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HG10014382 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATACCAATGCTTCTTGGAACTCTGGTCTAGGTTGTGGAGGGCTGGGATGGCAGGTTCGTGACTCACTTGGATATTCGATCTATGCTGATTTCAAGCATGTCTCACGAGAGTGGTCAATTTGTGTGTTGGAAGCTCAAGCAATCGTTGAACGCCTTAGAAGTCTTATGTTCCTCAATCGTGATCTTCCTCCCATCTTGGTTGAATCTGATGCAAAAAGAGTTGTGGATCAAATCAACCAATCTATGGTTGATCTCACTAAAGTGAGAAACTCCATCGATGAAATCGAAGAGCTAGTGATCTTTTTGAGTCCCTCTTTGCTGTCTTTTCCGTTTTGCCACAAGGATGAGAATTGCAAAGCTCACTGTATTGCTCGTGTTGTAGCTAGTTTTGAAAACTTTTGTGAGGAGAGTTTTTCTTCCAAATCGAAAGATTGTGGAATCTCTTTTGAGATTCTAATTTTGGTTGTTGAATGCTGTAAATGGGGAGTTATTGTTACTGGTTTCTACCAACATTTAATTTTTAATGAAGTTCTCTTTCAGTAA ATGAATACCAATGCTTCTTGGAACTCTGGTCTAGGTTGTGGAGGGCTGGGATGGCAGGTTCGTGACTCACTTGGATATTCGATCTATGCTGATTTCAAGCATGTCTCACGAGAGTGGTCAATTTGTGTGTTGGAAGCTCAAGCAATCGTTGAACGCCTTAGAAGTCTTATGTTCCTCAATCGTGATCTTCCTCCCATCTTGGTTGAATCTGATGCAAAAAGAGTTGTGGATCAAATCAACCAATCTATGGTTGATCTCACTAAAGTGAGAAACTCCATCGATGAAATCGAAGAGCTAGTGATCTTTTTGAGTCCCTCTTTGCTGTCTTTTCCGTTTTGCCACAAGGATGAGAATTGCAAAGCTCACTGTATTGCTCGTGTTGTAGCTAGTTTTGAAAACTTTTGTGAGGAGAGTTTTTCTTCCAAATCGAAAGATTGTGGAATCTCTTTTGAGATTCTAATTTTGGTTGTTGAATGCTGTAAATGGGGAGTTATTGTTACTGGTTTCTACCAACATTTAATTTTTAATGAAGTTCTCTTTCAGTAA ATGAATACCAATGCTTCTTGGAACTCTGGTCTAGGTTGTGGAGGGCTGGGATGGCAGGTTCGTGACTCACTTGGATATTCGATCTATGCTGATTTCAAGCATGTCTCACGAGAGTGGTCAATTTGTGTGTTGGAAGCTCAAGCAATCGTTGAACGCCTTAGAAGTCTTATGTTCCTCAATCGTGATCTTCCTCCCATCTTGGTTGAATCTGATGCAAAAAGAGTTGTGGATCAAATCAACCAATCTATGGTTGATCTCACTAAAGTGAGAAACTCCATCGATGAAATCGAAGAGCTAGTGATCTTTTTGAGTCCCTCTTTGCTGTCTTTTCCGTTTTGCCACAAGGATGAGAATTGCAAAGCTCACTGTATTGCTCGTGTTGTAGCTAGTTTTGAAAACTTTTGTGAGGAGAGTTTTTCTTCCAAATCGAAAGATTGTGGAATCTCTTTTGAGATTCTAATTTTGGTTGTTGAATGCTGTAAATGGGGAGTTATTGTTACTGGTTTCTACCAACATTTAATTTTTAATGAAGTTCTCTTTCAGTAA MNTNASWNSGLGCGGLGWQVRDSLGYSIYADFKHVSREWSICVLEAQAIVERLRSLMFLNRDLPPILVESDAKRVVDQINQSMVDLTKVRNSIDEIEELVIFLSPSLLSFPFCHKDENCKAHCIARVVASFENFCEESFSSKSKDCGISFEILILVVECCKWGVIVTGFYQHLIFNEVLFQ Homology
BLAST of HG10014382 vs. NCBI nr
Match: KAG6599977.1 (hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 60.1 bits (144), Expect = 2.3e-05 Identity = 33/104 (31.73%), Postives = 60/104 (57.69%), Query Frame = 0
BLAST of HG10014382 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia]) HSP 1 Score: 58.9 bits (141), Expect = 5.2e-05 Identity = 42/126 (33.33%), Postives = 69/126 (54.76%), Query Frame = 0
BLAST of HG10014382 vs. NCBI nr
Match: EEC72931.1 (hypothetical protein OsI_06781 [Oryza sativa Indica Group]) HSP 1 Score: 56.2 bits (134), Expect = 3.3e-04 Identity = 40/125 (32.00%), Postives = 67/125 (53.60%), Query Frame = 0
BLAST of HG10014382 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.5e-05 Identity = 42/126 (33.33%), Postives = 69/126 (54.76%), Query Frame = 0
BLAST of HG10014382 vs. ExPASy TrEMBL
Match: B8AFN2 (RNase H domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_06781 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.6e-04 Identity = 40/125 (32.00%), Postives = 67/125 (53.60%), Query Frame = 0
BLAST of HG10014382 vs. ExPASy TrEMBL
Match: A0A2Z6PIX2 (Reverse transcriptase domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_88120 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 8.0e-04 Identity = 39/129 (30.23%), Postives = 61/129 (47.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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