![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
HG10014399 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGAAGGAAAAGCAATCATCGGAGAGACGGATATGTTGCAGGCCATGCAACAGGACGCTCTGGACCTTGCGGCTAAGGCACTTGACAGTTTTGATGTCACTGAAGCCACTGACATTGCCCGTTTCATTAAAAAGGTAAAATTTATGAAACTAATTACTTAAAAATATATGATTTTAAATCTTGAATTTTTGTGTTTATATTTTCAATAAATATTCATATTGTTATTAAAGAAGGGTAATTTTGGTTGAAAAATGGGCAGGAATTTGACAGGACATATGGGGGAGGATGGCAATGCATAGTGGGCACAGATTTTGGATCATTTGTGACACATTGTTTTGGATGCTTCATTTATTTTTGTGTTGGAAGCCTTGCAATTTTGCTCTTTAGGGGCTCTGCTGCCTCAGAACAAGAACAACCTCAGCCAACTCAGTTTTCTGTTATGGACACAGCTCTCAAACCTTGA ATGTTGGAAGGAAAAGCAATCATCGGAGAGACGGATATGTTGCAGGCCATGCAACAGGACGCTCTGGACCTTGCGGCTAAGGCACTTGACAGTTTTGATGTCACTGAAGCCACTGACATTGCCCGTTTCATTAAAAAGGAATTTGACAGGACATATGGGGGAGGATGGCAATGCATAGTGGGCACAGATTTTGGATCATTTGTGACACATTGTTTTGGATGCTTCATTTATTTTTGTGTTGGAAGCCTTGCAATTTTGCTCTTTAGGGGCTCTGCTGCCTCAGAACAAGAACAACCTCAGCCAACTCAGTTTTCTGTTATGGACACAGCTCTCAAACCTTGA ATGTTGGAAGGAAAAGCAATCATCGGAGAGACGGATATGTTGCAGGCCATGCAACAGGACGCTCTGGACCTTGCGGCTAAGGCACTTGACAGTTTTGATGTCACTGAAGCCACTGACATTGCCCGTTTCATTAAAAAGGAATTTGACAGGACATATGGGGGAGGATGGCAATGCATAGTGGGCACAGATTTTGGATCATTTGTGACACATTGTTTTGGATGCTTCATTTATTTTTGTGTTGGAAGCCTTGCAATTTTGCTCTTTAGGGGCTCTGCTGCCTCAGAACAAGAACAACCTCAGCCAACTCAGTTTTCTGTTATGGACACAGCTCTCAAACCTTGA MLEGKAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEQEQPQPTQFSVMDTALKP Homology
BLAST of HG10014399 vs. NCBI nr
Match: XP_038899068.1 (dynein light chain 2, cytoplasmic [Benincasa hispida]) HSP 1 Score: 208.8 bits (530), Expect = 2.5e-50 Identity = 104/110 (94.55%), Postives = 108/110 (98.18%), Query Frame = 0
BLAST of HG10014399 vs. NCBI nr
Match: XP_004146843.1 (dynein light chain 2, cytoplasmic [Cucumis sativus] >KAE8651306.1 hypothetical protein Csa_000829 [Cucumis sativus]) HSP 1 Score: 201.4 bits (511), Expect = 4.0e-48 Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 0
BLAST of HG10014399 vs. NCBI nr
Match: XP_008454627.1 (PREDICTED: dynein light chain LC6, flagellar outer arm [Cucumis melo] >KAA0036763.1 dynein light chain LC6, flagellar outer arm [Cucumis melo var. makuwa] >TYJ95832.1 dynein light chain LC6, flagellar outer arm [Cucumis melo var. makuwa]) HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46 Identity = 99/117 (84.62%), Postives = 108/117 (92.31%), Query Frame = 0
BLAST of HG10014399 vs. NCBI nr
Match: XP_022941140.1 (dynein light chain 2, cytoplasmic-like [Cucurbita moschata]) HSP 1 Score: 192.6 bits (488), Expect = 1.9e-45 Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0
BLAST of HG10014399 vs. NCBI nr
Match: KAG6607846.1 (hypothetical protein SDJN03_01188, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 191.8 bits (486), Expect = 3.2e-45 Identity = 95/109 (87.16%), Postives = 99/109 (90.83%), Query Frame = 0
BLAST of HG10014399 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 7.7e-18 Identity = 47/89 (52.81%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of HG10014399 vs. ExPASy Swiss-Prot
Match: O96860 (Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Cdlc2 PE=1 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 7.7e-18 Identity = 47/89 (52.81%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of HG10014399 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.3e-17 Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of HG10014399 vs. ExPASy Swiss-Prot
Match: Q24117 (Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.7e-17 Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of HG10014399 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.8e-17 Identity = 45/89 (50.56%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of HG10014399 vs. ExPASy TrEMBL
Match: A0A5A7T1H5 (Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001190 PE=3 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 6.3e-47 Identity = 99/117 (84.62%), Postives = 108/117 (92.31%), Query Frame = 0
BLAST of HG10014399 vs. ExPASy TrEMBL
Match: A0A1S3BZU7 (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103494993 PE=3 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 6.3e-47 Identity = 99/117 (84.62%), Postives = 108/117 (92.31%), Query Frame = 0
BLAST of HG10014399 vs. ExPASy TrEMBL
Match: A0A6J1FSQ1 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111446528 PE=3 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 9.0e-46 Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0
BLAST of HG10014399 vs. ExPASy TrEMBL
Match: A0A6J1J2G7 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111480715 PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.5e-45 Identity = 94/109 (86.24%), Postives = 99/109 (90.83%), Query Frame = 0
BLAST of HG10014399 vs. ExPASy TrEMBL
Match: A0A6J1IHC9 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111476954 PE=3 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.0e-44 Identity = 92/109 (84.40%), Postives = 101/109 (92.66%), Query Frame = 0
BLAST of HG10014399 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 149.1 bits (375), Expect = 2.2e-36 Identity = 71/91 (78.02%), Postives = 80/91 (87.91%), Query Frame = 0
BLAST of HG10014399 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 105.5 bits (262), Expect = 2.8e-23 Identity = 51/91 (56.04%), Postives = 66/91 (72.53%), Query Frame = 0
BLAST of HG10014399 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 ) HSP 1 Score: 99.8 bits (247), Expect = 1.5e-21 Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of HG10014399 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 76.6 bits (187), Expect = 1.4e-14 Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 0
BLAST of HG10014399 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 76.3 bits (186), Expect = 1.8e-14 Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|