![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
HG10014346 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGAGCACAAATCTCCTCCAATTCCCTCTCCTTCAACACCACTTCCGGCCACCGTCCGCTCTCCTTTTTCCTGCCGTCAAATCCCATCTCTCCGTCGTCTCAATCACTTTTCCCAGCTCCCAGTTCCTCCATAACCCTTCCCATGCTCCGGGACCGGCAGGGTTCGCTCTCATGGCAAAGTCTCCAAAAAACGATACCTCCGAGCAGAAATGGAGCCATGAAGGCTCGGTCGTTGAGTCTCTTCCTAATGGGATGTTCAGGGTTCGATTGGATAATGAAGACCTCATTCTAGGCTACATATCCGGTAAGATTCGGAAGAATTTTGTGCGTATTTTGCCTGGTGATAGGGTCAGGGTTGAAGTTAGCCGTTACGATTCTACCAAAGGCCGTATTGTTTATAGACTTCGAAGTACTAAAGATTCATCTTCATGA ATGTCGAGCACAAATCTCCTCCAATTCCCTCTCCTTCAACACCACTTCCGGCCACCGTCCGCTCTCCTTTTTCCTGCCGTCAAATCCCATCTCTCCGTCGTCTCAATCACTTTTCCCAGCTCCCAGTTCCTCCATAACCCTTCCCATGCTCCGGGACCGGCAGGGTTCGCTCTCATGGCAAAGTCTCCAAAAAACGATACCTCCGAGCAGAAATGGAGCCATGAAGGCTCGGTCGTTGAGTCTCTTCCTAATGGGATGTTCAGGGTTCGATTGGATAATGAAGACCTCATTCTAGGCTACATATCCGGTAAGATTCGGAAGAATTTTGTGCGTATTTTGCCTGGTGATAGGGTCAGGGTTGAAGTTAGCCGTTACGATTCTACCAAAGGCCGTATTGTTTATAGACTTCGAAGTACTAAAGATTCATCTTCATGA ATGTCGAGCACAAATCTCCTCCAATTCCCTCTCCTTCAACACCACTTCCGGCCACCGTCCGCTCTCCTTTTTCCTGCCGTCAAATCCCATCTCTCCGTCGTCTCAATCACTTTTCCCAGCTCCCAGTTCCTCCATAACCCTTCCCATGCTCCGGGACCGGCAGGGTTCGCTCTCATGGCAAAGTCTCCAAAAAACGATACCTCCGAGCAGAAATGGAGCCATGAAGGCTCGGTCGTTGAGTCTCTTCCTAATGGGATGTTCAGGGTTCGATTGGATAATGAAGACCTCATTCTAGGCTACATATCCGGTAAGATTCGGAAGAATTTTGTGCGTATTTTGCCTGGTGATAGGGTCAGGGTTGAAGTTAGCCGTTACGATTCTACCAAAGGCCGTATTGTTTATAGACTTCGAAGTACTAAAGATTCATCTTCATGA MSSTNLLQFPLLQHHFRPPSALLFPAVKSHLSVVSITFPSSQFLHNPSHAPGPAGFALMAKSPKNDTSEQKWSHEGSVVESLPNGMFRVRLDNEDLILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSTKDSSS Homology
BLAST of HG10014346 vs. NCBI nr
Match: XP_038899010.1 (translation initiation factor IF-1, chloroplastic [Benincasa hispida]) HSP 1 Score: 257.3 bits (656), Expect = 7.9e-65 Identity = 134/145 (92.41%), Postives = 136/145 (93.79%), Query Frame = 0
BLAST of HG10014346 vs. NCBI nr
Match: KAA0064332.1 (translation initiation factor IF-1 [Cucumis melo var. makuwa] >TYK20254.1 translation initiation factor IF-1 [Cucumis melo var. makuwa]) HSP 1 Score: 253.8 bits (647), Expect = 8.7e-64 Identity = 133/145 (91.72%), Postives = 136/145 (93.79%), Query Frame = 0
BLAST of HG10014346 vs. NCBI nr
Match: XP_011654076.1 (uncharacterized protein LOC101206284 [Cucumis sativus] >KGN55131.1 hypothetical protein Csa_012104 [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 5.6e-63 Identity = 130/144 (90.28%), Postives = 135/144 (93.75%), Query Frame = 0
BLAST of HG10014346 vs. NCBI nr
Match: XP_022940969.1 (translation initiation factor IF-1, chloroplastic-like [Cucurbita moschata] >XP_023525132.1 translation initiation factor IF-1, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG7037405.1 Translation initiation factor IF-1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59 Identity = 122/144 (84.72%), Postives = 130/144 (90.28%), Query Frame = 0
BLAST of HG10014346 vs. NCBI nr
Match: KAG6607876.1 (Translation initiation factor IF-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 239.2 bits (609), Expect = 2.2e-59 Identity = 123/144 (85.42%), Postives = 130/144 (90.28%), Query Frame = 0
BLAST of HG10014346 vs. ExPASy Swiss-Prot
Match: Q94KR7 (Translation initiation factor IF-1, chloroplastic OS=Glycine max OX=3847 GN=infA PE=2 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.6e-31 Identity = 67/100 (67.00%), Postives = 79/100 (79.00%), Query Frame = 0
BLAST of HG10014346 vs. ExPASy Swiss-Prot
Match: A0A370 (Translation initiation factor IF-1, chloroplastic OS=Coffea arabica OX=13443 GN=infA PE=3 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.1e-29 Identity = 60/74 (81.08%), Postives = 71/74 (95.95%), Query Frame = 0
BLAST of HG10014346 vs. ExPASy Swiss-Prot
Match: Q09G11 (Translation initiation factor IF-1, chloroplastic OS=Platanus occidentalis OX=4403 GN=infA PE=3 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.1e-29 Identity = 61/75 (81.33%), Postives = 71/75 (94.67%), Query Frame = 0
BLAST of HG10014346 vs. ExPASy Swiss-Prot
Match: Q94KR9 (Translation initiation factor IF-1, chloroplastic OS=Solanum lycopersicum OX=4081 GN=infA PE=2 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.9e-29 Identity = 56/75 (74.67%), Postives = 70/75 (93.33%), Query Frame = 0
BLAST of HG10014346 vs. ExPASy Swiss-Prot
Match: Q7ICQ5 (Translation initiation factor IF-1, chloroplastic OS=Fouquieria splendens OX=13533 GN=infA PE=3 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 2.5e-29 Identity = 60/74 (81.08%), Postives = 70/74 (94.59%), Query Frame = 0
BLAST of HG10014346 vs. ExPASy TrEMBL
Match: A0A5A7V7J3 (Translation initiation factor IF-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003940 PE=3 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 4.2e-64 Identity = 133/145 (91.72%), Postives = 136/145 (93.79%), Query Frame = 0
BLAST of HG10014346 vs. ExPASy TrEMBL
Match: A0A0A0L4Q7 (S1-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G637710 PE=3 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.7e-63 Identity = 130/144 (90.28%), Postives = 135/144 (93.75%), Query Frame = 0
BLAST of HG10014346 vs. ExPASy TrEMBL
Match: A0A6J1FLU6 (translation initiation factor IF-1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111446393 PE=3 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 8.2e-60 Identity = 122/144 (84.72%), Postives = 130/144 (90.28%), Query Frame = 0
BLAST of HG10014346 vs. ExPASy TrEMBL
Match: A0A6J1IW62 (translation initiation factor IF-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111480474 PE=3 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 2.4e-59 Identity = 123/144 (85.42%), Postives = 129/144 (89.58%), Query Frame = 0
BLAST of HG10014346 vs. ExPASy TrEMBL
Match: A0A6J1IP00 (uncharacterized protein LOC111476947 OS=Cucurbita maxima OX=3661 GN=LOC111476947 PE=3 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 1.0e-57 Identity = 117/139 (84.17%), Postives = 126/139 (90.65%), Query Frame = 0
BLAST of HG10014346 vs. TAIR 10
Match: AT4G11175.1 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 104.0 bits (258), Expect = 1.0e-22 Identity = 64/130 (49.23%), Postives = 80/130 (61.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|