HG10014187 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10014187
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	40S ribosomal protein S29
Location	Chr02: 8262711 .. 8277079 (+)
RNA-Seq Expression	HG10014187
Synteny	HG10014187

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGGAGGCAATGGCCAGAAGGCTAAAATGGCTCGGGAGAGAAACCTGGAGAAACAAAAGTCATCCAGAGGTAATCAACCTGCCACTCAATTTTCTCAGTTTGGCTCCTCAGAAAATGATTTGTAAAGCCCATGTGATTTCTCTTGATTCCTCTTTCTGTACTCAATTTAATTAGCCTTTAGCTTGAGTAATGGAAAGTATAATTAGAAGGCTAATAATACAAAATATATGATGTACAAACATAAATTTCATTACTAGATCAATCAAATCTAGATGCTTTGCTAATTTAGATGACAAGTATGATAACTGAAATGATTATTACTGCAACCCTTATTGTTTTTCTTTCTTCTTTGTGGGGTTCTTATGATTTCCCCTGTATAAAGTTTAGAGAGTTGATTATGATTGTAATAATTTCCACAGGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAATACAGGTAAAATTCTGAGTCTTATCTTATGAACCTAATTTGTTTCCTTGAGAGGGACAAATTTTGAATCAAAAGCACCATTTTCTCAATTTTGTTAGTCCTTGTTTAAGCTTGTTGCTTGAAACTTAAAGTGTTCGTGAAAGTGGGTTATTGCGAATTGTTGCAGTGCAAGGTATGCATGCAGACATTTATATGTACAACATCAGAGGTGAAGTGCAGGGAACATGCAGAAGCAAGGCACCCAAAATCTGATGTATATGCTTGTTTTCCTCATCTTAAGAAATGATTCCAAACTCTTAACCCCCACATATGAATTATTACCTATCAATCAACTCATAGCTTTATCCTTTCCTTCTCTTTTGCAATATTAAAGCCTTCCCAAATGCTCTAGAGGCTACACGCCTTTCAATGTAATAATAACATATGCTTGTGCTCAAAAAATATATTTTGATAAAGATCCAACATTTATTTCTTATTTTTCTTTACTTGAACAACTAGAACTGTAGATCAACTTGCAAATGTTTGGCGAATGTTTCTAATAATTAATCGCCTAACACTTGTAGAAAATATGTTTTGCAAATTTTCCAATAGTATTGGTCAATGATTTCAAAATCTGATCGGATTGAACATAATTGAGTTATTGTCTTTAGAGATTAATAGTTTGGTATTTTGGCTGCCTAATTTTGAGAAAAATCGTCAATAATTTCACGTTAAATTTTAGATTCTACATGTTTTTATGTTAATGTATTTTAGAAGATATATTATTATATTTCTGTTGATAAGGTACAATTTAAAAAAAAAAAAATTTGAATCATGTATTTATCTTTCTTTCTTTCTTTTAATATGTTGTATCATTTTCCCTTCTATTGGTGAAACACCTGTATTTCTTACAATTAAATTTTATCGAAAAGAATCATCTGTGGACGCTACAGATGGCAACAAGTTGCATTGAAATCAAATCAACGGCTCTGATTAAAAGCAGTTATTTAAATGATCTTATTTCATATTTCATAAGATCGAGTATGAGCGATTAGTACAATGGGTCCCACTTGTAGATTCTGAAATTAGGTCAATATATTTTTGTGATATAGTTCTTTTAATTACTCGATGTCGAAAATATTTATTTCAAAATGAAAAATGAATATTATAAGTCGTGTATTCATAATAAGGAATTAAAAACAAAAATATCTTTTTACTAAGCTTTGCAGAGTGAGTGCCACGTAGTAGCACTCTCCTGAGTACACGAGGATCCCCCAGCCCCCAGGGCCCACTATACTACAATGAGCGTGAACGTCACGCGAACGCTTAGAGGGATCGTGACTACGACGCGCCTTCATTTTTAATAGGAAAGACCTGAATTCACGAAGTTTTGTAACGGAACGGAGAGTACGTGTACTCCACGAAGCGATAGATGGGTATGGCGTTTTCCAAAAAAAGAAAAAAAATAAATTAGATTAGCCAACGAGAAAGTCCCACGTGGAAGGGCAAAATCAGAATCAAAGAGGCCGTCATGATCAACGCAACGGTCGCATTGGAATCGGTGAAAGCCGGTTCTGGAGAACGAGATTGGGCGGAAAGCGGTTAATATTTCGAATTACGTTCCACTGTTGCTAAGAATACTCTTTAGAGGAGGGAGACGAGAGAGCGAGTTTCGCCAAGTTGCCTTCTACTTTCATCACAATCTTTATTATAATCTGTTTTAATTTTGTTCATTATCTATCTCTCTTGATTTTGTTTTCAGTGTTGATCTAAGTTTTGAAGCAAATTTTGTTTGGTTTTCGTTTGTGTATCAGGTGAATTTTCTGTTTATTCAGATTTGAGATCTTAGCGTCTCCTCTCTCTTTAAACTCTTCTCTCACTGGAGTAGAAGCAGAGAACTCGAGAATGGAATGGTGGAGCAAGATGTCTTCTCCCTTGCGAAGATTTACCTTCAGAGTCGCCGCTCGTCTCGGATTTCGCAAACGCGGTGAGTGATTTCTTTACCAAAATCTCTGTTAATATGTTGATTGATTCTTTCTGATTCAATTGCTGGAGAATATATACACTGTTCGGATTCTCAATTCCAAGCGTAGGGATATAGGAAGGACTGAATTAATACTGCTAGTGGAATTGGATTTCTCAGAACGGATTGGTTATTATTATTATTATTAGTATTTTTTTTTTTTTTTTGTTGATCTAAAACTTGAGAAATGGAATAGTGATCAGTGAATGATTGGGGATTTTGAAATGGATTAGGGCTAGTGAAACTTGGGCGAGATGTGAAGGCATGTGAATACGAGGACGTGCACGTGATGTGGGAGATGCTGAAGAGAAACGAAACGGATCCGGTAATTCGATTGTCGGAAAGACGCCGAAAAAGGAGATCGATGTGGAATATCTTTTGGTGGGCTCGATCGGCTCCATGCATTGGCGGAAGATTCTGAAGAATGAGTCACCACTCTTGGTTAAATCCAACACCATGAATTTGGGTCATAATGTAACCAGCCACCAGGTAATGAAGAGATTGAAAAAACAAAGGAAGCATCTATCCATATATCAGCTAAATTAAGATGTTACTTTGTTTGTTTAGAAAAACTAGCACTACTACATAGATAACCAAGTGATTACCTAGTCTAATCCAATCTTGATCATGACCCCCTCTCTTCTCTCCTCCCTTTCTTATCTTCATATTCTATCAAATAATTATAATACTAGATTTGGGTGTATGCCGCCTCTTATATATATAATTTTGCCTGCCATTTCTTCTTCCCCTCGACTTCTTCTCTACTTCTGATTCCTAATTTGAGTTGACTGTGACAATTGGTTTGGTTGACATTACTTATTGAATTGAAACTGAAAGGAATTGGGTTTTACATCAATAATGCACCAAACGACCCTGTTTTAGGTGATGCTAGTTACCGTCGTCTAAAAATAAAAATGCTGTGTAGCTTAATTCAAAGCTTCTTGTAATTGAAATATAAGAAGCACTAAATCCATTAAGGGGCCAGCATTATTATTATTAAGTATAAAAAAAATTGTTTATATTAATTATATATTTTCTGTTTCAATTACTAACAAAGTTGGTATGTTGCTTTAGCGGTTGGTACGAGACTTGCCTTAGGCAATTTTTTTTCTTTAATTTATATATATATATATATATATATAGAAACAAGTTGTGAAAAATTAATTCTATTTTAATTTTTGTCATATATAAACACACATACAAATATACCCCAATATTTTGGATCATTATAATTTTGTTTTACAAAAATTAATTGAATGATTTTTTTCTAGGTGAATAATTCTATAAAGATTTATAATAACTTTATAATTAGTATTATTTAATAAAAATATTATATATTAATGCATTTACAATAAATAAATAAAGTTTAGTCTCTAAATTTTAAAATTTTTTGTGACTAATAAATTCCTAAACTTTTAATTTTAACATTTTTAGATAGGTAAGAGTCATATTAGATGCATTGATAATTTATGAATCTATTAAACACAAAATTTAGAACTTATTATACATTTTTTAAAGTTCAAAAACTATATATATAAAATACAAAATTAAGAGTTTGTGGGCTAAATTTATAATATTATATATATTTGTGCTCACTGACTATACTATTGTCAGGTTGCTTCTTCTAATTGAGAGAGGACAGTGGTTTTTTTTTTCTTTTATTTTTTATTTTCATGAAACAAAGAGGAGTATCCAGAATTCAGATCACACGTTTGCAATATTTGTCTTCTCGTGATCGTCTATTCGCATCAGTCACATATTCGTTGACGACTGATTCAATAACCAATCAATTTTGCAAGAAAACTACACTTCGGTGCTTTAAAAATATATAATAATAATAAGCCACGTTAGTCTTTTTCCAGGGAAAAATATATTTCTGGTTCATGAATTTTTAAAATTGAATTAAAATGGGAGATGGGAAGGAGAGAAAAAATCTCCGTCCTTGTCCTCGCCTTGTTATCCTCTTTTACTTATTTAATATTATGTTATTATTAATGTATAGAAATTTATATCTAAATTTTAAGTTTTTATTATTTAATGGTTAAAATATTGAATATGTTTGAATTTAACCTTAAAATTTAATAATATAATTTGATTGGTAATTATTTTTTCATACTATAAATTTTTTTGATTAATTTCTCTTTAAATTAAAATTATACATGTAGAAGTAATCATATTAGCGAGAAATTTAACTATTCAACTAAAATTTATCTATATAAGTGATTTTATGTTAATTGATTTTTTAAAACAAAAACAAAAAAATTAAACAAGAATTTTTTTTTTATTTTTTTTATTTTTACGGAAAACAGGGAGCGGGGAAGCGATCTGCTCTAATAGTCAAATTAAGTAAATTCAAGAACATTTTTCATATATTACAAAAACGCTATTCATTCCAATATATTTATTTCATATTCCAGTAGTTGAGGCCGACTGCAATTTCTTTTTTTTAACAAAGTTTAATTTTACAAGTTAGAGTCTCTTAACTCTAAATAAATATCTAATGAGTATCTAAAATTTCAATTATATGTCCTATTAATTTCAACCCTTCAAAAGAAATTTCACATACCTCCTATCTGACAGAAATCTAAAAGTTAGTAATTGATGCACCGAGTTAAAATATTAGGTCAAGTCCATGGTCAAACAAAGGAAGTCCATCCCTAAAGATGAGAGAAACTCTCCCAGAACAATCTTCTATTTCAAAATGAATATTCAAAAACTGCCTATTACAACAACGAGGAAATAACATAATTAACCAATTAAATCTAATTAAACACTAATTAATCTGAATTAACAACTTAACAAATATTAAATCTAAATATACTATTTATCTTATAATTCTTTTCATCCCATTAGATATAATAATTAAATTTATATTTAATAGATTTGTTTTTTCAGTACCAAAAATGCAGATCAAACATGCTTTGTCGAATATTTATTTATTCATTTTTAGTACACTTTTGTGAATATAATAGATGGAGTAATTTTTAACATTTTTGAAAGTTGAGATGCTTATTAGTTATTACTATTAGGCATATTTATGGTTTAAAATCATTAAACAATTTTAAATTTGTAGGACAAAATAGACGTAAAGTTACTATTAAATTATGAATTTGAAAAAAAGTTAGAATTTAGTCCATATAATTTCAAAAATTAGAATTTGGTCCTTATAGTTTGGAGGAAAATAGAATTTAGTCCCTATAATTTGAAAAAAAAATTAGAATTTAGTTCCTACTTAGAGACTATTTATGATGATTTTATCAAATCATAAAGATTAAATTTTAGTTTTAAATCATAGAGATTAAACTCTAACTTTTTTAAATCATAAGGACTAAATTTACCCTTTAATCCAGAGTTACCATTTAAGGGGGTAATTTAACCCTTTTTAATTTTAATTTTCTCATCCGTACATACTAAAACATAAAATCAAAAGGGTAGCAAACGATGCAATTTTTTATTGGAGTAACAATGATTTTTCATTTCATTTTATTTTTGGAAACAAATGAATAAATTTTTTGACTTTGGTTATTAAACGGTGCGTTTCAAGAGGCGGTTGCTGTTGGTATCGGGGAGCTGCTCTATATAAATGTTGCAGCCGTTTAGGGTTTCAGGGTTCTGCAAATTTAACGAAGCGGCTGTCAGAGCTGAAAAGGGTTTCTAAGGTGATCGACCAACGAAGAAGACGATGGGTCATTCAAACGTGTGGAATTCACATCCAAAGAACTATGGACCTGGTTCTCGTACTTGGTATGCCTCCTCCTCCTATCTCAATTTTGCGTTCTCGCATTTTCATCCAAATATCCCCTTAGCAACATTGGATTTTGATTACCATCCATGTTCAACGCTGCTCTTTGAACTGTTCATATAATTTAGATCTTATTGGCCCTGATTTCAGGGGGATTCTCTTATTTGTTGTCGTATCTGGCATTCGATTGTGATTCTCTTTGACCATTTAGGTTGCATTGTTCTTATGAACATAAACTCAATCGGAAAATTAAGCTGATTCTTGAATTAGACTACACTGCTAGTTTGCACAAAACATTTATCTTCATCTTAATATTTGAGTGATTGTTGTTTCCCAGTCGAGTCTGCGGAAACCCCCATGGATTGATCCGCAAGTATGGCCTGATGTGCTGCAGGCAGTGCTTCCGTAGTAATGCCAAAGAAATTGGCTTCATTAAGGTAAATTAATTTTCTTCCCCACTACCCGCTTATAATATTTGCATTTTCCCTTGTTATTGGTTAAAATTTTCTGGTGCTGGTTGGTAATTGCCTATGAATAATTGATACACAAAACAGAATGTCAAATACCCTTCAACAATCAGTTCAATTAAGATTAGGATATATATTTCAATTCATTGGCTGCTTAAATTTATGATCATGCATTGTATTCTGTGTTGCAGTACCGCTGAGAATGGAGCTCTTGGTCTACAGATGTTGCAGACATGAGCATGCTGGTTTACTTGCTTTTTCTTGGTTTAGTCTATTTATAATTAAATGAATTAATTTCAAACAATTACGATCAAAAGAATTATGAGTTGCACTTTACAACCAATCAGGCTTGGGAATTATATGAATTTGGGTCATTGAAAGTTTAGGAGAATGCAGCTGTGGCTATATTCTTTTAATGCACTTTATGGCTGTTGTTATATTTATTCAATGTGAATATATGAAAATTTGCGTCTTATAATTGGTTTATTTAACATAAATTTGTTTTTGTTTTTTTTCCTTTTGAAATTCTCCTTATACATGAATATTTTGTCAAAGTTTGTTAAAAAAATTATTGAAATTTTGGAACATTTTTTGCTGACTCAAAACAAGTTCAGGAATTAGTAATATGAGAGAAGATGATATTGGTGGAGGTTTTCGTGGTTCATCAATTTTTTAGCTGCAATTTTGATGTTGTAAACTTGTTAGTCTGCAAACCTTTAATGTTAAGAGGTTTATAATAACAATTTACTTATTTTTAGGCCTAATAAATAGAATTTAATGTGTAAAATATAGTTATAAGTTCTATCAAAACTGAGTATTTTCTTCCCATAATGGTGTATTACGTATCACCAACATTATGGTGATTTGCAATTGTTGGATTAGTCTCCTCACACAATTAAGATTTTAGATTTCTGTCAACAGTAAGTTCAACATTTTCGCCTGTCAAAAACCATAATCAGCCACAACTATATTACCTTTAGGAAATAATAATTTATTGGTTAAAAAACTTTCATCAAAGTAACAATTTAGTGTCTGTGCTTTCAATTTTGTAACAATTTGGTCCTCAAACTTGAGTATATATCAATTTAGTTCTTCTACTTTCAAATTTGTAACAATTTAGTCTCCTAACATAAAACCAATTATCAAAATTAGATGTTAATTTTTTTATTTTATAATGTAGACCTTATTTTATAAAATGTCGAGTCCCTAATTAGTTTATTGATTCATTTATACAAGAAATCTCATTAAATCTTAATACAGTTTTCTACATTAAAGACTAAATTGTTACAAATTTTAAAGTATAAGAACTAAATTATTACATGGTAAAGTTTATGGACTAAATTGTTACAAAATTAAAAGTTTAGAATCTAAATTGTTACAAATCAAAGTTATTAAATTGTTACTTTTATGAAAGTTTATGGACTAGAAGTGATTTTTAACCTAATTTATTTTATGATATAGAACACCACAAAAGTTGGTCCTCAATAATAATTTGACAAGATTACGCTAATTAAAAAAGAATTAGTTAGAATGTGTCTCGTTTATTTAATTTTAGTATATATAGCTTCAATAATTGTTTTTTTTTTACAAAGTTCAATAAATTTAGTCCTATAGCTTGTTGTGGTTGCCTTTTTCAAAATTTTTTAATTTATTAACTAACATTTTCAAATTTCACTCCAAATTTACATAATATATTTTATTCAATAAAAATATTATTATTATTTAACCAAGACTAAATTTGATATTAAAATTGAACTAGATTTAAAATATAGAGTAAAATGATATTTTTAATTGAAAAGAGAGAGAGAAAAGCAATGGCCAATGGTTGTGTAATGTTGAACTCGAAAACAGCAGAAATAATTTTATGAGAAGTGAAATTGAAAAACATGAAATTCTCAAAAAACGAAGAGTCGCACGAAAGGAAACCAATAGAATAATAATAATAATACGGCTTTAATTAATTGGTTTCAATTTTCAAATTCCTAAATAAGAAAATAAAAACTAAAGAAAAATAAATTTTGGAGGTGCGGGGAATCGAACCCCGTGCCTCTCGCATGCAAAGCGAGCGCTCTACCATATGAGCTACACCCCCTTTGACGATAGAAACATTTACAACATTTTAAATATTTAATAATTAACAATAAACCATGGCAACCGGCTCGCATTCCGACTTCTTGTCGTTCATTTAAATTTGTTTGTTCCACACCGCAGTGTCATTTAACTCTACATTCTGTAACAAACCGATCGTCCATGCCACATAACATTATTATTTATTACAAAACAATTAAATCTTCTGCTTGCTTTATTTCATTTATTCACTTTCCGACAGAATTAAATGTCAAAACAAATCTCCATTGTTCTTCCGACATCCTCATCGACAACCAGTTTTGAAGGGCTTCCTCCCAAAAAGAGTGTTTTGAAGAAGAGGGTGTTTTCTTCTTTTCAAATTTTTGGGTATTATTCTGATTTGGAGTGATCTTCTTAGCACTGTGTTTGTGGGCATTTGGACGTTATGAAGTCTTTTAGGTTTCCGGTTATGCCTTTTCTGCTTCACACTTCTTTATTGCTGCTTTTCTTTACCAGCAATATCAATGCCTCTTTAACTTCCGGTAATTTTGGTTCTTTCTGTTCTGTTTCAACTCCAATCACATCCACTTCCTTATAAATGCTTGTTGGCCTTGTACTTTACTGTAAACTGTTTGGAACCCCCTGTTCTCTGCTCTGTTCTATCCGATGATGTTGTCATTTTCATTCACTTCAATCTGTCTGTATGTGAAAGATATTGGTTCAATATATTATTATCATTTTTTTTGGGTCCTGAATGAGGATCTCACTGATTAACATAGATAGACATTACAGCTACTGAGGGGGGAAAATAGTATTTGTTTTTTCATCTTCATGGATAAAAGTTTCCTGTAATGTTAAGAACAGATGAAATGATGTAATAAAACAGATGGGAAAATCTACAAACATCTAGGAGAATGCTTAAGTAGATGACAGCTTAAAGAGAAGAGACAGGAGAAGGGAGAAATTTGAAGTGTTTTAGCTATGAATCTGTTACACTGTAGAGTGTTCTTTGTGCTTTTTGTGATATCCAATGTAATTGGTTTCAGCTTAAATTATGTGGATAATTGCTGCTTTGAGCATATTAACCGTATTAAAGGGATAATATTGAGGCTAGGTCCGAGCACAAATTGGCAAAGTTTAGCTCAACGGTAATTGAGCTATTGTTGTACTAAAAATAGTCTCGGATAAATTGGACTCATCTTTGTTTGATTTTGATGTTTTTATGCTTGGTTTTTTCATATAACTGACAAAGTTTTCTACTTTACATTATTGTTCAGTCCTATTAGTTAAAGAGTTTCTTTGACTGTCTCCATTGCTGCTATGAACTATACTTTTGTTGTGGACTATGCAGCAATCTGTTTAAATGAGCCCTTCCAATTTAATTAACTGTCATCAAACATGAAGATAGATCCTCTCAATGACCTTCTTCTGTCTGTTTCACCTCTATATAATATTGATGTTTATCCTCTTCTCTTTTACTTTTTCCTTTGTATCATCTTTAGATGCAATCCTTCAACCAAAGAAGAAGTTAAGTAGTCATCAAACTAAGAATTTTCTGCAGGTTCAATTATATATTTAAGCAGAATTAGCCTTGTCTTTCACTGCCATTTTTAAGTTTTTCCTAACAGTTTAGAACTTTTTAGCTTTTTTTTTCCTCATGTATTGAACTTTGAAGTCGCATCATAAAGTATATAACTAGAAATCCGATCGATTTATACGTTTGAATTATCGGTTTAATTAAATAAGTGAGCACGAGTCGTATACGTTTTCATAATATGTTTCCCTGATATGCCTTCCTTAACTGTAATTGCAGCAATGGCTCCAAACCACCTCCATGGTGAATCAAATGAATGTTTGTTTGCCAAACCATCAAACAGGAAGCTGAAAGTATGAACTTGCTTTGTGAAGGCTTCAAATCCTAGCAACCTATATTTTACTTAGAGATGAAGAACATGGTTTCTTCCTAATTGACAGCTTCATTACTAATGAGATTGAAATCTGTTTTTGGTTCTCAGATGCAGGATTACGAGCATAGTAACCCGACGAGGAAGAATGTCCGTGTGGGTAACGTAAATCTTTACGACTACAGCCCCATTGATCCAGTTCCAAGCTCAAAGAGATCCATAAAACATGGACCAATAGAGCATGGCTCTCCTCTTATACCTCATATGCCAAATCCTTCCCCTCCTGATCAACCTCAGCCTGGTGGTTTTGTGTAGAGAGCAGATACCTTTCTCTCTACTACTTGCTATAAATAAACTGAAATTTGTTTATTATATATAAAACCAGCTATGTTAACTGTCATCGTCTCTACGTAAATACTTGCGACTCGTATTATCTACCGTACTAAAAAAGAAGTGCTGGAATGATGTATTAGGAAATGAATGTATTTGTAGTAGATCTTGTCTATTTATACCACATATAGTTTGGTTGAAGAGTTGTTTTACTTGTTTTATGAATCTATATGGGTTAGCCATTTTTGTTGGAAGCGATCTTTCTTCAATATTTCCTTCATTCATTCTAATTCATTTCATCCCATTGAAAATTTAGGGTGAAATTTGTTCAAAGTTCATGGACAAAATTTTGATTTTTTTTCCCTCCCCAACATTTAAGAATAATGGCATAGAGAGCCCTTTTATTGGGCCCAAATTAAAATTAACCTCAAATTTGAAAATAAATTAAATTTGGCCCTTTGTTTATATCGGCACTATGAGAAATTACCACTTTAACTCTAAATGCATTTCTTCCTTCTTCTTCATTATGCAGCTGCTCGATCTGGAGAAAAAAATCATGCACTTCTTTTTCTTCCTGCATTTCTCTTCTTCTCTTTTGCATTCTTCTTTTGATCTTCTTCATCTTCTTCCACTTCTTGTTGGTTATGAGTTGTCATCGTTTTCTTCTTCTTCTTTGTTTTGTAGTTTTTTTTTCTCTCCCTTTTTTGTTCTGTAGTCTGTTCACGAATAAAAAAATTGTAGTTGTCTGATGAGGAACTAGAGCGAGGAACGAGGAGCGAAGAGCGAGAATCTAAAAAAGGAAAAAAAATCGACGAAAAGATTGAAATTGTGTCTGATGAGGAACTAGAGCGAGAATCGAGTAGCTATAGCGAGAATCCAAAAAAAGGGAAAAATTGAAGAAAAGATTGAAGTTGTGTCTGATGAGAAACTAGAGTGAGAAGTGAATAGCTAGAGGGAGAATCGAGAAGCTAGAGCGAGAGTCACGCCCTTGCGCACATTTTGAGGTACTTTCACATGTGGCTAACATCAGCAGAAGACCATTTTTCATTTGTTTTTTAACCTTGGTCCATTTTTTATTTGGTTCCCTAAAAAGGGGCCACCCGTACAAAAATTCCATGAATGAAGTGGTGCACATAGTTTTGTAGTTTATTTATTTTTTAAAATTTACCAATTGTTTTAATATAAAGTATGGCAATCTTCAAAAAGTCATTGATATCCAGCATTACAAACACGACCATTGAAATAAGGCTTTAGAACTTGTAAATTTGAAGTTGGCATGGTATATCAAAATTTCATCCTGATTTTTTAATTTTATTAAATTAAACCTACTTAGAATCAAGTATTGCACAAACTTTCTAAAGTCACTTCCATAAAGTTAAGCTGATTTAATATATAATACACAAGTTTTTTAACATAAAATAACTGATTATTTTGTTTAGTTTCATCAATTATATAATTCATTAAACACATGAGAATATATATATATATATATAACAATTCATAAGTGAGTTTGCCACAATATATAATTCATTAAACACCAATATAAAAATTGGAATGCTGGCTAATTTTTTTTTGGTGGATGGAACCTAAAATCGTGAGGTTGATAATATGAATTTATAAATATGTAATATGAAAAGTTTAGTCCTAAAATGATATTAAAAGTTAATTGATATTGAATATCCTAGTACAAACTTTATTGTGTCGGACAAACTGTGATTGGTGAGAGAGTTTCAATAATAAACTAAGTTGGTTATCTTTTGAAAAATAATAATACTAAAAGAAAATTTTGCACAGAATTGTGCCCATCTTTCTGAGAAAATAAAGAGAAAAACGACAAAAAGAATATTGTTGTGGAGGTGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACACCCCCGTTTTTGTTTGTTTACCAATTTGTTCGATGTTAGTTTGTTATTTATCTGACGGCTCGCATTCCAAGTCTGCCATTTTAAATTTGTAAAATTTACACAAGTTTCTGCAAACGCAGAGCAAACATTTACTCCTCCACAGCCTGTACCCAATGCAGATGATATGATAAACAAGCATTGACGATCCCCTGATTTCTTTTATTGTTCCTTCTCTGATCCAATTAAATGCTATGCCATATTTCCACTGTTGTTTTAAAGCCCCCATGGACGAGCACCTTTGAAGCGCTTCTCCTCCCTAAGACTCCTTGGAAGTGGAAGAGGGTTTGTGTTTTTTTGTTTCTTTTTCTGGGTACATTCTCGTTTTGGAGTTGTTCGATTTTTTTCTGGGTCTGGTCCGCATTGTTTTTGGGGGGCATTTCGACATTATTTCATTATGAAGCTTTCTGGGTTTTGGGTTTTGTTTTTGGTCCTCCAAACAACTTTATTGCTGCTTTTCTTTCCCAGCTATGTAATTGCCTCCTCCAGCTCCGGTAATTTGGAAGTTAATGTTTGTTTTGATCACAATTTTTTACTTCTTTATTTGCTTATCCATTGCCATTCATATGTTCAATCTTACTGCATTTATATTAATGTCTTCTTATTTGTAATGTTACTTCGGTTCTTTGTTTTTATTATGCTAAATTATTTAAAACCCTTCATTCTCCAGGATCACTGAAGCTAATTCAGAACCATTTTGTTGTCTTTTTAATGTTTCTGTTCTGTAACACTATGTTCTTCTTGTCCTTTCCCTATCTTTAATAATGTTGGTATGCGCATACTAAAGAATGTCTGCAGGTTGTATCACATATTTAAGCAGAACTAGCGCATCTTCCATTTGGTTTACCCGTGGTTAAGCCATTTTCAAGTCCCCAATTTAAACATTTTCCTCCTCCTGTATTGAAATTCGAAGTTATAGCATCAAGTATATAGATAGAGATTGAGTTGTAACTTTATATGTTATTCTACTGTAGTTTTGCACGTTGATTTTGGTGTGCTTTTCTTGACTGCAATCGCAGATATGTCTCTGAACCACCACCATGTTAATCCAAACAAATGCTTGTCTGACATACCATTGAACAGGAAGCTGAAGGTACTTCCTTTTCAAAGGCTTTAAATCTAACAAGTCATTTTTACTTAGAGAAGTGCAGAGCATAGTTTCTTCCAAACTAATTGCTCCTTGATTAATGTGAGATTGGTTACAACTGTCTATAATGAATGGAATTGAATTCCTTTTTTGGTTCAGTTCCAGACTGATGAACATTATAGCCTGGGGAGAAAGAAGGTTCACCCAGGTGATCTAAATCTTGATGACTACCATCCCATTGATCCAGTTCCAAGTTCAAAGACATCAGTCAAACCCGGTCCAATAGAGCACGGCACTCCTCTCCTGCCTCATATGCCAAATCCTCCACCTCCTGATCAGCCAGGCGATTACCCTTAG

mRNA sequence

ATGGGCGGAGGCAATGGCCAGAAGGCTAAAATGGCTCGGGAGAGAAACCTGGAGAAACAAAAGTCATCCAGAGAAGCAGAGAACTCGAGAATGGAATGGTGGAGCAAGATGTCTTCTCCCTTGCGAAGATTTACCTTCAGAGTCGCCGCTCGTCTCGGATTTCGCAAACGCGGGCTAGTGAAACTTGGGCGAGATGTGAAGGCATGTGAATACGAGGACGTGCACGTGATGTGGGAGATGCTGAAGAGAAACGAAACGGATCCGAAGACGATGGGTCATTCAAACGTGTGGAATTCACATCCAAAGAACTATGGACCTGGTTCTCGTACTTGTCGAGTCTGCGGAAACCCCCATGGATTGATCCGCAAGTATGGCCTGATGTGCTGCAGGCAGTGCTTCCGTAGTAATGCCAAAGAAATTGGCTTCATTAAGATGCAGGATTACGAGCATAGTAACCCGACGAGGAAGAATGTCCGTGTGGGTAACGTAAATCTTTACGACTACAGCCCCATTGATCCAGTTCCAAGCTCAAAGAGATCCATAAAACATGGACCAATAGAGCATGGCTCTCCTCTTATACCTCATATGCCAAATCCTTCCCCTCCTGATCAACCTCAGCCTGTTTTGCACGTTGATTTTGGTGTGCTTTTCTTGACTGCAATCGCAGATATGTCTCTGAACCACCACCATGTTAATCCAAACAAATGCTTGTCTGACATACCATTGAACAGGAAGCTGAAGTTCCAGACTGATGAACATTATAGCCTGGGGAGAAAGAAGGTTCACCCAGGTGATCTAAATCTTGATGACTACCATCCCATTGATCCAGTTCCAAGTTCAAAGACATCAGTCAAACCCGGTCCAATAGAGCACGGCACTCCTCTCCTGCCTCATATGCCAAATCCTCCACCTCCTGATCAGCCAGGCGATTACCCTTAG

Coding sequence (CDS)

ATGGGCGGAGGCAATGGCCAGAAGGCTAAAATGGCTCGGGAGAGAAACCTGGAGAAACAAAAGTCATCCAGAGAAGCAGAGAACTCGAGAATGGAATGGTGGAGCAAGATGTCTTCTCCCTTGCGAAGATTTACCTTCAGAGTCGCCGCTCGTCTCGGATTTCGCAAACGCGGGCTAGTGAAACTTGGGCGAGATGTGAAGGCATGTGAATACGAGGACGTGCACGTGATGTGGGAGATGCTGAAGAGAAACGAAACGGATCCGAAGACGATGGGTCATTCAAACGTGTGGAATTCACATCCAAAGAACTATGGACCTGGTTCTCGTACTTGTCGAGTCTGCGGAAACCCCCATGGATTGATCCGCAAGTATGGCCTGATGTGCTGCAGGCAGTGCTTCCGTAGTAATGCCAAAGAAATTGGCTTCATTAAGATGCAGGATTACGAGCATAGTAACCCGACGAGGAAGAATGTCCGTGTGGGTAACGTAAATCTTTACGACTACAGCCCCATTGATCCAGTTCCAAGCTCAAAGAGATCCATAAAACATGGACCAATAGAGCATGGCTCTCCTCTTATACCTCATATGCCAAATCCTTCCCCTCCTGATCAACCTCAGCCTGTTTTGCACGTTGATTTTGGTGTGCTTTTCTTGACTGCAATCGCAGATATGTCTCTGAACCACCACCATGTTAATCCAAACAAATGCTTGTCTGACATACCATTGAACAGGAAGCTGAAGTTCCAGACTGATGAACATTATAGCCTGGGGAGAAAGAAGGTTCACCCAGGTGATCTAAATCTTGATGACTACCATCCCATTGATCCAGTTCCAAGTTCAAAGACATCAGTCAAACCCGGTCCAATAGAGCACGGCACTCCTCTCCTGCCTCATATGCCAAATCCTCCACCTCCTGATCAGCCAGGCGATTACCCTTAG

Protein sequence

MGGGNGQKAKMARERNLEKQKSSREAENSRMEWWSKMSSPLRRFTFRVAARLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDPKTMGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHMPNPSPPDQPQPVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPIDPVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDYP

Homology

[Close]

BLAST of HG10014187 vs. NCBI nr
Match: KAE8649878.1 (hypothetical protein Csa_012522 [Cucumis sativus])

HSP 1 Score: 353.6 bits (906), Expect = 1.7e-93
Identity = 170/204 (83.33%), Postives = 177/204 (86.76%), Query Frame = 0


Query: 108 SRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKMQDYEHSNPTRKNVRVGNVNLYD 167
           S+T RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK+QD E SNPTRKNVRVG+VNLYD
Sbjct: 78  SQTRRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKLQDREQSNPTRKNVRVGDVNLYD 137

Query: 168 YSPIDPVPSSKRSIKHGPIEHGSPLIPHMPNPSPPDQPQPVLHVDFGVLFLTAIADMSLN 227
           Y PIDPVPSSKRSIKHGPIEHGSPLIPHMP+PSPPDQPQP               D++LN
Sbjct: 138 YHPIDPVPSSKRSIKHGPIEHGSPLIPHMPSPSPPDQPQP---------------DIALN 197

Query: 228 HHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPIDPVPSSKTSVKPG 287
           HHHVN NKCLSDI LNRKLKFQTDEH + GRKKVHP DLNLDDYHPIDPVPSSKTSVKPG
Sbjct: 198 HHHVNANKCLSDILLNRKLKFQTDEHCNHGRKKVHPDDLNLDDYHPIDPVPSSKTSVKPG 257

Query: 288 PIEHGTPLLPHMPNPPPPDQPGDY 312
           PIEHG PLLPHMPNPPPP QPG Y
Sbjct: 258 PIEHGAPLLPHMPNPPPPSQPGGY 266

[Close]

BLAST of HG10014187 vs. NCBI nr
Match: KAG6591414.1 (hypothetical protein SDJN03_13760, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 219.9 bits (559), Expect = 3.0e-53
Identity = 130/287 (45.30%), Postives = 153/287 (53.31%), Query Frame = 0


Query: 25  EAENSRMEWWSKMSSPLRRFTFRVAARLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRN 84
           EAE + M WWS+M+SPLRRF+FR+A+RLGFRKRGL+KLGRDV+ACEY DV VMWEM+KRN
Sbjct: 17  EAEQTTMGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRN 76

Query: 85  ETDPKTMGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 144
           E                                                    KE+  + 
Sbjct: 77  E----------------------------------------------------KEV--VG 136

Query: 145 MQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHMPNPSPPDQ 204
           +Q+       R+  R   +N+  +                                    
Sbjct: 137 VQE-------RRRKRRSLLNILWWGG---------------------------------- 191

Query: 205 PQPVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPG 264
                            +DM+L+HHHVNPN+CLSDIP NRKLKFQTD+H SLG+KKVHPG
Sbjct: 197 -----------------SDMALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPG 191

Query: 265 DLNLDDYHPIDPVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY 312
           DL LDDY  IDPVPSSKTSVKPGPIEHG PLLPHMP PPPPDQPGDY
Sbjct: 257 DLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDY 191

[Close]

BLAST of HG10014187 vs. NCBI nr
Match: KAF5740625.1 (hypothetical protein HS088_TW11G00702 [Tripterygium wilfordii])

HSP 1 Score: 182.2 bits (461), Expect = 7.0e-42
Identity = 82/136 (60.29%), Postives = 97/136 (71.32%), Query Frame = 0


Query: 31  MEWWSKMSSPLRRFTFRVAARLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNET---- 90
           M+WW KM+ P+RR    V   L  R++GL+KL  DV+ACEYED+ +MWEML+++ET    
Sbjct: 1   MDWWDKMTLPMRRLWINVVTHLRIREKGLLKLRHDVRACEYEDIQIMWEMLQKHETELSQ 60

Query: 91  ------------------DPKTMGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMC 145
                             +  TMGHSNVWNSHPK+YGPGSR CRVCGNPHG+IRKYGLMC
Sbjct: 61  SFGRKKKRSIWDFFGWASEKSTMGHSNVWNSHPKSYGPGSRACRVCGNPHGIIRKYGLMC 120

[Close]

BLAST of HG10014187 vs. NCBI nr
Match: XP_038899330.1 (uncharacterized protein LOC120086661 [Benincasa hispida] >XP_038899331.1 uncharacterized protein LOC120086661 [Benincasa hispida] >XP_038899332.1 uncharacterized protein LOC120086661 [Benincasa hispida])

HSP 1 Score: 181.8 bits (460), Expect = 9.1e-42
Identity = 83/90 (92.22%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 222 ADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPIDPVPSSK 281
           +D++LN+HHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPIDPVPSSK
Sbjct: 32  SDVALNNHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPIDPVPSSK 91

Query: 282 TSVKPGPIEHGTPLLPHMPNPPPPDQPGDY 312
           TSVKPGPIEHG PLLPHMPN PPP QPGDY
Sbjct: 92  TSVKPGPIEHGAPLLPHMPNSPPPHQPGDY 121

[Close]

BLAST of HG10014187 vs. NCBI nr
Match: KAB1204029.1 (40S ribosomal protein S29 [Morella rubra] >KAB1223198.1 40S ribosomal protein S29 [Morella rubra])

HSP 1 Score: 172.9 bits (437), Expect = 4.2e-39
Identity = 113/297 (38.05%), Postives = 150/297 (50.51%), Query Frame = 0


Query: 91  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK------ 150
           MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK      
Sbjct: 1   MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKFCCSLF 60

Query: 151 ------------------MQDYEHSNPTRKNVRVGNVN-------LYDYSPIDPVPSSKR 210
                             ++++  ++P  + +++   N       L          + + 
Sbjct: 61  ASIRYLIWLIANFTTVKAVKEFITTHPNVRRLKLNEENEENSQYGLLARGRKQTTENRRT 120

Query: 211 SIKHGPIEHGSPLIPHMPNPSPPDQPQPVL-----------------------HV----- 270
           ++ + P    S L+P  P   P     P L                       H+     
Sbjct: 121 NVVNLP--GASSLLPGTPKTCPTACIPPRLCAIKVATFPTVSAALCRGNNYPEHLFTAIK 180

Query: 271 ------DFGVLFLTAIADMSLNHHHVNPNKCLSDI-----------PLNRKLKFQTDEHY 311
                   G+L+ +  A +  NH  ++   C + +             NR+LK   +  Y
Sbjct: 181 DNDIDNPHGLLYFSLAALIESNHILLHNLHCKASVFTHNGDGMTRATTNRRLK---ENGY 240

[Close]

BLAST of HG10014187 vs. ExPASy Swiss-Prot
Match: Q680P8 (40S ribosomal protein S29 OS=Arabidopsis thaliana OX=3702 GN=RPS29A PE=3 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 6.1e-25
Identity = 50/54 (92.59%), Postives = 50/54 (92.59%), Query Frame = 0


Query: 91  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 145
           MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK
Sbjct: 1   MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIK 54

[Close]

BLAST of HG10014187 vs. ExPASy Swiss-Prot
Match: Q5I7K3 (40S ribosomal protein S29 OS=Triticum aestivum OX=4565 GN=RPS29 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.0e-24
Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 0


Query: 91  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 145
           MGHSNVWNSHPKNYG GSR CRVCGN HGLIRKYGLMCCRQCFRS+AK+IGFIK
Sbjct: 1   MGHSNVWNSHPKNYGAGSRVCRVCGNSHGLIRKYGLMCCRQCFRSDAKDIGFIK 54

[Close]

BLAST of HG10014187 vs. ExPASy Swiss-Prot
Match: Q7XYB0 (40S ribosomal protein S29 OS=Griffithsia japonica OX=83288 GN=RPS29 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.3e-18
Identity = 37/54 (68.52%), Postives = 44/54 (81.48%), Query Frame = 0


Query: 91  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 145
           MGH N+W SHP+ YG GSR+C++CGN HGLIRKY +  CRQCFR  AK+IGFIK
Sbjct: 1   MGHQNIWYSHPRKYGKGSRSCKICGNKHGLIRKYSMNICRQCFREYAKDIGFIK 54

[Close]

BLAST of HG10014187 vs. ExPASy Swiss-Prot
Match: Q4PM47 (40S ribosomal protein S29 OS=Ixodes scapularis OX=6945 GN=RpS29 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.6e-17
Identity = 38/55 (69.09%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 91  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKM 146
           MGH N+W SHP+ YGPGSR CRVC N HGLIRKYGL  CR+CFR  A +IGF K+
Sbjct: 1   MGHENIWYSHPRKYGPGSRYCRVCANHHGLIRKYGLNICRRCFRQYAADIGFKKL 55

[Close]

BLAST of HG10014187 vs. ExPASy Swiss-Prot
Match: Q6F473 (40S ribosomal protein S29 OS=Plutella xylostella OX=51655 GN=RpS29 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.6e-17
Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 91  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKM 146
           MGH+N+W SHP+ YG GSR+CR C N HGLIRKYGL  CRQCFR  A +IGF K+
Sbjct: 1   MGHANIWYSHPRKYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYANDIGFKKL 55

[Close]

BLAST of HG10014187 vs. ExPASy TrEMBL
Match: A0A7J7D2Q4 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW11G00702 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.4e-42
Identity = 82/136 (60.29%), Postives = 97/136 (71.32%), Query Frame = 0


Query: 31  MEWWSKMSSPLRRFTFRVAARLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNET---- 90
           M+WW KM+ P+RR    V   L  R++GL+KL  DV+ACEYED+ +MWEML+++ET    
Sbjct: 1   MDWWDKMTLPMRRLWINVVTHLRIREKGLLKLRHDVRACEYEDIQIMWEMLQKHETELSQ 60

Query: 91  ------------------DPKTMGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMC 145
                             +  TMGHSNVWNSHPK+YGPGSR CRVCGNPHG+IRKYGLMC
Sbjct: 61  SFGRKKKRSIWDFFGWASEKSTMGHSNVWNSHPKSYGPGSRACRVCGNPHGIIRKYGLMC 120

[Close]

BLAST of HG10014187 vs. ExPASy TrEMBL
Match: A0A6A1UUD7 (40S ribosomal protein S29 OS=Morella rubra OX=262757 GN=CJ030_MR2G011935 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.0e-39
Identity = 113/297 (38.05%), Postives = 150/297 (50.51%), Query Frame = 0


Query: 91  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK------ 150
           MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK      
Sbjct: 1   MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKFCCSLF 60

Query: 151 ------------------MQDYEHSNPTRKNVRVGNVN-------LYDYSPIDPVPSSKR 210
                             ++++  ++P  + +++   N       L          + + 
Sbjct: 61  ASIRYLIWLIANFTTVKAVKEFITTHPNVRRLKLNEENEENSQYGLLARGRKQTTENRRT 120

Query: 211 SIKHGPIEHGSPLIPHMPNPSPPDQPQPVL-----------------------HV----- 270
           ++ + P    S L+P  P   P     P L                       H+     
Sbjct: 121 NVVNLP--GASSLLPGTPKTCPTACIPPRLCAIKVATFPTVSAALCRGNNYPEHLFTAIK 180

Query: 271 ------DFGVLFLTAIADMSLNHHHVNPNKCLSDI-----------PLNRKLKFQTDEHY 311
                   G+L+ +  A +  NH  ++   C + +             NR+LK   +  Y
Sbjct: 181 DNDIDNPHGLLYFSLAALIESNHILLHNLHCKASVFTHNGDGMTRATTNRRLK---ENGY 240

[Close]

BLAST of HG10014187 vs. ExPASy TrEMBL
Match: A0A1S3BV38 (uncharacterized protein LOC103493595 OS=Cucumis melo OX=3656 GN=LOC103493595 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 7.8e-39
Identity = 78/98 (79.59%), Postives = 87/98 (88.78%), Query Frame = 0


Query: 214 GVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHP 273
           G +  ++ +D++LN HHVN  KCLSD+PLNRKLKFQTDEH +LGRKKVHPGDLNLDDYHP
Sbjct: 24  GYINASSSSDIALNQHHVNAKKCLSDMPLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHP 83

Query: 274 IDPVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY 312
           IDPVPSSKTSVKPGPIEH  PLLPHMPNPPPP+QPG Y
Sbjct: 84  IDPVPSSKTSVKPGPIEHSAPLLPHMPNPPPPNQPGGY 121

[Close]

BLAST of HG10014187 vs. ExPASy TrEMBL
Match: A0A5A7VB21 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002820 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-38
Identity = 78/90 (86.67%), Postives = 83/90 (92.22%), Query Frame = 0


Query: 222 ADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPIDPVPSSK 281
           AD++LN HHVN  KCLSD+PLNRKLKFQTDEH +LGRKKVHPGDLNLDDYHPIDPVPSSK
Sbjct: 3   ADIALNQHHVNAKKCLSDMPLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSK 62

Query: 282 TSVKPGPIEHGTPLLPHMPNPPPPDQPGDY 312
           TSVKPGPIEH  PLLPHMPNPPPP+QPG Y
Sbjct: 63  TSVKPGPIEHSAPLLPHMPNPPPPNQPGGY 92

[Close]

BLAST of HG10014187 vs. ExPASy TrEMBL
Match: A0A067KZM9 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16044 PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.7e-38
Identity = 101/219 (46.12%), Postives = 121/219 (55.25%), Query Frame = 0


Query: 91  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKMQDYEH 150
           MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK+     
Sbjct: 1   MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKV----- 60

Query: 151 SNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHMPNPSPPDQPQPVLH 210
           S      + VG                                              ++ 
Sbjct: 61  SGIWVSYLLVGTA--------------------------------------------LIF 120

Query: 211 VDFG-VLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLD 270
           ++F  V    +I+DM++           S + ++RKLK  +  H +   +  H   L+LD
Sbjct: 121 LNFSCVTTAISISDMAMTDGS-------SRMIMSRKLKENSYNHSTDKNRDAH--SLDLD 161

Query: 271 DYHPIDPVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQP 309
           DYHPIDPVPSSK S+KPGPIEHGTPL P++P   PP  P
Sbjct: 181 DYHPIDPVPSSKASIKPGPIEHGTPLNPYIPRHSPPSPP 161

[Close]

BLAST of HG10014187 vs. TAIR 10
Match: AT3G43980.1 (Ribosomal protein S14p/S29e family protein )

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-26
Identity = 50/54 (92.59%), Postives = 50/54 (92.59%), Query Frame = 0


Query: 91  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 145
           MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK
Sbjct: 1   MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIK 54

[Close]

BLAST of HG10014187 vs. TAIR 10
Match: AT3G44010.1 (Ribosomal protein S14p/S29e family protein )

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-26
Identity = 50/54 (92.59%), Postives = 50/54 (92.59%), Query Frame = 0


Query: 91  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 145
           MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK
Sbjct: 1   MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIK 54

[Close]

BLAST of HG10014187 vs. TAIR 10
Match: AT4G33865.1 (Ribosomal protein S14p/S29e family protein )

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-26
Identity = 50/54 (92.59%), Postives = 50/54 (92.59%), Query Frame = 0


Query: 91  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 145
           MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK
Sbjct: 1   MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIK 54

[Close]

BLAST of HG10014187 vs. TAIR 10
Match: AT5G43150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 70.5 bits (171), Expect = 2.7e-12
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 32 EWWSKMSSPLRRFTFRVAARLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNE 86
          EWW+ M+ P RR   R   R+GFR  GL++L  DV +CEYED+H+MW +L +NE
Sbjct: 8  EWWNTMAFPTRRIWNRFTVRVGFRHSGLLRLEHDVSSCEYEDIHIMWNLLHKNE 61

[Close]

BLAST of HG10014187 vs. TAIR 10
Match: AT5G01075.1 (Glycosyl hydrolase family 35 protein )

HSP 1 Score: 56.2 bits (134), Expect = 5.4e-08
Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 0


Query: 266 LNLDDYH-PIDPVPSSKTSVKPGPIEHGTPLLPHMPNPPPP 306
           + L+DY+ P+DP P++K S+KPGPIEHGTPL P++P PP P
Sbjct: 28  VGLEDYNFPVDPTPTTKASIKPGPIEHGTPLNPYIPKPPSP 68

The following BLAST results are available for this feature:

BLAST of HG10014187 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649878.1	1.7e-93	83.33	hypothetical protein Csa_012522 [Cucumis sativus]	[more]
KAG6591414.1	3.0e-53	45.30	hypothetical protein SDJN03_13760, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAF5740625.1	7.0e-42	60.29	hypothetical protein HS088_TW11G00702 [Tripterygium wilfordii]	[more]
XP_038899330.1	9.1e-42	92.22	uncharacterized protein LOC120086661 [Benincasa hispida] >XP_038899331.1 unchara...	[more]
KAB1204029.1	4.2e-39	38.05	40S ribosomal protein S29 [Morella rubra] >KAB1223198.1 40S ribosomal protein S2...	[more]

BLAST of HG10014187 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q680P8	6.1e-25	92.59	40S ribosomal protein S29 OS=Arabidopsis thaliana OX=3702 GN=RPS29A PE=3 SV=2	[more]
Q5I7K3	1.0e-24	90.74	40S ribosomal protein S29 OS=Triticum aestivum OX=4565 GN=RPS29 PE=1 SV=1	[more]
Q7XYB0	4.3e-18	68.52	40S ribosomal protein S29 OS=Griffithsia japonica OX=83288 GN=RPS29 PE=3 SV=1	[more]
Q4PM47	1.6e-17	69.09	40S ribosomal protein S29 OS=Ixodes scapularis OX=6945 GN=RpS29 PE=3 SV=1	[more]
Q6F473	3.6e-17	67.27	40S ribosomal protein S29 OS=Plutella xylostella OX=51655 GN=RpS29 PE=3 SV=1	[more]

BLAST of HG10014187 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J7D2Q4	3.4e-42	60.29	Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW11G00702 ...	[more]
A0A6A1UUD7	2.0e-39	38.05	40S ribosomal protein S29 OS=Morella rubra OX=262757 GN=CJ030_MR2G011935 PE=3 SV...	[more]
A0A1S3BV38	7.8e-39	79.59	uncharacterized protein LOC103493595 OS=Cucumis melo OX=3656 GN=LOC103493595 PE=...	[more]
A0A5A7VB21	1.3e-38	86.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A067KZM9	1.7e-38	46.12	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16044 PE=3 SV=1	[more]

BLAST of HG10014187 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G43980.1	4.4e-26	92.59	Ribosomal protein S14p/S29e family protein	[more]
AT3G44010.1	4.4e-26	92.59	Ribosomal protein S14p/S29e family protein	[more]
AT4G33865.1	4.4e-26	92.59	Ribosomal protein S14p/S29e family protein	[more]
AT5G43150.1	2.7e-12	51.85	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G01075.1	5.4e-08	60.98	Glycosyl hydrolase family 35 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043140	Ribosomal protein S14/S29	GENE3D	4.10.830.10	30s Ribosomal Protein S14; Chain N	coord: 91..146 e-value: 1.1E-33 score: 116.9
IPR001209	Ribosomal protein S14	PFAM	PF00253	Ribosomal_S14	coord: 97..144 e-value: 6.1E-16 score: 57.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..31
None	No IPR available	PANTHER	PTHR37249	OS03G0206201 PROTEIN	coord: 209..310 coord: 143..207
None	No IPR available	PANTHER	PTHR37249:SF3	BNAANNG14020D PROTEIN	coord: 209..310 coord: 143..207
None	No IPR available	SUPERFAMILY	118359	Expressed protein At2g23090/F21P24.15	coord: 1..23
IPR023676	Ribosomal protein S14, type Z, archaeal	HAMAP	MF_01364_A	Ribosomal_S14_2_A	coord: 84..147 score: 16.315882

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10014187.1	HG10014187.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome