HG10014520 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10014520
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ribosomal RNA small subunit methyltransferase NEP1-like
Location	Chr02: 13471660 .. 13477219 (-)
RNA-Seq Expression	HG10014520
Synteny	HG10014520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGCTCAGAAAAGGAGGAAGTCCCAAAGTTCCTCTTCAAAGTTGGCAAGGCTGAAGCAGGAGAGCGTAGAGAATTTAGATGAATTGAAAAATGTAGAAGATGTTAATACGAATGCCAGTTTGTTGGATGTGATGAATGAGAAGCCTCAAGAGCCTCGTGTAATTTTTGTTCTGGATAATGCTCCTTTGCACAAGGGTCTTGTTGGGAAGGTACATGAATTAAATTATTTTTTCCCTCTTATTACATGGAACTATATTTGCAAACACATGATGCACATGAAACTGTTGAGGAAAAATGAGTGTTTTCATATGTGGAGGAATAGCGAGTACAAAGAAAGTCTTGTTACTTGTAGTCAGGATGTATCTATTTTAGTAACAATTACATTATCTATTTATCAATTGTTTTTATTTTATCTTTTAGAAGTGGAAGATTCTTGATTCGTGGAGAGATCAACATTTCCTTCTTAAGCATAAGAAGAATCTTAAAGACTTTAGGCCTGAAAATGTTCGTCAGGTATGTTGATGAAGAGAAATTAGACTGTCGTTTTCTATTATAAATGTTCATGCAATGTTGCTAGTTATAATCTACATTTTGTTCTACTCCACATTTCGAAATTTATCTTGCTCTATGTATAAAAATTCACTGATAAGCTTTCTAGATTGTGTTCTTATCCTCTCTATTACAAATAGATGGGAATAAAACAACATAGAAAAAGAAAGATACCAGAATATTATATATATTGATAACATTTATTTTTTGACAACCGTTACAAAACATTTTATTGATGTTACAAAAAATCATGTTACAAAAAAACTAATACCAACTGTCTTAACTAGGAAACGACCAATAATCCATACAAAAATTCTGATAGAGAGCTCGACCAAAGCAACACCAAGAGAAGAATCTAGACTACCCTTCAAAATGCTATAAAAGAATAGAAACCTTAAACTAAGTTACAGCCTTGATAGAAACCTCATAGATGATATAAATGATAAGCAATGACCAATAAGTCAAACCAAAAGAGAAGAGAAATTCCTAGTTGAAGGAATTACAAAAGATTCTTTTAATGGATCATAAGTTTAGCTAAATCATAAGTTTCCAAAGAAGCCAAAATTCTTACCCCAAGTTAAGGCTAAAAAAGAATGAAGTTTCAAAAAGCCTATGAAGCACGAATACTTCATTGTAAGCAGAGAATTTGTATTGCATATGGATTCTTCTAGTTCTACTTTGAATACGTGTTTGATTCGTGAATTTGTGTCTCCTATTTTTTCTTTTATTAATTTTAGATACCTGTGTCCTCCCCTATATATGTGAAGGGGACACACTATTTTTTTCCATTTAAAGCTTCAACCCAACCCACCCAACCCATCTTTGAAGCCAACAGCTGCCCAACCTAAATCTAACATAGTTAAATTAAAGAAAAAAACAAATAAATTAAAAAGTAAAATCCCTAAACAACAAGCAAACCAACAGACCATCTTCTTCATTCTTCCTCCGTGATTCACGAACAACCAGGTAGCCACCGACCTCGTCCTCTCTATGTGTCACCACCCCCACTGTTGTCCTCCTTTGTTCCCTTTAGCATCGTTGTCACCACTGCTGTTCATAGTGTGTCACCATTTTCCCCTCTTTTTAAATCTTCTTTAATTTAACTTAACTTCAATTAGTATAATTTTGTTAAATTTGCATATATCCTTAAAATGTAAATACGAAAAAATGTATTCTCAACATATCCGAATCTTAGCTTTTTAGAGATTGATGTATCGCCATATCCTATTGTATTTGTATCTGTGTCTGTGCTTCATAGCAAGAAACTAGCAAAAGTCTTCTCTATGCCCTCGAAGATATGATTGTTCCTCTCCTTCCCAATGTACTGAAAGAAAGCTCTTATGAAAATAAGCCGGAGCAGTTCCTTATCCTCTTTGAAATGATGTGCTGAGAATATTAAAGCCACAAAAGTGAAGGGATCACTCGGGGAGGATAAGATCCCAATTAAAAGCCTCCAGAAATTTCTCCCAAAATGTAGATACAAATTGACAGAAGAGAAACAAATGCCTCTGGGTTTCCATTGCCTTCTTAGACATGGAACCCCATCCAGGGTAAGCAAGCTAAAGGGAACTCTTTTGGAGTTTGTCATGGGTGCCGATGCAAGCGTGGCTGAGCTCCCTTCTGAAAAAACTTAATTTTTTGAGATGTTTCCTTTCCATATAGCCTTGAAGATATTGGCATTAGCTTTTGTTCCTGCAGATGCAAGATCAGTGGATAAGGATTTTGTTGAAAAGTAGGCCTTAACCCACAATGTTAGTTCTTCGCCCATTTTGCAATTACAATGACTATAGACAAGGTCTCCATGCTTCAAAGTATGCTTCCTAGGTCCTTTATACGAGGGAGGGAGGGAGAACAAAAATAAACAACACATTGGTTTAAATGACTTAACAAAAATTTGAAGACTTGAGGGAGGGAGGGAGAACAAAAATAAACAACACATTGGTTTAAATGACAATGACTTAACAAACATTCGAAGACCTGAGGGAGGGAGGGAGGGGCCGGCCAACAAAAATAAACAACACATTGGTTTAAATGACTCAACAAACATTCGAAGACCTGAGGGAGGGAGGGAGGGAGGGAGGGGCTGACCAACAAAAATAAACAACACATTGGTTTAAATGACTTAACAAACATTTGAAGACCTAAGATTTAATATCCATGATGGCCACCTACCTAGTGGGTTGGCTTATAAAGCACCGACACTTCTAAACTGACAAAGTGTTGGTGTCGGATACGTGTTGGACACCGACACGCTCCGACATGCCTCTGACATGCCAGCTGGTGTGTCAATTATTTTAGTATTATTTGTTTGCTTTTCGACACGTCAGGACATGCCAAGACACGTCGAGGACACCCCAGCGACCCAGCAAGGACACTCGTGCAAAAGTTTTTTTAAAAAAATAATGAAACAAGAACCACTATCGGCAGCCTATTTAAGGGGCATTTTAAGCTAATTAAAATTAACTGTTCAACCTAACTTTTTCAAAATTCTAGAGTTTTTACACACTTTCGCCATACTAACATGCTTCAGCCTTAAGACTTAATCCACAACTTGTTTCAAAAAAATAAAAAACCCACTATGCTACTTGATTCTTCTTTCTAACTTTATCGATGACGGTGACTTCAACTTCAAGACCCACAACTACCGACAACTTATGTGACTTCTCTTACTGTTTTTTTTCCTTCTGTTTTCATCTTTACTTTTTTTTTTTTTTTTCTGTTTATGTTTTTCTCTTATTTTTTGTTAAACATATGTGCCTATATTTTACAATATGTCAAATTATGCACACACATATTTATTTTTGTAAATAAAAAAAAAAAAAAAAGTGTCTCCAACGTGTCATGTCCTACTTTTTTTGTAAATTGACGTGTCTCTGTGTCGTATTCGTGTCGCATGTCAGTGTCTGTACTTCTTAGGGGTTGGCCTAGTGGTAAAAAAGGAGACAGTATCAATAAATGGCTAAGAGGTTATGAGTTCAATCCATGTGATAGGTATCACTATCAAAGTCTTTATTATAATTCAAAAGTAGTAGATACAAGCAAGATACACTATTCCACAATCTCCCCTCTCCAGAGAGAAAGTTCCTCCTAATACATAAAAACCAGATAATAACCAACTACAACACTGTTAGGCCTCCAATCGTCTATACTTATAAGAGGAAGGGCAAAAACGGGAAATGAGAAGTGAGGTGGAATTAGTTGGTAGTGGGGGAATTACAGTTGAAAGGGTGTTGTGAGGGGGGGACCTCCTCTGGTGATGTGGATAAATAAAGAGTGGCAGAAGAAAGGAAGGGTATGCTGAATATTCTTGTGCAGGCCCTAATTTTGGGAGTGAAAGGAGAGGATCACCAGCTCTCTCTAATGTGCTGGTCCTTAGTTCTATTTCTATATTTTGAGTGTTCTTGCTTCTTGTTTATTTCCTTATTGCTTGAGAACCTTGCTTACTATATTTGAGACTTATTGGATCTTATATATATATATACGTATATCTCAGCAGAGAATTGTATCTTCTATCTTTTTTCTATATACATCTTGTTGGGATTTACTGAGTGCAGGGGTAGATACCTAACAAACACACACAAACATATATATAACTAAACAACTGGATAAAATAACTAGTAATAACTAATTCTTTAACTACTGGTTAATGCTTCCCCTTCCTTAACCACCTCTTTCCCTTTCTTATTTTTCCTAACATATGTGATCAATGTTGGTCGTCTAACACCATGGTCGCCACGTACCTAGGATTTAATATCCTACAAGTTTCCTTGACGCCCAAATGTTAGTAAGGTCAGGCGAGTTGTCCCTTGAGATTAGTCGAGGTGCGCGTAAGCTGGCCCAGACACTCATTGATATTTAAAAAAAAAACACATTCGAAGAGGTTTTGATAAAACTTAACTACTTAAGATTAAGAAATGTGGAAGATTTGGCTTACATTAGATATTCTCCTGTTCGATTGATTGGGTTGTGTTTTTTAATGTATATATTGATGATAACAGTAATAATTGTTTGGAATGTCCAGCCTCTCCTTGACATTTTTGACAGCCGAGTTAATAAAGCTGGAAAAGTAGGCGCTGTTTATGTCAAAATTGATGATGGAGTACTATTTGAAATCAAGCCACATGCTCGTATTCCAAGAACATACAATCGCTTTTGTGGACTGATTTGTAAGTAACATCTCGTTCGTCTATTTACAACTAATAATGATTGCTTAATATCAAGCCACATGCTCGTATTCCAAGAACATACAATCGCTTTTGTGGACTGATTTGTAAGTAACATCTCGTTCGTCTATTTACAACTAATAATGATTGCTTAATCATATGATTTGTTCAATGCTTGCAGTGGACTTGCTAAAGAAGAGATGTATTCGTGCTGAAGATACAAACGAAGTACTTTTTCGTGTCCTCAACGAACCATTGTCTCAACATTTGCCCAGCAACTCTCGTATTATTGGCAAGTATTATACTTTGATGAACTCTATTCTATTTCTAATTCAATTGATTTACTAATACGGAACACTTGAAATATTGGAATTGCAGGTGTCTCTAATGGTTTGGAAAAGCTGGTTGACATACAGGATTATGTTTCTGCTACTAGTGATGATAAGAATCTCATTTTTGTGGTATGTTATATTATATGCTTTTTGTTTCAACTTCTTGAAGTATATTCAAAGTGAAATCTGAAACATGACAGTTTCTTTCTTGTACGTTTGTATAGGTCAGTGCGACAGATCATAAGAAAATTAATATATGTACGGATGACATGATATCGGGTAAATTCTACAATTCTATATATTTCCTTCAAAGATATTTGTTGTTTAAAATTCAATTTAAAAATTTTACTTTTCAATTATTTGTTGGGTTGAAATGCTAATGGCTATTTATTTATTTATTTATTTTTTTGGGTACAGTTTCACAGTATCCGCTGGTGTCCATGAATTGTGTAGGCATGATTTGTGAAGCATTGGAGCATAAATGGATCGTTGAACCTCCTTCACATAACTGA

mRNA sequence

ATGCCTGCTCAGAAAAGGAGGAAGTCCCAAAGTTCCTCTTCAAAGTTGGCAAGGCTGAAGCAGGAGAGCGTAGAGAATTTAGATGAATTGAAAAATGTAGAAGATGTTAATACGAATGCCAGTTTGTTGGATGTGATGAATGAGAAGCCTCAAGAGCCTCGTGTAATTTTTGTTCTGGATAATGCTCCTTTGCACAAGGGTCTTGTTGGGAAGAAGTGGAAGATTCTTGATTCGTGGAGAGATCAACATTTCCTTCTTAAGCATAAGAAGAATCTTAAAGACTTTAGGCCTGAAAATGTTCGTCAGCCTCTCCTTGACATTTTTGACAGCCGAGTTAATAAAGCTGGAAAAGTAGGCGCTGTTTATGTCAAAATTGATGATGGAGTACTATTTGAAATCAAGCCACATGCTCGTATTCCAAGAACATACAATCGCTTTTGTGGACTGATTTTGGACTTGCTAAAGAAGAGATGTATTCGTGCTGAAGATACAAACGAAGTACTTTTTCGTGTCCTCAACGAACCATTGTCTCAACATTTGCCCAGCAACTCTCGTGTCTCTAATGGTTTGGAAAAGCTGGTTGACATACAGGATTATGTTTCTGCTACTAGTGATGATAAGAATCTCATTTTTGTGGTCAGTGCGACAGATCATAAGAAAATTAATATATGTACGGATGACATGATATCGGGCATGATTTGTGAAGCATTGGAGCATAAATGGATCGTTGAACCTCCTTCACATAACTGA

Coding sequence (CDS)

ATGCCTGCTCAGAAAAGGAGGAAGTCCCAAAGTTCCTCTTCAAAGTTGGCAAGGCTGAAGCAGGAGAGCGTAGAGAATTTAGATGAATTGAAAAATGTAGAAGATGTTAATACGAATGCCAGTTTGTTGGATGTGATGAATGAGAAGCCTCAAGAGCCTCGTGTAATTTTTGTTCTGGATAATGCTCCTTTGCACAAGGGTCTTGTTGGGAAGAAGTGGAAGATTCTTGATTCGTGGAGAGATCAACATTTCCTTCTTAAGCATAAGAAGAATCTTAAAGACTTTAGGCCTGAAAATGTTCGTCAGCCTCTCCTTGACATTTTTGACAGCCGAGTTAATAAAGCTGGAAAAGTAGGCGCTGTTTATGTCAAAATTGATGATGGAGTACTATTTGAAATCAAGCCACATGCTCGTATTCCAAGAACATACAATCGCTTTTGTGGACTGATTTTGGACTTGCTAAAGAAGAGATGTATTCGTGCTGAAGATACAAACGAAGTACTTTTTCGTGTCCTCAACGAACCATTGTCTCAACATTTGCCCAGCAACTCTCGTGTCTCTAATGGTTTGGAAAAGCTGGTTGACATACAGGATTATGTTTCTGCTACTAGTGATGATAAGAATCTCATTTTTGTGGTCAGTGCGACAGATCATAAGAAAATTAATATATGTACGGATGACATGATATCGGGCATGATTTGTGAAGCATTGGAGCATAAATGGATCGTTGAACCTCCTTCACATAACTGA

Protein sequence

MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINICTDDMISGMICEALEHKWIVEPPSHN

Homology

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BLAST of HG10014520 vs. NCBI nr
Match: KAA0032138.1 (ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 437.6 bits (1124), Expect = 7.3e-119
Identity = 227/264 (85.98%), Postives = 233/264 (88.26%), Query Frame = 0


Query: 1   MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLD 60
           MP QKRR S+S SSKLAR KQESVENLDELKNVEDV T +SLLD+MNEKPQE RVIFVLD
Sbjct: 1   MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLD 60

Query: 61  NAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGA 120
           NAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF PENVRQPLLDIFDSRVNKAGKVGA
Sbjct: 61  NAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQPLLDIFDSRVNKAGKVGA 120

Query: 121 VYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHL 180
           VYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFR+LNEPLSQHL
Sbjct: 121 VYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRILNEPLSQHL 180

Query: 181 PSNSR---VSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINICTDDMIS------- 240
           PSNSR   VSNGLEKLVDIQ+YVS T DDKN +FVVSATDHKKINIC DDMIS       
Sbjct: 181 PSNSRIIGVSNGLEKLVDIQNYVS-TCDDKNFVFVVSATDHKKINICADDMISVSHYPLV 240

Query: 241 -----GMICEALEHKWIVEPPSHN 250
                GMICEALEHKWIVEP  HN
Sbjct: 241 SMSCVGMICEALEHKWIVEPLLHN 263

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BLAST of HG10014520 vs. NCBI nr
Match: XP_008456875.1 (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo])

HSP 1 Score: 379.0 bits (972), Expect = 3.1e-101
Identity = 191/220 (86.82%), Postives = 195/220 (88.64%), Query Frame = 0


Query: 45  VMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPL 104
           +MNEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF PENVRQPL
Sbjct: 1   MMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQPL 60

Query: 105 LDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDT 164
           LDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDT
Sbjct: 61  LDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDT 120

Query: 165 NEVLFRVLNEPLSQHLPSNSR---VSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKI 224
           NEVLFR+LNEPLSQHLPSNSR   VSNGLEKLVDIQ+YVS T DDKN +FVVSATDHKKI
Sbjct: 121 NEVLFRILNEPLSQHLPSNSRIIGVSNGLEKLVDIQNYVS-TCDDKNFVFVVSATDHKKI 180

Query: 225 NICTDDMIS------------GMICEALEHKWIVEPPSHN 250
           NIC DDMIS            GMICEALEHKWIVEP  HN
Sbjct: 181 NICADDMISVSHYPLVSMSCVGMICEALEHKWIVEPLLHN 219

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BLAST of HG10014520 vs. NCBI nr
Match: XP_038891816.1 (ribosomal RNA small subunit methyltransferase nep-1-like [Benincasa hispida])

HSP 1 Score: 352.8 bits (904), Expect = 2.4e-93
Identity = 181/195 (92.82%), Postives = 184/195 (94.36%), Query Frame = 0


Query: 1   MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLD 60
           M  QKRR S+SSSSKLARLKQE VENLDELKNVEDVNTN+SLLDV+NEKPQE RVIFVLD
Sbjct: 1   MSHQKRRNSESSSSKLARLKQERVENLDELKNVEDVNTNSSLLDVINEKPQEHRVIFVLD 60

Query: 61  NAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGA 120
           NAPLHKGLVGKKWKILDSWRDQ FLLKHKKNLKDF PENVRQPLLDIFDSRVNKAGKVGA
Sbjct: 61  NAPLHKGLVGKKWKILDSWRDQQFLLKHKKNLKDFCPENVRQPLLDIFDSRVNKAGKVGA 120

Query: 121 VYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHL 180
           VYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHL
Sbjct: 121 VYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHL 180

Query: 181 PSNSR---VSNGLEK 193
           P NSR   VSNGLEK
Sbjct: 181 PRNSRIIGVSNGLEK 195

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BLAST of HG10014520 vs. NCBI nr
Match: TYK14383.1 (ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 274.6 bits (701), Expect = 8.2e-70
Identity = 138/159 (86.79%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 103 PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAE 162
           PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAE
Sbjct: 58  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAE 117

Query: 163 DTNEVLFRVLNEPLSQHLPSNSRVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKIN 222
           DTNEVLFR+LNEPLSQHLPSNSRVSNGLEKLVDIQ+YVS T DDKN +FVVSATDHKKIN
Sbjct: 118 DTNEVLFRILNEPLSQHLPSNSRVSNGLEKLVDIQNYVS-TCDDKNFVFVVSATDHKKIN 177

Query: 223 ICTDDMIS------------GMICEALEHKWIVEPPSHN 250
           IC DDMIS            GMICEALEHKWIVEP  HN
Sbjct: 178 ICADDMISVSHYPLVSMSCVGMICEALEHKWIVEPLLHN 215

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BLAST of HG10014520 vs. NCBI nr
Match: CAB4267774.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 232.3 bits (591), Expect = 4.7e-57
Identity = 131/250 (52.40%), Postives = 166/250 (66.40%), Query Frame = 0


Query: 8   KSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKG 67
           +SQ+ SS+   +K +  E  ++   +E    +A+L    N    + R IFV++NA L KG
Sbjct: 14  QSQNCSSRCRTVKPKLEE--EKSTTMEKTEDDATLTLTHNNANDKVRAIFVVENASLTKG 73

Query: 68  LVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDD 127
            V K+WKILDS  D  FLLK KK+L DFRP  V + L  I DS++NKAG VGAVYVK D 
Sbjct: 74  FVRKRWKILDSEEDADFLLKQKKDLNDFRPGRVYEALRAILDSKLNKAGMVGAVYVKTDQ 133

Query: 128 GVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRV- 187
           GVLFEIKPH RIPRT  RFCG+IL+LL  +CIR +DTNE+L RV+ EP+++HLP NSRV 
Sbjct: 134 GVLFEIKPHVRIPRTCKRFCGVILELLGHKCIRDKDTNEILMRVIEEPVTRHLPVNSRVV 193

Query: 188 --SNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKIN-ICTDDMIS------------G 242
             S   EKLVDI +YV++ SD+ NL+FVV A  H KI+   TDD IS            G
Sbjct: 194 GLSYSSEKLVDIDEYVNSGSDELNLVFVVGAMVHGKISKEYTDDFISVSNYPLSAQYCVG 253

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BLAST of HG10014520 vs. ExPASy Swiss-Prot
Match: O35130 (Ribosomal RNA small subunit methyltransferase NEP1 OS=Mus musculus OX=10090 GN=Emg1 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.4e-24
Identity = 64/178 (35.96%), Postives = 99/178 (55.62%), Query Frame = 0


Query: 54  RVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVN 113
           R+I VL+ A L    VGK +++L+  R +  LLK+ ++  + RP+   Q LL + DS +N
Sbjct: 42  RLIVVLEGASLETVKVGKTYELLNCDRHKSMLLKNGRDPGEVRPDITHQSLLMLMDSPLN 101

Query: 114 KAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLN 173
           +AG +  VY+     VL E+ P  RIPRT++RFCGL++ LL K  +RA D  + L +V+ 
Sbjct: 102 RAGLL-QVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIK 161

Query: 174 EPLSQHLPSNSRVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINI-CTDDMIS 231
            P+S H P           + DI D          ++FVV A  H K+++  T+ M+S
Sbjct: 162 NPVSDHFPVGCMKIGTSFSVEDISDIRELVPSSDPVVFVVGAFAHGKVSVEYTEKMVS 218

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BLAST of HG10014520 vs. ExPASy Swiss-Prot
Match: Q9XX15 (Ribosomal RNA small subunit methyltransferase nep-1 OS=Caenorhabditis elegans OX=6239 GN=Y39A1A.14 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.2e-24
Identity = 66/192 (34.38%), Postives = 108/192 (56.25%), Query Frame = 0


Query: 39  NASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPE 98
           NA  +   N+   +  +  VL+   L    VG ++ IL S +  +FL K KK+  D+RP+
Sbjct: 12  NAKRMKTDNQLEDKKILYVVLEGCSLETAKVGGEYAILSSDKHANFLRKQKKDPADYRPD 71

Query: 99  NVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRC 158
            + Q LL++ DS +N+AGK+  V+ +    VL ++ P  RIPRT++RFCGL++ LL K  
Sbjct: 72  ILHQCLLNLLDSPLNRAGKL-RVFFRTSKNVLVDVSPQCRIPRTFDRFCGLMVQLLHKLS 131

Query: 159 IRAEDTNEVLFRVLNEPLSQHLPSNSR---VSNGLEKLVDIQDYVSATSDDKNLIFVVSA 218
           IRA +T + L  V+  P+S HLP  SR   +S  + +L  + + + A   D+ L+ ++  
Sbjct: 132 IRAAETTQKLMSVVKNPVSNHLPVGSRKMLMSFNVPELT-MANKLVAPETDEPLVLIIGG 191

Query: 219 TDHKKINICTDD 228
               KI +  +D
Sbjct: 192 IARGKIVVDYND 201

[Close]

BLAST of HG10014520 vs. ExPASy Swiss-Prot
Match: Q92979 (Ribosomal RNA small subunit methyltransferase NEP1 OS=Homo sapiens OX=9606 GN=EMG1 PE=1 SV=4)

HSP 1 Score: 109.4 bits (272), Expect = 6.0e-23
Identity = 61/178 (34.27%), Postives = 98/178 (55.06%), Query Frame = 0


Query: 54  RVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVN 113
           R+I VL+ A L    VGK +++L+  + +  LLK+ ++  + RP+   Q LL + DS +N
Sbjct: 42  RLIVVLEGASLETVKVGKTYELLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLN 101

Query: 114 KAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLN 173
           +AG +  VY+     VL E+ P  RIPRT++RFCGL++ LL K  +RA D  + L +V+ 
Sbjct: 102 RAGLL-QVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIK 161

Query: 174 EPLSQHLPSNSRVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINI-CTDDMIS 231
            P+S H P           +  + D          ++FVV A  H K+++  T+ M+S
Sbjct: 162 NPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYTEKMVS 218

[Close]

BLAST of HG10014520 vs. ExPASy Swiss-Prot
Match: Q06287 (Ribosomal RNA small subunit methyltransferase NEP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=EMG1 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.1e-22
Identity = 65/181 (35.91%), Postives = 102/181 (56.35%), Query Frame = 0


Query: 54  RVIFVLDNAPL--HK----GLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDI 113
           R+I VL  A L  HK    G  G K+ +L+    Q  L K  +++ + RP+   Q LL +
Sbjct: 40  RMIVVLAMASLETHKISSNGPGGDKYVLLNCDDHQGLLKKMGRDISEARPDITHQCLLTL 99

Query: 114 FDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEV 173
            DS +NKAGK+  VY++   G+L E+ P  RIPRT+ RF GL++ LL K  IR+ ++ E 
Sbjct: 100 LDSPINKAGKL-QVYIQTSRGILIEVNPTVRIPRTFKRFSGLMVQLLHKLSIRSVNSEEK 159

Query: 174 LFRVLNEPLSQHLPSNSR-VSNGLE-KLVDIQDYVSATSDDKNLIFVVSATDHKKINICT 227
           L +V+  P++ HLP+  R V+   +  ++ +QDY+    DD+++   V A    K N   
Sbjct: 160 LLKVIKNPITDHLPTKCRKVTLSFDAPVIRVQDYIEKLDDDESICVFVGAMARGKDNFAD 219

[Close]

BLAST of HG10014520 vs. ExPASy Swiss-Prot
Match: Q9P8P7 (Ribosomal RNA small subunit methyltransferase NEP1 OS=Candida albicans OX=5476 GN=NEP1 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.6e-22
Identity = 64/181 (35.36%), Postives = 103/181 (56.91%), Query Frame = 0


Query: 54  RVIFVLDNAPLHK------GLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDI 113
           R+I VL  A L        G  G ++ +L+    Q  L K  +++ + RP+   Q LL +
Sbjct: 55  RLIVVLSQACLETYKMNSGGPGGDRFALLNCDDHQGLLRKMGRDIAEARPDITHQCLLTL 114

Query: 114 FDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEV 173
            DS +NKAG++  VY++   GVL E+ P  RIPRT+ RF GL++ LL K  IR+E++ EV
Sbjct: 115 LDSPINKAGRL-QVYIQTARGVLIEVNPSVRIPRTFKRFSGLMVQLLHKLSIRSENSKEV 174

Query: 174 LFRVLNEPLSQHLPSNSR-VSNGLE-KLVDIQDYVSATSDDKNLIFVVSATDHKKINICT 227
           L +V+  P++ HLP+  R V+   + +L  +QDYV+   +++++   V A    K N   
Sbjct: 175 LLKVIKNPITDHLPTKCRKVTLSFDAELKRVQDYVTTLDENESICVFVGAMARGKDNFAD 234

[Close]

BLAST of HG10014520 vs. ExPASy TrEMBL
Match: A0A5A7SNC0 (Ribosomal RNA small subunit methyltransferase NEP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00430 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.6e-119
Identity = 227/264 (85.98%), Postives = 233/264 (88.26%), Query Frame = 0


Query: 1   MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLD 60
           MP QKRR S+S SSKLAR KQESVENLDELKNVEDV T +SLLD+MNEKPQE RVIFVLD
Sbjct: 1   MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLD 60

Query: 61  NAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGA 120
           NAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF PENVRQPLLDIFDSRVNKAGKVGA
Sbjct: 61  NAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQPLLDIFDSRVNKAGKVGA 120

Query: 121 VYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHL 180
           VYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFR+LNEPLSQHL
Sbjct: 121 VYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRILNEPLSQHL 180

Query: 181 PSNSR---VSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINICTDDMIS------- 240
           PSNSR   VSNGLEKLVDIQ+YVS T DDKN +FVVSATDHKKINIC DDMIS       
Sbjct: 181 PSNSRIIGVSNGLEKLVDIQNYVS-TCDDKNFVFVVSATDHKKINICADDMISVSHYPLV 240

Query: 241 -----GMICEALEHKWIVEPPSHN 250
                GMICEALEHKWIVEP  HN
Sbjct: 241 SMSCVGMICEALEHKWIVEPLLHN 263

[Close]

BLAST of HG10014520 vs. ExPASy TrEMBL
Match: A0A1S3C5G9 (ribosomal RNA small subunit methyltransferase NEP1-like OS=Cucumis melo OX=3656 GN=LOC103496687 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.5e-101
Identity = 191/220 (86.82%), Postives = 195/220 (88.64%), Query Frame = 0


Query: 45  VMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPL 104
           +MNEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF PENVRQPL
Sbjct: 1   MMNEKPQESRVIFVLDNAPLHKGLVGKKWKILDSWRDHQFLLKHKKNLKDFCPENVRQPL 60

Query: 105 LDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDT 164
           LDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDT
Sbjct: 61  LDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDT 120

Query: 165 NEVLFRVLNEPLSQHLPSNSR---VSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKI 224
           NEVLFR+LNEPLSQHLPSNSR   VSNGLEKLVDIQ+YVS T DDKN +FVVSATDHKKI
Sbjct: 121 NEVLFRILNEPLSQHLPSNSRIIGVSNGLEKLVDIQNYVS-TCDDKNFVFVVSATDHKKI 180

Query: 225 NICTDDMIS------------GMICEALEHKWIVEPPSHN 250
           NIC DDMIS            GMICEALEHKWIVEP  HN
Sbjct: 181 NICADDMISVSHYPLVSMSCVGMICEALEHKWIVEPLLHN 219

[Close]

BLAST of HG10014520 vs. ExPASy TrEMBL
Match: A0A5D3CR92 (Ribosomal RNA small subunit methyltransferase NEP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00200 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 4.0e-70
Identity = 138/159 (86.79%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 103 PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAE 162
           PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAE
Sbjct: 58  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAE 117

Query: 163 DTNEVLFRVLNEPLSQHLPSNSRVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKIN 222
           DTNEVLFR+LNEPLSQHLPSNSRVSNGLEKLVDIQ+YVS T DDKN +FVVSATDHKKIN
Sbjct: 118 DTNEVLFRILNEPLSQHLPSNSRVSNGLEKLVDIQNYVS-TCDDKNFVFVVSATDHKKIN 177

Query: 223 ICTDDMIS------------GMICEALEHKWIVEPPSHN 250
           IC DDMIS            GMICEALEHKWIVEP  HN
Sbjct: 178 ICADDMISVSHYPLVSMSCVGMICEALEHKWIVEPLLHN 215

[Close]

BLAST of HG10014520 vs. ExPASy TrEMBL
Match: A0A6J5TWQ3 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS10640 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 2.3e-57
Identity = 131/250 (52.40%), Postives = 166/250 (66.40%), Query Frame = 0


Query: 8   KSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKG 67
           +SQ+ SS+   +K +  E  ++   +E    +A+L    N    + R IFV++NA L KG
Sbjct: 14  QSQNCSSRCRTVKPKLEE--EKSTTMEKTEDDATLTLTHNNANDKVRAIFVVENASLTKG 73

Query: 68  LVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDD 127
            V K+WKILDS  D  FLLK KK+L DFRP  V + L  I DS++NKAG VGAVYVK D 
Sbjct: 74  FVRKRWKILDSEEDADFLLKQKKDLNDFRPGRVYEALRAILDSKLNKAGMVGAVYVKTDQ 133

Query: 128 GVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRV- 187
           GVLFEIKPH RIPRT  RFCG+IL+LL  +CIR +DTNE+L RV+ EP+++HLP NSRV 
Sbjct: 134 GVLFEIKPHVRIPRTCKRFCGVILELLGHKCIRDKDTNEILMRVIEEPVTRHLPVNSRVV 193

Query: 188 --SNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKIN-ICTDDMIS------------G 242
             S   EKLVDI +YV++ SD+ NL+FVV A  H KI+   TDD IS            G
Sbjct: 194 GLSYSSEKLVDIDEYVNSGSDELNLVFVVGAMVHGKISKEYTDDFISVSNYPLSAQYCVG 253

[Close]

BLAST of HG10014520 vs. ExPASy TrEMBL
Match: A0A251RJG5 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G569200 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-56
Identity = 130/254 (51.18%), Postives = 164/254 (64.57%), Query Frame = 0


Query: 5   KRRKSQSSSSKLARLKQESVE-NLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAP 64
           +R++ + S S+L      +V+  L+E        T   +    N    + R IFV++NA 
Sbjct: 3   RRKREEMSQSQLQNCSSRTVKPKLEEKSTTTMEKTEDDVTLTHNNANDKVRAIFVVENAS 62

Query: 65  LHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYV 124
           L KG V K+WKILDS  D  FLLK KK+L DFRP  V + L  I DS++NKAG VGAVYV
Sbjct: 63  LTKGFVRKRWKILDSEEDADFLLKQKKDLNDFRPGRVYEALRAILDSKLNKAGMVGAVYV 122

Query: 125 KIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSN 184
           K D GVLFEIKPH RIPRT  RFCG+IL+LL  +CIR +DTNE+L RV+ EP+++HLP N
Sbjct: 123 KTDQGVLFEIKPHVRIPRTCKRFCGVILELLGHKCIRDKDTNEILMRVVEEPVTRHLPVN 182

Query: 185 SRV---SNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKIN-ICTDDMIS--------- 242
           SRV   S   EKLVDI +YV++ SD+ NL+FVV A  H KI+   TDD IS         
Sbjct: 183 SRVVGLSYSSEKLVDIDEYVNSGSDELNLVFVVGAMVHGKISKEYTDDFISVSNYPLSAQ 242

[Close]

BLAST of HG10014520 vs. TAIR 10
Match: AT3G57000.1 (nucleolar essential protein-related )

HSP 1 Score: 152.5 bits (384), Expect = 4.4e-37
Identity = 99/266 (37.22%), Postives = 152/266 (57.14%), Query Frame = 0


Query: 4   QKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLL--DVMNEKP--------QEP 63
           ++++K++ SS K    K+ES    +E  + E+V   A+    D++   P        ++ 
Sbjct: 33  EQKQKARESSKK---AKKESTSRAEEDNDEEEVTVEATAAAEDIVGGIPIVLNAPNKEKS 92

Query: 64  RVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVN 123
            ++FVL+ A L    VGK +++L+S    +FL K+ +N  D+RP+   Q LL I DS VN
Sbjct: 93  GIVFVLEKASLEVAKVGKTYQLLNSDDHANFLKKNNRNPADYRPDITHQALLMILDSPVN 152

Query: 124 KAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLN 183
           KAG++ AVYV+ + GVLFE+KPH RIPRT+ RF G++L LL+K  I A ++ E L R + 
Sbjct: 153 KAGRLKAVYVRTEKGVLFEVKPHVRIPRTFKRFAGIMLQLLQKLSITAVNSREKLLRCVK 212

Query: 184 EPLSQ-HLPSNSR---VSNGLEKLVDIQDYVSAT-SDDKNLIFVVSATDHKKINI-CTDD 242
            P+ + HLP NS     S+  EKLV++Q +++    DD++ +FVV A  H KI+    D+
Sbjct: 213 NPIEEHHLPVNSHRIGFSHSSEKLVNMQKHLATVCDDDRDTVFVVGAMAHGKIDCNYIDE 272

The following BLAST results are available for this feature:

BLAST of HG10014520 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032138.1	7.3e-119	85.98	ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo var. makuw...	[more]
XP_008456875.1	3.1e-101	86.82	PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo...	[more]
XP_038891816.1	2.4e-93	92.82	ribosomal RNA small subunit methyltransferase nep-1-like [Benincasa hispida]	[more]
TYK14383.1	8.2e-70	86.79	ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo var. makuw...	[more]
CAB4267774.1	4.7e-57	52.40	unnamed protein product [Prunus armeniaca]	[more]

BLAST of HG10014520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O35130	2.4e-24	35.96	Ribosomal RNA small subunit methyltransferase NEP1 OS=Mus musculus OX=10090 GN=E...	[more]
Q9XX15	3.2e-24	34.38	Ribosomal RNA small subunit methyltransferase nep-1 OS=Caenorhabditis elegans OX...	[more]
Q92979	6.0e-23	34.27	Ribosomal RNA small subunit methyltransferase NEP1 OS=Homo sapiens OX=9606 GN=EM...	[more]
Q06287	5.1e-22	35.91	Ribosomal RNA small subunit methyltransferase NEP1 OS=Saccharomyces cerevisiae (...	[more]
Q9P8P7	6.6e-22	35.36	Ribosomal RNA small subunit methyltransferase NEP1 OS=Candida albicans OX=5476 G...	[more]

BLAST of HG10014520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SNC0	3.6e-119	85.98	Ribosomal RNA small subunit methyltransferase NEP1-like OS=Cucumis melo var. mak...	[more]
A0A1S3C5G9	1.5e-101	86.82	ribosomal RNA small subunit methyltransferase NEP1-like OS=Cucumis melo OX=3656 ...	[more]
A0A5D3CR92	4.0e-70	86.79	Ribosomal RNA small subunit methyltransferase NEP1-like OS=Cucumis melo var. mak...	[more]
A0A6J5TWQ3	2.3e-57	52.40	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS10640 PE=3 S...	[more]
A0A251RJG5	1.1e-56	51.18	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G569200 PE=3 SV=1	[more]

BLAST of HG10014520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57000.1	4.4e-37	37.22	nucleolar essential protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 16..36
None	No IPR available	PANTHER	PTHR12636:SF13	NUCLEOLAR ESSENTIAL-RELATED-LIKE PROTEIN	coord: 32..242
IPR005304	Ribosomal biogenesis, methyltransferase, EMG1/NEP1	PFAM	PF03587	EMG1	coord: 57..230 e-value: 1.0E-34 score: 120.0
IPR005304	Ribosomal biogenesis, methyltransferase, EMG1/NEP1	PANTHER	PTHR12636	NEP1/MRA1	coord: 32..242
IPR005304	Ribosomal biogenesis, methyltransferase, EMG1/NEP1	CDD	cd18088	Nep1-like	coord: 55..238 e-value: 4.83402E-53 score: 168.477
IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	GENE3D	3.40.1280.10		coord: 55..243 e-value: 5.5E-49 score: 168.3
IPR029028	Alpha/beta knot methyltransferases	SUPERFAMILY	75217	alpha/beta knot	coord: 43..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10014520.1	HG10014520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070475	rRNA base methylation
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0070037	rRNA (pseudouridine) methyltransferase activity