HG10014321 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10014321
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionHeat shock protein DnaJ, cysteine-rich domain containing protein
LocationChr02: 9588703 .. 9592149 (-)
RNA-Seq ExpressionHG10014321
SyntenyHG10014321
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAGTTCTGTGTATTGCAAGCCTTTGATTATGGCGAAATCGATTGACGGAAGAGAATTTGCTTCTACAAAAATAATGTTATTCGGTTCCAGATTTGCTACGAATCGTGTTTCGTTCATCGATTCGAGGCTATTGAAGTCTAGGATTTGTGGCGTGCGAGCTTCCATGGTGGATTCTTATGGAAGCTCCGATTTCGTCAAGAGGATGGAGCAAGCATGGGAGATCTCTCAGGTACTCGCGATCTTTTACACTCCTCGTAACTTCCGTTCATTTCATGGCTGTTTCATTTGTCTATCTCTCTGTCTGTCCTTTGAGCGACGGTAGAACCAGTAGATGATTTCTTCCTCTTTCTTAGGCCATGTCATTCCTTCCAACGAAGATTGAAATATTCATTTCCTCTAATACTCTGTGAGCATTTGTAGCGACATTTATGAATCTAACCGAGGAAATTAGACCTGCTAATTCAACGAGCCTGTTTGCTTACATTCCGTTCCTACGTTTTCGTAGTCAGGAGGAGGAAGAGGAACCGCAAAATGCCTAATCGTGATCCGCTGAACCTAACGTAGTCTGCAAAGATTAGAAACCAGTCCTCATAACATAACGCGCGCAGGTTCAAGTGCTAACGTTCTTTTTCTGCCGTAACATGATCAGGCGTAGGAACCGATGAATTTCCTATGATTCTTCTGTCATGATATTGCAGTTTAAAATTAACATCTGTCTTTACAAACTTAGTAGGAGAATATTCAAATTCTTTGGAACTATAGCTTATATTTGTTTCCTGTTCATCATATTTAATCTTATTGCAACATGATTTACAATATTTAGAAGAAAAAACTATTCCGTCATTCCATGTGTTCCTGTTCGAACTTAAGATGAATTGAATGCGACATCATGAAAAGTCTAACAACCCTAATTATACGTTGACAGCAACCAACGCCTATTTGCTGCTCTTCTTGCAACTCAAATGGACATGTTGAGTGTAAATGGTGTACAGGAACTGGCTTCTTTATTCTCGGAGATAATATGCTTTGTCAAGTTCCTTCCAGAAACACTAGCTGTGTCATTTGTGCTGGCAAGGTAATCACGAAACTGGTTTGATCTCTACCTTTTCTTTTCTTGGATCATTGGATGTGTTTTGAACCCCCTTCACGGTGTGTTTGCTGTTGTTATCATGCTATGAAGTGCTTTTATAGAAATATATCAGATAAATATGTTAATAGTAGAACAATTTGTGGTGTTTGATAAATATGTTAATAGTAGAACAATTTGTGGTGTTTTTATCTAATTAAAAGTATTTTTGTAATAATTAATACTTAAAACAAATATTTTTAGAATGGACAAACCAGTAAAAAAAAAAAAGGATTAAAACTAAGTTACAGTATTTTAGTGCGTATAGAAATTGGTGAGATAAATATGTAAAATCATGAGCTAGCGTGAGAAAGTGTGGGTAGAAAGTATTTAAGAATGAGCGTTTAAGTCCAAATTACTACTTTTATTTTATTTATTTTTTATTTTTTAAGTATTTTTAACCTGTACTCCTACATATTACATAACATTTGAGGCAGGTCAAAGTGTTTTTAACCACTAGAAATAACTTTTTAAATTATTAAGAGCTCTCTCCCTCAAGTATTATGACTGAAAGCGCTTTTACATACTTTGAAGGCTCTTAAATTTAATCTGGATAATTTAGGTTCGATAAACCTTTGATTTTTAAAAATTAAGTGATAAGTATTACTTTCATCTAGTTTCTTTGTTTTGTTGTCTACATTTTGAGGATTGTACTCAAAATTTAAACTATGTTTTGAAAACTAAATCAAGTAGTGTTTAAAAATTTGTCGTTGTTTTTCATTTTTTATTATATACATATATAATTTGGCTAAGAATTCAAAAGTTCACATAGGAAAGATGTAAATTTGTATTAAGAAATTGTGAGAAAATAAGTACCATTTTCAAACCAAAAATTAAAAAAATCAAACCGTTATCAAATGCGGACTTCGTAACGCTTTTTTACCTTGTTAGAACACTATTTTAAACCCTAGACCGCCAAGGTCTGTCTTGAACTAGTTGAGTTATACGTTGCCCATATTGGCTATAAGAAATCAGTGTGCTTCTATTTTTGGCTCGAATGTCTTGGCCTTCGTCCTTCAGTGCATACTTTCCTTTTTGTACCTCTATTTATTTTCTTTTGCCAAGTTTTTTACCTTACTTTTTGAACGCTACTAGCACTCATCACTCAACTTCACAGTTGACATTTTCTAGCATTCTTCCCCCATTCTCTCTGTACACTTTCTATTACTAACTTCCTTACACCCACGCCTATTTTATTATTATTATTATTATTTACATCTTACCTACTTTAAAAAGTGTTTTAAATAACAATTTTGTATGGTTACGCTACATTAAAAAACGATCATGTAATCCATGAGTATGTTTTTTTTTCCTTCACTGTATAAAGGATTTTCGGTTGATCACTTTGAGGTCTTTTTTTTTTAAACGGACACTTTGAAGTTAATTTTGAATAACTTTTCATGTATTTTGTTCAAAAATAGATTAAGAATTAATCCACTTTTAAAGTAAGTTTTATTTATTAATTTTTTTAAAGAAACGCTTTAATCATCTAAAATCCTCCCATGTGCTATACTAAATACAATTTAAATTCAAATTCATGTAATACTTTCTCACTACATTGTTTTTTCTTCTAGTTTTAACATTTAGGAAGTGGTCAATTTTAGAGATATTTACTGAATAAGTATTATTTAGGAGAATTTTTAAAAAGAGAAAAAAATAAGGAAAATTATTTACACAAAATATTAATATTTGTAGATAGTTGTGATAAATGATCATGGTCTATCAATGATAGACTGTGATAGAAGTCTATCAATGTCTATTAGTGATTTGTTTTTACTATTTTTTATAAATAGTTTAACATTTTTTTTATTTATGAAAATTTCTTTATTATTTATTAAGAGATATTTACTGAATAAGTATTAGTTACTTTCAATTGCAGTACCTTAAAAATACTCGGTTTCACAAAATCAAGTATGGTTCATTTCACACACGTGTTTGAATTTCCCTAGTCCAATTGTACCCTACAAAAATAAAAAGAAAAGAAAAGTACTCAGTTTCAATTTTGTTTGGCATCATTTTTCAGGGCTCTATGCGTTGCTCCGACTGTAAGGGAACAGGCTACCGGGCCAAGTGGTTGGGAGAACCCCCCATCTCTAAATAGTTTGATTGGGTGCTGCCTGGTCTGTAAGGTCAAGCTATTATTTTTCATTCATTTTTTTTTTTAAAAAAAAAAGAAGAATAGGTCGTAGCGCAGTTTTAGAGATAATTTCATAGTGAAAATGAAAAAGGTTGCTTCGTCTCATGATTTCTATTGTATTTTAGCAGTCAGCGTGCGACTCAATTGCACAGGCTTGTTTCTGTTCTAATGTTTTTTGA

mRNA sequence

ATGACGAGTTCTGTGTATTGCAAGCCTTTGATTATGGCGAAATCGATTGACGGAAGAGAATTTGCTTCTACAAAAATAATGTTATTCGGTTCCAGATTTGCTACGAATCGTGTTTCGTTCATCGATTCGAGGCTATTGAAGTCTAGGATTTGTGGCGTGCGAGCTTCCATGGTGGATTCTTATGGAAGCTCCGATTTCGTCAAGAGGATGGAGCAAGCATGGGAGATCTCTCAGGAACTGGCTTCTTTATTCTCGGAGATAATATGCTTTGTCAAGTTCCTTCCAGAAACACTAGCTGTGTCATTTGTGCTGGCAAGGGCTCTATGCGTTGCTCCGACTGTAAGGGAACAGGCTACCGGGCCAAGTGGTTGGGAGAACCCCCCATCTCTAAATAGTTTGATTGGGTGCTGCCTGTCAGCGTGCGACTCAATTGCACAGGCTTGTTTCTGTTCTAATGTTTTTTGA

Coding sequence (CDS)

ATGACGAGTTCTGTGTATTGCAAGCCTTTGATTATGGCGAAATCGATTGACGGAAGAGAATTTGCTTCTACAAAAATAATGTTATTCGGTTCCAGATTTGCTACGAATCGTGTTTCGTTCATCGATTCGAGGCTATTGAAGTCTAGGATTTGTGGCGTGCGAGCTTCCATGGTGGATTCTTATGGAAGCTCCGATTTCGTCAAGAGGATGGAGCAAGCATGGGAGATCTCTCAGGAACTGGCTTCTTTATTCTCGGAGATAATATGCTTTGTCAAGTTCCTTCCAGAAACACTAGCTGTGTCATTTGTGCTGGCAAGGGCTCTATGCGTTGCTCCGACTGTAAGGGAACAGGCTACCGGGCCAAGTGGTTGGGAGAACCCCCCATCTCTAAATAGTTTGATTGGGTGCTGCCTGTCAGCGTGCGACTCAATTGCACAGGCTTGTTTCTGTTCTAATGTTTTTTGA

Protein sequence

MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQELASLFSEIICFVKFLPETLAVSFVLARALCVAPTVREQATGPSGWENPPSLNSLIGCCLSACDSIAQACFCSNVF
Homology
[Close]
BLAST of HG10014321 vs. NCBI nr
Match: KAE8649933.1 (hypothetical protein Csa_011967 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-33
Identity = 97/183 (53.01%), Postives = 104/183 (56.83%), Query Frame = 0 

Query: 1   MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDS 60
           M+SSV CK +IMAKSID + FA T+ +   SRFA NRVS IDSRL KSRICGVRASMVDS
Sbjct: 1   MSSSVCCKSVIMAKSIDSKGFACTRTVSICSRFAANRVSLIDSRLFKSRICGVRASMVDS 60

Query: 61  YGSSDFVKRMEQAWEISQ------------------------------------------ 120
           YGSSDFVKRMEQAWEISQ                                          
Sbjct: 61  YGSSDFVKRMEQAWEISQANVPISFLISDSSVVLWQFRIYIRLHQHDSRIFKFLELNQGL 120

Query: 121 ------------------ELASLFSEIICFVKFLPETLAVSFVLARALCVAPTVREQATG 124
                             ELASLF EIICFVKFLPETLAVSFV AR L VA TV+ Q TG
Sbjct: 121 FAALPATQMDMLSANGVEELASLFLEIICFVKFLPETLAVSFVPARDLGVALTVKAQVTG 180

[Close]
BLAST of HG10014321 vs. NCBI nr
Match: XP_022977132.1 (uncharacterized protein LOC111477293 [Cucurbita maxima])

HSP 1 Score: 125.6 bits (314), Expect = 3.8e-25
Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 0 

Query: 1  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDS 60
          MTSSV  +P+I+AKSIDGR F+ST+I+L GS FA NRVSF DSRLL SRICG RAS+VDS
Sbjct: 1  MTSSVCFRPVILAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASLVDS 60

Query: 61 YGSSDFVKRMEQAWEISQE 80
          YGSSDFVKRMEQAWEISQ+
Sbjct: 61 YGSSDFVKRMEQAWEISQQ 79

[Close]
BLAST of HG10014321 vs. NCBI nr
Match: KAG7024403.1 (hypothetical protein SDJN02_13217 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124.8 bits (312), Expect = 6.5e-25
Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 0 

Query: 1  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDS 60
          M+SSV  +P+I+AKSIDGR F+ST+I+L GS FA NRVSF DSRLL SRICG RASMVDS
Sbjct: 1  MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60

Query: 61 YGSSDFVKRMEQAWEISQE 80
          YGSSDFVKRMEQAWEISQ+
Sbjct: 61 YGSSDFVKRMEQAWEISQQ 79

[Close]
BLAST of HG10014321 vs. NCBI nr
Match: XP_022935899.1 (uncharacterized protein LOC111442664 [Cucurbita moschata])

HSP 1 Score: 124.8 bits (312), Expect = 6.5e-25
Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 0 

Query: 1  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDS 60
          M+SSV  +P+I+AKSIDGR F+ST+I+L GS FA NRVSF DSRLL SRICG RASMVDS
Sbjct: 1  MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60

Query: 61 YGSSDFVKRMEQAWEISQE 80
          YGSSDFVKRMEQAWEISQ+
Sbjct: 61 YGSSDFVKRMEQAWEISQQ 79

[Close]
BLAST of HG10014321 vs. NCBI nr
Match: KAG6591516.1 (hypothetical protein SDJN03_13862, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 124.8 bits (312), Expect = 6.5e-25
Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 0 

Query: 1  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDS 60
          M+SSV  +P+I+AKSIDGR F+ST+I+L GS FA NRVSF DSRLL SRICG RASMVDS
Sbjct: 1  MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60

Query: 61 YGSSDFVKRMEQAWEISQE 80
          YGSSDFVKRMEQAWEISQ+
Sbjct: 61 YGSSDFVKRMEQAWEISQQ 79

[Close]
BLAST of HG10014321 vs. ExPASy TrEMBL
Match: A0A6J1IHL0 (uncharacterized protein LOC111477293 OS=Cucurbita maxima OX=3661 GN=LOC111477293 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.8e-25
Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 0 

Query: 1  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDS 60
          MTSSV  +P+I+AKSIDGR F+ST+I+L GS FA NRVSF DSRLL SRICG RAS+VDS
Sbjct: 1  MTSSVCFRPVILAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASLVDS 60

Query: 61 YGSSDFVKRMEQAWEISQE 80
          YGSSDFVKRMEQAWEISQ+
Sbjct: 61 YGSSDFVKRMEQAWEISQQ 79

[Close]
BLAST of HG10014321 vs. ExPASy TrEMBL
Match: A0A6J1F6R2 (uncharacterized protein LOC111442664 OS=Cucurbita moschata OX=3662 GN=LOC111442664 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.2e-25
Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 0 

Query: 1  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDS 60
          M+SSV  +P+I+AKSIDGR F+ST+I+L GS FA NRVSF DSRLL SRICG RASMVDS
Sbjct: 1  MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60

Query: 61 YGSSDFVKRMEQAWEISQE 80
          YGSSDFVKRMEQAWEISQ+
Sbjct: 61 YGSSDFVKRMEQAWEISQQ 79

[Close]
BLAST of HG10014321 vs. ExPASy TrEMBL
Match: A0A0A0L478 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651790 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 7.8e-24
Identity = 61/79 (77.22%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 1  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDS 60
          M+SSV CK +IMAKSID + FA T+ +   SRFA NRVS IDSRL KSRICGVRASMVDS
Sbjct: 1  MSSSVCCKSVIMAKSIDSKGFACTRTVSICSRFAANRVSLIDSRLFKSRICGVRASMVDS 60

Query: 61 YGSSDFVKRMEQAWEISQE 80
          YGSSDFVKRMEQAWEISQ+
Sbjct: 61 YGSSDFVKRMEQAWEISQQ 79

[Close]
BLAST of HG10014321 vs. ExPASy TrEMBL
Match: A0A1S3BVK1 (chaperone protein DnaJ OS=Cucumis melo OX=3656 GN=LOC103493730 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.7e-23
Identity = 61/79 (77.22%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 1  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDS 60
          M+SSV CK +IMAKSIDG+ F ST+ +   SRFA  RVS IDSRL KSRICGVRASMVDS
Sbjct: 1  MSSSVCCKSVIMAKSIDGKGFPSTRTVSICSRFAAIRVSLIDSRLFKSRICGVRASMVDS 60

Query: 61 YGSSDFVKRMEQAWEISQE 80
          YGSSDFVKRMEQAWEISQ+
Sbjct: 61 YGSSDFVKRMEQAWEISQQ 79

[Close]
BLAST of HG10014321 vs. ExPASy TrEMBL
Match: A0A6J1CHM4 (uncharacterized protein LOC111011719 OS=Momordica charantia OX=3673 GN=LOC111011719 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 7.5e-19
Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 0 

Query: 1  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDS 60
          M S V C+P+  AK IDGR F ST+I+  G+ FA   +SF DS++L  RICGVRASMVDS
Sbjct: 1  MASCVCCRPVNTAKPIDGRGFVSTRIVPIGAGFAAPHLSFNDSKILSPRICGVRASMVDS 60

Query: 61 YGSSDFVKRMEQAWEISQE 80
          +GSSDF KRMEQAWEISQ+
Sbjct: 61 HGSSDFAKRMEQAWEISQQ 79

The following BLAST results are available for this feature:
BLAST of HG10014321 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649933.11.3e-3353.01hypothetical protein Csa_011967 [Cucumis sativus][more]
XP_022977132.13.8e-2578.48uncharacterized protein LOC111477293 [Cucurbita maxima][more]
KAG7024403.16.5e-2578.48hypothetical protein SDJN02_13217 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022935899.16.5e-2578.48uncharacterized protein LOC111442664 [Cucurbita moschata][more]
KAG6591516.16.5e-2578.48hypothetical protein SDJN03_13862, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of HG10014321 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of HG10014321 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IHL01.8e-2578.48uncharacterized protein LOC111477293 OS=Cucurbita maxima OX=3661 GN=LOC111477293... [more]
A0A6J1F6R23.2e-2578.48uncharacterized protein LOC111442664 OS=Cucurbita moschata OX=3662 GN=LOC1114426... [more]
A0A0A0L4787.8e-2477.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651790 PE=4 SV=1[more]
A0A1S3BVK11.7e-2377.22chaperone protein DnaJ OS=Cucumis melo OX=3656 GN=LOC103493730 PE=4 SV=1[more]
A0A6J1CHM47.5e-1964.56uncharacterized protein LOC111011719 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
BLAST of HG10014321 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10014321.1HG10014321.1mRNA