HG10014636 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10014636
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr02: 16871027 .. 16871248 (-)
RNA-Seq ExpressionHG10014636
SyntenyHG10014636
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCAGAAGCGACTAAAAGAGAAGATTGAGGCGACTGATCATGAAATCGCAAGTATTCGAGTTGACATTCAGAAGTTTCCACTTATGGAAGAAACTATGTCGCCGTTATCAAAGAGTGTTGAACTGTTGAATGTACATGTGGAGAAGCTAAGAAGCACGGACACGGATACAAGACACGGATACGACACGACACGGACACGGCGACACACCATATTTTAA

mRNA sequence

ATGGTGCAGAAGCGACTAAAAGAGAAGATTGAGGCGACTGATCATGAAATCGCAAGTATTCGAGTTGACATTCAGAAGTTTCCACTTATGGAAGAAACTATGTCGCCGTTATCAAAGAGTGTTGAACTGTTGAATGTACATGTGGAGAAGCTAAGAAGCACGGACACGGATACAAGACACGGATACGACACGACACGGACACGGCGACACACCATATTTTAA

Coding sequence (CDS)

ATGGTGCAGAAGCGACTAAAAGAGAAGATTGAGGCGACTGATCATGAAATCGCAAGTATTCGAGTTGACATTCAGAAGTTTCCACTTATGGAAGAAACTATGTCGCCGTTATCAAAGAGTGTTGAACTGTTGAATGTACATGTGGAGAAGCTAAGAAGCACGGACACGGATACAAGACACGGATACGACACGACACGGACACGGCGACACACCATATTTTAA

Protein sequence

MVQKRLKEKIEATDHEIASIRVDIQKFPLMEETMSPLSKSVELLNVHVEKLRSTDTDTRHGYDTTRTRRHTIF
Homology
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BLAST of HG10014636 vs. ExPASy TrEMBL
Match: A0A5A7UKU8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00900 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.5e-04
Identity = 24/50 (48.00%), Postives = 36/50 (72.00%), Query Frame = 0 

Query: 1  MVQKRLKEKIEATDHEIASIRVDIQKFPLMEETMSPLSKSVELLNVHVEK 51
          M QKR++EK+EA D +I+ IRV++ K P +EE +S  +KS+E L +  EK
Sbjct: 1  MAQKRIEEKLEAFDQDISEIRVELHKLPTIEENLSSTAKSIERLGIQAEK 50

The following BLAST results are available for this feature:
BLAST of HG10014636 vs.
Match NameE-valueIdentityDescription
BLAST of HG10014636 vs.
Match NameE-valueIdentityDescription
BLAST of HG10014636 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UKU85.5e-0448.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of HG10014636 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10014636.1HG10014636.1mRNA