Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCGCTTGGAGACGATCCTCTAGTACCTCCTCGGAACAACGTTCAGCAAAATGGAGATCAGCAACCACAGCAACAACCTGCTATAGACCAACGAAACTCCATCTTCATAGCAGATGATAGAGATAGAGCAATCAGAGACTATGTTGCGCCTGCATTTCAAACTTTAGACACTGGCATCCTCGACCAACCAATAGATGCGCTCACATTTGAAATGAAACCGTTGATGTTTCAAATGTTGAACTCATTTGGTCAATTTCCCATACTACCCAATGAAGACCCCCACAAACATCTCAATCTTTTTATGAGAATGTGTCGTTATTGTAAAGTTAATGGTGTTTCTGAAGAGGCATTAAGATTTAAGTTGTTTCCTTACTCTTTGCAGGGAGACGCAGAAGCATGGCTTGATTCATTGCAGCCTAATTCCATCACCACATGGGATAACCTCGTGGACAAATTTATAGAAAAATACTTCTCACTAAACAAGAATACTAAGTACAGAGGTGATATCATCGCTTTCAGGCAAGCACCATCAGAATCTGTAGATGGAGCTTAG
mRNA sequence
ATGGATCCGCTTGGAGACGATCCTCTAGTACCTCCTCGGAACAACGTTCAGCAAAATGGAGATCAGCAACCACAGCAACAACCTGCTATAGACCAACGAAACTCCATCTTCATAGCAGATGATAGAGATAGAGCAATCAGAGACTATGTTGCGCCTGCATTTCAAACTTTAGACACTGGCATCCTCGACCAACCAATAGATGCGCTCACATTTGAAATGAAACCGTTGATGTTTCAAATGTTGAACTCATTTGGTCAATTTCCCATACTACCCAATGAAGACCCCCACAAACATCTCAATCTTTTTATGAGAATGTGTCGTTATTGTAAAGTTAATGGTGTTTCTGAAGAGGCATTAAGATTTAAGTTGTTTCCTTACTCTTTGCAGGGAGACGCAGAAGCATGGCTTGATTCATTGCAGCCTAATTCCATCACCACATGGGATAACCTCGTGGACAAATTTATAGAAAAATACTTCTCACTAAACAAGAATACTAAGTACAGAGGTGATATCATCGCTTTCAGGCAAGCACCATCAGAATCTGTAGATGGAGCTTAG
Coding sequence (CDS)
ATGGATCCGCTTGGAGACGATCCTCTAGTACCTCCTCGGAACAACGTTCAGCAAAATGGAGATCAGCAACCACAGCAACAACCTGCTATAGACCAACGAAACTCCATCTTCATAGCAGATGATAGAGATAGAGCAATCAGAGACTATGTTGCGCCTGCATTTCAAACTTTAGACACTGGCATCCTCGACCAACCAATAGATGCGCTCACATTTGAAATGAAACCGTTGATGTTTCAAATGTTGAACTCATTTGGTCAATTTCCCATACTACCCAATGAAGACCCCCACAAACATCTCAATCTTTTTATGAGAATGTGTCGTTATTGTAAAGTTAATGGTGTTTCTGAAGAGGCATTAAGATTTAAGTTGTTTCCTTACTCTTTGCAGGGAGACGCAGAAGCATGGCTTGATTCATTGCAGCCTAATTCCATCACCACATGGGATAACCTCGTGGACAAATTTATAGAAAAATACTTCTCACTAAACAAGAATACTAAGTACAGAGGTGATATCATCGCTTTCAGGCAAGCACCATCAGAATCTGTAGATGGAGCTTAG
Protein sequence
MDPLGDDPLVPPRNNVQQNGDQQPQQQPAIDQRNSIFIADDRDRAIRDYVAPAFQTLDTGILDQPIDALTFEMKPLMFQMLNSFGQFPILPNEDPHKHLNLFMRMCRYCKVNGVSEEALRFKLFPYSLQGDAEAWLDSLQPNSITTWDNLVDKFIEKYFSLNKNTKYRGDIIAFRQAPSESVDGA
Homology
BLAST of HG10014501 vs. NCBI nr
Match:
XP_024027611.1 (uncharacterized protein LOC112093437 [Morus notabilis])
HSP 1 Score: 167.5 bits (423), Expect = 1.1e-37
Identity = 77/147 (52.38%), Postives = 101/147 (68.71%), Query Frame = 0
Query: 36 IFIADDRDRAIRDYVAPAFQTLDTGILDQPIDALTFEMKPLMFQMLNSFGQFPILPNEDP 95
+ IA+DRDRAIRDY P L GI+ I A FE+KP+MFQML + GQF ++ +DP
Sbjct: 50 VVIAEDRDRAIRDYAIPMLDGLHPGIVRPEIQATKFELKPVMFQMLQTVGQFSVMITDDP 109
Query: 96 HKHLNLFMRMCRYCKVNGVSEEALRFKLFPYSLQGDAEAWLDSLQPNSITTWDNLVDKFI 155
H HL LF+ +C K GV+EEALR KLFPYSL+ A AWL+SL P+S+ W++L +KF+
Sbjct: 110 HMHLRLFIEVCEAFKAPGVTEEALRLKLFPYSLRDRARAWLNSLPPDSVANWNDLAEKFL 169
Query: 156 EKYFSLNKNTKYRGDIIAFRQAPSESV 183
KYF NKN K R DI +F+Q E++
Sbjct: 170 VKYFPPNKNAKLRNDITSFQQLEGEAL 196
BLAST of HG10014501 vs. NCBI nr
Match:
ERM93404.1 (hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda])
HSP 1 Score: 165.6 bits (418), Expect = 4.0e-37
Identity = 76/152 (50.00%), Postives = 104/152 (68.42%), Query Frame = 0
Query: 34 NSIFIADDRDRAIRDYVAPAFQTLDTGILDQPIDALTFEMKPLMFQMLNSFGQFPILPNE 93
N I +ADDR RAIR+Y AP F L+ GI+ I A FE+KP+MFQML + GQF +P E
Sbjct: 11 NPIILADDRARAIREYAAPMFNELNPGIVRPEIQAPQFELKPVMFQMLQTVGQFSGMPTE 70
Query: 94 DPHKHLNLFMRMCRYCKVNGVSEEALRFKLFPYSLQGDAEAWLDSLQPNSITTWDNLVDK 153
DPH HL F+ + K+ GVSEE LR KLFP+SL+ A +WL++L P+S+T W++L +K
Sbjct: 71 DPHLHLRSFLEVSDSFKIQGVSEEVLRLKLFPFSLRDRARSWLNTLPPDSVTNWNDLAEK 130
Query: 154 FIEKYFSLNKNTKYRGDIIAFRQAPSESVDGA 186
F+ KYF +N K+R +I++F+Q ES A
Sbjct: 131 FLRKYFPPTRNAKFRSEIMSFQQLEDESTSDA 162
BLAST of HG10014501 vs. NCBI nr
Match:
XP_017233063.1 (PREDICTED: uncharacterized protein LOC108207110 [Daucus carota subsp. sativus])
HSP 1 Score: 164.9 bits (416), Expect = 6.8e-37
Identity = 77/146 (52.74%), Postives = 100/146 (68.49%), Query Frame = 0
Query: 37 FIADDRDRAIRDYVAPAFQTLDTGILDQPIDALTFEMKPLMFQMLNSFGQFPILPNEDPH 96
FI DD+DRAIR Y AP F+ L++GI+ I A FE+KP+MFQML + GQF +P EDPH
Sbjct: 53 FIVDDKDRAIRQYAAPRFEELNSGIIRPNIQATQFELKPVMFQMLQTIGQFSGMPTEDPH 112
Query: 97 KHLNLFMRMCRYCKVNGVSEEALRFKLFPYSLQGDAEAWLDSLQPNSITTWDNLVDKFIE 156
HL LFM + K GV E+ALR KLFPYS++ A WL+SL S+TTW++L +KF+
Sbjct: 113 LHLRLFMEISDSFKFQGVPEDALRLKLFPYSVRDRARTWLNSLPAGSVTTWNDLTEKFLS 172
Query: 157 KYFSLNKNTKYRGDIIAFRQAPSESV 183
KYF N N K R +I +F+Q ES+
Sbjct: 173 KYFPPNMNAKLRNEINSFQQQDDESL 198
BLAST of HG10014501 vs. NCBI nr
Match:
XP_030497803.1 (uncharacterized protein LOC115713460 [Cannabis sativa])
HSP 1 Score: 164.5 bits (415), Expect = 8.9e-37
Identity = 77/157 (49.04%), Postives = 108/157 (68.79%), Query Frame = 0
Query: 29 AIDQRNSIFIADDRDRAIRDYVAPAFQTLDTGILDQPIDALTFEMKPLMFQMLNSFGQFP 88
A ++ N I +ADDR RAIR+Y AP F L+ GI+ I A FE+KP+MFQML + GQF
Sbjct: 10 AHNEANPIALADDRTRAIREYAAPMFNELNPGIVRPEIQAPHFELKPVMFQMLQTVGQFG 69
Query: 89 ILPNEDPHKHLNLFMRMCRYCKVNGVSEEALRFKLFPYSLQGDAEAWLDSLQPNSITTWD 148
P EDPH H+ F+ + K+ GVSEEALR KLFP+SL+ A AWL++L P+S+T W+
Sbjct: 70 GSPTEDPHLHIRSFLEVSDSFKLQGVSEEALRLKLFPFSLRDRARAWLNTLPPDSVTNWN 129
Query: 149 NLVDKFIEKYFSLNKNTKYRGDIIAFRQAPSESVDGA 186
+L +KF+ KYF +N K+R +I++F+Q+ E+ A
Sbjct: 130 DLAEKFLRKYFPPTRNAKFRSEIMSFQQSEDETTSDA 166
BLAST of HG10014501 vs. NCBI nr
Match:
XP_030508936.1 (uncharacterized protein LOC115723589 [Cannabis sativa])
HSP 1 Score: 162.5 bits (410), Expect = 3.4e-36
Identity = 76/155 (49.03%), Postives = 106/155 (68.39%), Query Frame = 0
Query: 31 DQRNSIFIADDRDRAIRDYVAPAFQTLDTGILDQPIDALTFEMKPLMFQMLNSFGQFPIL 90
++ N I +ADDR RAIR+Y AP F L+ GI+ I A FE+KP+MFQML + GQF
Sbjct: 47 NEANPIALADDRARAIREYAAPMFNELNPGIVRPEIQAPHFELKPVMFQMLQTVGQFGGS 106
Query: 91 PNEDPHKHLNLFMRMCRYCKVNGVSEEALRFKLFPYSLQGDAEAWLDSLQPNSITTWDNL 150
P EDPH H+ F+ + K+ GVSEEALR KLFP+SL+ A AWL++L P+S+T W++L
Sbjct: 107 PTEDPHLHIRSFLEVSDSFKLQGVSEEALRLKLFPFSLRDRARAWLNTLPPDSVTNWNDL 166
Query: 151 VDKFIEKYFSLNKNTKYRGDIIAFRQAPSESVDGA 186
+KF+ KYF +N K+R +I++F+Q E+ A
Sbjct: 167 AEKFLRKYFPPTRNAKFRSEIMSFQQLEDETTSDA 201
BLAST of HG10014501 vs. ExPASy TrEMBL
Match:
U5CUI2 (Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMTR_s04947p00003620 PE=4 SV=1)
HSP 1 Score: 165.6 bits (418), Expect = 1.9e-37
Identity = 76/152 (50.00%), Postives = 104/152 (68.42%), Query Frame = 0
Query: 34 NSIFIADDRDRAIRDYVAPAFQTLDTGILDQPIDALTFEMKPLMFQMLNSFGQFPILPNE 93
N I +ADDR RAIR+Y AP F L+ GI+ I A FE+KP+MFQML + GQF +P E
Sbjct: 11 NPIILADDRARAIREYAAPMFNELNPGIVRPEIQAPQFELKPVMFQMLQTVGQFSGMPTE 70
Query: 94 DPHKHLNLFMRMCRYCKVNGVSEEALRFKLFPYSLQGDAEAWLDSLQPNSITTWDNLVDK 153
DPH HL F+ + K+ GVSEE LR KLFP+SL+ A +WL++L P+S+T W++L +K
Sbjct: 71 DPHLHLRSFLEVSDSFKIQGVSEEVLRLKLFPFSLRDRARSWLNTLPPDSVTNWNDLAEK 130
Query: 154 FIEKYFSLNKNTKYRGDIIAFRQAPSESVDGA 186
F+ KYF +N K+R +I++F+Q ES A
Sbjct: 131 FLRKYFPPTRNAKFRSEIMSFQQLEDESTSDA 162
BLAST of HG10014501 vs. ExPASy TrEMBL
Match:
A0A6J1E251 (uncharacterized protein LOC111025302 OS=Momordica charantia OX=3673 GN=LOC111025302 PE=4 SV=1)
HSP 1 Score: 152.5 bits (384), Expect = 1.7e-33
Identity = 82/187 (43.85%), Postives = 116/187 (62.03%), Query Frame = 0
Query: 1 MDPLGDDPLVPPRNNVQQNGDQQPQQ--QPAIDQRNSIFIADDRDRAIRDYVAPAFQTLD 60
M+ DP PP N NGD ++ + N I +AD+RD A+R+YV AF L+
Sbjct: 1 MNRNAQDP--PPPQNPPVNGDMAGEEAANRVGEIPNLILLADNRDVAMRNYVTHAFHNLN 60
Query: 61 TGILDQPIDALTFEMKPLMFQMLNSFGQFPILPNEDPHKHLNLFMRMCRYCKVNGVSEEA 120
+GI + A FE+KP+MFQ+L + GQF L NEDP+ HL F+ + ++ G SE+A
Sbjct: 61 SGINNPLPQAAQFELKPVMFQILQTMGQFGGLTNEDPYSHLKSFIEIANAFQLPGNSEDA 120
Query: 121 LRFKLFPYSLQGDAEAWLDSLQPNSITTWDNLVDKFIEKYFSLNKNTKYRGDIIAFRQAP 180
LR K+FP+SL+ A W+++L+PNSI TW L DKF+ KY +L KN R DI++FRQ
Sbjct: 121 LRLKMFPFSLRDGARTWINALEPNSINTWAELTDKFLAKYHTLTKNADLREDIVSFRQKE 180
Query: 181 SESVDGA 186
+E+V A
Sbjct: 181 NEAVQEA 185
BLAST of HG10014501 vs. ExPASy TrEMBL
Match:
A0A6J1H7E4 (uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC111461168 PE=4 SV=1)
HSP 1 Score: 149.1 bits (375), Expect = 1.9e-32
Identity = 68/152 (44.74%), Postives = 103/152 (67.76%), Query Frame = 0
Query: 34 NSIFIADDRDRAIRDYVAPAFQTLDTGILDQPIDALTFEMKPLMFQMLNSFGQFPILPNE 93
N+I +ADDR+RAIR Y PA L+ I+ + A TFE+KP+MFQML + GQF LP+E
Sbjct: 31 NAIQLADDRERAIRAYAHPAVDELNPCIIRPEMQATTFELKPVMFQMLQTIGQFHGLPSE 90
Query: 94 DPHKHLNLFMRMCRYCKVNGVSEEALRFKLFPYSLQGDAEAWLDSLQPNSITTWDNLVDK 153
DPH HL F+ + + GV ++ +R LFPYSL+ A++WL++L P +I +W++L +K
Sbjct: 91 DPHLHLKSFLGVSDSFRFQGVDKDVIRLSLFPYSLRDGAKSWLNTLAPRTIDSWNSLAEK 150
Query: 154 FIEKYFSLNKNTKYRGDIIAFRQAPSESVDGA 186
F+ KYF +N ++R +I+AF+Q E++ A
Sbjct: 151 FLIKYFPPTRNARFRNEIVAFQQFEDETLSEA 182
BLAST of HG10014501 vs. ExPASy TrEMBL
Match:
A0A6J1DY39 (uncharacterized protein LOC111025653 OS=Momordica charantia OX=3673 GN=LOC111025653 PE=4 SV=1)
HSP 1 Score: 147.1 bits (370), Expect = 7.1e-32
Identity = 70/153 (45.75%), Postives = 104/153 (67.97%), Query Frame = 0
Query: 34 NSIFIADDRDRAIRDYVAPAFQTLDTGILDQ-PIDALTFEMKPLMFQMLNSFGQFPILPN 93
N I +AD RDRA+RDY A + L++ +++ P DA FE KP+M QMLN+ GQF L +
Sbjct: 8 NPIHVADQRDRAMRDYAAXILEDLNSSVINSFPADA-KFEFKPMMLQMLNNIGQFGGLEH 67
Query: 94 EDPHKHLNLFMRMCRYCKVNGVSEEALRFKLFPYSLQGDAEAWLDSLQPNSITTWDNLVD 153
EDP HL F+++ ++ G+S++ALR LFP+S+ G A AWL++ ++ITTW ++VD
Sbjct: 68 EDPRSHLKSFIKVANTFRLPGISDDALRLTLFPFSVSGQATAWLNAFPSDTITTWSDMVD 127
Query: 154 KFIEKYFSLNKNTKYRGDIIAFRQAPSESVDGA 186
KF+ KYF +N R +II+FRQ +E+V+ A
Sbjct: 128 KFLVKYFPPTRNADVREEIISFRQKENEAVNVA 159
BLAST of HG10014501 vs. ExPASy TrEMBL
Match:
A0A6J1DSZ5 (uncharacterized protein LOC111024107 OS=Momordica charantia OX=3673 GN=LOC111024107 PE=4 SV=1)
HSP 1 Score: 146.0 bits (367), Expect = 1.6e-31
Identity = 70/153 (45.75%), Postives = 102/153 (66.67%), Query Frame = 0
Query: 34 NSIFIADDRDRAIRDYVAPAFQTLDTGILDQ-PIDALTFEMKPLMFQMLNSFGQFPILPN 93
N I +AD +DRA+RDY A + L++ +++ P DA FE KP+M QMLN QF L +
Sbjct: 8 NPIHVADQKDRAMRDYAATILEDLNSSVMNPLPADA-QFEFKPMMLQMLNIICQFGGLEH 67
Query: 94 EDPHKHLNLFMRMCRYCKVNGVSEEALRFKLFPYSLQGDAEAWLDSLQPNSITTWDNLVD 153
EDP HL F+++ C++ G+S++ALR LFP+SL G A AWL++ +ITTW ++VD
Sbjct: 68 EDPRSHLKSFIKVANTCRLPGISDDALRLTLFPFSLSGQATAWLNAFPSGTITTWSDMVD 127
Query: 154 KFIEKYFSLNKNTKYRGDIIAFRQAPSESVDGA 186
KF+ KYF +N R +II+FRQ +E+V+ A
Sbjct: 128 KFLVKYFPPTRNADVREEIISFRQKENEAVNVA 159
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_024027611.1 | 1.1e-37 | 52.38 | uncharacterized protein LOC112093437 [Morus notabilis] | [more] |
ERM93404.1 | 4.0e-37 | 50.00 | hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda] | [more] |
XP_017233063.1 | 6.8e-37 | 52.74 | PREDICTED: uncharacterized protein LOC108207110 [Daucus carota subsp. sativus] | [more] |
XP_030497803.1 | 8.9e-37 | 49.04 | uncharacterized protein LOC115713460 [Cannabis sativa] | [more] |
XP_030508936.1 | 3.4e-36 | 49.03 | uncharacterized protein LOC115723589 [Cannabis sativa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
U5CUI2 | 1.9e-37 | 50.00 | Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMT... | [more] |
A0A6J1E251 | 1.7e-33 | 43.85 | uncharacterized protein LOC111025302 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1H7E4 | 1.9e-32 | 44.74 | uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC1114611... | [more] |
A0A6J1DY39 | 7.1e-32 | 45.75 | uncharacterized protein LOC111025653 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1DSZ5 | 1.6e-31 | 45.75 | uncharacterized protein LOC111024107 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
Match Name | E-value | Identity | Description | |