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HG10014379 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGACAATTTTTCAGTCCCAACCCCAGCCTCGTCGGAGCACCTCCGTCGCCGGACGGGAAGCCAGCCGGACCCGTACCGTTAGATCCACTTGCAGGAGCTTCAGTTTTGGTGGGATGGTTAGAGGTGGCCGGAATCTGATGGCGGTGCCCGGAGATAAGTGCCGCCGGAATCAGGGAAGCAGAGAGGTTTTGAGAAGGGCTTTGATGCCGCCTAGCCGGAGACCCTCTCTCCGGTGGATGAATTTCCGGCCAACTCCCAGTCGCCTTTCGAATATGTCAATGGCGGAGAGTTAA ATGCCGACAATTTTTCAGTCCCAACCCCAGCCTCGTCGGAGCACCTCCGTCGCCGGACGGGAAGCCAGCCGGACCCGTACCGTTAGATCCACTTGCAGGAGCTTCAGTTTTGGTGGGATGGTTAGAGGTGGCCGGAATCTGATGGCGGTGCCCGGAGATAAGTGCCGCCGGAATCAGGGAAGCAGAGAGGTTTTGAGAAGGGCTTTGATGCCGCCTAGCCGGAGACCCTCTCTCCGGTGGATGAATTTCCGGCCAACTCCCAGTCGCCTTTCGAATATGTCAATGGCGGAGAGTTAA ATGCCGACAATTTTTCAGTCCCAACCCCAGCCTCGTCGGAGCACCTCCGTCGCCGGACGGGAAGCCAGCCGGACCCGTACCGTTAGATCCACTTGCAGGAGCTTCAGTTTTGGTGGGATGGTTAGAGGTGGCCGGAATCTGATGGCGGTGCCCGGAGATAAGTGCCGCCGGAATCAGGGAAGCAGAGAGGTTTTGAGAAGGGCTTTGATGCCGCCTAGCCGGAGACCCTCTCTCCGGTGGATGAATTTCCGGCCAACTCCCAGTCGCCTTTCGAATATGTCAATGGCGGAGAGTTAA MPTIFQSQPQPRRSTSVAGREASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMAES Homology
BLAST of HG10014379 vs. NCBI nr
Match: KAA0036871.1 (uncharacterized protein E6C27_scaffold20G001820 [Cucumis melo var. makuwa] >TYJ95931.1 uncharacterized protein E5676_scaffold110G002460 [Cucumis melo var. makuwa]) HSP 1 Score: 176.8 bits (447), Expect = 9.2e-41 Identity = 89/98 (90.82%), Postives = 92/98 (93.88%), Query Frame = 0
BLAST of HG10014379 vs. NCBI nr
Match: XP_011652880.1 (uncharacterized protein LOC105435142 [Cucumis sativus]) HSP 1 Score: 173.7 bits (439), Expect = 7.8e-40 Identity = 87/98 (88.78%), Postives = 91/98 (92.86%), Query Frame = 0
BLAST of HG10014379 vs. NCBI nr
Match: KGN60027.2 (hypothetical protein Csa_001878 [Cucumis sativus]) HSP 1 Score: 172.6 bits (436), Expect = 1.7e-39 Identity = 86/98 (87.76%), Postives = 91/98 (92.86%), Query Frame = 0
BLAST of HG10014379 vs. NCBI nr
Match: KAG7024857.1 (hypothetical protein SDJN02_13676, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 143.7 bits (361), Expect = 8.6e-31 Identity = 76/101 (75.25%), Postives = 85/101 (84.16%), Query Frame = 0
BLAST of HG10014379 vs. NCBI nr
Match: KAG6607862.1 (hypothetical protein SDJN03_01204, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037392.1 hypothetical protein SDJN02_01017, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 122.9 bits (307), Expect = 1.6e-24 Identity = 68/98 (69.39%), Postives = 77/98 (78.57%), Query Frame = 0
BLAST of HG10014379 vs. ExPASy TrEMBL
Match: A0A5A7T5L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002460 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 4.4e-41 Identity = 89/98 (90.82%), Postives = 92/98 (93.88%), Query Frame = 0
BLAST of HG10014379 vs. ExPASy TrEMBL
Match: A0A0A0LD23 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G852440 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 3.8e-40 Identity = 87/98 (88.78%), Postives = 91/98 (92.86%), Query Frame = 0
BLAST of HG10014379 vs. ExPASy TrEMBL
Match: A0A4U5P590 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000228140 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 6.7e-13 Identity = 50/95 (52.63%), Postives = 60/95 (63.16%), Query Frame = 0
BLAST of HG10014379 vs. ExPASy TrEMBL
Match: B9N1L2 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G404500 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.5e-12 Identity = 52/108 (48.15%), Postives = 62/108 (57.41%), Query Frame = 0
BLAST of HG10014379 vs. ExPASy TrEMBL
Match: A0A6N2MHB8 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS358945 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.5e-12 Identity = 52/108 (48.15%), Postives = 63/108 (58.33%), Query Frame = 0
BLAST of HG10014379 vs. TAIR 10
Match: AT3G15518.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 62.8 bits (151), Expect = 1.8e-10 Identity = 36/70 (51.43%), Postives = 43/70 (61.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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