HG10014320 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10014320
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein FAM33A
Location	Chr02: 9583643 .. 9587862 (+)
RNA-Seq Expression	HG10014320
Synteny	HG10014320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTTCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTCACCAAGGCCAATCACGATCTCTCGGTGGTTCAGTACAGGCTCGAGAAGGAGTTTCAGCAAATATATCCTGAGAGCGTAAGATCAACACGATCTTTTTCTTTTTCTTCTTCTTCTACTCGTTGATTGAATGAAGGCACTAATTAGATTAAGGAGGAAGTTTTAGGGCTTGAAATGAATGTAGAATTGTTTACGTCTCTCTTTCGTGTTAGTATTTCACAGTTCTAGTACCAGATCTTTGAGCTTAATGTATAATTACTTCATTCTACAGCGTGAGAGCATCATAGGCTTTCTCTATCTTCTTAGCATCATAGGCTTTCTCTATCTTCTTAATTGAGGCACCGTTTGGTTTGAGGATGGAGTTGAAGATGTGGAGCTCTATGTTTGAACTATTTTGTTCTTTCTTTGCTGTTATTTCACTGTACTAACACAAGATCATGAGCTTAATGTAGAATTATTCAATTCGACAGCGTAGGAACAAGTAATCTATCATGACAGAGTAAGAGCAACATATGTTTTTCTTCTTCTTCTAATTTTTCTTCTGAGTGGAGGCACTATTTGGATTGAGGAGGACATTCGAGTTATTGAGCTTAATGAAGATTTATTTCATTATCTTTTGGCTATTGGCATTTCACAAAGATCTTCAGCTGCTCATGAGCTAAACGTAGAATTATTTCGTTCTACAGTGTAAGAGCAAGGAATCTATCACGACAGGGTTGGAGCAACAATTTTTTTTTTTAATTTTTTGTCGAGGCACTATTTGGTTGGAGGAGGAAGTAGTAGCTAGATTTTGCGCTTAATGAAGAGTGATTTCATTCTTCTATTAGAACCGCAGTACTATTGCAAGATTTTGAGGTTATCGTAGAATTGTGAATTGTTCCCTTCTCTCTTGCCAGTCAGTTTATTTCATACTACTAACCAACAGTATGTTGTGGTTATTGATTTTAAAAGGTTCGTGTCACAGAATAAATATTGTTTGTTCTGAGTTTGAATTTCGTAATTTTCAGGTCGAAGTTTTGGAAAATTTGTTCACCCACACTTTCTTCATTTTCGAAATTCTGATTCTAGTAAGCTTTTTTATGCTTGGTAACACGTCGGATTATTGCTGTTTGTTTCTCTATAATGTATGCAACTATGTGGCAGTGAAAATGGATTCAAGCACACTTTATGATAAAGATTGTTCGGTCTTTGTTTGACGGTTGAGACTAGGAATTCTCTTAGAACATGTAATGGGATGGGGCTTAAATATGTTGTACAAAATATACGTCGTTGCTGCACAAAGTTAGCCACAGATTAATGTGGAATTCGGTCTCATATTTTCCTCCATATTCTTTCTAGAAAATACAAACACGAATCTGTTGTTGCTCAAGTGGTGGTTTTCATTCAAGATTTTGTAAATTGTTTACAGGCGAATCCAATGAAGTTAGTTTCAAGGATAAAGAAGATACGAGATGATATATCAACCTTGAAAGAGCAGTGCCGTGAAGTTTTGATGGCCAAACAGGTACTTTTCTTCATTTACTTTCTCCAGAAAAGTATTGACTAAAGGAAACATACGCGTTTAAATTGTTAGATCATGCTCTATATATAAAGTTTTTTTCCCCTCAAGTATTAGGTCGGCAACTCTATTTCACTTAGATTCAATGTGATGAAATGTTGATATATTATATCTAGAAAAATGATAATATGAAGTTTGGGAATTTGATGTCTGATGAAAATAGGATGAATTGTATTTGGTGGCCGGTGGGTGGAAATGTGATTTAGATTTTTATTATATATAAGTTAAAATCTAATGGTATGCTTAATAATATTTACATCGAGAATAATTTGTTTAACGTGCACACTGAATTCAAAATTATTTCTAACAAATAATTATAAATGAGACTACGGTTTCTTTTAATAACCACATTGTTTATAGTTTCTGGTTTTGAAATTTATGATTGTTCCTTCTCAATCTTTTTACCATAGTTTCACTTTCTTGGAGAAATATTTGATTTTTTTTTTTTTGAAACGGAAACTAGGAGAAATATTTGAATTCTGAGTCAAATTTCAAAAACAAAAACAAGTTTTCAAAATTGTATCTTTTAGTTTTCAAAATTTGGCTTGGTTATTGATAACATGGATAGATTGTGGATAACAAAACAAACAAACTTATAGGTGAAATAGTAGTGTTTATAAGTTTAATTTCTAAAAATTAAAACTAGGACTTCGTTTGATAACCATTTGGTTTTAAATTTTTTGCTTTTGAAAATTAAGTTTATAAACATTACTCTTTCACATATAAGTTTCTTTGTTTTATTATTTACTTTCTAATATTGTTTTCAAAAAGCAACCCAAGTTTTGAAAAAATAGAACAGAATTTTAGTTAATGTATTGATAGTTGGTGCCTCTTTTACTCTTTTATCGGAGGACGAGGATTCAAAAAGACATTGGTAATTGGAGGAACGGCTTTGACAATTACACTTTTTTTTCTTGTTCTGGAACTGAAGTCGGTTGGACTTGATACCTTTTACTAATTTTTTTTTAGAAGGAATGACCCTGACTTGTACTGTATTATTCTTGATCTGGAACTGGGATTGAGTGATTGCAATACCTATTCTGCTAATTTATGCAACGATGATGTCCTGTTCAAATGCAGGATGTAATTGATAAGGCACGGACGGTTCTGGTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCGTCCCCTTTGTGAGCGATCTCGATGATTCTGCATTTGTGCAATTCAAGCAGGTATTCATTGTTAATGTCCCTTGGTTTGCATTTTGTGGTCAGTACTCGTGCAACGCATTGATTATTCATTTGGCAATAGCCTGAATTCCTTTACTATGCTTGTGCAAAAGATTGCAGCTTTTAGATTTCATGTCACCCTGTACTCATAGTCTTATCTTAAGTTTTTGGTGTACCTCTTCTTTGTGCCATTTCATTTTTCACTTAACATCTGTACAAAGCTAATACAAGGTTCTTATTTATTCAAAATTTTATTCTTCTTTAGCTATTAGAAATGTTAACGCAGTGAAGTGGACATTTTTGTCTCAAGTGCTCTATTATCTGCTTTATCGTGATTTAAAAGGTTGCAATTTCCAATTGGTGCGTATAGTATTTGTACCATTTGCCAGCAAGCAACCAATATTAAATATGCAAAAGGCTTTTCTTAGGATTTGATATCCACATTAGATGGTATTGTGGGTATTTCGATCTTTTGGATAAAGCTTACACAACCAAATGTCTCACCCTCTCCATGTAGAAGCGTCGTGTTTTTAAGTATTTGCAGAGTCATTGTTTAATGCTAAACCATTTCCTGAATTCCCTCCTGCAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAATTTGGTAAGGATTCTTTTCAAGCTTTCTACAGACATTCCGATGCAGATAAATTGTTTGTGCTTATTAGCAAATGGGCATGCATAGTTCGTTACTTGCTGCTTAATTAGTATTTACGATCTAAATTTAGAACCAAATCGAATTCCAACTTTCAACCTTCCCAGTAAAAAATCAAGTCACTACCACTCGAATCATAGATTATAGTTTTTTTCCCCTCAATATGGAGTGAAAGAATCAAACTTCTGATCTTGTAGGATGAAGGAATCAAATTTCTGATCTCGAAGTCGATAGTAAGCTTTATGTAGATTGAGCTATGCTCATGTTGGCATTGATTACCGTTATCCCCCTATCCGTTCTGGCACTTAGTTAATGTTTAGACCTATCCCATCTTTTAAACTCTAGCCAATTTACGAAAATGTTAAAAAATATATATATATGTGATGACAACCCTAAAAAGTTCAATAATGGTTGCATTTGCTGCAATGTCGAAACTAAAGTTTGTTTCTCCTTTCTTACTTAACTTTTCGTTGTGTTTTCCTTAAAAATATGGGGATTATGAGTTTTTTTCTTTTCACCGATTATGAATGAAGATCAAACTATTGACTTTTAAGATGGTAATTAGAATCATCTGAAATTTTATTTTGGATATGTTCAAATGTGTTAATATTATATGTGTGTGCAAATTGTGTGTTGGCGCTAATGCAGGGGAAGATGGCCAAGAGGAAGCCGACTGTAATGACGTCAACAAGTTGCTATTCTCAGCCGTTGTGCAGGCATGA

mRNA sequence

ATGGGGTTCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTCACCAAGGCCAATCACGATCTCTCGGTGGTTCAGTACAGGCTCGAGAAGGAGTTTCAGCAAATATATCCTGAGAGCGCGAATCCAATGAAGTTAGTTTCAAGGATAAAGAAGATACGAGATGATATATCAACCTTGAAAGAGCAGTGCCGTGAAGTTTTGATGGCCAAACAGGATGTAATTGATAAGGCACGGACGGTTCTGGTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCGTCCCCTTTGTGAGCGATCTCGATGATTCTGCATTTGTGCAATTCAAGCAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAATTTGGGGAAGATGGCCAAGAGGAAGCCGACTGTAATGACGTCAACAAGTTGCTATTCTCAGCCGTTGTGCAGGCATGA

Coding sequence (CDS)

ATGGGGTTCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTCACCAAGGCCAATCACGATCTCTCGGTGGTTCAGTACAGGCTCGAGAAGGAGTTTCAGCAAATATATCCTGAGAGCGCGAATCCAATGAAGTTAGTTTCAAGGATAAAGAAGATACGAGATGATATATCAACCTTGAAAGAGCAGTGCCGTGAAGTTTTGATGGCCAAACAGGATGTAATTGATAAGGCACGGACGGTTCTGGTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCGTCCCCTTTGTGAGCGATCTCGATGATTCTGCATTTGTGCAATTCAAGCAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAATTTGGGGAAGATGGCCAAGAGGAAGCCGACTGTAATGACGTCAACAAGTTGCTATTCTCAGCCGTTGTGCAGGCATGA

Protein sequence

MGFDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDSAFVQFKQITEEWTTQVQSKFGEDGQEEADCNDVNKLLFSAVVQA

Homology

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BLAST of HG10014320 vs. NCBI nr
Match: XP_038898183.1 (spindle and kinetochore-associated protein 2 [Benincasa hispida] >XP_038898184.1 spindle and kinetochore-associated protein 2 [Benincasa hispida])

HSP 1 Score: 290.8 bits (743), Expect = 6.9e-75
Identity = 147/156 (94.23%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MGFDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIRD 60
           M  DHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIRD
Sbjct: 1   MVLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDSAFVQFKQI 120
           DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQK+QASMGVPFVSDLDD AF +FKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKLQASMGVPFVSDLDDPAFAEFKQI 120

Query: 121 TEEWTTQVQSKFGEDGQEEADCNDVNKLLFSAVVQA 157
           TEEWT QVQSKFGEDGQE+AD NDVNKLLFSAVVQA
Sbjct: 121 TEEWTRQVQSKFGEDGQEDADYNDVNKLLFSAVVQA 156

[Close]

BLAST of HG10014320 vs. NCBI nr
Match: KAG6591515.1 (hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.9 bits (725), Expect = 8.5e-73
Identity = 142/155 (91.61%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MGFDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIRD 60
           MG DHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYP+SANPMKL  RIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDSAFVQFKQI 120
           DISTLKEQCREVLMAKQDVIDKARTVLVGNRNM+ KMQASMG PFVSD DD AFVQFKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKFGEDGQEEADCNDVNKLLFSAVVQ 156
           TEEWTTQVQSK GEDGQE+A+C+DVNKLLFSAVVQ
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAECSDVNKLLFSAVVQ 155

[Close]

BLAST of HG10014320 vs. NCBI nr
Match: XP_022141272.1 (spindle and kinetochore-associated protein 2 [Momordica charantia])

HSP 1 Score: 280.4 bits (716), Expect = 9.4e-72
Identity = 139/154 (90.26%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MGFDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIRD 60
           MG  HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKIRD
Sbjct: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDSAFVQFKQI 120
           DISTL+EQCRE+LMAKQDVIDKARTVLVGNRNMLQKMQASMG+P VSDLDD AF QFK+I
Sbjct: 61  DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI 120

Query: 121 TEEWTTQVQSKFGEDGQEEADCNDVNKLLFSAVV 155
           TEEWTTQVQSK G+DGQE+AD NDVNKLLFSAVV
Sbjct: 121 TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV 154

[Close]

BLAST of HG10014320 vs. NCBI nr
Match: XP_022935897.1 (spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71
Identity = 141/155 (90.97%), Postives = 146/155 (94.19%), Query Frame = 0


Query: 1   MGFDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIRD 60
           MG DHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYP+SANPMKL  RIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDSAFVQFKQI 120
           DISTLKEQCREVLMAKQDVIDKARTVLVGNRNM+ KMQASMG PFVSD DD AFVQFKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKFGEDGQEEADCNDVNKLLFSAVVQ 156
           TEEWTTQVQSK GEDGQE+A+ +DVNKLLFSAVVQ
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQ 155

[Close]

BLAST of HG10014320 vs. NCBI nr
Match: XP_008452819.1 (PREDICTED: spindle and kinetochore-associated protein 2 [Cucumis melo] >KAA0064565.1 spindle and kinetochore-associated protein 2 [Cucumis melo var. makuwa] >TYK20025.1 spindle and kinetochore-associated protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 276.9 bits (707), Expect = 1.0e-70
Identity = 141/157 (89.81%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MGFD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIR 60
           MG D HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYPESANPMKLVSRIKKI+
Sbjct: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60

Query: 61  DDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDSAFVQFKQ 120
           DDISTLKEQCREVL AKQDVIDKARTVL+GNRNMLQKMQASMG+PFVSDLDD A  +FKQ
Sbjct: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120

Query: 121 ITEEWTTQVQSKFGEDGQEEADCNDVNKLLFSAVVQA 157
           ITEEWTTQVQSKFGED QE+ADC++VNKLLFSAVVQA
Sbjct: 121 ITEEWTTQVQSKFGEDAQEDADCSNVNKLLFSAVVQA 157

[Close]

BLAST of HG10014320 vs. ExPASy Swiss-Prot
Match: Q8WVK7 (Spindle and kinetochore-associated protein 2 OS=Homo sapiens OX=9606 GN=SKA2 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.0e-04
Identity = 37/122 (30.33%), Postives = 59/122 (48.36%), Query Frame = 0


Query: 14  DGLTNLFTKANHDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIRDDISTLKEQCR 73
           D L  +F KA  DL  +QYRLE E +  +P+SA   NP+ L+  +  I+    TL  + +
Sbjct: 6   DKLELMFQKAESDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSVIKSRYQTLYARFK 65

Query: 74  EVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDSAFVQFKQITEEWTTQVQS 133
            V + +++   +    +    NM+QK+Q        +DL+ S   +     EE T   Q 
Sbjct: 66  PVAVEQKESKSRICATVKKTMNMIQKLQKQ------TDLELSPLTK-----EEKTAAEQF 116

[Close]

BLAST of HG10014320 vs. ExPASy Swiss-Prot
Match: Q4R8E8 (Spindle and kinetochore-associated protein 2 OS=Macaca fascicularis OX=9541 GN=SKA2 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.9e-04
Identity = 26/88 (29.55%), Postives = 47/88 (53.41%), Query Frame = 0


Query: 14 DGLTNLFTKANHDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIRDDISTLKEQCR 73
          D L  +F KA  DL  +QYRLE E +  +P+SA   NP+ L+  +  ++    TL  + +
Sbjct: 6  DKLELMFQKAESDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSALKSRYQTLYARFK 65

Query: 74 EVLMAKQDVIDKARTVLVGNRNMLQKMQ 99
           V + +++   +    +    N++QK+Q
Sbjct: 66 PVAVEQKETKSRICATVNKTMNVIQKLQ 93

[Close]

BLAST of HG10014320 vs. ExPASy Swiss-Prot
Match: Q2TBY0 (Spindle and kinetochore-associated protein 2 OS=Bos taurus OX=9913 GN=SKA2 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 6.7e-04
Identity = 29/90 (32.22%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 14 DGLTNLFTKANHDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIRDDISTLKEQCR 73
          D L  +F KA+ DL  +QYRLE E +  YP+SA   NP+ L+  +  I+    TL  + +
Sbjct: 6  DKLELMFQKADSDLDYIQYRLEYEIKTNYPDSAGKKNPVTLLKELSAIKSRYQTLHVRFK 65

Query: 74 EVLMAKQDVIDKARTVLVGNRNM--LQKMQ 99
           + + +++   K+R     N+ M  +Q++Q
Sbjct: 66 PIAVEQKET--KSRICATFNKTMTLIQELQ 93

[Close]

BLAST of HG10014320 vs. ExPASy TrEMBL
Match: A0A6J1CJF1 (Protein FAM33A OS=Momordica charantia OX=3673 GN=LOC111011710 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.5e-72
Identity = 139/154 (90.26%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MGFDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIRD 60
           MG  HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKIRD
Sbjct: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDSAFVQFKQI 120
           DISTL+EQCRE+LMAKQDVIDKARTVLVGNRNMLQKMQASMG+P VSDLDD AF QFK+I
Sbjct: 61  DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI 120

Query: 121 TEEWTTQVQSKFGEDGQEEADCNDVNKLLFSAVV 155
           TEEWTTQVQSK G+DGQE+AD NDVNKLLFSAVV
Sbjct: 121 TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV 154

[Close]

BLAST of HG10014320 vs. ExPASy TrEMBL
Match: A0A6J1F6V9 (Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.9e-72
Identity = 141/155 (90.97%), Postives = 146/155 (94.19%), Query Frame = 0


Query: 1   MGFDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIRD 60
           MG DHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYP+SANPMKL  RIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDSAFVQFKQI 120
           DISTLKEQCREVLMAKQDVIDKARTVLVGNRNM+ KMQASMG PFVSD DD AFVQFKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKFGEDGQEEADCNDVNKLLFSAVVQ 156
           TEEWTTQVQSK GEDGQE+A+ +DVNKLLFSAVVQ
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQ 155

[Close]

BLAST of HG10014320 vs. ExPASy TrEMBL
Match: A0A5A7VFB8 (Protein FAM33A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001430 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.0e-71
Identity = 141/157 (89.81%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MGFD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIR 60
           MG D HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYPESANPMKLVSRIKKI+
Sbjct: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60

Query: 61  DDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDSAFVQFKQ 120
           DDISTLKEQCREVL AKQDVIDKARTVL+GNRNMLQKMQASMG+PFVSDLDD A  +FKQ
Sbjct: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120

Query: 121 ITEEWTTQVQSKFGEDGQEEADCNDVNKLLFSAVVQA 157
           ITEEWTTQVQSKFGED QE+ADC++VNKLLFSAVVQA
Sbjct: 121 ITEEWTTQVQSKFGEDAQEDADCSNVNKLLFSAVVQA 157

[Close]

BLAST of HG10014320 vs. ExPASy TrEMBL
Match: A0A1S3BUQ8 (Protein FAM33A OS=Cucumis melo OX=3656 GN=LOC103493729 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.0e-71
Identity = 141/157 (89.81%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MGFD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIR 60
           MG D HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYPESANPMKLVSRIKKI+
Sbjct: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60

Query: 61  DDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDSAFVQFKQ 120
           DDISTLKEQCREVL AKQDVIDKARTVL+GNRNMLQKMQASMG+PFVSDLDD A  +FKQ
Sbjct: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120

Query: 121 ITEEWTTQVQSKFGEDGQEEADCNDVNKLLFSAVVQA 157
           ITEEWTTQVQSKFGED QE+ADC++VNKLLFSAVVQA
Sbjct: 121 ITEEWTTQVQSKFGEDAQEDADCSNVNKLLFSAVVQA 157

[Close]

BLAST of HG10014320 vs. ExPASy TrEMBL
Match: A0A0A0L5I9 (Protein FAM33A OS=Cucumis sativus OX=3659 GN=Csa_4G651780 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.1e-70
Identity = 143/158 (90.51%), Postives = 150/158 (94.94%), Query Frame = 0


Query: 1   MGFD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIR 60
           MG D HL QHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYPESANPMKLVSRIKKI+
Sbjct: 1   MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60

Query: 61  DDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDSAFVQFKQ 120
           DDISTLKEQCREVL+AKQDVID+ARTVL+GNRNMLQKMQASMG+PFVSDLDD AF +FKQ
Sbjct: 61  DDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQASMGIPFVSDLDDPAFSEFKQ 120

Query: 121 ITEEWTTQVQSKF-GEDGQEEADCNDVNKLLFSAVVQA 157
           ITEEWTTQVQSKF GEDGQE+ADCNDVNKLLFSAVVQA
Sbjct: 121 ITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQA 158

[Close]

BLAST of HG10014320 vs. TAIR 10
Match: AT2G24970.1 (unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 164.5 bits (415), Expect = 7.0e-41
Identity = 83/148 (56.08%), Postives = 113/148 (76.35%), Query Frame = 0


Query: 7   HQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIRDDISTLK 66
           + HHQA D L N+F++A+HDL+VV  +L+KEFQQ+YP +ANPMKL+ RIKK+++D++ LK
Sbjct: 4   NHHHQAVDNLLNVFSRASHDLTVVHSKLDKEFQQMYPANANPMKLIQRIKKLQEDVTLLK 63

Query: 67  EQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDSAFVQFKQITEEWTT 126
            QC ++L AKQD+IDKA+T LVGN N++QKM AS+G     D DD A   F QI +EWT 
Sbjct: 64  HQCLDLLSAKQDLIDKAQTTLVGNCNLIQKMNASLGESTNGDTDD-ALADFNQIIDEWTM 123

Query: 127 QVQSK-FGEDGQEEADCNDVNKLLFSAV 154
           QV+S+  GE   E+AD  D+NK+LFSA+
Sbjct: 124 QVRSRTVGE--TEDADKEDINKMLFSAI 148

The following BLAST results are available for this feature:

BLAST of HG10014320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898183.1	6.9e-75	94.23	spindle and kinetochore-associated protein 2 [Benincasa hispida] >XP_038898184.1...	[more]
KAG6591515.1	8.5e-73	91.61	hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022141272.1	9.4e-72	90.26	spindle and kinetochore-associated protein 2 [Momordica charantia]	[more]
XP_022935897.1	1.2e-71	90.97	spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata]	[more]
XP_008452819.1	1.0e-70	89.81	PREDICTED: spindle and kinetochore-associated protein 2 [Cucumis melo] >KAA00645...	[more]

BLAST of HG10014320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8WVK7	1.0e-04	30.33	Spindle and kinetochore-associated protein 2 OS=Homo sapiens OX=9606 GN=SKA2 PE=...	[more]
Q4R8E8	3.9e-04	29.55	Spindle and kinetochore-associated protein 2 OS=Macaca fascicularis OX=9541 GN=S...	[more]
Q2TBY0	6.7e-04	32.22	Spindle and kinetochore-associated protein 2 OS=Bos taurus OX=9913 GN=SKA2 PE=2 ...	[more]

BLAST of HG10014320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CJF1	4.5e-72	90.26	Protein FAM33A OS=Momordica charantia OX=3673 GN=LOC111011710 PE=3 SV=1	[more]
A0A6J1F6V9	5.9e-72	90.97	Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1	[more]
A0A5A7VFB8	5.0e-71	89.81	Protein FAM33A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00143...	[more]
A0A1S3BUQ8	5.0e-71	89.81	Protein FAM33A OS=Cucumis melo OX=3656 GN=LOC103493729 PE=3 SV=1	[more]
A0A0A0L5I9	1.1e-70	90.51	Protein FAM33A OS=Cucumis sativus OX=3659 GN=Csa_4G651780 PE=3 SV=1	[more]

BLAST of HG10014320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24970.1	7.0e-41	56.08	unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042091	Ska2, N-terminal	PFAM	PF16740	SKA2	coord: 10..117 e-value: 3.6E-41 score: 139.4
None	No IPR available	GENE3D	6.10.250.1380		coord: 10..124 e-value: 6.7E-27 score: 95.7
IPR026762	Spindle and kinetochore-associated protein 2	PANTHER	PTHR32017	SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 2	coord: 12..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10014320.1	HG10014320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0007059	chromosome segregation
biological_process	GO:0000278	mitotic cell cycle
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000940	outer kinetochore
cellular_component	GO:0005876	spindle microtubule
molecular_function	GO:0008017	microtubule binding