HG10014189 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10014189
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	LOB domain-containing protein
Location	Chr02: 8295442 .. 8296136 (-)
RNA-Seq Expression	HG10014189
Synteny	HG10014189

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTGCAACGGTTGCAGAGTGCTTCGAAAGGGCTGCAGTGAAACGTGCGTTTTAAGGTCAAGTCTCCATTGGATTGATTCTCCGGAAGCCCAAGGCAACGCAACTCTGTTTCTTGCTAAATTCTTCGGTCGTAGTGATCTCTTGTCCTTCATCTCCGCCGTTCCTTATCATCAAAGACCTGGTAACTTTCTTTTTCTTTACTACCCACCTCTTTAATTCCCCAATCAATCGACTCTCAGATTTCCCCTGTTTCTTTTTTTAAAGCTCTGTTTCAGTCTCTGTTATTCGAAGCTTGTGGCCGCACGGTTAACCCAGTTAGCGGAGCCGTTGGTCTCTTGTCCAGTGGGAACTGGCACGTTTGTCAAGCGGCGGTGGATACCGTTCTCAACGGCGGAGTTCTCCGCCCAATACCCGGAATCGAAATTTCTGGAAATCCCACGCCCAACGTCGATGATTCATCGCTTACTTTCAATACCGATGTCTGGACTACCACCACACACAATCTTCAATTTTACCCATCTACTCCGTCAAATTTCCGGTGCTTTCCCGATCTCGCTCTCGGCAGAGCGAAGAATCATCCGTTGGAGAATCGGCGGTCTCTTGATTCCGAAGAGTCGGTCATGACCAGCTTCGGAAGCGGCGATCACGGCGACCGACGGAAAGAGACGAAGCTTTTGAACTTATTCGTCTGA

mRNA sequence

ATGAGTTGCAACGGTTGCAGAGTGCTTCGAAAGGGCTGCAGTGAAACGTGCGTTTTAAGGTCAAGTCTCCATTGGATTGATTCTCCGGAAGCCCAAGGCAACGCAACTCTGTTTCTTGCTAAATTCTTCGGTCGTAGTGATCTCTTGTCCTTCATCTCCGCCGTTCCTTATCATCAAAGACCTGCTCTGTTTCAGTCTCTGTTATTCGAAGCTTGTGGCCGCACGGTTAACCCAGTTAGCGGAGCCGTTGGTCTCTTGTCCAGTGGGAACTGGCACGTTTGTCAAGCGGCGGTGGATACCGTTCTCAACGGCGGAGTTCTCCGCCCAATACCCGGAATCGAAATTTCTGGAAATCCCACGCCCAACGTCGATGATTCATCGCTTACTTTCAATACCGATGTCTGGACTACCACCACACACAATCTTCAATTTTACCCATCTACTCCGTCAAATTTCCGGTGCTTTCCCGATCTCGCTCTCGGCAGAGCGAAGAATCATCCGTTGGAGAATCGGCGGTCTCTTGATTCCGAAGAGTCGGTCATGACCAGCTTCGGAAGCGGCGATCACGGCGACCGACGGAAAGAGACGAAGCTTTTGAACTTATTCGTCTGA

Coding sequence (CDS)

ATGAGTTGCAACGGTTGCAGAGTGCTTCGAAAGGGCTGCAGTGAAACGTGCGTTTTAAGGTCAAGTCTCCATTGGATTGATTCTCCGGAAGCCCAAGGCAACGCAACTCTGTTTCTTGCTAAATTCTTCGGTCGTAGTGATCTCTTGTCCTTCATCTCCGCCGTTCCTTATCATCAAAGACCTGCTCTGTTTCAGTCTCTGTTATTCGAAGCTTGTGGCCGCACGGTTAACCCAGTTAGCGGAGCCGTTGGTCTCTTGTCCAGTGGGAACTGGCACGTTTGTCAAGCGGCGGTGGATACCGTTCTCAACGGCGGAGTTCTCCGCCCAATACCCGGAATCGAAATTTCTGGAAATCCCACGCCCAACGTCGATGATTCATCGCTTACTTTCAATACCGATGTCTGGACTACCACCACACACAATCTTCAATTTTACCCATCTACTCCGTCAAATTTCCGGTGCTTTCCCGATCTCGCTCTCGGCAGAGCGAAGAATCATCCGTTGGAGAATCGGCGGTCTCTTGATTCCGAAGAGTCGGTCATGACCAGCTTCGGAAGCGGCGATCACGGCGACCGACGGAAAGAGACGAAGCTTTTGAACTTATTCGTCTGA

Protein sequence

MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQRPALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIPGIEISGNPTPNVDDSSLTFNTDVWTTTTHNLQFYPSTPSNFRCFPDLALGRAKNHPLENRRSLDSEESVMTSFGSGDHGDRRKETKLLNLFV

Homology

[Close]

BLAST of HG10014189 vs. NCBI nr
Match: XP_038899091.1 (LOB domain-containing protein 39-like [Benincasa hispida])

HSP 1 Score: 397.9 bits (1021), Expect = 5.3e-107
Identity = 191/203 (94.09%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSCNGCRVLRKGCSETCVLR SLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR
Sbjct: 1   MSCNGCRVLRKGCSETCVLRGSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIPGIEISGNPT 120
           PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAA DTVLNGGVLRPIPG EISGN T
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTVLNGGVLRPIPGFEISGNLT 120

Query: 121 PNVDDSSLTFNTDVWTTTTHNLQFYPSTPSNFRCFPDLALGRAKNHPLENRRSLDSEESV 180
           PN+D+S LTFNTDVWTTTTHNLQFYPSTPS+FRC PDL+LGR KNHPLENRRSLDSEESV
Sbjct: 121 PNLDESLLTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLSLGRGKNHPLENRRSLDSEESV 180

Query: 181 MTSFGSGDHGDRRKETKLLNLFV 204
           MTSFGSGD GDRRKETKLLNLFV
Sbjct: 181 MTSFGSGDVGDRRKETKLLNLFV 203

[Close]

BLAST of HG10014189 vs. NCBI nr
Match: XP_008452637.1 (PREDICTED: LOB domain-containing protein 39-like [Cucumis melo] >KAA0064436.1 LOB domain-containing protein 39-like [Cucumis melo var. makuwa])

HSP 1 Score: 394.8 bits (1013), Expect = 4.4e-106
Identity = 188/203 (92.61%), Postives = 193/203 (95.07%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSCNGCRVLRKGCSE CVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIPGIEISGNPT 120
           PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAA DT+LNGGVLRPIPGIEISGNPT
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTILNGGVLRPIPGIEISGNPT 120

Query: 121 PNVDDSSLTFNTDVWTTTTHNLQFYPSTPSNFRCFPDLALGRAKNHPLENRRSLDSEESV 180
           PN+DDSS TFN DVWTTTTHNLQFYPSTPS+FRC PDL L R K HPLENRRSLDSEESV
Sbjct: 121 PNLDDSSFTFNNDVWTTTTHNLQFYPSTPSDFRCLPDLGLNRTKKHPLENRRSLDSEESV 180

Query: 181 MTSFGSGDHGDRRKETKLLNLFV 204
           MTSFGSGD G++RKETKLLNLFV
Sbjct: 181 MTSFGSGDLGEQRKETKLLNLFV 203

[Close]

BLAST of HG10014189 vs. NCBI nr
Match: XP_004141401.1 (LOB domain-containing protein 39 [Cucumis sativus] >KGN55262.1 hypothetical protein Csa_012579 [Cucumis sativus])

HSP 1 Score: 393.7 bits (1010), Expect = 9.9e-106
Identity = 192/205 (93.66%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSCNGCRVLRKGCSE CVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIPGIEISGNPT 120
           PALFQSLLFEACGRTVNPVSGAVGLLS+GNWHVCQAA DT+LNGGVLRPIPGIEIS NPT
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSTGNWHVCQAAADTILNGGVLRPIPGIEISANPT 120

Query: 121 PNVDDSSLTFNTDVWTTTT-HNLQFYPSTPSNFRCFPDLALGRAKN-HPLENRRSLDSEE 180
           PN+DDSSLTFNTDVWTTTT HNLQFYPSTPS+FRC PDL+LGRAKN HPLENRRSLDSEE
Sbjct: 121 PNLDDSSLTFNTDVWTTTTVHNLQFYPSTPSDFRCLPDLSLGRAKNHHPLENRRSLDSEE 180

Query: 181 SVMTSFGSGDHGDRRKETKLLNLFV 204
           SVMTSFGSGD GD+RKETKLLNLFV
Sbjct: 181 SVMTSFGSGDLGDQRKETKLLNLFV 205

[Close]

BLAST of HG10014189 vs. NCBI nr
Match: XP_023535944.1 (LOB domain-containing protein 39-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359.0 bits (920), Expect = 2.7e-95
Identity = 175/205 (85.37%), Postives = 188/205 (91.71%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSC+GCRVLRKGC+E CVLRSSLHWI SPEAQ NATLFLAKFFGRSDLLSFI+AVP+HQR
Sbjct: 1   MSCSGCRVLRKGCNEACVLRSSLHWIRSPEAQANATLFLAKFFGRSDLLSFIAAVPHHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIPGIEISGNPT 120
           PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQ A DTVL+GGVLRPIPGIE+SGNPT
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQLAADTVLSGGVLRPIPGIELSGNPT 120

Query: 121 PNVDDSSLTFNTDVWTTTTHNLQFYPSTPSNFRCFPDLAL--GRAKNHPLENRRSLDSEE 180
            NVDDS+LTFNTDVWTTT  NLQ YPSTPS+FRC PDLA+  GRAKNH LENRRSLDSE+
Sbjct: 121 RNVDDSTLTFNTDVWTTTAQNLQLYPSTPSDFRCLPDLAVAAGRAKNHTLENRRSLDSED 180

Query: 181 SVMTSFGSGDHGDRRKETKLLNLFV 204
           S+MTSFGS   GDRRK+ KLLNLF+
Sbjct: 181 SIMTSFGS---GDRRKQRKLLNLFI 202

[Close]

BLAST of HG10014189 vs. NCBI nr
Match: KAG7024296.1 (LOB domain-containing protein 38, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 355.1 bits (910), Expect = 3.9e-94
Identity = 174/205 (84.88%), Postives = 187/205 (91.22%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSC+GCRVLRKGC+E CVLRSSLHWI SPEAQ NATLFLAKFFGRSDLLSFI+AVP+HQR
Sbjct: 1   MSCSGCRVLRKGCNEACVLRSSLHWIHSPEAQANATLFLAKFFGRSDLLSFIAAVPHHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIPGIEISGNPT 120
           PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQ A +TVL+GGVLRPIPGIE+SGNPT
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQLAAETVLSGGVLRPIPGIELSGNPT 120

Query: 121 PNVDDSSLTFNTDVWTTTTHNLQFYPSTPSNFRCFPDLAL--GRAKNHPLENRRSLDSEE 180
            NVDDSSLT NTDVWTTT  NLQ YPSTPS+FRC PDLA+  GRAKNH LENRRSLDSE+
Sbjct: 121 RNVDDSSLTSNTDVWTTTGQNLQLYPSTPSDFRCLPDLAVAAGRAKNHTLENRRSLDSED 180

Query: 181 SVMTSFGSGDHGDRRKETKLLNLFV 204
           S+MTSFGS   GDRRK+ KLLNLF+
Sbjct: 181 SIMTSFGS---GDRRKQRKLLNLFI 202

[Close]

BLAST of HG10014189 vs. ExPASy Swiss-Prot
Match: Q9SZE8 (LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.5e-51
Identity = 121/240 (50.42%), Postives = 148/240 (61.67%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSCNGCRVLRKGCSETC+LR  L WI+S E+QG+AT+F+AKFFGR+ L+SFIS+VP  QR
Sbjct: 1   MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIPGIEISGNPT 120
           PALFQSLLFEACGRTVNPV+GAVG+L + NWHVCQAAV+TVL GG LRPI  +  S +  
Sbjct: 61  PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLLESPSLM 120

Query: 121 PNVDDSSLTFNTDVWTTTTHNLQFYPSTP---------SNFRCFPDLALGRAKNHPLE-- 180
            + D+SS  ++ DV    TH+ +F  S           +  R   D  L    NH L   
Sbjct: 121 ISCDESSEIWHQDVSRNQTHHCRFSTSRSTTEMKDSLVNRKRLKSDSDLDLQVNHGLTLT 180

Query: 181 --------------------NRRSLDSEESVMTS-FGSGDHGDRRK-----ETKLLNLFV 204
                               +R    SEESV TS + +G  GD ++     E KLLNLFV
Sbjct: 181 APAVPVPFLPPSSFCKVVKGDRPGSPSEESVTTSCWENGMRGDNKQKRNKGEKKLLNLFV 240

[Close]

BLAST of HG10014189 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.7e-48
Identity = 92/131 (70.23%), Postives = 110/131 (83.97%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSCNGCRVLRKGCSE C+LR  + WI+SPEAQG+AT+F+AKFFGR+ L+SFISAVP  Q 
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIP----GIEIS 120
           PALFQSLL+EACGRTVNPV+GAVGLL +GNW+VCQAAV+TVL GG L+PIP    G   +
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120

Query: 121 GNPTPNVDDSS 128
           G P+P  D++S
Sbjct: 121 GFPSPTSDEAS 131

[Close]

BLAST of HG10014189 vs. ExPASy Swiss-Prot
Match: Q9FN11 (LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.8e-46
Identity = 87/132 (65.91%), Postives = 110/132 (83.33%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSCNGCRVLRKGCSE C+LR  + WI++ +AQG+AT+F+AKFFGR+ L+SFISAVP  QR
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIP-----GIEI 120
           PALFQSLL+EACGRTVNPV+GA+G+L +GNW++CQAAV+TVL GG LRPIP     G   
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGF 120

Query: 121 SGNPTPNVDDSS 128
           +G P+P  +++S
Sbjct: 121 AGFPSPTSEEAS 132

[Close]

BLAST of HG10014189 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.0e-38
Identity = 70/110 (63.64%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSCNGCRVLRKGCSE C +R  L WI S E+Q NAT+FLAKF+GR+ L++ ++  P H R
Sbjct: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLR 62

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPI 111
           PA+F+SLL+EACGR VNP+ G+VGLL SGNWH+CQAAV+ V+ G  + PI
Sbjct: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPI 112

[Close]

BLAST of HG10014189 vs. ExPASy Swiss-Prot
Match: Q9M886 (LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.0e-36
Identity = 70/110 (63.64%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSCNGCRVLRKGCSE C +R  L WI SPEAQ NAT+FLAKF+GR+ L++ I+A P H R
Sbjct: 3   MSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNHLR 62

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPI 111
           P +F+SLL EACGR VNP+ G+VGLL SGNW +CQ AV+ V+ G  ++ I
Sbjct: 63  PGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEI 112

[Close]

BLAST of HG10014189 vs. ExPASy TrEMBL
Match: A0A5A7VDI5 (LOB domain-containing protein 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G001480 PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.2e-106
Identity = 188/203 (92.61%), Postives = 193/203 (95.07%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSCNGCRVLRKGCSE CVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIPGIEISGNPT 120
           PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAA DT+LNGGVLRPIPGIEISGNPT
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTILNGGVLRPIPGIEISGNPT 120

Query: 121 PNVDDSSLTFNTDVWTTTTHNLQFYPSTPSNFRCFPDLALGRAKNHPLENRRSLDSEESV 180
           PN+DDSS TFN DVWTTTTHNLQFYPSTPS+FRC PDL L R K HPLENRRSLDSEESV
Sbjct: 121 PNLDDSSFTFNNDVWTTTTHNLQFYPSTPSDFRCLPDLGLNRTKKHPLENRRSLDSEESV 180

Query: 181 MTSFGSGDHGDRRKETKLLNLFV 204
           MTSFGSGD G++RKETKLLNLFV
Sbjct: 181 MTSFGSGDLGEQRKETKLLNLFV 203

[Close]

BLAST of HG10014189 vs. ExPASy TrEMBL
Match: A0A1S3BVG9 (LOB domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LOC103493596 PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.2e-106
Identity = 188/203 (92.61%), Postives = 193/203 (95.07%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSCNGCRVLRKGCSE CVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIPGIEISGNPT 120
           PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAA DT+LNGGVLRPIPGIEISGNPT
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTILNGGVLRPIPGIEISGNPT 120

Query: 121 PNVDDSSLTFNTDVWTTTTHNLQFYPSTPSNFRCFPDLALGRAKNHPLENRRSLDSEESV 180
           PN+DDSS TFN DVWTTTTHNLQFYPSTPS+FRC PDL L R K HPLENRRSLDSEESV
Sbjct: 121 PNLDDSSFTFNNDVWTTTTHNLQFYPSTPSDFRCLPDLGLNRTKKHPLENRRSLDSEESV 180

Query: 181 MTSFGSGDHGDRRKETKLLNLFV 204
           MTSFGSGD G++RKETKLLNLFV
Sbjct: 181 MTSFGSGDLGEQRKETKLLNLFV 203

[Close]

BLAST of HG10014189 vs. ExPASy TrEMBL
Match: A0A0A0L3S5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G642430 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.8e-106
Identity = 192/205 (93.66%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSCNGCRVLRKGCSE CVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIPGIEISGNPT 120
           PALFQSLLFEACGRTVNPVSGAVGLLS+GNWHVCQAA DT+LNGGVLRPIPGIEIS NPT
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSTGNWHVCQAAADTILNGGVLRPIPGIEISANPT 120

Query: 121 PNVDDSSLTFNTDVWTTTT-HNLQFYPSTPSNFRCFPDLALGRAKN-HPLENRRSLDSEE 180
           PN+DDSSLTFNTDVWTTTT HNLQFYPSTPS+FRC PDL+LGRAKN HPLENRRSLDSEE
Sbjct: 121 PNLDDSSLTFNTDVWTTTTVHNLQFYPSTPSDFRCLPDLSLGRAKNHHPLENRRSLDSEE 180

Query: 181 SVMTSFGSGDHGDRRKETKLLNLFV 204
           SVMTSFGSGD GD+RKETKLLNLFV
Sbjct: 181 SVMTSFGSGDLGDQRKETKLLNLFV 205

[Close]

BLAST of HG10014189 vs. ExPASy TrEMBL
Match: A0A6J1FEE1 (LOB domain-containing protein 38-like OS=Cucurbita moschata OX=3662 GN=LOC111443315 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.1e-93
Identity = 172/205 (83.90%), Postives = 185/205 (90.24%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSC+GCRVLRKGC+E CVLRSSLHWI SPEAQ NATLFLAKFFGRSDLLSFI+AVP+HQR
Sbjct: 1   MSCSGCRVLRKGCNEACVLRSSLHWIHSPEAQANATLFLAKFFGRSDLLSFIAAVPHHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIPGIEISGNPT 120
           PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQ A +TVL+GGVLRPIPGIE+SGNPT
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQLAAETVLSGGVLRPIPGIELSGNPT 120

Query: 121 PNVDDSSLTFNTDVWTTTTHNLQFYPSTPSNFRCFPDLALG--RAKNHPLENRRSLDSEE 180
            NVDDSSLT NTDVWTTT  NLQ YPSTPS+FRC PDLA+   RAKNH  ENRRSLDSE+
Sbjct: 121 RNVDDSSLTSNTDVWTTTGQNLQLYPSTPSDFRCLPDLAVAAVRAKNHTPENRRSLDSED 180

Query: 181 SVMTSFGSGDHGDRRKETKLLNLFV 204
           S+MTSFGS   GDRRK+ KLLNLF+
Sbjct: 181 SIMTSFGS---GDRRKQRKLLNLFI 202

[Close]

BLAST of HG10014189 vs. ExPASy TrEMBL
Match: A0A6J1IIW5 (LOB domain-containing protein 39-like OS=Cucurbita maxima OX=3661 GN=LOC111477277 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.4e-89
Identity = 165/203 (81.28%), Postives = 180/203 (88.67%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSC+GCRVLRKGC+E CVLRSSLHWI SPEAQ NATLFLAKFFGRSDLLSFI+AVP+HQR
Sbjct: 1   MSCSGCRVLRKGCNEACVLRSSLHWIHSPEAQANATLFLAKFFGRSDLLSFIAAVPHHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIPGIEISGNPT 120
           PALFQSLLFEACGRTVNPVSGAVGL SSGNWHVCQ A DTVL+GGVLRPIPGIE+SGNPT
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLFSSGNWHVCQLAADTVLSGGVLRPIPGIELSGNPT 120

Query: 121 PNVDDSSLTFNTDVWTTTTHNLQFYPSTPSNFRCFPDLALGRAKNHPLENRRSLDSEESV 180
            N+DDSSLTFNTDVWTTT  NLQ YPS+PS+FRC PDLA+        +NRRSLDSE+S+
Sbjct: 121 RNLDDSSLTFNTDVWTTTAQNLQLYPSSPSDFRCLPDLAVAA---RTAKNRRSLDSEDSI 180

Query: 181 MTSFGSGDHGDRRKETKLLNLFV 204
           MTSFGS   GDRRK+ KLLNLF+
Sbjct: 181 MTSFGS---GDRRKQRKLLNLFI 197

[Close]

BLAST of HG10014189 vs. TAIR 10
Match: AT4G37540.1 (LOB domain-containing protein 39 )

HSP 1 Score: 202.2 bits (513), Expect = 3.9e-52
Identity = 121/240 (50.42%), Postives = 148/240 (61.67%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSCNGCRVLRKGCSETC+LR  L WI+S E+QG+AT+F+AKFFGR+ L+SFIS+VP  QR
Sbjct: 1   MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIPGIEISGNPT 120
           PALFQSLLFEACGRTVNPV+GAVG+L + NWHVCQAAV+TVL GG LRPI  +  S +  
Sbjct: 61  PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLLESPSLM 120

Query: 121 PNVDDSSLTFNTDVWTTTTHNLQFYPSTP---------SNFRCFPDLALGRAKNHPLE-- 180
            + D+SS  ++ DV    TH+ +F  S           +  R   D  L    NH L   
Sbjct: 121 ISCDESSEIWHQDVSRNQTHHCRFSTSRSTTEMKDSLVNRKRLKSDSDLDLQVNHGLTLT 180

Query: 181 --------------------NRRSLDSEESVMTS-FGSGDHGDRRK-----ETKLLNLFV 204
                               +R    SEESV TS + +G  GD ++     E KLLNLFV
Sbjct: 181 APAVPVPFLPPSSFCKVVKGDRPGSPSEESVTTSCWENGMRGDNKQKRNKGEKKLLNLFV 240

[Close]

BLAST of HG10014189 vs. TAIR 10
Match: AT3G49940.1 (LOB domain-containing protein 38 )

HSP 1 Score: 192.2 bits (487), Expect = 4.1e-49
Identity = 92/131 (70.23%), Postives = 110/131 (83.97%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSCNGCRVLRKGCSE C+LR  + WI+SPEAQG+AT+F+AKFFGR+ L+SFISAVP  Q 
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIP----GIEIS 120
           PALFQSLL+EACGRTVNPV+GAVGLL +GNW+VCQAAV+TVL GG L+PIP    G   +
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120

Query: 121 GNPTPNVDDSS 128
           G P+P  D++S
Sbjct: 121 GFPSPTSDEAS 131

[Close]

BLAST of HG10014189 vs. TAIR 10
Match: AT5G67420.1 (LOB domain-containing protein 37 )

HSP 1 Score: 187.2 bits (474), Expect = 1.3e-47
Identity = 87/132 (65.91%), Postives = 110/132 (83.33%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSCNGCRVLRKGCSE C+LR  + WI++ +AQG+AT+F+AKFFGR+ L+SFISAVP  QR
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPIP-----GIEI 120
           PALFQSLL+EACGRTVNPV+GA+G+L +GNW++CQAAV+TVL GG LRPIP     G   
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGF 120

Query: 121 SGNPTPNVDDSS 128
           +G P+P  +++S
Sbjct: 121 AGFPSPTSEEAS 132

[Close]

BLAST of HG10014189 vs. TAIR 10
Match: AT1G67100.1 (LOB domain-containing protein 40 )

HSP 1 Score: 158.7 bits (400), Expect = 5.0e-39
Identity = 70/110 (63.64%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSCNGCRVLRKGCSE C +R  L WI S E+Q NAT+FLAKF+GR+ L++ ++  P H R
Sbjct: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLR 62

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPI 111
           PA+F+SLL+EACGR VNP+ G+VGLL SGNWH+CQAAV+ V+ G  + PI
Sbjct: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPI 112

[Close]

BLAST of HG10014189 vs. TAIR 10
Match: AT3G02550.1 (LOB domain-containing protein 41 )

HSP 1 Score: 153.3 bits (386), Expect = 2.1e-37
Identity = 70/110 (63.64%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60
           MSCNGCRVLRKGCSE C +R  L WI SPEAQ NAT+FLAKF+GR+ L++ I+A P H R
Sbjct: 3   MSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNHLR 62

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAVDTVLNGGVLRPI 111
           P +F+SLL EACGR VNP+ G+VGLL SGNW +CQ AV+ V+ G  ++ I
Sbjct: 63  PGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEI 112

The following BLAST results are available for this feature:

BLAST of HG10014189 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899091.1	5.3e-107	94.09	LOB domain-containing protein 39-like [Benincasa hispida]	[more]
XP_008452637.1	4.4e-106	92.61	PREDICTED: LOB domain-containing protein 39-like [Cucumis melo] >KAA0064436.1 LO...	[more]
XP_004141401.1	9.9e-106	93.66	LOB domain-containing protein 39 [Cucumis sativus] >KGN55262.1 hypothetical prot...	[more]
XP_023535944.1	2.7e-95	85.37	LOB domain-containing protein 39-like [Cucurbita pepo subsp. pepo]	[more]
KAG7024296.1	3.9e-94	84.88	LOB domain-containing protein 38, partial [Cucurbita argyrosperma subsp. argyros...	[more]

BLAST of HG10014189 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZE8	5.5e-51	50.42	LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 S...	[more]
Q9SN23	5.7e-48	70.23	LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 S...	[more]
Q9FN11	1.8e-46	65.91	LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 S...	[more]
Q9ZW96	7.0e-38	63.64	LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 S...	[more]
Q9M886	3.0e-36	63.64	LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 S...	[more]

BLAST of HG10014189 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VDI5	2.2e-106	92.61	LOB domain-containing protein 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BVG9	2.2e-106	92.61	LOB domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LOC103493596 PE...	[more]
A0A0A0L3S5	4.8e-106	93.66	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G642430 PE=3 SV...	[more]
A0A6J1FEE1	6.1e-93	83.90	LOB domain-containing protein 38-like OS=Cucurbita moschata OX=3662 GN=LOC111443...	[more]
A0A6J1IIW5	1.4e-89	81.28	LOB domain-containing protein 39-like OS=Cucurbita maxima OX=3661 GN=LOC11147727...	[more]

BLAST of HG10014189 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37540.1	3.9e-52	50.42	LOB domain-containing protein 39	[more]
AT3G49940.1	4.1e-49	70.23	LOB domain-containing protein 38	[more]
AT5G67420.1	1.3e-47	65.91	LOB domain-containing protein 37	[more]
AT1G67100.1	5.0e-39	63.64	LOB domain-containing protein 40	[more]
AT3G02550.1	2.1e-37	63.64	LOB domain-containing protein 41	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 2..100 e-value: 1.6E-23 score: 83.2
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 1..107 score: 17.464848
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..191
None	No IPR available	PANTHER	PTHR31304:SF38	LOB DOMAIN-CONTAINING PROTEIN 39-LIKE	coord: 1..203
None	No IPR available	PANTHER	PTHR31304	LOB DOMAIN-CONTAINING PROTEIN 38	coord: 1..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10014189.1	HG10014189.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression