HG10014682 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10014682
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	LOB domain-containing protein
Location	Chr02: 17852898 .. 17853940 (+)
RNA-Seq Expression	HG10014682
Synteny	HG10014682

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGCAATTCGCCGTGCGCCTCATGCAAACTCCTCCGGCGACGGTGCGCCAAAGACTGCATTTTTGCTCCCTATTTTCCCTCTGATGACCCCCACAAGTTTGCTCTTGTCCATAAAGTTTTTGGTGCTAGCAATGTCAGCAAAATGTTGCAGGTTCTTCTTCTTCCTTACCTTCTCCATTATTTCGGATTTCGGATTTTGGGTTTTGAGTATATTTTCCAAAAAAAAAAAAAAAAAAAACAATTCATGAACTTATAAAAGAGTTTTTGCCATTCAAACTGTATCCAACAATTTAACACACAAGTTTTCTCTATTATTTAATTTTCGTCTGTTTTTGTTAATATCTTCATTAATATGAGATTTTTCTCCCTAATTAAAGCTTCTTTTACGTTTTAGTGATTTTTTTAAAAAAAACTAAGCTAATTTTTTTTTTTAAAAAAATAGTTCTTAAAATATAATTTTTGTTTTTTAAATTAAGCCTAAGTAAACAAATTAAGAAGATAACTTTTAAAAATTAAAAATAAAAAACAAAATAATTATAAAACGAAACTAAAATAGGAGTTTTCTCTACTAATTTGAAACCCTTTTTCGAGTAGATTAAACCAATTAGAGAACAATAAATTCTTTTTTTTTTCTTTAAAGAAGAAAAAGAATGAATTTTGATATTGATAAATAATATTTAATTATTGAAACAGGAACTGCCAGTGCAGCAAAGAGGCGACGCCGTGATGAGTTTAGTTTATGAGGCAAGTGCAAGAGTGAGGGACCCAGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAATCAAGTCTCGCAGCTACAGATGCAATTGGCTGTGGCTCAAGCTGAGATTCTTTGCATCCAAATGCAGCAAGACCACCCTGTTTTCCCAAATTGCCCTCAGATCCACTCCGATGACAAATCCCCCTCTCTTCTACTCCCGCCGCCGTCTCCTCCGCCGTCTCAGTGCCTCAATTTTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAA

mRNA sequence

ATGGGTGGCAATTCGCCGTGCGCCTCATGCAAACTCCTCCGGCGACGGTGCGCCAAAGACTGCATTTTTGCTCCCTATTTTCCCTCTGATGACCCCCACAAGTTTGCTCTTGTCCATAAAGTTTTTGGTGCTAGCAATGTCAGCAAAATGTTGCAGGAACTGCCAGTGCAGCAAAGAGGCGACGCCGTGATGAGTTTAGTTTATGAGGCAAGTGCAAGAGTGAGGGACCCAGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAATCAAGTCTCGCAGCTACAGATGCAATTGGCTGTGGCTCAAGCTGAGATTCTTTGCATCCAAATGCAGCAAGACCACCCTGTTTTCCCAAATTGCCCTCAGATCCACTCCGATGACAAATCCCCCTCTCTTCTACTCCCGCCGCCGTCTCCTCCGCCGTCTCAGTGCCTCAATTTTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAA

Coding sequence (CDS)

ATGGGTGGCAATTCGCCGTGCGCCTCATGCAAACTCCTCCGGCGACGGTGCGCCAAAGACTGCATTTTTGCTCCCTATTTTCCCTCTGATGACCCCCACAAGTTTGCTCTTGTCCATAAAGTTTTTGGTGCTAGCAATGTCAGCAAAATGTTGCAGGAACTGCCAGTGCAGCAAAGAGGCGACGCCGTGATGAGTTTAGTTTATGAGGCAAGTGCAAGAGTGAGGGACCCAGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAATCAAGTCTCGCAGCTACAGATGCAATTGGCTGTGGCTCAAGCTGAGATTCTTTGCATCCAAATGCAGCAAGACCACCCTGTTTTCCCAAATTGCCCTCAGATCCACTCCGATGACAAATCCCCCTCTCTTCTACTCCCGCCGCCGTCTCCTCCGCCGTCTCAGTGCCTCAATTTTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAA

Protein sequence

MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRGDAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPNCPQIHSDDKSPSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS

Homology

[Close]

BLAST of HG10014682 vs. NCBI nr
Match: XP_038893139.1 (LOB domain-containing protein 12-like [Benincasa hispida])

HSP 1 Score: 337.8 bits (865), Expect = 5.3e-89
Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCA+DCIFAPYFPSDDPHKFA+VHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCARDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKSPSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS 167
           CPQIHSDDK PSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS
Sbjct: 121 CPQIHSDDKPPSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS 166

[Close]

BLAST of HG10014682 vs. NCBI nr
Match: KAA0035899.1 (LOB domain-containing protein 12-like [Cucumis melo var. makuwa] >TYK19054.1 LOB domain-containing protein 12-like [Cucumis melo var. makuwa])

HSP 1 Score: 333.2 bits (853), Expect = 1.3e-87
Identity = 164/167 (98.20%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA+VHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKSPSLLLPPPSPPPSQCLNF-ASSPNVIYDTIFGHDIVS 167
           CPQIHSDDKS SLLLPPPSPPPSQCLNF ASSPNVIYDTIFGHDIVS
Sbjct: 121 CPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 167

[Close]

BLAST of HG10014682 vs. NCBI nr
Match: XP_023536420.1 (LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.8 bits (852), Expect = 1.7e-87
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA+VHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKSPSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS 167
           CPQIHSDDK P+LLLPPPS PPSQCLNFASSPNVIYD IFGHDIVS
Sbjct: 121 CPQIHSDDKPPTLLLPPPSSPPSQCLNFASSPNVIYDAIFGHDIVS 166

[Close]

BLAST of HG10014682 vs. NCBI nr
Match: XP_004148190.1 (LOB domain-containing protein 12 [Cucumis sativus] >KGN50694.1 hypothetical protein Csa_005796 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 4.9e-87
Identity = 163/167 (97.60%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA+VHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKSPSLLLPPPSPPPSQCLNF-ASSPNVIYDTIFGHDIVS 167
           CPQIHSDDK  SLLLPPPSPPPSQCLNF ASSPNVIYDTIFGHDIVS
Sbjct: 121 CPQIHSDDKPSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 167

[Close]

BLAST of HG10014682 vs. NCBI nr
Match: XP_022957028.1 (LOB domain-containing protein 12-like [Cucurbita moschata] >KAG6600910.1 LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031545.1 LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 331.3 bits (848), Expect = 4.9e-87
Identity = 160/166 (96.39%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA+VHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKSPSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS 167
           CPQIHSD+K P+LLLPPPS PPSQCLNFASSPNVIYD IFGHDIVS
Sbjct: 121 CPQIHSDEKPPTLLLPPPSSPPSQCLNFASSPNVIYDAIFGHDIVS 166

[Close]

BLAST of HG10014682 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 211.5 bits (537), Expect = 7.5e-54
Identity = 106/133 (79.70%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 3   GNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRGDA 62
           G+SPCASCKLLRRRCAKDCIFAPYFP DDPHKFA+VHKVFGASNVSKMLQELPV QR DA
Sbjct: 5   GSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADA 64

Query: 63  VMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPNCP 122
           V SLV+EA+ARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ +  +  +  
Sbjct: 65  VNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQ 124

Query: 123 QIHSDDKSPSLLL 136
            +  D    +LLL
Sbjct: 125 VLELDQDHKALLL 137

[Close]

BLAST of HG10014682 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.4e-44
Identity = 88/133 (66.17%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 2   GGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRGD 61
           G  SPCA+CKLLRRRCA+DC+F+PYFP+D+P KFA VH+VFGASNV+KMLQELP+ QRGD
Sbjct: 9   GAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGD 68

Query: 62  AVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQ--DHPVFP 121
           AV S+VYEA+ARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++++Q  + P   
Sbjct: 69  AVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHG 128

Query: 122 NCPQIHSDDKSPS 133
            CP   S   SPS
Sbjct: 129 LCPDSPSSSGSPS 141

[Close]

BLAST of HG10014682 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-36
Identity = 72/111 (64.86%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 5   SPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRGDAVM 64
           SPCA+CK+LRRRCA+ C+ APYFP  DP KF + H+VFGASN+ K LQELP  QR DAV 
Sbjct: 32  SPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 91

Query: 65  SLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDH 116
           S+VYEA AR+RDPVYGC GAI +LQ QVS+LQ QLA AQ E++ +Q Q+ +
Sbjct: 92  SMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQRSN 142

[Close]

BLAST of HG10014682 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 7.0e-36
Identity = 71/109 (65.14%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 5   SPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRGDAVM 64
           SPCA+CK+LRRRCA  C+ APYFP  DP KF + H+VFGASN+ K LQELP  QR DAV 
Sbjct: 54  SPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 113

Query: 65  SLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQ 114
           S+VYEA AR+RDPVYGC GAI +LQ QVS+LQ QLA  Q E++ +Q+Q+
Sbjct: 114 SMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQR 162

[Close]

BLAST of HG10014682 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 9.2e-36
Identity = 72/107 (67.29%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 5   SPCASCKLLRRRCAKD-CIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRGDAV 64
           SPCA CKLLRR+C KD C+FAPYFP+ +P+KFA+VHK+FGASNV+KMLQEL    R DAV
Sbjct: 13  SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAV 72

Query: 65  MSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQ 111
            S+VYEA+AR++DPVYGCVG IS L  Q+  LQ QLA AQAE++ I+
Sbjct: 73  DSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR 119

[Close]

BLAST of HG10014682 vs. ExPASy TrEMBL
Match: A0A5A7T3C6 (LOB domain-containing protein 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold529G00110 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 6.3e-88
Identity = 164/167 (98.20%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA+VHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKSPSLLLPPPSPPPSQCLNF-ASSPNVIYDTIFGHDIVS 167
           CPQIHSDDKS SLLLPPPSPPPSQCLNF ASSPNVIYDTIFGHDIVS
Sbjct: 121 CPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 167

[Close]

BLAST of HG10014682 vs. ExPASy TrEMBL
Match: A0A0A0KP74 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G215140 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.4e-87
Identity = 163/167 (97.60%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA+VHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKSPSLLLPPPSPPPSQCLNF-ASSPNVIYDTIFGHDIVS 167
           CPQIHSDDK  SLLLPPPSPPPSQCLNF ASSPNVIYDTIFGHDIVS
Sbjct: 121 CPQIHSDDKPSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 167

[Close]

BLAST of HG10014682 vs. ExPASy TrEMBL
Match: A0A6J1GZ19 (LOB domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111458522 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.4e-87
Identity = 160/166 (96.39%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA+VHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKSPSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS 167
           CPQIHSD+K P+LLLPPPS PPSQCLNFASSPNVIYD IFGHDIVS
Sbjct: 121 CPQIHSDEKPPTLLLPPPSSPPSQCLNFASSPNVIYDAIFGHDIVS 166

[Close]

BLAST of HG10014682 vs. ExPASy TrEMBL
Match: A0A6J1IJ16 (LOB domain-containing protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC111477301 PE=3 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.2e-86
Identity = 158/166 (95.18%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA+VHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQ+QVSQLQMQLAVAQAEILCIQMQQDHP+FPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQSQVSQLQMQLAVAQAEILCIQMQQDHPIFPN 120

Query: 121 CPQIHSDDKSPSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS 167
           CPQIHSD+K P+LLLPPPS PPSQCLNFASSPNVIYD IFGHDIVS
Sbjct: 121 CPQIHSDEKPPTLLLPPPSSPPSQCLNFASSPNVIYDAIFGHDIVS 166

[Close]

BLAST of HG10014682 vs. ExPASy TrEMBL
Match: A0A6J1FV10 (LOB domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111447102 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.0e-83
Identity = 152/166 (91.57%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRG 60
           MGG SPCASCKLLRRRCAK+CIFAPYFPSDDPHKFA+VHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGGSPCASCKLLRRRCAKECIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEA+ARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQ+EILC QMQQDH VFPN
Sbjct: 61  DAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCFQMQQDHLVFPN 120

Query: 121 CPQIHSDDKSPSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS 167
           CPQI+SD+K PSLLLPPPSPP SQC NFASSPN+IYD IFGHDIVS
Sbjct: 121 CPQIYSDEKPPSLLLPPPSPPRSQCFNFASSPNIIYDAIFGHDIVS 166

[Close]

BLAST of HG10014682 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 211.5 bits (537), Expect = 5.3e-55
Identity = 106/133 (79.70%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 3   GNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRGDA 62
           G+SPCASCKLLRRRCAKDCIFAPYFP DDPHKFA+VHKVFGASNVSKMLQELPV QR DA
Sbjct: 5   GSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADA 64

Query: 63  VMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPNCP 122
           V SLV+EA+ARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ +  +  +  
Sbjct: 65  VNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQ 124

Query: 123 QIHSDDKSPSLLL 136
            +  D    +LLL
Sbjct: 125 VLELDQDHKALLL 137

[Close]

BLAST of HG10014682 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-45
Identity = 88/133 (66.17%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 2   GGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRGD 61
           G  SPCA+CKLLRRRCA+DC+F+PYFP+D+P KFA VH+VFGASNV+KMLQELP+ QRGD
Sbjct: 9   GAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGD 68

Query: 62  AVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQ--DHPVFP 121
           AV S+VYEA+ARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++++Q  + P   
Sbjct: 69  AVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHG 128

Query: 122 NCPQIHSDDKSPS 133
            CP   S   SPS
Sbjct: 129 LCPDSPSSSGSPS 141

[Close]

BLAST of HG10014682 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-37
Identity = 72/111 (64.86%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 5   SPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRGDAVM 64
           SPCA+CK+LRRRCA+ C+ APYFP  DP KF + H+VFGASN+ K LQELP  QR DAV 
Sbjct: 32  SPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 91

Query: 65  SLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDH 116
           S+VYEA AR+RDPVYGC GAI +LQ QVS+LQ QLA AQ E++ +Q Q+ +
Sbjct: 92  SMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQRSN 142

[Close]

BLAST of HG10014682 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 151.8 bits (382), Expect = 5.0e-37
Identity = 71/109 (65.14%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 5   SPCASCKLLRRRCAKDCIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRGDAVM 64
           SPCA+CK+LRRRCA  C+ APYFP  DP KF + H+VFGASN+ K LQELP  QR DAV 
Sbjct: 54  SPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 113

Query: 65  SLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQ 114
           S+VYEA AR+RDPVYGC GAI +LQ QVS+LQ QLA  Q E++ +Q+Q+
Sbjct: 114 SMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQR 162

[Close]

BLAST of HG10014682 vs. TAIR 10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9 )

HSP 1 Score: 151.4 bits (381), Expect = 6.5e-37
Identity = 72/107 (67.29%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 5   SPCASCKLLRRRCAKD-CIFAPYFPSDDPHKFALVHKVFGASNVSKMLQELPVQQRGDAV 64
           SPCA CKLLRR+C KD C+FAPYFP+ +P+KFA+VHK+FGASNV+KMLQEL    R DAV
Sbjct: 13  SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAV 72

Query: 65  MSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQ 111
            S+VYEA+AR++DPVYGCVG IS L  Q+  LQ QLA AQAE++ I+
Sbjct: 73  DSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR 119

The following BLAST results are available for this feature:

BLAST of HG10014682 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893139.1	5.3e-89	98.19	LOB domain-containing protein 12-like [Benincasa hispida]	[more]
KAA0035899.1	1.3e-87	98.20	LOB domain-containing protein 12-like [Cucumis melo var. makuwa] >TYK19054.1 LOB...	[more]
XP_023536420.1	1.7e-87	96.99	LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo]	[more]
XP_004148190.1	4.9e-87	97.60	LOB domain-containing protein 12 [Cucumis sativus] >KGN50694.1 hypothetical prot...	[more]
XP_022957028.1	4.9e-87	96.39	LOB domain-containing protein 12-like [Cucurbita moschata] >KAG6600910.1 LOB dom...	[more]

BLAST of HG10014682 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LBW3	7.5e-54	79.70	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	2.4e-44	66.17	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q9LQR0	1.4e-36	64.86	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q9SK08	7.0e-36	65.14	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q9SA51	9.2e-36	67.29	LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=...	[more]

BLAST of HG10014682 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T3C6	6.3e-88	98.20	LOB domain-containing protein 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0KP74	2.4e-87	97.60	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G215140 PE=3 SV...	[more]
A0A6J1GZ19	2.4e-87	96.39	LOB domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111458...	[more]
A0A6J1IJ16	1.2e-86	95.18	LOB domain-containing protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC11147730...	[more]
A0A6J1FV10	8.0e-83	91.57	LOB domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111447...	[more]

BLAST of HG10014682 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30130.1	5.3e-55	79.70	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	1.7e-45	66.17	LOB domain-containing protein 4	[more]
AT1G07900.1	1.0e-37	64.86	LOB domain-containing protein 1	[more]
AT2G28500.1	5.0e-37	65.14	LOB domain-containing protein 11	[more]
AT1G16530.1	6.5e-37	67.29	ASYMMETRIC LEAVES 2-like 9	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 85..105
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 2..116
None	No IPR available	PANTHER	PTHR31301:SF97	LOB DOMAIN-CONTAINING PROTEIN 12-LIKE	coord: 2..116
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 6..103 e-value: 5.1E-42 score: 142.5
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 5..106 score: 26.615307

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10014682.1	HG10014682.1	mRNA