 vs. NCBI nr
Match: BAL63010.1 (RNA-dependent RNA polymerase 1 [Cucumis sativus])

HSP 1 Score: 2051.2 bits (5313), Expect = 0.0e+00
Identity = 1000/1096 (91.24%), Postives = 1039/1096 (94.80%), Query Frame = 0 

Query: 1    MGKTIQLFGFPRSVSQESVKTFVERFTGVGTIDAINTKRSKGRGRRLYAIIQFTDEEGAK 60
            MGKTIQLFGFP  V QESVKTFVE  TG GTIDAINTKRSKG GRR+YAIIQFTDEEGAK
Sbjct: 1    MGKTIQLFGFPSGVLQESVKTFVEGITGTGTIDAINTKRSKGGGRRVYAIIQFTDEEGAK 60

Query: 61   SIISKATEGLFYGTSYLKATEWNHDILPDPLVFKYNFKGLKLNLGCQISKESFSVLWTES 120
            SIISKATE L YGTSYLKA E  HDILPDPLVF YNFK L+L+LGCQISKESFSVLWTES
Sbjct: 61   SIISKATERLCYGTSYLKAREMKHDILPDPLVFDYNFKALRLHLGCQISKESFSVLWTES 120

Query: 121  NVSVDFRFERRKLYFFISYPHVDYMLVLHYENIWQVELHKPQGQSVDYLLIQLFGAPRIY 180
            NVSVDF F+ RKLYFFISYP VDYMLVL YENIWQVELHKP GQSVDYLLIQLFGAPRIY
Sbjct: 121  NVSVDFGFDVRKLYFFISYPRVDYMLVLRYENIWQVELHKPHGQSVDYLLIQLFGAPRIY 180

Query: 181  ERDAISSGHITEDPFLNFSMEIDTQWFRATDFTPSCCIGQSAALCLEIPYGRQLPNFHDK 240
            ERDA S G ITEDPFLNFS EIDTQWFRATDFTPSC IGQSAALCLEI YGRQLPNFHDK
Sbjct: 181  ERDARSFGLITEDPFLNFSTEIDTQWFRATDFTPSCSIGQSAALCLEILYGRQLPNFHDK 240

Query: 241  FAYFKEIKGKFTLVSGSTYSSNVNLVPVVRPPLTINLPYAILFKINLLVQQGCLPGPALD 300
            FAYFKEIKGKFTLVSGSTYSSNVNLVPVV PP TINLPY ILFKINLLVQQGCLPGPALD
Sbjct: 241  FAYFKEIKGKFTLVSGSTYSSNVNLVPVVTPPRTINLPYTILFKINLLVQQGCLPGPALD 300

Query: 301  ISFYQMVDPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILSLN 360
            ISFYQMVD Q+YN A IDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPIL+LN
Sbjct: 301  ISFYQMVDSQIYNTAVIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILTLN 360

Query: 361  EGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEELDKMYSTELSP 420
            EGLVYVHRVQVTPCKVYFCGPEVN+SNRVLRRYPDY++NFLRVSFVDEEL KMYSTELSP
Sbjct: 361  EGLVYVHRVQVTPCKVYFCGPEVNISNRVLRRYPDYIDNFLRVSFVDEELGKMYSTELSP 420

Query: 421  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTAAR 480
            RASSSLEDGKTKI KRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAP++ LTAA+
Sbjct: 421  RASSSLEDGKTKILKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPKNELTAAK 480

Query: 481  IRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESVGGVNYVFSDG 540
            IR+WMG+FH IRNVAKYAARLGQ FGSSTET SVSRREV +IPDIEVES  GVNYVFSDG
Sbjct: 481  IRQWMGDFHNIRNVAKYAARLGQPFGSSTETLSVSRREVKVIPDIEVESGSGVNYVFSDG 540

Query: 541  IGKISDSFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600
            IGKI+ SFARKVA+KCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT
Sbjct: 541  IGKIAASFARKVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600

Query: 601  KLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDPLKAQQALEL 660
            KLDVLSWSKYHPCFLNRQLITLLSTLGV+DHVFESKQ+ELIDELDTIFSDPLKAQQALEL
Sbjct: 601  KLDVLSWSKYHPCFLNRQLITLLSTLGVQDHVFESKQQELIDELDTIFSDPLKAQQALEL 660

Query: 661  MSPGENTKILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFIPNGRAMMGCLD 720
            MSPGENTKILKEMMLCGYKPDSEPFL MMLHTFRES+L+ELR KSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTKILKEMMLCGYKPDSEPFLRMMLHTFRESKLMELRMKSRIFIPNGRAMMGCLD 720

Query: 721  ETRNLEYGEVFVQCSAHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPCLHPGDVRVLTA 780
            ETRNLEYGEVF QCSAH QLH+D +IFKR KSN  FIVTGTVVV KNPCLHPGDVRVLTA
Sbjct: 721  ETRNLEYGEVFWQCSAHQQLHDDRVIFKRIKSNRHFIVTGTVVVAKNPCLHPGDVRVLTA 780

Query: 781  VDVPSLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPKQVEPMDYTPVP 840
            VDVPSLHHM+DCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP+QVEPMDYTPVP
Sbjct: 781  VDVPSLHHMIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVP 840

Query: 841  SKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSKPCIELAKLFSIAV 900
            S++LDHD+TMEEVQEYFANYMVNDSLGIIANAHTAFADKE +KAMS PCI+LAKLFSIAV
Sbjct: 841  SQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAV 900

Query: 901  DFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDNIGPNIKNIRSFTY 960
            DFPKTGVPALIPANLRV+EYPDFMDKADKVTY+S+NVLGKLFRMLD+IGPNIKNIRSF Y
Sbjct: 901  DFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNY 960

Query: 961  TPEVARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYKIKTEAELINGGSLTSS 1020
            TPE+ARQ YDPDMEVEGFEEYLDDA+YHKNNYDMRLGNLMHY+KIKTEAELI+GGSLTSS
Sbjct: 961  TPEMARQDYDPDMEVEGFEEYLDDAIYHKNNYDMRLGNLMHYHKIKTEAELISGGSLTSS 1020

Query: 1021 LSFTMKNEAESIAMAVKSLRKEARGWFNEKADLHYGHDTNVYARASAWYFVTYHHTYWGW 1080
            LSFTMKNEAESI +AVKSLRKEARGWFNEKADLHYGH TNVYARASAWYFVTYHHTYWGW
Sbjct: 1021 LSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGW 1080

Query: 1081 SDGRKNHGHFLSFPCC 1097
            SDGRKNHGHFLSFP C
Sbjct: 1081 SDGRKNHGHFLSFPWC 1096

[Close]
BLAST of HG10014758 vs. NCBI nr
Match: XP_022943176.1 (RNA-dependent RNA polymerase 1-like [Cucurbita moschata])

HSP 1 Score: 1922.1 bits (4978), Expect = 0.0e+00
Identity = 936/1096 (85.40%), Postives = 1004/1096 (91.61%), Query Frame = 0 

Query: 1    MGKTIQLFGFPRSVSQESVKTFVERFTGVGTIDAINTKRSKGRGRRLYAIIQFTDEEGAK 60
            MGKTIQL+GFP  V QESVK FVERFTG G+IDAIN KRS+GRG+RLYAIIQF D+ GAK
Sbjct: 1    MGKTIQLYGFPSGVLQESVKAFVERFTGEGSIDAINVKRSRGRGKRLYAIIQFIDDVGAK 60

Query: 61   SIISKATEGLFYGTSYLKATEWNHDILPDPLVFKYNFKGLKLNLGCQISKESFSVLWTES 120
             IIS A   L YGTSYLKA EW  DIL DPLVF+YNFKGL+L+LGCQIS+E F VLW ES
Sbjct: 61   LIISLANASLRYGTSYLKAREWKQDILQDPLVFEYNFKGLELHLGCQISREEFFVLWRES 120

Query: 121  NVSVDFRFERRKLYFFISYPHVDYMLVLHYENIWQVELHKPQGQSVDYLLIQLFGAPRIY 180
            NVSV+F FERR L FFIS+P VDYMLVL YENIWQVELHKPQGQS+DYLLIQL GAPRIY
Sbjct: 121  NVSVNFEFERRDLKFFISHPRVDYMLVLRYENIWQVELHKPQGQSIDYLLIQLVGAPRIY 180

Query: 181  ERDAISSGHITEDPFLNFSMEIDTQWFRATDFTPSCCIGQSAALCLEIPYGRQLPNFHDK 240
            ERD    GHI+EDPFL+FS E+DT+WFRATDFTPSCCIGQS ALCLEIPYGR LPNFHDK
Sbjct: 181  ERDTKLFGHISEDPFLSFSKEMDTKWFRATDFTPSCCIGQSGALCLEIPYGRLLPNFHDK 240

Query: 241  FAYFKEIKGKFTLVSGSTYSSNVNLVPVVRPPLTINLPYAILFKINLLVQQGCLPGPALD 300
            FAYF EIKGKFTL SGSTYSSNVNLVPVVRPPL+I+LPYAILFKINLLVQQGCLPGP+LD
Sbjct: 241  FAYFNEIKGKFTLASGSTYSSNVNLVPVVRPPLSIHLPYAILFKINLLVQQGCLPGPSLD 300

Query: 301  ISFYQMVDPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILSLN 360
            ISFY+MVDPQ++NIAFID AL+KL  LKECCYNPSKWL EEYRKY KL NPPQPP LSL+
Sbjct: 301  ISFYEMVDPQIHNIAFIDRALRKLYDLKECCYNPSKWLGEEYRKYSKLTNPPQPPNLSLD 360

Query: 361  EGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEELDKMYSTELSP 420
            EGLVYVHRVQVTPC+VYFCGPEVNVSNRVLRRYP+YL+NFLRVSFVDEELDK+YSTELSP
Sbjct: 361  EGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTELSP 420

Query: 421  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTAAR 480
            R SSSLEDGKTKIFKRILSVL+DGITIGDKKFEFLAYSSSQLRENA WMFAPRDG+TAA+
Sbjct: 421  RESSSLEDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSSQLRENAVWMFAPRDGITAAK 480

Query: 481  IRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESVGGVNYVFSDG 540
            IR+WMG+FH IRNVAKYAARLGQSFGSSTET+SVSRREV +IPDIEV+S  G+NYVFSDG
Sbjct: 481  IRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVKVIPDIEVKSDAGINYVFSDG 540

Query: 541  IGKISDSFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600
            IGKIS SFAR+VA+KC IRHTPSAFQIRYAGFKGVISVDPTS VKLSLRNSMLKYESTDT
Sbjct: 541  IGKISASFAREVARKCHIRHTPSAFQIRYAGFKGVISVDPTSFVKLSLRNSMLKYESTDT 600

Query: 601  KLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDPLKAQQALEL 660
            KLDVLSWS+YHPC+LNRQLITLLSTLGV+D +FESKQKELID+LDTIF DPLKAQQALEL
Sbjct: 601  KLDVLSWSRYHPCYLNRQLITLLSTLGVQDDIFESKQKELIDQLDTIFMDPLKAQQALEL 660

Query: 661  MSPGENTKILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFIPNGRAMMGCLD 720
            MSPGENT ILKE++ CGY+PDSEPFL+MMLHTFRES+LLELRRKSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTNILKEIISCGYRPDSEPFLYMMLHTFRESKLLELRRKSRIFIPNGRAMMGCLD 720

Query: 721  ETRNLEYGEVFVQCSAHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPCLHPGDVRVLTA 780
            ET NLEYGEVFVQCSAH QLHND+IIFKRSKSN  FIVTGTVVV KNPCLHPGDVRVLTA
Sbjct: 721  ETGNLEYGEVFVQCSAHQQLHNDHIIFKRSKSNQHFIVTGTVVVAKNPCLHPGDVRVLTA 780

Query: 781  VDVPSLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPKQVEPMDYTPVP 840
            VDVPSLHHMVDC+VFPQKG RPHPNECSGSDLDGDIYFVCWDPDLIPP+QVEPMDYTPVP
Sbjct: 781  VDVPSLHHMVDCLVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVP 840

Query: 841  SKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSKPCIELAKLFSIAV 900
            S+LLDHD+TMEEVQEYFANYMVNDSLGIIANAHTAFAD   EKAMS+PCI+LAKLFSIAV
Sbjct: 841  SRLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADSRPEKAMSEPCIKLAKLFSIAV 900

Query: 901  DFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDNIGPNIKNIRSFTY 960
            DFPKTGVPALI A+LRVQ YPDFMDK DK +YKS NVLGKLFRMLD+I P I +I+S  +
Sbjct: 901  DFPKTGVPALISADLRVQVYPDFMDKPDKQSYKSHNVLGKLFRMLDDIEPRI-SIKSVKF 960

Query: 961  TPEVARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYKIKTEAELINGGSLTSS 1020
            T E+ARQAYDPDMEV+GFEEYLDDALYHKNNYDMRLGNLM YYKIKTEAELI+G SLT S
Sbjct: 961  TREIARQAYDPDMEVKGFEEYLDDALYHKNNYDMRLGNLMKYYKIKTEAELISGVSLTKS 1020

Query: 1021 LSFTMKNEAESIAMAVKSLRKEARGWFNEKADLHYGHDTNVYARASAWYFVTYHHTYWGW 1080
             SFT KNEAESI MAVKSLRKEARGWFNE A LH+GHD N YARASAWYFVTYH++YWGW
Sbjct: 1021 SSFTKKNEAESIIMAVKSLRKEARGWFNENAGLHFGHDNNAYARASAWYFVTYHYSYWGW 1080

Query: 1081 SDGRKNHGHFLSFPCC 1097
              G KN  HFLSFP C
Sbjct: 1081 Y-GEKNESHFLSFPWC 1094

[Close]
BLAST of HG10014758 vs. ExPASy Swiss-Prot
Match: Q9LQV2 (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1)

HSP 1 Score: 1323.1 bits (3423), Expect = 0.0e+00
Identity = 668/1107 (60.34%), Postives = 818/1107 (73.89%), Query Frame = 0 

Query: 1    MGKTIQLFGFPRSVSQESVKTFVERFTGVGTIDAINTKRSKGRGRRLYAIIQFTDEEGAK 60
            MGKTIQ+FGFP  VS E VK F+ER TG GT+ AI  ++ K  G R+YAI+QFT E   +
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60

Query: 61   SIISKATEGLFYGTSYLKATEWNHDILPDPLVFKYNFKGLKLNLGCQISKESFSVLWTES 120
             II+ A E L+YG SYLKA E   DI+P P    +   GLK+  GCQ+S + F  LW+  
Sbjct: 61   LIITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQ 120

Query: 121  NVSVDFRFERRKLYFFISYPHVDYMLVLHYENIWQVELHKPQGQSVDYLLIQLFGAPRIY 180
            +V V F    RKL+F  S+   DY L L YENIWQ++LH PQG+S  +L+IQ+ GAP+I+
Sbjct: 121  DVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIF 180

Query: 181  ERDAISSGHITEDPFLN--------FSMEIDTQWFRATDFTPSCCIGQSAALCLEIPYGR 240
            E+         ED  +N        +S   D QW R TDFT S CIGQS A CLE+P   
Sbjct: 181  EK---------EDQPINLLFGIMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHL 240

Query: 241  QLPNFHDKFAYFKEIK-GKFTLVSGSTYSSNVN-LVPVVRPPLTINLPYAILFKINLLVQ 300
             +P+F + FA + E +   F + SGS+YSSN N LVPVV PP   +LP+ ILFK+N LVQ
Sbjct: 241  NVPDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQ 300

Query: 301  QGCLPGPALDISFYQMVDPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKN 360
              CL GPALD+ FY++++ + Y+ A IDH L+KL HL ECCY P+ WL +EY+K+     
Sbjct: 301  NACLSGPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGK 360

Query: 361  PPQPPILSLNEGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEEL 420
             P  P +SL++GLVY++RVQVTP +VYF GPEVNVSNRVLR Y  Y+NNFLRVSFVDE+L
Sbjct: 361  LPLSPTISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDL 420

Query: 421  DKMYSTELSPRASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMF 480
            +K+ S +LSPR+S+     +TK++ RI SVLRDGI IGDKKFEFLA+SSSQLREN+AWMF
Sbjct: 421  EKVRSMDLSPRSST---QRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMF 480

Query: 481  APRDGLTAARIRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESV 540
            AP D +TAA IR WMG+F  IRNVAKYAARLGQSF SS ET +V   E+ +IPD+E+ S+
Sbjct: 481  APIDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISL 540

Query: 541  GGVNYVFSDGIGKISDSFARKVAQKCGI-RHTPSAFQIRYAGFKGVISVDPTSSVKLSLR 600
             G  YVFSDGIGKIS  FARKVA+KCG+   +PSAFQIRY G+KGV++VDP SS KLSLR
Sbjct: 541  -GTRYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLR 600

Query: 601  NSMLKYESTDTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFS 660
             SM K+ES +TKLDVL+WSKY PC++NRQLITLLSTLGV D VFE KQ+E++D LD I +
Sbjct: 601  KSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILT 660

Query: 661  DPLKAQQALELMSPGENTKILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFI 720
             PL+A +AL LM+PGENT ILK ++LCGYKPD+EPFL MML  FR S+LLELR K+RIFI
Sbjct: 661  HPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFI 720

Query: 721  PNGRAMMGCLDETRNLEYGEVFVQCSAHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPC 780
              GR+MMGCLDETR LEYG+V VQ S  +            +   RFI+TG VVV KNPC
Sbjct: 721  SGGRSMMGCLDETRTLEYGQVVVQYSDPM------------RPGRRFIITGPVVVAKNPC 780

Query: 781  LHPGDVRVLTAVDVPSLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPK 840
            LHPGDVRVL AV+VP+L+HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD +L+PP+
Sbjct: 781  LHPGDVRVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPR 840

Query: 841  QVEPMDYTPVPSKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSKPC 900
              EPMDYTP P+++LDHD+T+EEV+EYFANY+VNDSLGIIANAHTAFADKE  KA S PC
Sbjct: 841  TSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPC 900

Query: 901  IELAKLFSIAVDFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDNIG 960
            IELAK FS AVDFPKTGV A+IP +L V+EYPDFM+K DK TY+S NV+GKLFR +    
Sbjct: 901  IELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERA 960

Query: 961  PNIKNIRSFTYTPEVARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYKIKTEA 1020
            P + +I+SFT   +VA ++YD DMEV+GFEEY+D+A Y K NYD +LGNLM YY IKTEA
Sbjct: 961  PPLISIKSFTL--DVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEA 1020

Query: 1021 ELINGGSLTSSLSFTMKNEAESIAMAVKSLRKEARGWFNEKADLHYGHDTNVYARASAWY 1080
            E+++GG +  S SFT + +AESI  AV++LRKE    FN   +     + N  A+ASAWY
Sbjct: 1021 EILSGGIMRMSKSFTKRRDAESIGRAVRALRKETLSLFNASEE-----EENESAKASAWY 1075

Query: 1081 FVTYHHTYWGWSDGRKNHGHFLSFPCC 1097
             VTYH +YWG  +   N  HFLSF  C
Sbjct: 1081 HVTYHSSYWGLYNEGLNRDHFLSFAWC 1075

[Close]
BLAST of HG10014758 vs. ExPASy Swiss-Prot
Match: Q0DXS3 (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2)

HSP 1 Score: 885.2 bits (2286), Expect = 8.1e-256
Identity = 444/724 (61.33%), Postives = 558/724 (77.07%), Query Frame = 0 

Query: 376  VYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEELDKMYSTELSPRASSSLEDGKTKIFK 435
            VYF GPE+NVSNRV+R +   + NFLR+SFVDE+ +K+ +T+LSPR++S  +  +T ++K
Sbjct: 9    VYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDANRTALYK 68

Query: 436  RILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTAARIRRWMGNFHGIRNVA 495
            R+LSVL DGITIG K FEFLA+SSSQLR+N+AWMFA R GL A+ IR WMG+F  IRNVA
Sbjct: 69   RVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRNVA 128

Query: 496  KYAARLGQSFGSSTETSSVSRREVNLIPDIEVESVGGVNYVFSDGIGKISDSFARKVAQK 555
            KYAARLGQSF SSTET  V + EV  I DI+     G  +VFSDGIGKIS +FA +VA K
Sbjct: 129  KYAARLGQSFSSSTETLKVQKYEVEEISDIK----NGTQHVFSDGIGKISSAFANEVAMK 188

Query: 556  CGI-RHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDTKLDVLSWSKYHPCF 615
            C + R  PSAFQIRY G+KGV++VDPTS  KLSLR SMLK++S +  +DVL++SKY P F
Sbjct: 189  CNLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPGF 248

Query: 616  LNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDPLKAQQALELMSPGENTKILKEMM 675
            LNRQLITLLSTLGV D VFE KQ+E +++L+ + +DP  A +A+ELM  GE T  +KE++
Sbjct: 249  LNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKELL 308

Query: 676  LCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFIPNGRAMMGCLDETRNLEYGEVFVQC 735
            LCGY+PD EP+L M+L TFR S+LLEL+ KSRI IP GRAMMGCLDETR L+YG+VF++ 
Sbjct: 309  LCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIRA 368

Query: 736  SAHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPCLHPGDVRVLTAVDVPSLHHMVDCVV 795
            ++ +   ND         N RF VTG VV+ KNPCLHPGD+R+L AVDVP LHHM +CVV
Sbjct: 369  TSGV---ND---------NDRFTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHHMFNCVV 428

Query: 796  FPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPKQVEPMDYTPVPSKLLDHDITMEEVQ 855
            FPQ+G RPHPNECSGSDLDGDIYFV WDP LIPP+ V PMDYTP P++ LDHD+T+EEV+
Sbjct: 429  FPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEVE 488

Query: 856  EYFANYMVNDSLGIIANAHTAFADKEAEKAMSKPCIELAKLFSIAVDFPKTGVPALIPAN 915
            EYF NY+VN+SLG+IANAH  FADKE  KA S PCIELAKLFSIAVDFPKTGVPALIP  
Sbjct: 489  EYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPE 548

Query: 916  LRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDNIGPNIKNIRSFTYTPEVARQAYDPDME 975
            L V+EYPDFM+K DKVTY+S  V+GKL+R +    P+IK+     +T EVAR++YD DM 
Sbjct: 549  LHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTPHIKH-----FTREVARRSYDTDMI 608

Query: 976  VEGFEEYLDDALYHKNNYDMRLGNLMHYYKIKTEAELINGGSLTSSLSFTMKNEAESIAM 1035
            V+G+E+Y+ +A+  K+ YD +LGNLM +Y IK+EAE+I+G  L  + +FT K++A++I +
Sbjct: 609  VDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRL 668

Query: 1036 AVKSLRKEARGWFNEKA--DLHYGHDTNVYARASAWYFVTYHHTYWGWSDGRKNHGHFLS 1095
            AV+SLRKEAR  F+E +  D  +GHD +  A+ASAWY VTYH  +WG  +      HF+S
Sbjct: 669  AVRSLRKEARSRFSEMSLDDNGHGHDAS-EAKASAWYHVTYHPEFWGCYNEGYERPHFIS 710

Query: 1096 FPCC 1097
            FP C
Sbjct: 729  FPWC 710

[Close]
BLAST of HG10014758 vs. ExPASy Swiss-Prot
Match: O82504 (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1)

HSP 1 Score: 724.2 bits (1868), Expect = 2.4e-207
Identity = 420/1115 (37.67%), Postives = 644/1115 (57.76%), Query Frame = 0 

Query: 4    TIQLFGFPRSVSQESVKTFVERFTGVGTIDAINTKRSKGRGR-RLYAIIQFTD-EEGAKS 63
            T+++   P+++  + +  F+E   G  T+ A+    ++   + R +A +QFT  E  +++
Sbjct: 11   TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRA 70

Query: 64   IISKATEGLFYGTSYLKATEWNHDILPDPLVFKYNFKGLKLNLGCQISKES-FSVLWTES 123
             +  +   L + T  L+ +E   DI+P P+  +     + L +G   S E  F  L    
Sbjct: 71   QLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEKWD 130

Query: 124  NVSVDFRFERRKLYFFISYPHVDYMLVLHYENIWQVELHKPQGQS--VDYLLIQLFGAPR 183
             V      E+R++ F++      Y + + +E+I +       G +  +D  L++L   P+
Sbjct: 131  GVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYGPK 190

Query: 184  IYERDAIS-SGHITEDPFLNFSMEIDTQWFRATDFTPSCCIGQSAALCLEIPYGRQLPNF 243
            +++R  +  +     D +     + D  W R TDF+ S  IG S   CLE+  G  + + 
Sbjct: 191  VFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTMLDI 250

Query: 244  HDKFAYFKEIKGKFTLVSGSTYSSNVNLVPVVRPP-LTINLPYAILFKINLLVQ-QGCLP 303
                 Y++E     T V G T++S   +VP++    L +  PY ILF++N LV  Q    
Sbjct: 251  FSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQKISL 310

Query: 304  GPALDISFYQMVDPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYF-KLKNPPQP 363
              A D+   +++       A +   LKKL      CY+P  ++  + +    K+K+ P  
Sbjct: 311  FAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSPAS 370

Query: 364  PILSLNE-GLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEELDKM 423
                L E  ++   R  VTP K+Y  GPE+  +N V++ + +++++F+RV+FV+E+  K+
Sbjct: 371  AYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSKL 430

Query: 424  YSTELSPRASSS--LEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFA 483
             +  LS  +     ++  +T I+ R+LS+L +GIT+G K+FEFLA+S+SQLR N+ WMFA
Sbjct: 431  PANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMFA 490

Query: 484  PRDGLTAARIRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESVG 543
              + + A  IR WMG F  IR+++K AAR+GQ F +S +T  V  ++V  IPDIEV +  
Sbjct: 491  SNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEV-TTD 550

Query: 544  GVNYVFSDGIGKISDSFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNS 603
            G +Y FSDGIGKIS +FA++VAQKCG+ H PSAFQIRY G+KGVI+VD +S  KLSLR+S
Sbjct: 551  GADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAVDRSSFRKLSLRDS 610

Query: 604  MLKYESTDTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDP 663
            MLK++S +  L+V  W++  PCFLNR++I LLSTLG+ED +FE+ Q   +  L  +  D 
Sbjct: 611  MLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLEDR 670

Query: 664  LKAQQALELMSPGENTK-ILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFIP 723
              A   L+ +S GEN+K +L +M+L GY P SEP+L MML    ES+L EL+ + RI +P
Sbjct: 671  DAALNVLQKLS-GENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVP 730

Query: 724  NGRAMMGCLDETRNLEYGEVFVQCS-AHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPC 783
             GR ++GC+DE   LEYG+V+V+ +    +L + +  + R       +V G VVV KNPC
Sbjct: 731  KGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPC 790

Query: 784  LHPGDVRVLTAVDVPSLHH--MVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIP 843
            LHPGD+RVL A+          +DC++FPQKG RPHPNECSG DLDGD +FV WD  +IP
Sbjct: 791  LHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIP 850

Query: 844  PKQVEPMDYTPVPSKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSK 903
             +   PMDY     +L+DHD+T+EE+ ++F +YM++D+LG+I+ AH   AD++ EKA S+
Sbjct: 851  SEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQ 910

Query: 904  PCIELAKLFSIAVDFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDN 963
             C+ELA L S AVDF KTG PA +P  L+ +E+PDF+++ +K TY S++V GKL+R + +
Sbjct: 911  KCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVKS 970

Query: 964  IGPNIKNIRSFTYTPEVARQ---AYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYK 1023
                 K        PE   +   AYD  +E  GFE +++ A  H++ Y  +L +LM YY 
Sbjct: 971  SLAQRK--------PEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYG 1030

Query: 1024 IKTEAELINGGSLTSSLSFTMKNE-----AESIAMAVKSLRKEARGWFNEKADLHYGHDT 1083
               E E++ G   T  +     N       + I ++VK L KEA GWF +  +     + 
Sbjct: 1031 AANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCE----DEQ 1090

Query: 1084 NVYARASAWYFVTYHHTYWGWSDGRKNHGHFLSFP 1095
                 ASAWY+VTY+  +      R     FLSFP
Sbjct: 1091 QKKKLASAWYYVTYNPNH------RDEKLTFLSFP 1103

[Close]
BLAST of HG10014758 vs. ExPASy Swiss-Prot
Match: Q7XM31 (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 2.4e-199
Identity = 407/1088 (37.41%), Postives = 615/1088 (56.53%), Query Frame = 0 

Query: 46   RLYAIIQFTDEEGAKSIISKATEG---LFYGTSYLKATEWNHDILPDPLVFKYNFKGLKL 105
            R +  +QF     A +    A+ G    F G + L  +    D+LP          G  L
Sbjct: 55   RGHGTVQFGSAAAAAAAAGLASSGRLPRFLG-ALLSVSPSPVDLLPRASDLSLRAAGAGL 114

Query: 106  NLGCQISKESFSVLWTESNVSVDFRFERRKLYFFISYPHVDYMLVLHYENIWQVELHKPQ 165
             +G ++++  F        V  +    +R++  ++ +    Y L + +E++         
Sbjct: 115  VVGDRVAERVFEAADAWDGVRAEVIPGKRRVDLYLEHDSQRYKLEVLFEDMKDCLGCTLD 174

Query: 166  GQSVDYLLIQLFGAPRIYERDAIS----SGHITEDPFLNFSMEIDTQWFRATDFTPSCCI 225
            G     +L+QL  APRI+   AIS    +    +D F     +    W RA DFTP+   
Sbjct: 175  GMGA--ILLQLNYAPRIH--TAISGPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSF 234

Query: 226  GQSAALCLEIPYGRQLPNFHDKFAYFKEIKGKFTLVSGSTYSSNVNLVPVVRPPLTINLP 285
            G+ + L L++     + +      +   + G+ T+ S     ++ N+VP+V  P   ++P
Sbjct: 235  GRCSTLVLKLGKSALVSDILKSLPFSGNL-GELTMNSMDGVGASSNVVPLVHCPRDYSVP 294

Query: 286  YAILFKINLLVQQGCLPGPALDISFYQMVDPQMYNIAFIDHALKKLLHLKECCYNPSKWL 345
            Y +LF++N L+  G +    ++   ++ +     +++      +K+  L+  CY P +++
Sbjct: 295  YEVLFRLNSLMHMGKIVAKHVNADLFKALQELPVDVS--RRIFEKMHKLESTCYGPLQFI 354

Query: 346  DEEYRKYFKLKNPPQPPILSLNEG-------LVYVHRVQVTPCKVYFCGPEVNVSNRVLR 405
             +E     +  N     +L  NEG       L+  +RV +TP K++  GPE  V+N V++
Sbjct: 355  QQEAYSMKRSHN-----VLLSNEGEGEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVK 414

Query: 406  RYPDYLNNFLRVSFVDEELDKMYSTELSPRASSSL--EDGKTKIFKRILSVLRDGITIGD 465
             +  Y ++F+RV+FVDE+  K+ S  +S R       +  KT ++ RILS+L+ G +IG 
Sbjct: 415  HHSAYASDFVRVTFVDEDWSKLSSNAISARIEQGFFSKPFKTGLYYRILSILKKGFSIGP 474

Query: 466  KKFEFLAYSSSQLRENAAWMFAPRDGLTAARIRRWMGNFHGIRNVAKYAARLGQSFGSST 525
            K FEFLA+S+SQLR N+ WMFA    L A  IRRWMG+F  IR+V+K AAR+GQ F SS 
Sbjct: 475  KNFEFLAFSASQLRGNSVWMFASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSR 534

Query: 526  ETSSVSRREVNLIPDIEVESVGGVNYVFSDGIGKISDSFARKVAQKCGIRHT--PSAFQI 585
            +T  V R +V +IPDIE+ +  G  Y+FSDGIGKIS  FA++VA   G+  T  PSAFQI
Sbjct: 535  QTFEVLRWDVEVIPDIEI-TTDGSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQI 594

Query: 586  RYAGFKGVISVDPTSSVKLSLRNSMLKYESTDTKLDVLSWSKYHPCFLNRQLITLLSTLG 645
            RY G+KGVI++DP SS+ LSLR SM K+ES    L++ SWSK  PC++NR++I+LLSTLG
Sbjct: 595  RYGGYKGVIAIDPMSSIDLSLRPSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLG 654

Query: 646  VEDHVFESKQKELIDELDTIFSDPLKAQQALELMSPGENTKILKEMMLCGYKPDSEPFLW 705
            + D +F + Q++ + E + + ++   A   L  +  G  TK   +M+L GY+P SEP+L 
Sbjct: 655  IRDEIFVAMQQDEMRETEEMLTNKEVALSVLGKLG-GSETKTAVKMLLQGYEPSSEPYLS 714

Query: 706  MMLHTFRESRLLELRRKSRIFIPNGRAMMGCLDETRNLEYGEVFVQCSAHLQLHND-NII 765
            M+L   +E+RL ++R + +I +P GR ++GCLDET  LEYG+V+++ + + +   D N  
Sbjct: 715  MILKAHQENRLTDIRTRCKIHVPKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQS 774

Query: 766  FKRSKSNPRFIVTGTVVVGKNPCLHPGDVRVLTAVDVPSLHHMVDCVVFPQKGSRPHPNE 825
            +  +       V G V + KNPCLHPGD+RVL A+  P L  MVDC+VFPQ+G RPHPNE
Sbjct: 775  YFYNDDGKTATVVGKVAITKNPCLHPGDIRVLEAIYDPDLVGMVDCLVFPQRGERPHPNE 834

Query: 826  CSGSDLDGDIYFVCWDPDLIPPKQVEPMDYTPVPSKLLDHDITMEEVQEYFANYMVNDSL 885
            CSG DLDGD+YF+ WD  LIP K   PMDYT    +++DH +T+EE+Q++F +YM+NDSL
Sbjct: 835  CSGGDLDGDLYFITWDDKLIPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSL 894

Query: 886  GIIANAHTAFADKEAEKAMSKPCIELAKLFSIAVDFPKTGVPALIPANLRVQEYPDFMDK 945
            G I+ AH   AD+   KA S  C++LA L S+AVDF KTG PA +P  LR +EYPDFM++
Sbjct: 895  GAISTAHLIHADRSPLKARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMER 954

Query: 946  ADKVTYKSDNVLGKLFRMLDNIGPNIKNIRSFTYTPEVARQAYDPDMEVEGFEEYLDDAL 1005
             +K  Y S+ VLGKL+R          +  + + +       YDPD+EV G +E+L  A 
Sbjct: 955  WEKPMYISNGVLGKLYRSAMGHMEKSGDSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAE 1014

Query: 1006 YHKNNYDMRLGNLMHYYKIKTEAELINGGSLTSSLSFTMKNE-----AESIAMAVKSLRK 1065
             +   Y+ +L  LM+YY+ + E E++ G      L     N+      + I  AV +L +
Sbjct: 1015 EYYELYEEKLTTLMNYYRAELEDEILTGNIRNKMLYLKRDNKRYFEMKDRIVAAVDALHR 1074

Query: 1066 EARGWFNEKADLHYGHDTNVYARASAWYFVTYHHTYWGWSDGRKNHGHFLSFP--CCPNV 1108
            EARGW      L    + +    ASAWY VTYH         R+    F SFP   C N+
Sbjct: 1075 EARGWL-----LSSRKEEDASRMASAWYRVTYH-------PDRRRGKRFWSFPWIACDNL 1115

[Close]
BLAST of HG10014758 vs. ExPASy Swiss-Prot
Match: Q9SG02 (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 1.0e-157
Identity = 385/1075 (35.81%), Postives = 562/1075 (52.28%), Query Frame = 0 

Query: 95   YNFKGLKLNLGCQISKESFSVLWTESNV---------SVDFRFERRKLYFF-----ISYP 154
            Y   G+ L +G  +S++ F V W    V         +  F F +   + F      +  
Sbjct: 130  YKLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVI 189

Query: 155  HVDYMLVLHYENIWQVELHKPQGQSVDYLLIQLFGAPRIYERDAISSGHITEDPFLNFSM 214
            + DY L L   +I  V  +K     V  L++QL  +PR++ R A    + T    L   +
Sbjct: 190  NCDYKLELLVRDIQTVRQYKTLHGFV--LILQLASSPRVWYRTADDDIYDTVPGDL---L 249

Query: 215  EIDTQWFRATDFTPSCCIGQ--SAALCLEIPYGRQLPNFHDKFAYFKEIKGKFTLVSGST 274
            + D  W R TDFT    IG+  S  + +   Y  +L    D   YF+  + +   V    
Sbjct: 250  DDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALD---YFRMRRVQEERV---R 309

Query: 275  YSSNVNLVPVVRPPLTIN---------LPYAILFKINLLVQQGCLPGPALDISFYQMV-- 334
            +   +   P    P++ +         + + I+F +N ++ +G      L   F+ ++  
Sbjct: 310  WPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRN 369

Query: 335  DPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILSLNEGLVYVH 394
             P+  NIA    +LK L   K   ++  K L  +  + +  KNP        +E +  + 
Sbjct: 370  QPKDVNIA----SLKHLCTYKRPVFDAYKRL--KLVQEWIQKNPKLLGSHEQSEDISEIR 429

Query: 395  RVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEELDKMYSTELS-------P 454
            R+ +TP + Y   PEV +SNRVLRRY      FLRV+F+DE +  + S  LS        
Sbjct: 430  RLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVK 489

Query: 455  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTAAR 514
              +SS    KT +FKR+ S+L DG  +  +K+ FLA+S++QLR+ +AW FA       + 
Sbjct: 490  DLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSD 549

Query: 515  IRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESVGGVNYVFSDG 574
            I+ WMG F   +NVAK AAR+G  F S+  T  V   EV    D EV  +    YVFSDG
Sbjct: 550  IKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEV----DTEVPDIERNGYVFSDG 609

Query: 575  IGKISDSFARKVAQ--KCGIRHTPSAFQIRYAGFKGVISVDPTSS--VKLSLRNSMLKYE 634
            IG I+   A +V +  K  + ++P A+QIRYAGFKGV++  P+ S  ++L+LR+SM K+ 
Sbjct: 610  IGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFF 669

Query: 635  STDTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDPLKAQQ 694
            S  T L++ SW+++ P FLNRQ+ITLLS LGV D +F   Q+ ++ +L+ I  D   A +
Sbjct: 670  SKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFE 729

Query: 695  ALELMSPGENTKILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFIPNGRAMM 754
             L   S  E       M+  G+KP +EP L  ML + R ++L  LR KSRIF+ +GR +M
Sbjct: 730  VL-TASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLM 789

Query: 755  GCLDETRNLEYGEVFVQCSAH-----LQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPCLH 814
            GCLDE   LE+G+ F+Q S          H     FK +K++   +V G V + KNPCLH
Sbjct: 790  GCLDEAGILEHGQCFIQVSKPSIENCFSKHGSR--FKETKTDLE-VVKGYVAIAKNPCLH 849

Query: 815  PGDVRVLTAVDVPSLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP--K 874
            PGDVR+L AVDVP LHHM DC++FPQKG RPH NE SGSDLDGD+YFV WD  LIPP  K
Sbjct: 850  PGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRK 909

Query: 875  QVEPMDYTPVPSKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSKPC 934
                M Y     K L   +  +++ ++FA  + N+ LG I NAH   AD+    AM + C
Sbjct: 910  SYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEEC 969

Query: 935  IELAKLFSIAVDFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDNIG 994
            + LA+L + AVDFPKTG    +P +L+ + YPDFM K D  TYKS+ +LG+L+R +  + 
Sbjct: 970  LLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVY 1029

Query: 995  PNIKNIRSFTYTPEVARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYKIKTEA 1054
                   S   T + +   YD  +E+ GFE+ + +A  HK  YD +L  L+  YK++ E 
Sbjct: 1030 DEDAEASSEEST-DPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEE 1089

Query: 1055 ELINGGSLTSSLSFTMKNEA---ESIAMAVKSLRKEARGWFNEKADLHYG---HDTNVY- 1112
            E++  G + S   +T K +    E +  +  SL+KE R  F E    H      + N+  
Sbjct: 1090 EIVT-GHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILY 1149

[Close]
BLAST of HG10014758 vs. ExPASy TrEMBL
Match: E9NWK7 (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G239640 PE=2 SV=1)

HSP 1 Score: 2063.5 bits (5345), Expect = 0.0e+00
Identity = 1005/1096 (91.70%), Postives = 1043/1096 (95.16%), Query Frame = 0 

Query: 1    MGKTIQLFGFPRSVSQESVKTFVERFTGVGTIDAINTKRSKGRGRRLYAIIQFTDEEGAK 60
            MGKTIQLFGFP  V QESVKTFVE  TG GTIDAINTKRSKG GRR+YAIIQFTDEEGAK
Sbjct: 1    MGKTIQLFGFPSGVLQESVKTFVEGITGTGTIDAINTKRSKGGGRRVYAIIQFTDEEGAK 60

Query: 61   SIISKATEGLFYGTSYLKATEWNHDILPDPLVFKYNFKGLKLNLGCQISKESFSVLWTES 120
            SIISKATE L YGTSYLKA E  HDILPDPLVF YNFK L+L+LGCQISKESFSVLWTES
Sbjct: 61   SIISKATERLCYGTSYLKAREMKHDILPDPLVFDYNFKALRLHLGCQISKESFSVLWTES 120

Query: 121  NVSVDFRFERRKLYFFISYPHVDYMLVLHYENIWQVELHKPQGQSVDYLLIQLFGAPRIY 180
            NVSVDF FE RKLYFFISYP VDYMLVL YENIWQVELHKP GQSVDYLLIQLFGAPRIY
Sbjct: 121  NVSVDFGFELRKLYFFISYPRVDYMLVLRYENIWQVELHKPHGQSVDYLLIQLFGAPRIY 180

Query: 181  ERDAISSGHITEDPFLNFSMEIDTQWFRATDFTPSCCIGQSAALCLEIPYGRQLPNFHDK 240
            ERDA S G ITEDPFLNFS EIDTQWFRATDFTPSC IGQSAALCLEIPYGRQLPNFHDK
Sbjct: 181  ERDARSFGLITEDPFLNFSTEIDTQWFRATDFTPSCSIGQSAALCLEIPYGRQLPNFHDK 240

Query: 241  FAYFKEIKGKFTLVSGSTYSSNVNLVPVVRPPLTINLPYAILFKINLLVQQGCLPGPALD 300
            FAYFKEIKGKFTLVSGSTYSSNVNLVPVV PP TINLPY ILFKINLLVQQGCLPGPALD
Sbjct: 241  FAYFKEIKGKFTLVSGSTYSSNVNLVPVVTPPRTINLPYTILFKINLLVQQGCLPGPALD 300

Query: 301  ISFYQMVDPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILSLN 360
            ISFYQMVD Q+YN A IDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPIL+LN
Sbjct: 301  ISFYQMVDSQIYNTAVIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILTLN 360

Query: 361  EGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEELDKMYSTELSP 420
            EGLVYVHRVQVTPCKVYFCGPEVN+SNRVLRRYPDY++NFLRVSFVDEEL KMYSTELSP
Sbjct: 361  EGLVYVHRVQVTPCKVYFCGPEVNISNRVLRRYPDYIDNFLRVSFVDEELGKMYSTELSP 420

Query: 421  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTAAR 480
            RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAP++ LTAA+
Sbjct: 421  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPKNELTAAK 480

Query: 481  IRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESVGGVNYVFSDG 540
            IR+WMG+FH IRNVAKYAARLGQSFGSSTET SVSRREV +IPDIEVES  GVNYVFSDG
Sbjct: 481  IRQWMGDFHNIRNVAKYAARLGQSFGSSTETLSVSRREVKVIPDIEVESGSGVNYVFSDG 540

Query: 541  IGKISDSFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600
            IGKI+ SFARKVA+KCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT
Sbjct: 541  IGKIAASFARKVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600

Query: 601  KLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDPLKAQQALEL 660
            KLDVLSWSKYHPCFLNRQLITLLSTLGV+DHVFESKQ+ELIDELDTIFSDPLKAQQALEL
Sbjct: 601  KLDVLSWSKYHPCFLNRQLITLLSTLGVQDHVFESKQQELIDELDTIFSDPLKAQQALEL 660

Query: 661  MSPGENTKILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFIPNGRAMMGCLD 720
            MSPGENTKILKEMMLCGYKPDSEPFL MMLHTFRES+L+ELR KSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTKILKEMMLCGYKPDSEPFLRMMLHTFRESKLMELRMKSRIFIPNGRAMMGCLD 720

Query: 721  ETRNLEYGEVFVQCSAHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPCLHPGDVRVLTA 780
            ETRNLEYGEVFVQCSAH QLH+D +IFKR KSN  FIVTGTVVV KNPCLHPGDVRVLTA
Sbjct: 721  ETRNLEYGEVFVQCSAHQQLHDDRVIFKRIKSNRHFIVTGTVVVAKNPCLHPGDVRVLTA 780

Query: 781  VDVPSLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPKQVEPMDYTPVP 840
            VDVPSLHHM+DCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP+QVEPMDYTPVP
Sbjct: 781  VDVPSLHHMIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVP 840

Query: 841  SKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSKPCIELAKLFSIAV 900
            S++LDHD+TMEEVQEYFANYMVNDSLGIIANAHTAFADKE +KAMS PCI+LAKLFSIAV
Sbjct: 841  SQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAV 900

Query: 901  DFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDNIGPNIKNIRSFTY 960
            DFPKTGVPALIPANLRV+EYPDFMDKADKVTY+S+NVLGKLFRMLD+IGPNIKNIRSF Y
Sbjct: 901  DFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNY 960

Query: 961  TPEVARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYKIKTEAELINGGSLTSS 1020
            TPE+ARQ YDPDMEVEGFEEYLDDA+YHKNNYDMRLGNLMHY+KIKTEAELI+GGSLTSS
Sbjct: 961  TPEMARQDYDPDMEVEGFEEYLDDAIYHKNNYDMRLGNLMHYHKIKTEAELISGGSLTSS 1020

Query: 1021 LSFTMKNEAESIAMAVKSLRKEARGWFNEKADLHYGHDTNVYARASAWYFVTYHHTYWGW 1080
            LSFTMKNEAESI +AVKSLRKEARGWFNEKADLHYGH TNVYARASAWYFVTYHHTYWGW
Sbjct: 1021 LSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGW 1080

Query: 1081 SDGRKNHGHFLSFPCC 1097
            SDGRKNHGHFLSFP C
Sbjct: 1081 SDGRKNHGHFLSFPWC 1096

[Close]
BLAST of HG10014758 vs. ExPASy TrEMBL
Match: A0A0S1YCZ7 (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=RDR1b PE=2 SV=1)

HSP 1 Score: 2055.0 bits (5323), Expect = 0.0e+00
Identity = 1002/1096 (91.42%), Postives = 1040/1096 (94.89%), Query Frame = 0 

Query: 1    MGKTIQLFGFPRSVSQESVKTFVERFTGVGTIDAINTKRSKGRGRRLYAIIQFTDEEGAK 60
            MGKTIQLFGFP  V QESVKTFVE  TG GTIDAINTKRSKG GRR+YAIIQFTDEEGAK
Sbjct: 1    MGKTIQLFGFPSGVLQESVKTFVEGITGTGTIDAINTKRSKGGGRRVYAIIQFTDEEGAK 60

Query: 61   SIISKATEGLFYGTSYLKATEWNHDILPDPLVFKYNFKGLKLNLGCQISKESFSVLWTES 120
            SIISKATE L YGTSYLKA E  HDILPDPLVF YNFK L+L+LGCQISKESFSVLWTES
Sbjct: 61   SIISKATERLCYGTSYLKAREMKHDILPDPLVFDYNFKALRLHLGCQISKESFSVLWTES 120

Query: 121  NVSVDFRFERRKLYFFISYPHVDYMLVLHYENIWQVELHKPQGQSVDYLLIQLFGAPRIY 180
            NVSVDF FE RKLYFFISYP VDYMLVL YENIWQVELHKP GQSVDYLLIQLFGAPRIY
Sbjct: 121  NVSVDFGFELRKLYFFISYPRVDYMLVLRYENIWQVELHKPHGQSVDYLLIQLFGAPRIY 180

Query: 181  ERDAISSGHITEDPFLNFSMEIDTQWFRATDFTPSCCIGQSAALCLEIPYGRQLPNFHDK 240
            ERDA S G ITEDPFLNFS EIDTQWFRATDFTPSC IGQSAALCLEIPYGRQLPNFHDK
Sbjct: 181  ERDARSFGLITEDPFLNFSTEIDTQWFRATDFTPSCSIGQSAALCLEIPYGRQLPNFHDK 240

Query: 241  FAYFKEIKGKFTLVSGSTYSSNVNLVPVVRPPLTINLPYAILFKINLLVQQGCLPGPALD 300
            FAYFKEIKGKFTLVSGSTYSSNVNLVPVV PP TINLPY ILFKINLLVQQGCLPGPALD
Sbjct: 241  FAYFKEIKGKFTLVSGSTYSSNVNLVPVVTPPRTINLPYTILFKINLLVQQGCLPGPALD 300

Query: 301  ISFYQMVDPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILSLN 360
            ISFYQMVD Q+YN A IDHALKKLLHLKECCYNPS WLDEEYRKYFKLKNPPQPPIL+LN
Sbjct: 301  ISFYQMVDSQIYNTAVIDHALKKLLHLKECCYNPSIWLDEEYRKYFKLKNPPQPPILTLN 360

Query: 361  EGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEELDKMYSTELSP 420
            EGLVYVHRVQVTPCKVYFCGPEVN+SNRVLRR PDY++NFLRVSFVDEEL KMYSTELSP
Sbjct: 361  EGLVYVHRVQVTPCKVYFCGPEVNISNRVLRRCPDYIDNFLRVSFVDEELGKMYSTELSP 420

Query: 421  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTAAR 480
            RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAP++ LTAA+
Sbjct: 421  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPKNELTAAK 480

Query: 481  IRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESVGGVNYVFSDG 540
            IR+WMG+FH IRNVAKYAARLGQSFGSSTET SVSRREV +IPDIEVES  GVNYVFSDG
Sbjct: 481  IRQWMGDFHNIRNVAKYAARLGQSFGSSTETLSVSRREVKVIPDIEVESGSGVNYVFSDG 540

Query: 541  IGKISDSFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600
            IGKI+ SFARKVA+KCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT
Sbjct: 541  IGKIAASFARKVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600

Query: 601  KLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDPLKAQQALEL 660
            KLDVLSWSKYHPCFLNRQLIT LSTLGV+DHVFESKQ+ELIDELDTIFSDPLKAQQALEL
Sbjct: 601  KLDVLSWSKYHPCFLNRQLITFLSTLGVQDHVFESKQQELIDELDTIFSDPLKAQQALEL 660

Query: 661  MSPGENTKILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFIPNGRAMMGCLD 720
            MSPGENTKILKEMMLCGYKPDSEPFL MMLHTFRES+L+ELR KSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTKILKEMMLCGYKPDSEPFLRMMLHTFRESKLMELRMKSRIFIPNGRAMMGCLD 720

Query: 721  ETRNLEYGEVFVQCSAHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPCLHPGDVRVLTA 780
            ETRNLEYGEVFVQCSAH QLH+D +IFKR KSN  FIVTGTVVV KNPCLHPGDVRVLTA
Sbjct: 721  ETRNLEYGEVFVQCSAHQQLHDDRVIFKRIKSNRHFIVTGTVVVAKNPCLHPGDVRVLTA 780

Query: 781  VDVPSLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPKQVEPMDYTPVP 840
            VDVPSLHHM+DCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP+QVEPMDYTPVP
Sbjct: 781  VDVPSLHHMIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVP 840

Query: 841  SKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSKPCIELAKLFSIAV 900
            S++LDHD+TMEEVQEYFANYMVNDSLGIIANAHTAFADKE +KAMS PCI+LAKLFSIAV
Sbjct: 841  SQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAV 900

Query: 901  DFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDNIGPNIKNIRSFTY 960
            DFPKTGVPALIPANLRV+EYPDFMDKADKVTY+S+NVLGKLFRMLD+IGPNIKNIRSF Y
Sbjct: 901  DFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNY 960

Query: 961  TPEVARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYKIKTEAELINGGSLTSS 1020
            TPE+ARQ YDPDMEVEGFEEYLDDA+YHKNNYDMRLGNLMHY+KIKTEAELI+GGSLTSS
Sbjct: 961  TPEMARQDYDPDMEVEGFEEYLDDAIYHKNNYDMRLGNLMHYHKIKTEAELISGGSLTSS 1020

Query: 1021 LSFTMKNEAESIAMAVKSLRKEARGWFNEKADLHYGHDTNVYARASAWYFVTYHHTYWGW 1080
            LSFTMKNEAESI +AVKSLRKEARGWFNEKADLHYGH TNVYARASAWYFVTYHHTYWGW
Sbjct: 1021 LSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGW 1080

Query: 1081 SDGRKNHGHFLSFPCC 1097
            SDGRKNHGHFLSFP C
Sbjct: 1081 SDGRKNHGHFLSFPRC 1096

[Close]
BLAST of HG10014758 vs. ExPASy TrEMBL
Match: H3K3Y9 (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=RDR1 PE=2 SV=1)

HSP 1 Score: 2051.2 bits (5313), Expect = 0.0e+00
Identity = 1000/1096 (91.24%), Postives = 1039/1096 (94.80%), Query Frame = 0 

Query: 1    MGKTIQLFGFPRSVSQESVKTFVERFTGVGTIDAINTKRSKGRGRRLYAIIQFTDEEGAK 60
            MGKTIQLFGFP  V QESVKTFVE  TG GTIDAINTKRSKG GRR+YAIIQFTDEEGAK
Sbjct: 1    MGKTIQLFGFPSGVLQESVKTFVEGITGTGTIDAINTKRSKGGGRRVYAIIQFTDEEGAK 60

Query: 61   SIISKATEGLFYGTSYLKATEWNHDILPDPLVFKYNFKGLKLNLGCQISKESFSVLWTES 120
            SIISKATE L YGTSYLKA E  HDILPDPLVF YNFK L+L+LGCQISKESFSVLWTES
Sbjct: 61   SIISKATERLCYGTSYLKAREMKHDILPDPLVFDYNFKALRLHLGCQISKESFSVLWTES 120

Query: 121  NVSVDFRFERRKLYFFISYPHVDYMLVLHYENIWQVELHKPQGQSVDYLLIQLFGAPRIY 180
            NVSVDF F+ RKLYFFISYP VDYMLVL YENIWQVELHKP GQSVDYLLIQLFGAPRIY
Sbjct: 121  NVSVDFGFDVRKLYFFISYPRVDYMLVLRYENIWQVELHKPHGQSVDYLLIQLFGAPRIY 180

Query: 181  ERDAISSGHITEDPFLNFSMEIDTQWFRATDFTPSCCIGQSAALCLEIPYGRQLPNFHDK 240
            ERDA S G ITEDPFLNFS EIDTQWFRATDFTPSC IGQSAALCLEI YGRQLPNFHDK
Sbjct: 181  ERDARSFGLITEDPFLNFSTEIDTQWFRATDFTPSCSIGQSAALCLEILYGRQLPNFHDK 240

Query: 241  FAYFKEIKGKFTLVSGSTYSSNVNLVPVVRPPLTINLPYAILFKINLLVQQGCLPGPALD 300
            FAYFKEIKGKFTLVSGSTYSSNVNLVPVV PP TINLPY ILFKINLLVQQGCLPGPALD
Sbjct: 241  FAYFKEIKGKFTLVSGSTYSSNVNLVPVVTPPRTINLPYTILFKINLLVQQGCLPGPALD 300

Query: 301  ISFYQMVDPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILSLN 360
            ISFYQMVD Q+YN A IDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPIL+LN
Sbjct: 301  ISFYQMVDSQIYNTAVIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILTLN 360

Query: 361  EGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEELDKMYSTELSP 420
            EGLVYVHRVQVTPCKVYFCGPEVN+SNRVLRRYPDY++NFLRVSFVDEEL KMYSTELSP
Sbjct: 361  EGLVYVHRVQVTPCKVYFCGPEVNISNRVLRRYPDYIDNFLRVSFVDEELGKMYSTELSP 420

Query: 421  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTAAR 480
            RASSSLEDGKTKI KRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAP++ LTAA+
Sbjct: 421  RASSSLEDGKTKILKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPKNELTAAK 480

Query: 481  IRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESVGGVNYVFSDG 540
            IR+WMG+FH IRNVAKYAARLGQ FGSSTET SVSRREV +IPDIEVES  GVNYVFSDG
Sbjct: 481  IRQWMGDFHNIRNVAKYAARLGQPFGSSTETLSVSRREVKVIPDIEVESGSGVNYVFSDG 540

Query: 541  IGKISDSFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600
            IGKI+ SFARKVA+KCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT
Sbjct: 541  IGKIAASFARKVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600

Query: 601  KLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDPLKAQQALEL 660
            KLDVLSWSKYHPCFLNRQLITLLSTLGV+DHVFESKQ+ELIDELDTIFSDPLKAQQALEL
Sbjct: 601  KLDVLSWSKYHPCFLNRQLITLLSTLGVQDHVFESKQQELIDELDTIFSDPLKAQQALEL 660

Query: 661  MSPGENTKILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFIPNGRAMMGCLD 720
            MSPGENTKILKEMMLCGYKPDSEPFL MMLHTFRES+L+ELR KSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTKILKEMMLCGYKPDSEPFLRMMLHTFRESKLMELRMKSRIFIPNGRAMMGCLD 720

Query: 721  ETRNLEYGEVFVQCSAHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPCLHPGDVRVLTA 780
            ETRNLEYGEVF QCSAH QLH+D +IFKR KSN  FIVTGTVVV KNPCLHPGDVRVLTA
Sbjct: 721  ETRNLEYGEVFWQCSAHQQLHDDRVIFKRIKSNRHFIVTGTVVVAKNPCLHPGDVRVLTA 780

Query: 781  VDVPSLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPKQVEPMDYTPVP 840
            VDVPSLHHM+DCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP+QVEPMDYTPVP
Sbjct: 781  VDVPSLHHMIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVP 840

Query: 841  SKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSKPCIELAKLFSIAV 900
            S++LDHD+TMEEVQEYFANYMVNDSLGIIANAHTAFADKE +KAMS PCI+LAKLFSIAV
Sbjct: 841  SQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAV 900

Query: 901  DFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDNIGPNIKNIRSFTY 960
            DFPKTGVPALIPANLRV+EYPDFMDKADKVTY+S+NVLGKLFRMLD+IGPNIKNIRSF Y
Sbjct: 901  DFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNY 960

Query: 961  TPEVARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYKIKTEAELINGGSLTSS 1020
            TPE+ARQ YDPDMEVEGFEEYLDDA+YHKNNYDMRLGNLMHY+KIKTEAELI+GGSLTSS
Sbjct: 961  TPEMARQDYDPDMEVEGFEEYLDDAIYHKNNYDMRLGNLMHYHKIKTEAELISGGSLTSS 1020

Query: 1021 LSFTMKNEAESIAMAVKSLRKEARGWFNEKADLHYGHDTNVYARASAWYFVTYHHTYWGW 1080
            LSFTMKNEAESI +AVKSLRKEARGWFNEKADLHYGH TNVYARASAWYFVTYHHTYWGW
Sbjct: 1021 LSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGW 1080

Query: 1081 SDGRKNHGHFLSFPCC 1097
            SDGRKNHGHFLSFP C
Sbjct: 1081 SDGRKNHGHFLSFPWC 1096

[Close]
BLAST of HG10014758 vs. ExPASy TrEMBL
Match: A0A6J1FR02 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447986 PE=3 SV=1)

HSP 1 Score: 1922.1 bits (4978), Expect = 0.0e+00
Identity = 936/1096 (85.40%), Postives = 1004/1096 (91.61%), Query Frame = 0 

Query: 1    MGKTIQLFGFPRSVSQESVKTFVERFTGVGTIDAINTKRSKGRGRRLYAIIQFTDEEGAK 60
            MGKTIQL+GFP  V QESVK FVERFTG G+IDAIN KRS+GRG+RLYAIIQF D+ GAK
Sbjct: 1    MGKTIQLYGFPSGVLQESVKAFVERFTGEGSIDAINVKRSRGRGKRLYAIIQFIDDVGAK 60

Query: 61   SIISKATEGLFYGTSYLKATEWNHDILPDPLVFKYNFKGLKLNLGCQISKESFSVLWTES 120
             IIS A   L YGTSYLKA EW  DIL DPLVF+YNFKGL+L+LGCQIS+E F VLW ES
Sbjct: 61   LIISLANASLRYGTSYLKAREWKQDILQDPLVFEYNFKGLELHLGCQISREEFFVLWRES 120

Query: 121  NVSVDFRFERRKLYFFISYPHVDYMLVLHYENIWQVELHKPQGQSVDYLLIQLFGAPRIY 180
            NVSV+F FERR L FFIS+P VDYMLVL YENIWQVELHKPQGQS+DYLLIQL GAPRIY
Sbjct: 121  NVSVNFEFERRDLKFFISHPRVDYMLVLRYENIWQVELHKPQGQSIDYLLIQLVGAPRIY 180

Query: 181  ERDAISSGHITEDPFLNFSMEIDTQWFRATDFTPSCCIGQSAALCLEIPYGRQLPNFHDK 240
            ERD    GHI+EDPFL+FS E+DT+WFRATDFTPSCCIGQS ALCLEIPYGR LPNFHDK
Sbjct: 181  ERDTKLFGHISEDPFLSFSKEMDTKWFRATDFTPSCCIGQSGALCLEIPYGRLLPNFHDK 240

Query: 241  FAYFKEIKGKFTLVSGSTYSSNVNLVPVVRPPLTINLPYAILFKINLLVQQGCLPGPALD 300
            FAYF EIKGKFTL SGSTYSSNVNLVPVVRPPL+I+LPYAILFKINLLVQQGCLPGP+LD
Sbjct: 241  FAYFNEIKGKFTLASGSTYSSNVNLVPVVRPPLSIHLPYAILFKINLLVQQGCLPGPSLD 300

Query: 301  ISFYQMVDPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILSLN 360
            ISFY+MVDPQ++NIAFID AL+KL  LKECCYNPSKWL EEYRKY KL NPPQPP LSL+
Sbjct: 301  ISFYEMVDPQIHNIAFIDRALRKLYDLKECCYNPSKWLGEEYRKYSKLTNPPQPPNLSLD 360

Query: 361  EGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEELDKMYSTELSP 420
            EGLVYVHRVQVTPC+VYFCGPEVNVSNRVLRRYP+YL+NFLRVSFVDEELDK+YSTELSP
Sbjct: 361  EGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTELSP 420

Query: 421  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTAAR 480
            R SSSLEDGKTKIFKRILSVL+DGITIGDKKFEFLAYSSSQLRENA WMFAPRDG+TAA+
Sbjct: 421  RESSSLEDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSSQLRENAVWMFAPRDGITAAK 480

Query: 481  IRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESVGGVNYVFSDG 540
            IR+WMG+FH IRNVAKYAARLGQSFGSSTET+SVSRREV +IPDIEV+S  G+NYVFSDG
Sbjct: 481  IRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVKVIPDIEVKSDAGINYVFSDG 540

Query: 541  IGKISDSFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600
            IGKIS SFAR+VA+KC IRHTPSAFQIRYAGFKGVISVDPTS VKLSLRNSMLKYESTDT
Sbjct: 541  IGKISASFAREVARKCHIRHTPSAFQIRYAGFKGVISVDPTSFVKLSLRNSMLKYESTDT 600

Query: 601  KLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDPLKAQQALEL 660
            KLDVLSWS+YHPC+LNRQLITLLSTLGV+D +FESKQKELID+LDTIF DPLKAQQALEL
Sbjct: 601  KLDVLSWSRYHPCYLNRQLITLLSTLGVQDDIFESKQKELIDQLDTIFMDPLKAQQALEL 660

Query: 661  MSPGENTKILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFIPNGRAMMGCLD 720
            MSPGENT ILKE++ CGY+PDSEPFL+MMLHTFRES+LLELRRKSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTNILKEIISCGYRPDSEPFLYMMLHTFRESKLLELRRKSRIFIPNGRAMMGCLD 720

Query: 721  ETRNLEYGEVFVQCSAHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPCLHPGDVRVLTA 780
            ET NLEYGEVFVQCSAH QLHND+IIFKRSKSN  FIVTGTVVV KNPCLHPGDVRVLTA
Sbjct: 721  ETGNLEYGEVFVQCSAHQQLHNDHIIFKRSKSNQHFIVTGTVVVAKNPCLHPGDVRVLTA 780

Query: 781  VDVPSLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPKQVEPMDYTPVP 840
            VDVPSLHHMVDC+VFPQKG RPHPNECSGSDLDGDIYFVCWDPDLIPP+QVEPMDYTPVP
Sbjct: 781  VDVPSLHHMVDCLVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVP 840

Query: 841  SKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSKPCIELAKLFSIAV 900
            S+LLDHD+TMEEVQEYFANYMVNDSLGIIANAHTAFAD   EKAMS+PCI+LAKLFSIAV
Sbjct: 841  SRLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADSRPEKAMSEPCIKLAKLFSIAV 900

Query: 901  DFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDNIGPNIKNIRSFTY 960
            DFPKTGVPALI A+LRVQ YPDFMDK DK +YKS NVLGKLFRMLD+I P I +I+S  +
Sbjct: 901  DFPKTGVPALISADLRVQVYPDFMDKPDKQSYKSHNVLGKLFRMLDDIEPRI-SIKSVKF 960

Query: 961  TPEVARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYKIKTEAELINGGSLTSS 1020
            T E+ARQAYDPDMEV+GFEEYLDDALYHKNNYDMRLGNLM YYKIKTEAELI+G SLT S
Sbjct: 961  TREIARQAYDPDMEVKGFEEYLDDALYHKNNYDMRLGNLMKYYKIKTEAELISGVSLTKS 1020

Query: 1021 LSFTMKNEAESIAMAVKSLRKEARGWFNEKADLHYGHDTNVYARASAWYFVTYHHTYWGW 1080
             SFT KNEAESI MAVKSLRKEARGWFNE A LH+GHD N YARASAWYFVTYH++YWGW
Sbjct: 1021 SSFTKKNEAESIIMAVKSLRKEARGWFNENAGLHFGHDNNAYARASAWYFVTYHYSYWGW 1080

Query: 1081 SDGRKNHGHFLSFPCC 1097
              G KN  HFLSFP C
Sbjct: 1081 Y-GEKNESHFLSFPWC 1094

[Close]
BLAST of HG10014758 vs. ExPASy TrEMBL
Match: A0A6J1K2Q9 (RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111490531 PE=3 SV=1)

HSP 1 Score: 1907.1 bits (4939), Expect = 0.0e+00
Identity = 932/1096 (85.04%), Postives = 1000/1096 (91.24%), Query Frame = 0 

Query: 1    MGKTIQLFGFPRSVSQESVKTFVERFTGVGTIDAINTKRSKGRGRRLYAIIQFTDEEGAK 60
            MGKTIQL+GFP  V QESVK FVERFTG G+IDAIN KRS+GRG+RLYAIIQF D+ GAK
Sbjct: 1    MGKTIQLYGFPSGVLQESVKAFVERFTGEGSIDAINVKRSRGRGKRLYAIIQFIDDVGAK 60

Query: 61   SIISKATEGLFYGTSYLKATEWNHDILPDPLVFKYNFKGLKLNLGCQISKESFSVLWTES 120
             IIS A   L YGTS LKA EW  DIL DPLVF+YNFKGL+L+LGCQIS+E F VLWTES
Sbjct: 61   LIISLANASLRYGTSSLKAREWKQDILQDPLVFEYNFKGLELHLGCQISREEFFVLWTES 120

Query: 121  NVSVDFRFERRKLYFFISYPHVDYMLVLHYENIWQVELHKPQGQSVDYLLIQLFGAPRIY 180
            NVSV+F FERR L FFIS+P VDYMLVL YENIWQVELHKP GQS+DYLLIQL GAPRIY
Sbjct: 121  NVSVNFEFERRDLKFFISHPLVDYMLVLRYENIWQVELHKPPGQSIDYLLIQLVGAPRIY 180

Query: 181  ERDAISSGHITEDPFLNFSMEIDTQWFRATDFTPSCCIGQSAALCLEIPYGRQLPNFHDK 240
            ERD    GHI+EDPFL+FS E+DT+WFRATDFTPSCCIGQS ALCLEIPYGRQLPNFHDK
Sbjct: 181  ERDTKLFGHISEDPFLSFSKEMDTEWFRATDFTPSCCIGQSGALCLEIPYGRQLPNFHDK 240

Query: 241  FAYFKEIKGKFTLVSGSTYSSNVNLVPVVRPPLTINLPYAILFKINLLVQQGCLPGPALD 300
            FAYFKEIKGKFTL +GSTYSSNVNLVPVVRPPL+I+LPYAILFKINLLVQQGCLPGPALD
Sbjct: 241  FAYFKEIKGKFTLATGSTYSSNVNLVPVVRPPLSIHLPYAILFKINLLVQQGCLPGPALD 300

Query: 301  ISFYQMVDPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILSLN 360
            ISFY+MVDPQ++NIAFID AL+KL  LKECCYNPSKWL EEYRKY KL NPPQPP LSL+
Sbjct: 301  ISFYEMVDPQIHNIAFIDRALRKLYDLKECCYNPSKWLGEEYRKYSKLTNPPQPPNLSLD 360

Query: 361  EGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEELDKMYSTELSP 420
            EGLVYVHRVQVTPC+VYFCGPEVNVSNRVLRRYP+YL+NFLRVSFVDEELD++YSTELSP
Sbjct: 361  EGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDRLYSTELSP 420

Query: 421  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTAAR 480
            R SSSL DGKTKIFKRILSVL+DGITIGDKKFEFLAYSSSQLRENA WMFAPRDG+TAA+
Sbjct: 421  RESSSLGDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSSQLRENAVWMFAPRDGITAAK 480

Query: 481  IRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESVGGVNYVFSDG 540
            IR+WMG+FH IRNVAKYAARLGQSFGSSTET+SVSRREV +IPDIEVES  G+NYVFSDG
Sbjct: 481  IRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVESDAGINYVFSDG 540

Query: 541  IGKISDSFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDT 600
            IGKIS SFAR+VA+KC IRHTPSAFQIRYAGFKGVISVDPTS VKLSLRNSMLKYESTD 
Sbjct: 541  IGKISASFAREVARKCRIRHTPSAFQIRYAGFKGVISVDPTSFVKLSLRNSMLKYESTDM 600

Query: 601  KLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDPLKAQQALEL 660
            KLDVLSWS+YHPC+LNRQLITLLSTLGV+D +FESKQKELID+LDTIF +PLKAQQALEL
Sbjct: 601  KLDVLSWSRYHPCYLNRQLITLLSTLGVQDDIFESKQKELIDQLDTIFMNPLKAQQALEL 660

Query: 661  MSPGENTKILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFIPNGRAMMGCLD 720
            MSPGENT ILKE++ CGY+PDSEPFL+MMLHTFRES+LLELRRKSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTNILKEIISCGYRPDSEPFLYMMLHTFRESKLLELRRKSRIFIPNGRAMMGCLD 720

Query: 721  ETRNLEYGEVFVQCSAHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPCLHPGDVRVLTA 780
            ET NLEYGEVFVQCSAH QLHND+IIFKRSKSN  FIVTGTVVV KNPCLHPGDVRVLTA
Sbjct: 721  ETGNLEYGEVFVQCSAHQQLHNDHIIFKRSKSNQHFIVTGTVVVAKNPCLHPGDVRVLTA 780

Query: 781  VDVPSLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPKQVEPMDYTPVP 840
            VDVP+LHHMVDC+VFPQKG RPHPNECSGSDLDGDIYFVCWDPDLIP +QVEPMDYTPV 
Sbjct: 781  VDVPALHHMVDCLVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPHQQVEPMDYTPVL 840

Query: 841  SKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSKPCIELAKLFSIAV 900
            S+LLDHD+TMEEVQEYFANYMVNDSLGIIANAHTAFAD   EKAMS+PCI+LAKLFSIAV
Sbjct: 841  SRLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADSWPEKAMSEPCIKLAKLFSIAV 900

Query: 901  DFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDNIGPNIKNIRSFTY 960
            DFPKTGVPALI A+LRVQ YPDFMDK DK  YKS NVLGKLFRMLD+I P I +I+S  +
Sbjct: 901  DFPKTGVPALISADLRVQVYPDFMDKPDKQRYKSHNVLGKLFRMLDDIEPRI-SIKSVKF 960

Query: 961  TPEVARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYKIKTEAELINGGSLTSS 1020
            T E+ARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLM YYKIKTEAELI+G SLT S
Sbjct: 961  TREIARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMKYYKIKTEAELISGVSLTKS 1020

Query: 1021 LSFTMKNEAESIAMAVKSLRKEARGWFNEKADLHYGHDTNVYARASAWYFVTYHHTYWGW 1080
             SFT KNEAESI MAVKSLRKEARGWFNE A LH+GHD N YARASAWYFVTYH++YWGW
Sbjct: 1021 SSFTKKNEAESIIMAVKSLRKEARGWFNENAGLHFGHDNNAYARASAWYFVTYHYSYWGW 1080

Query: 1081 SDGRKNHGHFLSFPCC 1097
              G KN  HFLSFP C
Sbjct: 1081 F-GEKNESHFLSFPWC 1094

[Close]
BLAST of HG10014758 vs. TAIR 10
Match: AT1G14790.1 (RNA-dependent RNA polymerase 1 )

HSP 1 Score: 1323.1 bits (3423), Expect = 0.0e+00
Identity = 668/1107 (60.34%), Postives = 818/1107 (73.89%), Query Frame = 0 

Query: 1    MGKTIQLFGFPRSVSQESVKTFVERFTGVGTIDAINTKRSKGRGRRLYAIIQFTDEEGAK 60
            MGKTIQ+FGFP  VS E VK F+ER TG GT+ AI  ++ K  G R+YAI+QFT E   +
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60

Query: 61   SIISKATEGLFYGTSYLKATEWNHDILPDPLVFKYNFKGLKLNLGCQISKESFSVLWTES 120
             II+ A E L+YG SYLKA E   DI+P P    +   GLK+  GCQ+S + F  LW+  
Sbjct: 61   LIITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQ 120

Query: 121  NVSVDFRFERRKLYFFISYPHVDYMLVLHYENIWQVELHKPQGQSVDYLLIQLFGAPRIY 180
            +V V F    RKL+F  S+   DY L L YENIWQ++LH PQG+S  +L+IQ+ GAP+I+
Sbjct: 121  DVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIF 180

Query: 181  ERDAISSGHITEDPFLN--------FSMEIDTQWFRATDFTPSCCIGQSAALCLEIPYGR 240
            E+         ED  +N        +S   D QW R TDFT S CIGQS A CLE+P   
Sbjct: 181  EK---------EDQPINLLFGIMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHL 240

Query: 241  QLPNFHDKFAYFKEIK-GKFTLVSGSTYSSNVN-LVPVVRPPLTINLPYAILFKINLLVQ 300
             +P+F + FA + E +   F + SGS+YSSN N LVPVV PP   +LP+ ILFK+N LVQ
Sbjct: 241  NVPDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQ 300

Query: 301  QGCLPGPALDISFYQMVDPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKN 360
              CL GPALD+ FY++++ + Y+ A IDH L+KL HL ECCY P+ WL +EY+K+     
Sbjct: 301  NACLSGPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGK 360

Query: 361  PPQPPILSLNEGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEEL 420
             P  P +SL++GLVY++RVQVTP +VYF GPEVNVSNRVLR Y  Y+NNFLRVSFVDE+L
Sbjct: 361  LPLSPTISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDL 420

Query: 421  DKMYSTELSPRASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMF 480
            +K+ S +LSPR+S+     +TK++ RI SVLRDGI IGDKKFEFLA+SSSQLREN+AWMF
Sbjct: 421  EKVRSMDLSPRSST---QRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMF 480

Query: 481  APRDGLTAARIRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESV 540
            AP D +TAA IR WMG+F  IRNVAKYAARLGQSF SS ET +V   E+ +IPD+E+ S+
Sbjct: 481  APIDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISL 540

Query: 541  GGVNYVFSDGIGKISDSFARKVAQKCGI-RHTPSAFQIRYAGFKGVISVDPTSSVKLSLR 600
             G  YVFSDGIGKIS  FARKVA+KCG+   +PSAFQIRY G+KGV++VDP SS KLSLR
Sbjct: 541  -GTRYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLR 600

Query: 601  NSMLKYESTDTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFS 660
             SM K+ES +TKLDVL+WSKY PC++NRQLITLLSTLGV D VFE KQ+E++D LD I +
Sbjct: 601  KSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILT 660

Query: 661  DPLKAQQALELMSPGENTKILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFI 720
             PL+A +AL LM+PGENT ILK ++LCGYKPD+EPFL MML  FR S+LLELR K+RIFI
Sbjct: 661  HPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFI 720

Query: 721  PNGRAMMGCLDETRNLEYGEVFVQCSAHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPC 780
              GR+MMGCLDETR LEYG+V VQ S  +            +   RFI+TG VVV KNPC
Sbjct: 721  SGGRSMMGCLDETRTLEYGQVVVQYSDPM------------RPGRRFIITGPVVVAKNPC 780

Query: 781  LHPGDVRVLTAVDVPSLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPK 840
            LHPGDVRVL AV+VP+L+HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD +L+PP+
Sbjct: 781  LHPGDVRVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPR 840

Query: 841  QVEPMDYTPVPSKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSKPC 900
              EPMDYTP P+++LDHD+T+EEV+EYFANY+VNDSLGIIANAHTAFADKE  KA S PC
Sbjct: 841  TSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPC 900

Query: 901  IELAKLFSIAVDFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDNIG 960
            IELAK FS AVDFPKTGV A+IP +L V+EYPDFM+K DK TY+S NV+GKLFR +    
Sbjct: 901  IELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERA 960

Query: 961  PNIKNIRSFTYTPEVARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYKIKTEA 1020
            P + +I+SFT   +VA ++YD DMEV+GFEEY+D+A Y K NYD +LGNLM YY IKTEA
Sbjct: 961  PPLISIKSFTL--DVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEA 1020

Query: 1021 ELINGGSLTSSLSFTMKNEAESIAMAVKSLRKEARGWFNEKADLHYGHDTNVYARASAWY 1080
            E+++GG +  S SFT + +AESI  AV++LRKE    FN   +     + N  A+ASAWY
Sbjct: 1021 EILSGGIMRMSKSFTKRRDAESIGRAVRALRKETLSLFNASEE-----EENESAKASAWY 1075

Query: 1081 FVTYHHTYWGWSDGRKNHGHFLSFPCC 1097
             VTYH +YWG  +   N  HFLSF  C
Sbjct: 1081 HVTYHSSYWGLYNEGLNRDHFLSFAWC 1075

[Close]
BLAST of HG10014758 vs. TAIR 10
Match: AT4G11130.1 (RNA-dependent RNA polymerase 2 )

HSP 1 Score: 724.2 bits (1868), Expect = 1.7e-208
Identity = 420/1115 (37.67%), Postives = 644/1115 (57.76%), Query Frame = 0 

Query: 4    TIQLFGFPRSVSQESVKTFVERFTGVGTIDAINTKRSKGRGR-RLYAIIQFTD-EEGAKS 63
            T+++   P+++  + +  F+E   G  T+ A+    ++   + R +A +QFT  E  +++
Sbjct: 11   TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRA 70

Query: 64   IISKATEGLFYGTSYLKATEWNHDILPDPLVFKYNFKGLKLNLGCQISKES-FSVLWTES 123
             +  +   L + T  L+ +E   DI+P P+  +     + L +G   S E  F  L    
Sbjct: 71   QLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEKWD 130

Query: 124  NVSVDFRFERRKLYFFISYPHVDYMLVLHYENIWQVELHKPQGQS--VDYLLIQLFGAPR 183
             V      E+R++ F++      Y + + +E+I +       G +  +D  L++L   P+
Sbjct: 131  GVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYGPK 190

Query: 184  IYERDAIS-SGHITEDPFLNFSMEIDTQWFRATDFTPSCCIGQSAALCLEIPYGRQLPNF 243
            +++R  +  +     D +     + D  W R TDF+ S  IG S   CLE+  G  + + 
Sbjct: 191  VFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTMLDI 250

Query: 244  HDKFAYFKEIKGKFTLVSGSTYSSNVNLVPVVRPP-LTINLPYAILFKINLLVQ-QGCLP 303
                 Y++E     T V G T++S   +VP++    L +  PY ILF++N LV  Q    
Sbjct: 251  FSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQKISL 310

Query: 304  GPALDISFYQMVDPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYF-KLKNPPQP 363
              A D+   +++       A +   LKKL      CY+P  ++  + +    K+K+ P  
Sbjct: 311  FAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSPAS 370

Query: 364  PILSLNE-GLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEELDKM 423
                L E  ++   R  VTP K+Y  GPE+  +N V++ + +++++F+RV+FV+E+  K+
Sbjct: 371  AYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSKL 430

Query: 424  YSTELSPRASSS--LEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFA 483
             +  LS  +     ++  +T I+ R+LS+L +GIT+G K+FEFLA+S+SQLR N+ WMFA
Sbjct: 431  PANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMFA 490

Query: 484  PRDGLTAARIRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESVG 543
              + + A  IR WMG F  IR+++K AAR+GQ F +S +T  V  ++V  IPDIEV +  
Sbjct: 491  SNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEV-TTD 550

Query: 544  GVNYVFSDGIGKISDSFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNS 603
            G +Y FSDGIGKIS +FA++VAQKCG+ H PSAFQIRY G+KGVI+VD +S  KLSLR+S
Sbjct: 551  GADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAVDRSSFRKLSLRDS 610

Query: 604  MLKYESTDTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDP 663
            MLK++S +  L+V  W++  PCFLNR++I LLSTLG+ED +FE+ Q   +  L  +  D 
Sbjct: 611  MLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLEDR 670

Query: 664  LKAQQALELMSPGENTK-ILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFIP 723
              A   L+ +S GEN+K +L +M+L GY P SEP+L MML    ES+L EL+ + RI +P
Sbjct: 671  DAALNVLQKLS-GENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVP 730

Query: 724  NGRAMMGCLDETRNLEYGEVFVQCS-AHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPC 783
             GR ++GC+DE   LEYG+V+V+ +    +L + +  + R       +V G VVV KNPC
Sbjct: 731  KGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPC 790

Query: 784  LHPGDVRVLTAVDVPSLHH--MVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIP 843
            LHPGD+RVL A+          +DC++FPQKG RPHPNECSG DLDGD +FV WD  +IP
Sbjct: 791  LHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIP 850

Query: 844  PKQVEPMDYTPVPSKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSK 903
             +   PMDY     +L+DHD+T+EE+ ++F +YM++D+LG+I+ AH   AD++ EKA S+
Sbjct: 851  SEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQ 910

Query: 904  PCIELAKLFSIAVDFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDN 963
             C+ELA L S AVDF KTG PA +P  L+ +E+PDF+++ +K TY S++V GKL+R + +
Sbjct: 911  KCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVKS 970

Query: 964  IGPNIKNIRSFTYTPEVARQ---AYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYK 1023
                 K        PE   +   AYD  +E  GFE +++ A  H++ Y  +L +LM YY 
Sbjct: 971  SLAQRK--------PEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYG 1030

Query: 1024 IKTEAELINGGSLTSSLSFTMKNE-----AESIAMAVKSLRKEARGWFNEKADLHYGHDT 1083
               E E++ G   T  +     N       + I ++VK L KEA GWF +  +     + 
Sbjct: 1031 AANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCE----DEQ 1090

Query: 1084 NVYARASAWYFVTYHHTYWGWSDGRKNHGHFLSFP 1095
                 ASAWY+VTY+  +      R     FLSFP
Sbjct: 1091 QKKKLASAWYYVTYNPNH------RDEKLTFLSFP 1103

[Close]
BLAST of HG10014758 vs. TAIR 10
Match: AT3G49500.1 (RNA-dependent RNA polymerase 6 )

HSP 1 Score: 559.3 bits (1440), Expect = 7.2e-159
Identity = 385/1075 (35.81%), Postives = 562/1075 (52.28%), Query Frame = 0 

Query: 95   YNFKGLKLNLGCQISKESFSVLWTESNV---------SVDFRFERRKLYFF-----ISYP 154
            Y   G+ L +G  +S++ F V W    V         +  F F +   + F      +  
Sbjct: 130  YKLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVI 189

Query: 155  HVDYMLVLHYENIWQVELHKPQGQSVDYLLIQLFGAPRIYERDAISSGHITEDPFLNFSM 214
            + DY L L   +I  V  +K     V  L++QL  +PR++ R A    + T    L   +
Sbjct: 190  NCDYKLELLVRDIQTVRQYKTLHGFV--LILQLASSPRVWYRTADDDIYDTVPGDL---L 249

Query: 215  EIDTQWFRATDFTPSCCIGQ--SAALCLEIPYGRQLPNFHDKFAYFKEIKGKFTLVSGST 274
            + D  W R TDFT    IG+  S  + +   Y  +L    D   YF+  + +   V    
Sbjct: 250  DDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALD---YFRMRRVQEERV---R 309

Query: 275  YSSNVNLVPVVRPPLTIN---------LPYAILFKINLLVQQGCLPGPALDISFYQMV-- 334
            +   +   P    P++ +         + + I+F +N ++ +G      L   F+ ++  
Sbjct: 310  WPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRN 369

Query: 335  DPQMYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILSLNEGLVYVH 394
             P+  NIA    +LK L   K   ++  K L  +  + +  KNP        +E +  + 
Sbjct: 370  QPKDVNIA----SLKHLCTYKRPVFDAYKRL--KLVQEWIQKNPKLLGSHEQSEDISEIR 429

Query: 395  RVQVTPCKVYFCGPEVNVSNRVLRRYPDYLNNFLRVSFVDEELDKMYSTELS-------P 454
            R+ +TP + Y   PEV +SNRVLRRY      FLRV+F+DE +  + S  LS        
Sbjct: 430  RLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVK 489

Query: 455  RASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTAAR 514
              +SS    KT +FKR+ S+L DG  +  +K+ FLA+S++QLR+ +AW FA       + 
Sbjct: 490  DLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSD 549

Query: 515  IRRWMGNFHGIRNVAKYAARLGQSFGSSTETSSVSRREVNLIPDIEVESVGGVNYVFSDG 574
            I+ WMG F   +NVAK AAR+G  F S+  T  V   EV    D EV  +    YVFSDG
Sbjct: 550  IKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEV----DTEVPDIERNGYVFSDG 609

Query: 575  IGKISDSFARKVAQ--KCGIRHTPSAFQIRYAGFKGVISVDPTSS--VKLSLRNSMLKYE 634
            IG I+   A +V +  K  + ++P A+QIRYAGFKGV++  P+ S  ++L+LR+SM K+ 
Sbjct: 610  IGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFF 669

Query: 635  STDTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDPLKAQQ 694
            S  T L++ SW+++ P FLNRQ+ITLLS LGV D +F   Q+ ++ +L+ I  D   A +
Sbjct: 670  SKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFE 729

Query: 695  ALELMSPGENTKILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKSRIFIPNGRAMM 754
             L   S  E       M+  G+KP +EP L  ML + R ++L  LR KSRIF+ +GR +M
Sbjct: 730  VL-TASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLM 789

Query: 755  GCLDETRNLEYGEVFVQCSAH-----LQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPCLH 814
            GCLDE   LE+G+ F+Q S          H     FK +K++   +V G V + KNPCLH
Sbjct: 790  GCLDEAGILEHGQCFIQVSKPSIENCFSKHGSR--FKETKTDLE-VVKGYVAIAKNPCLH 849

Query: 815  PGDVRVLTAVDVPSLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP--K 874
            PGDVR+L AVDVP LHHM DC++FPQKG RPH NE SGSDLDGD+YFV WD  LIPP  K
Sbjct: 850  PGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRK 909

Query: 875  QVEPMDYTPVPSKLLDHDITMEEVQEYFANYMVNDSLGIIANAHTAFADKEAEKAMSKPC 934
                M Y     K L   +  +++ ++FA  + N+ LG I NAH   AD+    AM + C
Sbjct: 910  SYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEEC 969

Query: 935  IELAKLFSIAVDFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNVLGKLFRMLDNIG 994
            + LA+L + AVDFPKTG    +P +L+ + YPDFM K D  TYKS+ +LG+L+R +  + 
Sbjct: 970  LLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVY 1029

Query: 995  PNIKNIRSFTYTPEVARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMHYYKIKTEA 1054
                   S   T + +   YD  +E+ GFE+ + +A  HK  YD +L  L+  YK++ E 
Sbjct: 1030 DEDAEASSEEST-DPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEE 1089

Query: 1055 ELINGGSLTSSLSFTMKNEA---ESIAMAVKSLRKEARGWFNEKADLHYG---HDTNVY- 1112
            E++  G + S   +T K +    E +  +  SL+KE R  F E    H      + N+  
Sbjct: 1090 EIVT-GHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILY 1149

[Close]
BLAST of HG10014758 vs. TAIR 10
Match: AT2G19910.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 117.5 bits (293), Expect = 7.3e-26
Identity = 135/490 (27.55%), Postives = 216/490 (44.08%), Query Frame = 0 

Query: 524 DIEVESVGGVNYVFSDGIGKISDSFAR---------------KVAQK---------CGIR 583
           D +V    G   + SDG G IS+  AR                +  K         CG +
Sbjct: 389 DKDVLDKNGKPCIHSDGTGYISEDLARMCPVNIFKGKSMRSNNIQSKNLNFEGQGPCG-Q 448

Query: 584 HTPSAFQIR--YAGF--KGVISVDPTSSVK-LSLRNSMLK-YE-------STDTKLDVLS 643
             P   Q R  Y G+  KG    +     + + +R SM+K YE       ST   L+V++
Sbjct: 449 EPPLLIQFRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVT 508

Query: 644 WSK-YHPCFLNRQLITLLSTLGVEDHVFESKQKELIDELDTIFSDPLKAQQALELMSPGE 703
            S       L+R L+ LLS  GV +  F +  +  ++E  TIF     A +A   ++ G+
Sbjct: 509 TSNPPRKARLSRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKA--AINYGD 568

Query: 704 NTKILKEMMLCGYKPDSEPFLWMMLHTFRESRLLELRRKS----RIFIPNGRAMMGCLDE 763
           + +   +M+L G  P  EP+L       R S LL+  R +    R  I     +MG +D 
Sbjct: 569 D-QYTADMILVGI-PLDEPYL-----KDRLSYLLKTERNALKAGRFPIDESYYIMGTVDP 628

Query: 764 TRNLEYGEVFVQCSAHLQLHNDNIIFKRSKSNPRFIVTGTVVVGKNPCLHPGDVRVLTAV 823
           T  L+  E+ V       LH+  I             +G V+V +NP LH GD+ VL A 
Sbjct: 629 TGELKENEICV------ILHSGQI-------------SGDVLVYRNPGLHFGDIHVLKAT 688

Query: 824 DVPSLHHMVD----CVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP-KQVEPMDY 883
            V +L   V      V FPQKG R   +E +G D DGD+YF+  +P L+   K  EP   
Sbjct: 689 YVKALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVS 748

Query: 884 TPVPSKLL----DHDITMEEVQEYF------ANYMVNDSLGIIANAHTAFAD-------- 943
           +  PSK+       +++ EE++E        A +   D +G+ A+      D        
Sbjct: 749 SSKPSKIYCGRKPSELSEEELEEELFKMFLKARFCKRDVIGMAADCWLGIMDPFLTLGDE 808

Query: 944 -KEAEKAMSKPCIELAKLFSIAVDFPKTGVPALIPANLRVQEYPDFMDKADKVTYKSDNV 948
             + +    K  ++L  ++  A+D PK G    +P +L ++ +P +M++  K  ++S ++
Sbjct: 809 SAKEKYERKKNILKLIDIYYDALDAPKKGAKVDLPPDLEIKNFPHYMERDPKRDFRSTSI 849

[Close]
BLAST of HG10014758 vs. TAIR 10
Match: AT2G19930.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 109.4 bits (272), Expect = 2.0e-23
Identity = 137/518 (26.45%), Postives = 225/518 (43.44%), Query Frame = 0 

Query: 489 HGIRNVAKYAARLGQSFGSSTETSSVSRREVNL--IPDIEVESVGGVNY--------VFS 548
           H    +A Y AR      S T+T  V    +    I DI      G +         + S
Sbjct: 341 HRAPTLANYMARFSLIL-SKTKTLEVDMTGITFDQIDDIHCHDQDGKDVLDKNKKPCIHS 400

Query: 549 DGIGKISDSFAR--------------KVAQKCGIRHTPSAFQIR--YAGF--KGVISVDP 608
           DG G IS+  AR              +  Q+   +  P   Q R  Y G+  KG   ++ 
Sbjct: 401 DGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMFYDGYAVKGTFLLNK 460

Query: 609 TSSVK-LSLRNSMLKYE--------STDTKLDVLSWSK-YHPCFLNRQLITLLSTLGVED 668
               + + +R SM+K          ST   L+V++ S       L++ L+ LLS  G+ +
Sbjct: 461 KLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLSYGGIPN 520

Query: 669 HVFESKQKELIDELDTIFSDPLKAQQALELMSPGE-NTKILKEMMLCGYKPDSEPFLWMM 728
             F       ++E  +IF +   A  A   ++ GE + +   +M+L G  P  EP L   
Sbjct: 521 EFFLDILLNTLEESKSIFYNKRAALNA--ALNYGEMDDQNAAQMILVGI-PLDEPHLKNY 580

Query: 729 LHTFRESRLLELRRKSRIFIPNGRAMMGCLDETRNLEYGEVFVQCSAHLQLHNDNIIFKR 788
           L    ++   +L +  ++ +     +MG +D T  L+  EV V             I + 
Sbjct: 581 LSILLKTEKNDL-KAGKLPVTESYYLMGTVDPTGALKEDEVCV-------------ILES 640

Query: 789 SKSNPRFIVTGTVVVGKNPCLHPGDVRVLTAVDVPSLHHMVD----CVVFPQKGSRPHPN 848
            +      ++G V+V +NP LH GD+ +L A  V +L   V      V FPQKG R   +
Sbjct: 641 GQ------ISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGD 700

Query: 849 ECSGSDLDGDIYFVCWDPDLIPP-KQVEP-MDYTP--------VPSKLLDHDITMEEVQE 908
           E +G D DGD+YF+  +P+L+   K  EP +  TP         PS+L   ++  EE+ E
Sbjct: 701 EIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELE-EELFE 760

Query: 909 YF--ANYMVNDSLGIIANAHTAFADK---------EAEKAMSKPCIELAKLFSIAVDFPK 943
            F  A +  ++ +GI A++     D+         E +  M K  +EL  ++  A+D PK
Sbjct: 761 MFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPK 820

The following BLAST results are available for this feature:
BLAST of HG10014758 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038877934.10.0e+0093.70RNA-dependent RNA polymerase 1-like isoform X1 [Benincasa hispida] >XP_038877936... [more]
NP_001267682.10.0e+0091.70RNA-dependent RNA polymerase 1-like [Cucumis sativus] >XP_011654424.1 RNA-depend... [more]
ALM88234.10.0e+0091.42RNA-dependent RNA polymerase 1b [Cucumis sativus][more]
BAL63010.10.0e+0091.24RNA-dependent RNA polymerase 1 [Cucumis sativus][more]
XP_022943176.10.0e+0085.40RNA-dependent RNA polymerase 1-like [Cucurbita moschata][more]
BLAST of HG10014758 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LQV20.0e+0060.34RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1[more]
Q0DXS38.1e-25661.33Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947... [more]
O825042.4e-20737.67RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1[more]
Q7XM312.4e-19937.41Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947... [more]
Q9SG021.0e-15735.81RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1[more]
BLAST of HG10014758 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
E9NWK70.0e+0091.70RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G239640 PE=2 SV=... [more]
A0A0S1YCZ70.0e+0091.42RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=RDR1b PE=2 SV=1[more]
H3K3Y90.0e+0091.24RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=RDR1 PE=2 SV=1[more]
A0A6J1FR020.0e+0085.40RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447986 PE=3 ... [more]
A0A6J1K2Q90.0e+0085.04RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111490531 PE=3 SV... [more]
BLAST of HG10014758 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G14790.10.0e+0060.34RNA-dependent RNA polymerase 1 [more]
AT4G11130.11.7e-20837.67RNA-dependent RNA polymerase 2 [more]
AT3G49500.17.2e-15935.81RNA-dependent RNA polymerase 6 [more]
AT2G19910.17.3e-2627.55RNA-dependent RNA polymerase family protein [more]
AT2G19930.12.0e-2326.45RNA-dependent RNA polymerase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePFAMPF05183RdRPcoord: 371..944
e-value: 1.9E-185
score: 617.8
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePANTHERPTHR23079RNA-DEPENDENT RNA POLYMERASEcoord: 2..1111
NoneNo IPR availablePANTHERPTHR23079:SF44RNA-DEPENDENT RNA POLYMERASEcoord: 2..1111
NoneNo IPR availableCDDcd00590RRM_SFcoord: 5..73
e-value: 2.10963E-6
score: 44.6033
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 3..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10014758.1HG10014758.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0070919 production of siRNA involved in gene silencing by small RNA
biological_process GO:0030422 production of siRNA involved in RNA interference
biological_process GO:0001172 transcription, RNA-templated
cellular_component GO:0031380 nuclear RNA-directed RNA polymerase complex
molecular_function GO:0003723 RNA binding
molecular_function GO:0003968 RNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0003676 nucleic acid binding