HG10014395 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10014395
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr02: 10591143 .. 10591391 (-)
RNA-Seq ExpressionHG10014395
SyntenyHG10014395
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGTAAAGTCACTGTCCCACCTAAAAGAGACTGGAAACAAATGGGACATGAAGAGGCGAACGTGGCTGTTCATGAAGAAGTGAAACGAGTGCAACGGCTTCCTTCTAACAGTTCCTATGCTACTCATCGGTTGCGGGTTTTAAACAAAATTCTGCAGCTTTTATCAATTCAGGTTTGTATCATGGAACTGCAGCAATCATTTGATCAGTTCATGTTAATAATTGATGTAGTAGGAGTAGGGTAA

mRNA sequence

ATGGAAGGTAAAGTCACTGTCCCACCTAAAAGAGACTGGAAACAAATGGGACATGAAGAGGCGAACGTGGCTGTTCATGAAGAAGTGAAACGAGTGCAACGGCTTCCTTCTAACAGTTCCTATGCTACTCATCGGTTGCGGGTTTTAAACAAAATTCTGCAGCTTTTATCAATTCAGGTTTGTATCATGGAACTGCAGCAATCATTTGATCAGTTCATGTTAATAATTGATGTAGTAGGAGTAGGGTAA

Coding sequence (CDS)

ATGGAAGGTAAAGTCACTGTCCCACCTAAAAGAGACTGGAAACAAATGGGACATGAAGAGGCGAACGTGGCTGTTCATGAAGAAGTGAAACGAGTGCAACGGCTTCCTTCTAACAGTTCCTATGCTACTCATCGGTTGCGGGTTTTAAACAAAATTCTGCAGCTTTTATCAATTCAGGTTTGTATCATGGAACTGCAGCAATCATTTGATCAGTTCATGTTAATAATTGATGTAGTAGGAGTAGGGTAA

Protein sequence

MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLRVLNKILQLLSIQVCIMELQQSFDQFMLIIDVVGVG
Homology
[Close]
BLAST of HG10014395 vs. NCBI nr
Match: KAA0036794.1 (uncharacterized protein E6C27_scaffold20G00830 [Cucumis melo var. makuwa] >TYJ95861.1 uncharacterized protein E5676_scaffold110G001550 [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 7.5e-20
Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 0 

Query: 1  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLRVLNKILQLLSIQV 60
          ME KVTVPPKRDWKQMGHEEA VAVHEE+KRVQ+ PSNS+YATHRLRVLNKILQLLSIQ 
Sbjct: 1  MEDKVTVPPKRDWKQMGHEEATVAVHEEMKRVQKFPSNSTYATHRLRVLNKILQLLSIQR 60

Query: 61 CIMELQQ 68
           + + ++
Sbjct: 61 TVSQEEE 67

[Close]
BLAST of HG10014395 vs. NCBI nr
Match: XP_004150100.1 (uncharacterized protein LOC101214758 [Cucumis sativus] >XP_004150101.1 uncharacterized protein LOC101214758 [Cucumis sativus] >KGN59879.1 hypothetical protein Csa_002033 [Cucumis sativus])

HSP 1 Score: 99.4 bits (246), Expect = 1.6e-17
Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 0 

Query: 1  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLRVLNKILQLLSIQ 60
          ME KV VP KRDWKQMGHE A VAVHEE+KRVQ+ PSNS+YATHRLR+LNKILQLLSIQ
Sbjct: 1  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQ 59

[Close]
BLAST of HG10014395 vs. NCBI nr
Match: XP_038898294.1 (uncharacterized protein LOC120085994 [Benincasa hispida] >XP_038898295.1 uncharacterized protein LOC120085994 [Benincasa hispida])

HSP 1 Score: 97.4 bits (241), Expect = 5.9e-17
Identity = 50/67 (74.63%), Postives = 57/67 (85.07%), Query Frame = 0 

Query: 1  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLRVLNKILQLLSIQV 60
          MEGK TV PKR WKQM H+EA  AVHEE+KRVQRLPSNS+YATHRLRVLNKILQLLSIQ 
Sbjct: 1  MEGKFTVSPKRGWKQMEHKEATGAVHEEMKRVQRLPSNSTYATHRLRVLNKILQLLSIQR 60

Query: 61 CIMELQQ 68
           + + ++
Sbjct: 61 TVSQEEE 67

[Close]
BLAST of HG10014395 vs. NCBI nr
Match: XP_022139403.1 (uncharacterized protein LOC111010342 [Momordica charantia] >XP_022139404.1 uncharacterized protein LOC111010342 [Momordica charantia])

HSP 1 Score: 96.7 bits (239), Expect = 1.0e-16
Identity = 46/59 (77.97%), Postives = 52/59 (88.14%), Query Frame = 0 

Query: 1  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLRVLNKILQLLSIQ 60
          ME KV+ PPK +WKQMGHEE  V VH+E+KRVQ+LPSNS+YATHR RVLNKILQLLSIQ
Sbjct: 1  MESKVSAPPKNNWKQMGHEETTVTVHQEMKRVQQLPSNSAYATHRFRVLNKILQLLSIQ 59

[Close]
BLAST of HG10014395 vs. NCBI nr
Match: XP_023535148.1 (uncharacterized protein LOC111796661 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 92.8 bits (229), Expect = 1.5e-15
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0 

Query: 1  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLRVLNKILQLLSIQ 60
          MEGKV+V PK D KQMGH+EA V V EE+KRVQ+LPSNS+YATHR+RVLNKILQLLSIQ
Sbjct: 1  MEGKVSVLPKNDGKQMGHQEAKVVVQEEMKRVQQLPSNSTYATHRMRVLNKILQLLSIQ 59

[Close]
BLAST of HG10014395 vs. ExPASy TrEMBL
Match: A0A5A7SZV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001550 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.6e-20
Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 0 

Query: 1  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLRVLNKILQLLSIQV 60
          ME KVTVPPKRDWKQMGHEEA VAVHEE+KRVQ+ PSNS+YATHRLRVLNKILQLLSIQ 
Sbjct: 1  MEDKVTVPPKRDWKQMGHEEATVAVHEEMKRVQKFPSNSTYATHRLRVLNKILQLLSIQR 60

Query: 61 CIMELQQ 68
           + + ++
Sbjct: 61 TVSQEEE 67

[Close]
BLAST of HG10014395 vs. ExPASy TrEMBL
Match: A0A0A0LFX0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851790 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 7.5e-18
Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 0 

Query: 1  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLRVLNKILQLLSIQ 60
          ME KV VP KRDWKQMGHE A VAVHEE+KRVQ+ PSNS+YATHRLR+LNKILQLLSIQ
Sbjct: 1  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQ 59

[Close]
BLAST of HG10014395 vs. ExPASy TrEMBL
Match: A0A6J1CCW1 (uncharacterized protein LOC111010342 OS=Momordica charantia OX=3673 GN=LOC111010342 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.9e-17
Identity = 46/59 (77.97%), Postives = 52/59 (88.14%), Query Frame = 0 

Query: 1  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLRVLNKILQLLSIQ 60
          ME KV+ PPK +WKQMGHEE  V VH+E+KRVQ+LPSNS+YATHR RVLNKILQLLSIQ
Sbjct: 1  MESKVSAPPKNNWKQMGHEETTVTVHQEMKRVQQLPSNSAYATHRFRVLNKILQLLSIQ 59

[Close]
BLAST of HG10014395 vs. ExPASy TrEMBL
Match: A0A6J1IHD5 (uncharacterized protein LOC111476958 OS=Cucurbita maxima OX=3661 GN=LOC111476958 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 9.2e-16
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0 

Query: 1  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLRVLNKILQLLSIQ 60
          MEGKV+V PK + KQMGH+EA V V EE+KRVQ+LPSNS+YATHRLRVLNKILQLLSIQ
Sbjct: 1  MEGKVSVSPKNNGKQMGHQEAKVVVQEEMKRVQQLPSNSTYATHRLRVLNKILQLLSIQ 59

[Close]
BLAST of HG10014395 vs. ExPASy TrEMBL
Match: A0A6J1F6C2 (uncharacterized protein LOC111442587 OS=Cucurbita moschata OX=3662 GN=LOC111442587 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 9.2e-16
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0 

Query: 1  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLRVLNKILQLLSIQ 60
          MEGKV+V PK + KQMGH+EA V V EE+KRVQ+LPSNS+YATHRLRVLNKILQLLSIQ
Sbjct: 1  MEGKVSVSPKNNGKQMGHQEAKVVVQEEMKRVQQLPSNSTYATHRLRVLNKILQLLSIQ 59

[Close]
BLAST of HG10014395 vs. TAIR 10
Match: AT3G13677.1 (unknown protein; Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 1.8e-08
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 0 

Query: 13 WKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLRVLNKILQLLSIQ 60
          W +M  +E +  + EE+KRV +LPSNS YA HRL+VLNKI  LLS+Q
Sbjct: 12 WNEMDCDEKSSVIQEEIKRVCKLPSNSVYAVHRLKVLNKINDLLSVQ 58

[Close]
BLAST of HG10014395 vs. TAIR 10
Match: AT3G13677.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 1.8e-08
Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 0 

Query: 13 WKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLRVLNKILQLLSIQVCI---MELQQSF 72
          W +M  +E +  + EE+KRV +LPSNS YA HRL+VLNKI  LLS+Q  +    EL+  F
Sbjct: 12 WNEMDCDEKSSVIQEEIKRVCKLPSNSVYAVHRLKVLNKINDLLSVQRTLSQEKELELLF 71

Query: 73 DQFML 75
           Q  L
Sbjct: 72 TQLSL 76

The following BLAST results are available for this feature:
BLAST of HG10014395 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0036794.17.5e-2079.10uncharacterized protein E6C27_scaffold20G00830 [Cucumis melo var. makuwa] >TYJ95... [more]
XP_004150100.11.6e-1783.05uncharacterized protein LOC101214758 [Cucumis sativus] >XP_004150101.1 uncharact... [more]
XP_038898294.15.9e-1774.63uncharacterized protein LOC120085994 [Benincasa hispida] >XP_038898295.1 unchara... [more]
XP_022139403.11.0e-1677.97uncharacterized protein LOC111010342 [Momordica charantia] >XP_022139404.1 uncha... [more]
XP_023535148.11.5e-1579.66uncharacterized protein LOC111796661 [Cucurbita pepo subsp. pepo][more]
BLAST of HG10014395 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of HG10014395 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SZV03.6e-2079.10Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LFX07.5e-1883.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851790 PE=4 SV=1[more]
A0A6J1CCW14.9e-1777.97uncharacterized protein LOC111010342 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A6J1IHD59.2e-1679.66uncharacterized protein LOC111476958 OS=Cucurbita maxima OX=3661 GN=LOC111476958... [more]
A0A6J1F6C29.2e-1679.66uncharacterized protein LOC111442587 OS=Cucurbita moschata OX=3662 GN=LOC1114425... [more]
BLAST of HG10014395 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13677.11.8e-0857.45unknown protein; Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bac... [more]
AT3G13677.21.8e-0849.23unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10014395.1HG10014395.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane