HG10014734 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10014734
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr02: 18883571 .. 18883867 (-)
RNA-Seq Expression	HG10014734
Synteny	HG10014734

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCATGAATGTGCATCAAAATGGTCTTTGGGTGTTGCAAAAACCATTCCTGGGCTTATTGTGAAGGATGTAATTAATCCAGATTCCCATTTGTGGGTTTCGTTGGTGAATGTATATGCAAAGTGCAGGTACTCTTCATATGCTCGATTAGTGCTTGCTAAAATGCCTGATCATGATGTTGTTTCTTGGACGGCATTAATTCAAGGTCTTGTAGCAGAAGGATTTGTTAACGATAGTATTTATTTATTTCAGGAGATGCAAATGAAGGAATCATGCCCAATGAGTTCACTCTAG

mRNA sequence

ATGTTGCATGAATGTGCATCAAAATGGTCTTTGGGTGTTGCAAAAACCATTCCTGGGCTTATTGTGAAGGATGTAATTAATCCAGATTCCCATTTGTGGGTTTCGTTGGTGAATGTATATGCAAAGTGCAGGTACTCTTCATATGCTCGATTAGTGCTTGCTAAAATGCCTGATCATGATGTTGTTTCTTGGACGGCATTAATTCAAGGTCTTGTAGCAGAAGGATTTGTTAACGATAGTATTTATTTATTTCAGGAGATGCAAATGAAGGAATCATGCCCAATGAGTTCACTCTAG

Coding sequence (CDS)

ATGTTGCATGAATGTGCATCAAAATGGTCTTTGGGTGTTGCAAAAACCATTCCTGGGCTTATTGTGAAGGATGTAATTAATCCAGATTCCCATTTGTGGGTTTCGTTGGTGAATGTATATGCAAAGTGCAGGTACTCTTCATATGCTCGATTAGTGCTTGCTAAAATGCCTGATCATGATGTTGTTTCTTGGACGGCATTAATTCAAGGTCTTGTAGCAGAAGGATTTGTTAACGATAGTATTTATTTATTTCAGGAGATGCAAATGAAGGAATCATGCCCAATGAGTTCACTCTAG

Protein sequence

MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHDVVSWTALIQGLVAEGFVNDSIYLFQEMQMKESCPMSSL

Homology

[Close]

BLAST of HG10014734 vs. NCBI nr
Match: XP_023004202.1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 166.0 bits (419), Expect = 1.6e-37
Identity = 81/94 (86.17%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 1   MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHD 60
           MLHECAS  SLG AK I GL+VKDVINPDSHLWVSLVNVYAKCRYS+YARLVLAKMPD D
Sbjct: 138 MLHECASNRSLGAAKAIHGLVVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 197

Query: 61  VVSWTALIQGLVAEGFVNDSIYLFQEMQMKESCP 95
           VVSWTALIQGLVAEGFVNDSIYLFQEMQ +   P
Sbjct: 198 VVSWTALIQGLVAEGFVNDSIYLFQEMQNEGIMP 231

[Close]

BLAST of HG10014734 vs. NCBI nr
Match: XP_023004203.1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 166.0 bits (419), Expect = 1.6e-37
Identity = 81/94 (86.17%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 1   MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHD 60
           MLHECAS  SLG AK I GL+VKDVINPDSHLWVSLVNVYAKCRYS+YARLVLAKMPD D
Sbjct: 118 MLHECASNRSLGAAKAIHGLVVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177

Query: 61  VVSWTALIQGLVAEGFVNDSIYLFQEMQMKESCP 95
           VVSWTALIQGLVAEGFVNDSIYLFQEMQ +   P
Sbjct: 178 VVSWTALIQGLVAEGFVNDSIYLFQEMQNEGIMP 211

[Close]

BLAST of HG10014734 vs. NCBI nr
Match: XP_031745040.1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 2.8e-37
Identity = 82/94 (87.23%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 1  MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHD 60
          ML ECASK SLGVAK I GLIVKDVINPDSHLWVSLVNVYAKCRYS+YARLVLAKMPD D
Sbjct: 1  MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 60

Query: 61 VVSWTALIQGLVAEGFVNDSIYLFQEMQMKESCP 95
          VVSWTALIQGLVAEGF NDSIYLFQEMQ +   P
Sbjct: 61 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMP 94

[Close]

BLAST of HG10014734 vs. NCBI nr
Match: XP_004147002.1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 [Cucumis sativus] >XP_011659297.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 [Cucumis sativus] >XP_011659298.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 [Cucumis sativus] >XP_011659299.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 [Cucumis sativus] >XP_031745036.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 [Cucumis sativus] >XP_031745037.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 [Cucumis sativus] >XP_031745038.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 [Cucumis sativus] >XP_031745039.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 [Cucumis sativus] >KAE8646313.1 hypothetical protein Csa_016272 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 2.8e-37
Identity = 82/94 (87.23%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 1   MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHD 60
           ML ECASK SLGVAK I GLIVKDVINPDSHLWVSLVNVYAKCRYS+YARLVLAKMPD D
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177

Query: 61  VVSWTALIQGLVAEGFVNDSIYLFQEMQMKESCP 95
           VVSWTALIQGLVAEGF NDSIYLFQEMQ +   P
Sbjct: 178 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMP 211

[Close]

BLAST of HG10014734 vs. NCBI nr
Match: XP_038898110.1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like isoform X2 [Benincasa hispida])

HSP 1 Score: 165.2 bits (417), Expect = 2.8e-37
Identity = 80/94 (85.11%), Postives = 85/94 (90.43%), Query Frame = 0


Query: 1   MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHD 60
           +LHECASK SLGVAK I GLIVKDVINPDSHLWVSLVNVYAKCRYS+YARLVLAKMPD D
Sbjct: 89  ILHECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 148

Query: 61  VVSWTALIQGLVAEGFVNDSIYLFQEMQMKESCP 95
           VVSWTALIQGL+AEGF NDSIYL+QEMQ +   P
Sbjct: 149 VVSWTALIQGLIAEGFANDSIYLYQEMQNEGIMP 182

[Close]

BLAST of HG10014734 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 9.6e-09
Identity = 30/87 (34.48%), Postives = 45/87 (51.72%), Query Frame = 0


Query: 1   MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHD 60
           +L  C  +  L V K I GL+VK   + D      L N+YAKCR  + AR V  +MP+ D
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200

Query: 61  VVSWTALIQGLVAEGFVNDSIYLFQEM 88
           +VSW  ++ G    G    ++ + + M
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSM 227

[Close]

BLAST of HG10014734 vs. ExPASy Swiss-Prot
Match: O64705 (Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E23 PE=3 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 1.6e-08
Identity = 27/84 (32.14%), Postives = 48/84 (57.14%), Query Frame = 0


Query: 5   CASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHDVVSW 64
           CA    +GV +++   + K  +  D H+  SL+ +YAKC    YAR +  ++ + D VSW
Sbjct: 142 CAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSW 201

Query: 65  TALIQGLVAEGFVNDSIYLFQEMQ 89
            ++I G    G+  D++ LF++M+
Sbjct: 202 NSMISGYSEAGYAKDAMDLFRKME 225

[Close]

BLAST of HG10014734 vs. ExPASy Swiss-Prot
Match: O49399 (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E101 PE=3 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 2.8e-08
Identity = 31/88 (35.23%), Postives = 48/88 (54.55%), Query Frame = 0


Query: 1   MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHD 60
           +L  CA+       + I GL +K  +  D  +  +LVNVY +  Y   AR VL +MP  D
Sbjct: 146 VLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRD 205

Query: 61  VVSWTALIQGLVAEGFVNDSIYLFQEMQ 89
            VSW +L+   + +G V+++  LF EM+
Sbjct: 206 AVSWNSLLSAYLEKGLVDEARALFDEME 233

[Close]

BLAST of HG10014734 vs. ExPASy Swiss-Prot
Match: O04590 (Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E10 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.8e-08
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 29  DSHLWVSLVNVYAKCRYSSYARLVLAKMPDHDVVSWTALIQGLVAEGFVNDSIYLFQEMQ 88
           DS  W ++++ YAK R    A L+  KMP+ + VSW+A+I G    G V+ ++ LF++M 
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMP 194

Query: 89  MKESCPMSSL 99
           +K+S P+ +L
Sbjct: 195 VKDSSPLCAL 204

[Close]

BLAST of HG10014734 vs. ExPASy Swiss-Prot
Match: Q9ZVG8 (Pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E54 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.7e-08
Identity = 32/93 (34.41%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 1   MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHD 60
           +L  CA   +  V +T+  L+ ++ I  D+ L  +LV++YAK      A  +  +M D D
Sbjct: 334 LLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKD 393

Query: 61  VVSWTALIQGLVAEGFVNDSIYLFQEMQMKESC 94
           V SWTA+I G  A G   +++ LF +M+ +E+C
Sbjct: 394 VKSWTAMISGYGAHGLAREAVTLFNKME-EENC 425

[Close]

BLAST of HG10014734 vs. ExPASy TrEMBL
Match: A0A6J1KPS1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497601 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 7.8e-38
Identity = 81/94 (86.17%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 1   MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHD 60
           MLHECAS  SLG AK I GL+VKDVINPDSHLWVSLVNVYAKCRYS+YARLVLAKMPD D
Sbjct: 138 MLHECASNRSLGAAKAIHGLVVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 197

Query: 61  VVSWTALIQGLVAEGFVNDSIYLFQEMQMKESCP 95
           VVSWTALIQGLVAEGFVNDSIYLFQEMQ +   P
Sbjct: 198 VVSWTALIQGLVAEGFVNDSIYLFQEMQNEGIMP 231

[Close]

BLAST of HG10014734 vs. ExPASy TrEMBL
Match: A0A6J1KYS7 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497601 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 7.8e-38
Identity = 81/94 (86.17%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 1   MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHD 60
           MLHECAS  SLG AK I GL+VKDVINPDSHLWVSLVNVYAKCRYS+YARLVLAKMPD D
Sbjct: 118 MLHECASNRSLGAAKAIHGLVVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177

Query: 61  VVSWTALIQGLVAEGFVNDSIYLFQEMQMKESCP 95
           VVSWTALIQGLVAEGFVNDSIYLFQEMQ +   P
Sbjct: 178 VVSWTALIQGLVAEGFVNDSIYLFQEMQNEGIMP 211

[Close]

BLAST of HG10014734 vs. ExPASy TrEMBL
Match: A0A5A7VA11 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001560 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.3e-37
Identity = 82/94 (87.23%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 1   MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHD 60
           ML ECASK SLGVAK I GLIVKDVINPDSHLWVSLVNVYAKCRYS+YARLVLAKMPD D
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177

Query: 61  VVSWTALIQGLVAEGFVNDSIYLFQEMQMKESCP 95
           VVSWTALIQGLVAEGF NDSIYLFQEMQ +   P
Sbjct: 178 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMP 211

[Close]

BLAST of HG10014734 vs. ExPASy TrEMBL
Match: A0A0A0K4Y9 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G388380 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.3e-37
Identity = 82/94 (87.23%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 1   MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHD 60
           ML ECASK SLGVAK I GLIVKDVINPDSHLWVSLVNVYAKCRYS+YARLVLAKMPD D
Sbjct: 223 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 282

Query: 61  VVSWTALIQGLVAEGFVNDSIYLFQEMQMKESCP 95
           VVSWTALIQGLVAEGF NDSIYLFQEMQ +   P
Sbjct: 283 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMP 316

[Close]

BLAST of HG10014734 vs. ExPASy TrEMBL
Match: A0A6J1H8P7 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461078 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.7e-37
Identity = 81/94 (86.17%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 1   MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHD 60
           +LHECAS  SLG AK I GLIVKDVINPDSHLWVSLVNVYAKCRYS+YARLVLAKMPD D
Sbjct: 118 VLHECASNRSLGAAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177

Query: 61  VVSWTALIQGLVAEGFVNDSIYLFQEMQMKESCP 95
           VVSWTALIQGLVAEGFVNDSIYLFQEMQ +   P
Sbjct: 178 VVSWTALIQGLVAEGFVNDSIYLFQEMQNEGIMP 211

[Close]

BLAST of HG10014734 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 6.8e-10
Identity = 30/87 (34.48%), Postives = 45/87 (51.72%), Query Frame = 0


Query: 1   MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHD 60
           +L  C  +  L V K I GL+VK   + D      L N+YAKCR  + AR V  +MP+ D
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200

Query: 61  VVSWTALIQGLVAEGFVNDSIYLFQEM 88
           +VSW  ++ G    G    ++ + + M
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSM 227

[Close]

BLAST of HG10014734 vs. TAIR 10
Match: AT2G34400.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-09
Identity = 27/84 (32.14%), Postives = 48/84 (57.14%), Query Frame = 0


Query: 5   CASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHDVVSW 64
           CA    +GV +++   + K  +  D H+  SL+ +YAKC    YAR +  ++ + D VSW
Sbjct: 142 CAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSW 201

Query: 65  TALIQGLVAEGFVNDSIYLFQEMQ 89
            ++I G    G+  D++ LF++M+
Sbjct: 202 NSMISGYSEAGYAKDAMDLFRKME 225

[Close]

BLAST of HG10014734 vs. TAIR 10
Match: AT1G62260.1 (mitochondrial editing factor 9 )

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-09
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 29  DSHLWVSLVNVYAKCRYSSYARLVLAKMPDHDVVSWTALIQGLVAEGFVNDSIYLFQEMQ 88
           DS  W ++++ YAK R    A L+  KMP+ + VSW+A+I G    G V+ ++ LF++M 
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMP 194

Query: 89  MKESCPMSSL 99
           +K+S P+ +L
Sbjct: 195 VKDSSPLCAL 204

[Close]

BLAST of HG10014734 vs. TAIR 10
Match: AT4G18840.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-09
Identity = 31/88 (35.23%), Postives = 48/88 (54.55%), Query Frame = 0


Query: 1   MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHD 60
           +L  CA+       + I GL +K  +  D  +  +LVNVY +  Y   AR VL +MP  D
Sbjct: 146 VLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRD 205

Query: 61  VVSWTALIQGLVAEGFVNDSIYLFQEMQ 89
            VSW +L+   + +G V+++  LF EM+
Sbjct: 206 AVSWNSLLSAYLEKGLVDEARALFDEME 233

[Close]

BLAST of HG10014734 vs. TAIR 10
Match: AT1G26900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 2.6e-09
Identity = 32/93 (34.41%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 1   MLHECASKWSLGVAKTIPGLIVKDVINPDSHLWVSLVNVYAKCRYSSYARLVLAKMPDHD 60
           +L  CA   +  V +T+  L+ ++ I  D+ L  +LV++YAK      A  +  +M D D
Sbjct: 334 LLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKD 393

Query: 61  VVSWTALIQGLVAEGFVNDSIYLFQEMQMKESC 94
           V SWTA+I G  A G   +++ LF +M+ +E+C
Sbjct: 394 VKSWTAMISGYGAHGLAREAVTLFNKME-EENC 425

The following BLAST results are available for this feature:

BLAST of HG10014734 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023004202.1	1.6e-37	86.17	pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like isofor...	[more]
XP_023004203.1	1.6e-37	86.17	pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like isofor...	[more]
XP_031745040.1	2.8e-37	87.23	pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X2 ...	[more]
XP_004147002.1	2.8e-37	87.23	pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 ...	[more]
XP_038898110.1	2.8e-37	85.11	pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like isofor...	[more]

BLAST of HG10014734 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E6Q1	9.6e-09	34.48	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
O64705	1.6e-08	32.14	Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana OX...	[more]
O49399	2.8e-08	35.23	Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana OX...	[more]
O04590	2.8e-08	38.57	Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidop...	[more]
Q9ZVG8	3.7e-08	34.41	Pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Arabidop...	[more]

BLAST of HG10014734 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KPS1	7.8e-38	86.17	pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like isofor...	[more]
A0A6J1KYS7	7.8e-38	86.17	pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like isofor...	[more]
A0A5A7VA11	1.3e-37	87.23	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0K4Y9	1.3e-37	87.23	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G3883...	[more]
A0A6J1H8P7	1.7e-37	86.17	pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like isofor...	[more]

BLAST of HG10014734 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11290.1	6.8e-10	34.48	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G34400.1	1.2e-09	32.14	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G62260.1	2.0e-09	38.57	mitochondrial editing factor 9	[more]
AT4G18840.1	2.0e-09	35.23	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G26900.1	2.6e-09	34.41	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 33..59 e-value: 0.44 score: 10.9 coord: 62..90 e-value: 3.4E-5 score: 23.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 62..94 e-value: 3.7E-6 score: 24.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 60..94 score: 9.930995
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..97 e-value: 3.5E-14 score: 54.5
None	No IPR available	PANTHER	PTHR47929:SF11	BNACNNG15330D PROTEIN	coord: 1..91
None	No IPR available	PANTHER	PTHR47929	FAMILY NOT NAMED	coord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10014734.1	HG10014734.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding