HG10014710 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10014710
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	S1-like domain-containing protein
Location	Chr02: 18313753 .. 18318535 (+)
RNA-Seq Expression	HG10014710
Synteny	HG10014710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGGTGGAAGAAAGAACTTGCAGAGGGCATCAGAGCAACATATCGCAAGCCTCGAAGATGGTCATAGCATTATGCAGGTTGTCTCAATTCGTGGTTCCAATCTAATCGAGGTATCTTTCTATTTCATCGATTATGCTCCCTCTCTCTGATTTTGTCAATTATTTACTTCACCATCTTGCGCATCTGCTATTGCCTACTGCGTTGCATCAATCAATCTGAATGAAAAACTTCTTTAATTGCAGTTAATTATCCACCGATGTTTTGTTTTCAAAATTAAAAATTGTAGGTTTTAATTCTTGCACGTTTGATTGTGGGGTTGCGTTGTGTATTTGAGATATTTGCAAACTATTTAAATAAATGATTCTGATACGCTTGTTGTGTTGCAATTTCTTTGTAGAAATCATACTTCTAGTTAACCATTCATATGGAGCAAGCCATAACCTGTGCAGTTTCTCTGTTTCATGTGCAATAATTTGTTCATTTCTTTATTTTGTAGGAAACCAGGATGTATATTATTTGCCAATTATTTTAAGCGGGCTACTTTATTTTGTATTTTGGAAAATCTTTAATACCATTTGTATTCCTTCATCATCTCTAGGTAATGGATGCACAAGGCGAGAAATCACTGGCATTATTTCCTGCCAAGTTTCAAAAGAGTATGTGGATAAAACGAGGTATGTTCTATTACCCATTCTACTCAACTCATTGTTCCCATCGCATTAAATTGCCTTCCTAAGTAAGCAAGGTTCATTTTTTCTCACAGAAAGCTTTGTTTCTTTATTAAAAAAAAATCTACAAAATCAAGAGATCTTCTACTATCAAAAAGAAATGATAGAAGAAAAACAAAAGATCCCTTTTTGCATTTGCCTCACTCTTTATATCAAGGTTTTATGCAGTAAGCTTCACTGTGAACGTCTGGAAACTAGGCTATTTCATTTTCAGTGTTCTAGGAATTCATAAACTGCGGCTGTTGACTGTTAGTTATGACTGTTTCTTCCCCTTTCATTTAGTAGCTTTGACTATATTCATTATAACATAGAGATAGAGGTTATTTTGGATAATTTGTTAGGATCTCAATCTAACAACTAAAATTGTACTCCAATATTGAAGAGAAGTTATATTGCTCATAACCTTTCAGGAGGCTATCATATTGCTAATAGCCTTTCTAGAGGCTATCTCTCCCTCCTTTTGTTTTTTTTTTTTTGAAAAATAGACCGAACAGAAGGTCAGCTACACCTTGGTCTTCTGTTCCTAGAAGCCAAGCTGCCACTAGGGCATTGGCTACTCCAACATAAGGTTGCATCAAAACAAGGTGACCGGAGACTACAATGATGACACATTTGACGTTGCTGCAAACATTTCTTATGGTGATTGGATCGGGTTTAGAAATGGAGAGATTCGTGCTGTCGCCATGGAGGCTCTCCCACAATGACAATGGCATATGAGAACTTGTTCGACTTGACAAATCCCGCATCTAGGTTCTTGTTGTACACTACCTGTGTCGCAGGATTGGTCGTATTCTTCACAACATTGAGGATGGTAGTACCAACAGTGAGATCATTGTTGCTTTGACCCTACCATGTGATTGTCCATCCTCCACATTGATAGCCCAAGTTGTTGGCATGAGTCCCTGCAACTAGTGTCTTTCTAGCTTTTTTAGGAAGAGGAAGCAGTGACTCGTGACAGAGGGATCGTTCTTCAATAGCACAAGCGATTTTCTTACCGCCTCCCTAACCATTTCTCTATGTTTCTTGCTTCCAAGTTGGTTGGCTAGGCTGTTATTCGGCAATGAGTTTTCAAAGAGACCCATAAGGAATTTTGTTCTTAATATCCTATGCATAGCATCATTGATCCTGCTCATTGGAATGATATTATTCTTCACCTGGTGAGTTAGTTCGTCGATGAACTCTATGTAGTTTTCAAGAACCATAATCATGTCAATTCCAGTACTAACTCTAGCTTGAACTGGATATGAAGAATTAGCATGTGGAGGAGAGGTGATCCTGCCAATCCTTTGCCAATCGAAAATGACAAAACCCTTGAACTTGAGCTTGTCCTTGAGGTAGCTAGTGATAAGGTCATGGTTGGCGTGCATTCTCACTCCATTCCAGCTCGAGTAAGATACCATTACTGTTGCAACTCCCCTCTTTTTATCGAGTTATAATATGCAGGCATGTGAATATTAAGCAATCCATTATAGTTAACCACAGTGTTATTTTCATTGATACTCCTAGTTGTGCCACCATCTACGAAGTGCTTAATACAGGCCTCAACATTTTGTTTTCCCGCAACAAAAGAAATCCCTTTTCGCGAATTAGAAGGAATTGCTCCTTGCAATCCAGGTATAATCTCAATCATTTGTTGAACAATCTTATGATCTTTGCTATAGCTCTCGTAGCATTGACCCCATCTAGGATCTCTGCACACCGCAATACATGGAGAAAAAACGTAAGGAATTCTAGTTGCTCTGATTTCAAGTGTTGTGGCATCCCCAATCCGCCTAAGAAGTTCCAAATCCCTAGTAACTCAAGACCAACAATTTGAGGAAAGATAGTGGCATTGTACACATTATTATGACCATGAACAACATCAATCCCATAAATCATAGGGATCTCAAGACGGGTGGCTAAAGGCCCCTATTGGATCTCATTCACCATATTGACCCAAGTCTCCGCCGTTGCTTTCTCCGCTAGTGCACTCCCTCCTCCGCTCAGTACACTCTCAATGAAATAGTTCTTCATGACGTCCGGGGTTGCAACTTTCTGTTCAATCTCAACCATTTGGCCAATTTTTTCTTCCAAAGTCATCCGACCCATAAGATCTTTGATTCTAGCACCCAATGGCTGTTTAGGGTCTTTGTATTTCAGGTAAGTTGCATCTGTAGTAACGGTCAGGCAGCAAAGCAGCAGCCAAAACCCCATCTAGGGTTTTAAGAACCGCATCATTTTGAGCTAGAATCAAAGATAATTCACAATGTGGTTAACTATCTCTCCCTCCTACAATTCACAATGGACTGATTTTCCAAAATTTTGTCTAATATATGAACTCCCCAACTCCCACTATTTATAACCACTCCACAAACTATCAAGTAATTATAATGTTAAATTACATGTCTAGTCTCTAAGCTTTTAAGTTTTTGTCCATTTGTTCCATGAACTTTAAAAGTATTTAATATGTCCCTGAACTTTTAGTTTCAGATTTGTATTTATTTGGTTCTTAAATTTATAAACTGCCTTATAGGTCCTTAAACTTTGAACTTTATGTCGCCTTTGAAATTTCAATTTTGTGTATAATAAGCCTTTGACCTATATAAGTTAATTTTTCATTTTATTAAAAAAATATGTTAGGAATCTATTAGACACAAAATTAAAAGTTGACTTGTTAGATATTTCTAAAGTTTAGGAATATTTTAGACATTTTTTAAATTTCATTGACCTTTTTGATACAGATTTGAAAGCTTAGGGACTAAACTTGTAATTTAACCTAATTATAATTATGCCACAATTAAGATTACTACTCTAACATAACTTTAGATCCTGCCTTTACTGATTGCTTCTGAAGTACTGAAATAGGTATTTGAAAGAAGTGTTGTTTGCTTTGCCATCATTGCAGGGAGTTTCGTTGTAGTTGATGAAAGTGGAAAGAAGAATGCTCTTGAATCTGGAAGCAAGGTGGCATGCATTGTTTCTCGAGTTCTATATTTTGAACAAGTTCGCGAGCTTCAAAAATCCCCAGAATGGTATGTTTTATTATATCAAATTTCAACGTATTCATTAAAATGGATTAGGCATTACTTGGTAAATTTTGGCGATTCTATTAATCGATGAAACAAATACGAGGGTCTTGCTTATGATCTAACAGATGTCCCTTTGCAAATATTTAGAAGCATGAAATTAACTTTGTTCTTAACTGTTGTGAAAAAGGTGAAGCAGATGGTTAATTTATTTATATGATTGAAATTCGATAAAGAAAACAACCAGATAGATATGCAACATTTTTATTTCTATTGCGTCTTGCACCAAAAAAATAGCTTGTTGGTATCACTATTACTAGTACATGTGGTGCCCTTGTGTCAATGCTTTTTTCTTCTACTACGGTGCAAGCTGAAACTGGAAATAAACCTACCACTCTAAATCATCCTAGGTTGGCCTAATGGCTAATATTGATCATGTAAATAATAAAATTAGAGAAAAATAGGGTCAATTCATGTCGGCCACCTATTTAAAATTTAATATATTACGAACTATCTTGACAATAAAAAAATGTAGTAGTCAGATTGTTTCATGAGAATGGTTAAAGTGCGCACACGTTGATCTGAACACACTCGGATATCCGATAAAACAATGGAAAATGTTAGTTGGTTTGGTTTGGATATCCGATATCCCTAGTCGTTCATGTGGGGAATTGATCTCCGAACAGAGATGAAAAATCCTCATGGAGACGTGGATGGGGTAGTGTATTCCAGTCCCAGCCCAGCCTGTTCTTAGATCTTAGAAAACTGGTTTCACGCACAACTTTTTGTTTTTCTAAAACTGGTAGGTTAATTTACCACACTATTTTTTTACCAATTATTGCAGGCCAGAAATCTTCAAGAATGCAATTGTTGGAGATCGAAATGAAAATCTGCAAGCACAGAATAATCGACAAGAAGAGGATGAGGTTGCTGAGGTCGACTCGAGTGATGATGATGGCCTTCCCCCTCTAGAAGCCAACACGAACAGAGCTAAACCATTAATATTACAACCAGATGCAGAATCAGAGTCTGATTCAGATTCTTAA

mRNA sequence

ATGAAAGGTGGAAGAAAGAACTTGCAGAGGGCATCAGAGCAACATATCGCAAGCCTCGAAGATGGTCATAGCATTATGCAGGTTGTCTCAATTCGTGGTTCCAATCTAATCGAGGTAATGGATGCACAAGGCGAGAAATCACTGGCATTATTTCCTGCCAAGTTTCAAAAGAGTATGTGGATAAAACGAGGGAGTTTCGTTGTAGTTGATGAAAGTGGAAAGAAGAATGCTCTTGAATCTGGAAGCAAGGTGGCATGCATTGTTTCTCGAGTTCTATATTTTGAACAAGTTCGCGAGCTTCAAAAATCCCCAGAATGGCCAGAAATCTTCAAGAATGCAATTGTTGGAGATCGAAATGAAAATCTGCAAGCACAGAATAATCGACAAGAAGAGGATGAGGTTGCTGAGGTCGACTCGAGTGATGATGATGGCCTTCCCCCTCTAGAAGCCAACACGAACAGAGCTAAACCATTAATATTACAACCAGATGCAGAATCAGAGTCTGATTCAGATTCTTAA

Coding sequence (CDS)

ATGAAAGGTGGAAGAAAGAACTTGCAGAGGGCATCAGAGCAACATATCGCAAGCCTCGAAGATGGTCATAGCATTATGCAGGTTGTCTCAATTCGTGGTTCCAATCTAATCGAGGTAATGGATGCACAAGGCGAGAAATCACTGGCATTATTTCCTGCCAAGTTTCAAAAGAGTATGTGGATAAAACGAGGGAGTTTCGTTGTAGTTGATGAAAGTGGAAAGAAGAATGCTCTTGAATCTGGAAGCAAGGTGGCATGCATTGTTTCTCGAGTTCTATATTTTGAACAAGTTCGCGAGCTTCAAAAATCCCCAGAATGGCCAGAAATCTTCAAGAATGCAATTGTTGGAGATCGAAATGAAAATCTGCAAGCACAGAATAATCGACAAGAAGAGGATGAGGTTGCTGAGGTCGACTCGAGTGATGATGATGGCCTTCCCCCTCTAGAAGCCAACACGAACAGAGCTAAACCATTAATATTACAACCAGATGCAGAATCAGAGTCTGATTCAGATTCTTAA

Protein sequence

MKGGRKNLQRASEQHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDRNENLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS

Homology

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BLAST of HG10014710 vs. NCBI nr
Match: XP_038891512.1 (probable RNA-binding protein EIF1AD isoform X1 [Benincasa hispida])

HSP 1 Score: 321.6 bits (823), Expect = 4.1e-84
Identity = 165/172 (95.93%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MKGGRKNLQRASEQHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRASEQHI+S+EDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEQHISSIEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDRNE 120
           IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGD+NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDQNE 120

Query: 121 NLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 173
           NLQAQNNR EEDEV EVDSSDDDGLPPLEANTNR KPLILQPD ESESDSDS
Sbjct: 121 NLQAQNNRPEEDEVTEVDSSDDDGLPPLEANTNRTKPLILQPDTESESDSDS 172

[Close]

BLAST of HG10014710 vs. NCBI nr
Match: XP_004146450.1 (probable RNA-binding protein EIF1AD [Cucumis sativus] >KGN50715.1 hypothetical protein Csa_005860 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 7.2e-81
Identity = 163/172 (94.77%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MKGGRKNLQRASEQHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRASE HIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDRNE 120
           IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQ+RELQKSPEWPEIFKNAIVGDRNE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQIRELQKSPEWPEIFKNAIVGDRNE 120

Query: 121 NLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 173
           NLQAQNN+  ED   EV+SSDDDGLPPLEANTNRAKPLILQPDAESESDSDS
Sbjct: 121 NLQAQNNQPGED---EVNSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 169

[Close]

BLAST of HG10014710 vs. NCBI nr
Match: XP_023547328.1 (probable RNA-binding protein EIF1AD [Cucurbita pepo subsp. pepo] >KAG7031527.1 putative RNA-binding protein EIF1AD [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 307.4 bits (786), Expect = 7.9e-80
Identity = 159/172 (92.44%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MKGGRKNLQRASEQHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRAS QHI  LEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASNQHIVGLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDRNE 120
           IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAI GD+NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAITGDQNE 120

Query: 121 NLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 173
           NLQA+NNRQEED   E+DSSDDDGLPPLEANTNRAKPLILQP+ E+ESDSDS
Sbjct: 121 NLQAENNRQEED---EIDSSDDDGLPPLEANTNRAKPLILQPEEETESDSDS 169

[Close]

BLAST of HG10014710 vs. NCBI nr
Match: XP_022991942.1 (probable RNA-binding protein EIF1AD [Cucurbita maxima])

HSP 1 Score: 307.0 bits (785), Expect = 1.0e-79
Identity = 158/172 (91.86%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MKGGRKNLQRASEQHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRAS QHI  LEDGHSIMQVVS+RGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASNQHIVGLEDGHSIMQVVSVRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDRNE 120
           IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAI GD+NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAITGDQNE 120

Query: 121 NLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 173
           NLQA+NNRQEED   E+DSSDDDGLPPLEANTNRAKPLILQP+ E+ESDSDS
Sbjct: 121 NLQAENNRQEED---EIDSSDDDGLPPLEANTNRAKPLILQPEEETESDSDS 169

[Close]

BLAST of HG10014710 vs. NCBI nr
Match: XP_022942753.1 (probable RNA-binding protein EIF1AD [Cucurbita moschata])

HSP 1 Score: 304.7 bits (779), Expect = 5.1e-79
Identity = 157/172 (91.28%), Postives = 163/172 (94.77%), Query Frame = 0


Query: 1   MKGGRKNLQRASEQHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRAS QHI  LEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASNQHIVGLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDRNE 120
           IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVR+LQKSPEWPEIFKNAI GD+NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRQLQKSPEWPEIFKNAITGDQNE 120

Query: 121 NLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 173
           NLQ +NNRQEED   E+DSSDDDGLPPLEANTNRAKPLILQP+ E+ESDSDS
Sbjct: 121 NLQTENNRQEED---EIDSSDDDGLPPLEANTNRAKPLILQPEEETESDSDS 169

[Close]

BLAST of HG10014710 vs. ExPASy Swiss-Prot
Match: Q7SY07 (Probable RNA-binding protein EIF1AD OS=Danio rerio OX=7955 GN=eif1ad PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-19
Identity = 60/160 (37.50%), Postives = 93/160 (58.13%), Query Frame = 0


Query: 13  EQHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRGSFVVVDES 72
           E ++   ED   IM+V+   G+NL E +   GE+ L   P KF+K++WIKRG FV+VD  
Sbjct: 16  EDYVTPTED-QQIMRVLGSNGNNLHEAVTGSGERFLLSMPTKFRKNIWIKRGDFVIVD-- 75

Query: 73  GKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIF-KNAIVGDRNENLQAQNNRQEE 132
                ++ G KV   +S +LY + ++ L+K   WPE F ++   G+RNE  Q + + ++E
Sbjct: 76  ----PIKEGGKVKGEISFILYRDHIQHLRKLGVWPEGFQEDRTSGERNEGTQKERSEEKE 135

Query: 133 DEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAESESDSD 172
           +E  + +S DDD    L  NTNRA   +L  ++E E+D D
Sbjct: 136 EEEGDSESEDDDS--DLFVNTNRA--TVLYSESEEETDED 164

[Close]

BLAST of HG10014710 vs. ExPASy Swiss-Prot
Match: Q8N9N8 (Probable RNA-binding protein EIF1AD OS=Homo sapiens OX=9606 GN=EIF1AD PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 8.4e-16
Identity = 56/154 (36.36%), Postives = 82/154 (53.25%), Query Frame = 0


Query: 14  QHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESG 73
           +HI    D   I++V+   G+NL EV  AQG++ L   P+K++K++WIKRG F++VD   
Sbjct: 17  EHIVP-SDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD--- 76

Query: 74  KKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDRNENLQAQNNRQEEDE 133
               +E G KV   +S VL  + VR LQK   WPE F        N N Q Q     E +
Sbjct: 77  ---PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAFSEVAEKHNNRNRQTQPELPAEPQ 136

Query: 134 VAEVDSSDDDGLPPLEANTNRAKPLILQPDAESE 168
           ++  +SS +D    L  NTNR +    + ++E E
Sbjct: 137 LSGEESSSEDD-SDLFVNTNRRQYHESEEESEEE 162

[Close]

BLAST of HG10014710 vs. ExPASy Swiss-Prot
Match: Q4R354 (Probable RNA-binding protein EIF1AD OS=Macaca fascicularis OX=9541 GN=EIF1AD PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 8.4e-16
Identity = 56/154 (36.36%), Postives = 82/154 (53.25%), Query Frame = 0


Query: 14  QHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESG 73
           +HI    D   I++V+   G+NL EV  AQG++ L   P+K++K++WIKRG F++VD   
Sbjct: 17  EHIVP-SDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD--- 76

Query: 74  KKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDRNENLQAQNNRQEEDE 133
               +E G KV   +S VL  + VR LQK   WPE F        N N Q Q     E +
Sbjct: 77  ---PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAFSEVAEKHNNRNRQTQPELPAEPQ 136

Query: 134 VAEVDSSDDDGLPPLEANTNRAKPLILQPDAESE 168
           ++  +SS +D    L  NTNR +    + ++E E
Sbjct: 137 LSGEESSSEDD-SDLFVNTNRRQYHESEEESEEE 162

[Close]

BLAST of HG10014710 vs. ExPASy Swiss-Prot
Match: Q58CY2 (Probable RNA-binding protein EIF1AD OS=Bos taurus OX=9913 GN=EIF1AD PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.4e-15
Identity = 55/148 (37.16%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 21  DGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESGKKNALES 80
           D   I++V+   G+NL EV  AQG++ L   P+K++K++WIKRG F++VD       +E 
Sbjct: 23  DQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD------PIEE 82

Query: 81  GSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDRNE-NLQAQNNRQEEDEVAEVDS 140
           G KV   +S VL  + VR LQK   WPE F      D N+ N Q Q     E + +  +S
Sbjct: 83  GEKVKAEISFVLCKDHVRSLQKDGHWPEAFSQVTEKDNNDRNRQTQPELPAEPQSSGEES 142

Query: 141 SDDDGLPPLEANTNRAKPLILQPDAESE 168
           S +D    L  NTNR +    + ++E E
Sbjct: 143 SSEDD-SDLFVNTNRRQYHESEEESEEE 163

[Close]

BLAST of HG10014710 vs. ExPASy Swiss-Prot
Match: Q0V9J5 (Probable RNA-binding protein EIF1AD OS=Xenopus tropicalis OX=8364 GN=eif1ad PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.2e-15
Identity = 56/156 (35.90%), Postives = 87/156 (55.77%), Query Frame = 0


Query: 25  IMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESGKKNALESGSKV 84
           I++V+   G+NL EV  ++GE+ LA  P KF+K++WIKRG F++VD       +  G KV
Sbjct: 27  IVKVLGSPGNNLHEVETSEGERFLASMPTKFRKNIWIKRGDFLIVD------PIAEGEKV 86

Query: 85  ACIVSRVLYFEQVRELQKSPEWPEIF---KNAIVGDRNEN-----LQAQNNRQEEDEVAE 144
              ++ +LY +  R LQK   WPE F   K  +V   NEN      +A +  Q +++  +
Sbjct: 87  KAEIAFILYKDHQRLLQKEGLWPEGFTQDKTGVVTKENENNGIQSTEALSTAQAKEQGED 146

Query: 145 VDSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 173
            ++ DD G   L  NTNR      + ++ESE +S+S
Sbjct: 147 SETDDDSG---LFVNTNRVHYEDSEEESESEEESES 173

[Close]

BLAST of HG10014710 vs. ExPASy TrEMBL
Match: A0A0A0KM30 (S1-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G218810 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.5e-81
Identity = 163/172 (94.77%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MKGGRKNLQRASEQHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRASE HIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDRNE 120
           IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQ+RELQKSPEWPEIFKNAIVGDRNE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQIRELQKSPEWPEIFKNAIVGDRNE 120

Query: 121 NLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 173
           NLQAQNN+  ED   EV+SSDDDGLPPLEANTNRAKPLILQPDAESESDSDS
Sbjct: 121 NLQAQNNQPGED---EVNSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 169

[Close]

BLAST of HG10014710 vs. ExPASy TrEMBL
Match: A0A6J1JNB5 (probable RNA-binding protein EIF1AD OS=Cucurbita maxima OX=3661 GN=LOC111488431 PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.0e-80
Identity = 158/172 (91.86%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MKGGRKNLQRASEQHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRAS QHI  LEDGHSIMQVVS+RGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASNQHIVGLEDGHSIMQVVSVRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDRNE 120
           IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAI GD+NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAITGDQNE 120

Query: 121 NLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 173
           NLQA+NNRQEED   E+DSSDDDGLPPLEANTNRAKPLILQP+ E+ESDSDS
Sbjct: 121 NLQAENNRQEED---EIDSSDDDGLPPLEANTNRAKPLILQPEEETESDSDS 169

[Close]

BLAST of HG10014710 vs. ExPASy TrEMBL
Match: A0A6J1FVM0 (probable RNA-binding protein EIF1AD OS=Cucurbita moschata OX=3662 GN=LOC111447695 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.5e-79
Identity = 157/172 (91.28%), Postives = 163/172 (94.77%), Query Frame = 0


Query: 1   MKGGRKNLQRASEQHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRAS QHI  LEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASNQHIVGLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDRNE 120
           IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVR+LQKSPEWPEIFKNAI GD+NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRQLQKSPEWPEIFKNAITGDQNE 120

Query: 121 NLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 173
           NLQ +NNRQEED   E+DSSDDDGLPPLEANTNRAKPLILQP+ E+ESDSDS
Sbjct: 121 NLQTENNRQEED---EIDSSDDDGLPPLEANTNRAKPLILQPEEETESDSDS 169

[Close]

BLAST of HG10014710 vs. ExPASy TrEMBL
Match: A0A1S3C3W3 (probable RNA-binding protein EIF1AD OS=Cucumis melo OX=3656 GN=LOC103496721 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.2e-79
Identity = 160/172 (93.02%), Postives = 163/172 (94.77%), Query Frame = 0


Query: 1   MKGGRKNLQRASEQHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRASE HIASLEDGHSIM VVSIRGSNLIEVMDAQG KSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMLVVSIRGSNLIEVMDAQGGKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDRNE 120
           IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSP WPEIFKNAIVGDRNE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPGWPEIFKNAIVGDRNE 120

Query: 121 NLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 173
           NL+AQNN+ EED   EV+SSDDDGLPPLEANTNRAKPLILQPD ESESDSDS
Sbjct: 121 NLRAQNNQSEED---EVNSSDDDGLPPLEANTNRAKPLILQPDGESESDSDS 169

[Close]

BLAST of HG10014710 vs. ExPASy TrEMBL
Match: A0A5D3DQ84 (Putative RNA-binding protein EIF1AD OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00330 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.2e-79
Identity = 160/172 (93.02%), Postives = 163/172 (94.77%), Query Frame = 0


Query: 1   MKGGRKNLQRASEQHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRASE HIASLEDGHSIM VVSIRGSNLIEVMDAQG KSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMLVVSIRGSNLIEVMDAQGGKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDRNE 120
           IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSP WPEIFKNAIVGDRNE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPGWPEIFKNAIVGDRNE 120

Query: 121 NLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 173
           NL+AQNN+ EED   EV+SSDDDGLPPLEANTNRAKPLILQPD ESESDSDS
Sbjct: 121 NLRAQNNQSEED---EVNSSDDDGLPPLEANTNRAKPLILQPDGESESDSDS 169

[Close]

BLAST of HG10014710 vs. TAIR 10
Match: AT2G40780.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 186.8 bits (473), Expect = 1.5e-47
Identity = 104/175 (59.43%), Postives = 135/175 (77.14%), Query Frame = 0


Query: 1   MKGGRKNLQRASEQHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           M  GR+NL++A+     +LE+  SI QVVS+RGSN IE+MDA+GE SLALFPAKF++SMW
Sbjct: 1   MNRGRRNLKQAASDQDFTLEECQSIAQVVSLRGSNQIEIMDAKGENSLALFPAKFRESMW 60

Query: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNA--IVGDR 120
           I+RGSFVV+D +GK+ A ESGSKV  IV +VL+FEQVR LQKSPEWPEIFK+   I  ++
Sbjct: 61  IRRGSFVVIDHTGKEKAQESGSKVTSIVCKVLFFEQVRLLQKSPEWPEIFKDTRPIPAEK 120

Query: 121 NENLQAQNNRQEEDEVAEVDSS-DDDGLPPLEANTNRAKPLILQPDAESESDSDS 173
           +  ++     Q ED+  EVDSS DDDG+PPL+ANTNR +P  ++ DAE++S SDS
Sbjct: 121 SSPIE-----QHEDD-GEVDSSDDDDGMPPLQANTNRLRPFGVKCDAETDSGSDS 169

[Close]

BLAST of HG10014710 vs. TAIR 10
Match: AT2G40780.2 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 152.1 bits (383), Expect = 4.0e-37
Identity = 84/136 (61.76%), Postives = 107/136 (78.68%), Query Frame = 0


Query: 40  MDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRE 99
           MDA+GE SLALFPAKF++SMWI+RGSFVV+D +GK+ A ESGSKV  IV +VL+FEQVR 
Sbjct: 1   MDAKGENSLALFPAKFRESMWIRRGSFVVIDHTGKEKAQESGSKVTSIVCKVLFFEQVRL 60

Query: 100 LQKSPEWPEIFKNA--IVGDRNENLQAQNNRQEEDEVAEVDSS-DDDGLPPLEANTNRAK 159
           LQKSPEWPEIFK+   I  +++  ++     Q ED+  EVDSS DDDG+PPL+ANTNR +
Sbjct: 61  LQKSPEWPEIFKDTRPIPAEKSSPIE-----QHEDD-GEVDSSDDDDGMPPLQANTNRLR 120

Query: 160 PLILQPDAESESDSDS 173
           P  ++ DAE++S SDS
Sbjct: 121 PFGVKCDAETDSGSDS 130

[Close]

BLAST of HG10014710 vs. TAIR 10
Match: AT2G40910.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 45.8 bits (107), Expect = 4.0e-05
Identity = 25/59 (42.37%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 1  MKGGRKNLQRASEQHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSM 60
          MK  R++L++A+E   +  E+  S+ QVVS+R S+ +++MD +G+ SLAL PAK    M
Sbjct: 1  MKRRRRDLKQAAE---SEQEECQSVPQVVSLRDSDQLQIMDEKGDNSLALLPAKLPMRM 56

The following BLAST results are available for this feature:

BLAST of HG10014710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891512.1	4.1e-84	95.93	probable RNA-binding protein EIF1AD isoform X1 [Benincasa hispida]	[more]
XP_004146450.1	7.2e-81	94.77	probable RNA-binding protein EIF1AD [Cucumis sativus] >KGN50715.1 hypothetical p...	[more]
XP_023547328.1	7.9e-80	92.44	probable RNA-binding protein EIF1AD [Cucurbita pepo subsp. pepo] >KAG7031527.1 p...	[more]
XP_022991942.1	1.0e-79	91.86	probable RNA-binding protein EIF1AD [Cucurbita maxima]	[more]
XP_022942753.1	5.1e-79	91.28	probable RNA-binding protein EIF1AD [Cucurbita moschata]	[more]

BLAST of HG10014710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7SY07	1.2e-19	37.50	Probable RNA-binding protein EIF1AD OS=Danio rerio OX=7955 GN=eif1ad PE=2 SV=1	[more]
Q8N9N8	8.4e-16	36.36	Probable RNA-binding protein EIF1AD OS=Homo sapiens OX=9606 GN=EIF1AD PE=1 SV=1	[more]
Q4R354	8.4e-16	36.36	Probable RNA-binding protein EIF1AD OS=Macaca fascicularis OX=9541 GN=EIF1AD PE=...	[more]
Q58CY2	2.4e-15	37.16	Probable RNA-binding protein EIF1AD OS=Bos taurus OX=9913 GN=EIF1AD PE=2 SV=1	[more]
Q0V9J5	4.2e-15	35.90	Probable RNA-binding protein EIF1AD OS=Xenopus tropicalis OX=8364 GN=eif1ad PE=2...	[more]

BLAST of HG10014710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM30	3.5e-81	94.77	S1-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G218810 PE=...	[more]
A0A6J1JNB5	5.0e-80	91.86	probable RNA-binding protein EIF1AD OS=Cucurbita maxima OX=3661 GN=LOC111488431 ...	[more]
A0A6J1FVM0	2.5e-79	91.28	probable RNA-binding protein EIF1AD OS=Cucurbita moschata OX=3662 GN=LOC11144769...	[more]
A0A1S3C3W3	7.2e-79	93.02	probable RNA-binding protein EIF1AD OS=Cucumis melo OX=3656 GN=LOC103496721 PE=3...	[more]
A0A5D3DQ84	7.2e-79	93.02	Putative RNA-binding protein EIF1AD OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of HG10014710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40780.1	1.5e-47	59.43	Nucleic acid-binding, OB-fold-like protein	[more]
AT2G40780.2	4.0e-37	61.76	Nucleic acid-binding, OB-fold-like protein	[more]
AT2G40910.1	4.0e-05	42.37	F-box and associated interaction domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 112..132
None	No IPR available	GENE3D	2.40.50.140		coord: 1..144 e-value: 2.8E-28 score: 100.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..172
IPR001253	Translation initiation factor 1A (eIF-1A)	SMART	SM00652	eIF1neu4	coord: 18..107 e-value: 1.0E-29 score: 114.7
IPR006196	RNA-binding domain, S1, IF1 type	PFAM	PF01176	eIF-1a	coord: 23..72 e-value: 2.5E-10 score: 40.0
IPR006196	RNA-binding domain, S1, IF1 type	PROSITE	PS50832	S1_IF1_TYPE	coord: 12..92 score: 9.691042
IPR039294	Probable RNA-binding protein EIF1AD	PANTHER	PTHR21641	TRANSLATION INITIATION FACTOR-RELATED	coord: 1..171
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 13..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10014710.1	HG10014710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003723	RNA binding