HG10014161 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACGCAACGGCAAACCAGACAGCTGCTTGAGGTCACAGGCACGTTACTTTAGGCTAGGTTCTAATGGAGGGACGAATTATTTATCACTTATCAGGCCTTCTTAATCTTCATTATCCTTCGCTTGATTTAATTTCTTTTTCCCTTTTCTCATTGTTTCTACAGTTGATCGATGCTACAACTTGGAGGACACAGAGCCAGTTGAGACCGAATACTCATGCGTCCTTATATATGGTGGTTCCATGAGGAGGACCCGACCATGCGCTGGTACGTATGTGCTTTTAATTTTGTTGTTTCAACTTTCAAGCGTTTAGATTGGGACTTGGGAATTGGAATTCAAATGAAATCACACTGTGAATTGATTGGTTCATTAGGTAGAGGCACACACCCAGTGTTCGAGGAGAGATTCGTTTTCGAATTCACTGAAAGAGTTGTAGAATTTAACATTTGGGTATTAGCCAATAAGCCCACAAGAAACGATCAAGTTATTGGCTCCCTAAGGTAAGAACTCGACCTTTTTGTGTATTAAACGATAACAGAATTTAATTTCCTGGATTTAGAGTTCAGCTCCAACTACTACTTTCCAATGGTTATGTTGATTCCACCTGGACTCTCCTAAAGACAGATGGCAGGTACAAAACAACACTAAACTAAAATCACTTGATTTTGATTTAAATTATATATATATATATATATATTTTATTTCTCTGAAAGTTTAAGTTTGCTTTCATCGCAGGCCTGCGGGGTATATACGGCTCACATTGCAATTTCCCTCTTCCAGTTTTAGAGTAATCTCCATTTCTTATACATCTCTTTATTGACCAATGACAAGCACAACAGTACTTATTTCCTTTTTGTCTTGATTTGGCGTAGTTGCAGTGCCAAGACTCATATTACACAGCTCCTCTGGAAGTAGATGCAACCCAACGGCCGATTTTGCACCAACTCCTACCGTATGATGCCCTTCCACCGCCGAGGCCAACGCAGCCAAATGGCACAGGACTCGCCGCTCTTTGGTCCCAATTCCTGCCGTATGGCTCACCACCACCGGCTGCCTCTGCTTCTGCCTTCACTGCTCCCCCTGCAGGCTACCCTCTGCCAGAGTACCCAATTTATCCTCCCCCTCCACCAGGTACATTTTTCTTATCATGCATGGGTCAAATTATTCAAACCACAACTTAAATGGCTGATCAAACTTCCATGAGTTTCAGGTTCAGGCCTCTCTGATATTTACCCGCCTCCACCACGCTGACGGCTCACCTCACCTAACCATGTTGTGTAGATCAAATTTGAGAAATTTTATACTCTGTTATCGATTTATAAGTTATTTTTTAATGTTATTAGATCTCCATATCATCACTTTTAATTAGTGCTAATGTGGGTGCGATCAAGGGTAGTGTATGCGTTACTTGAAATTTTCATATGAAATTTAAATGCGGTGGAATATCGAGTGATGTAAAACTTGAAGGTGATGGTTTTCAGTTGTTGTATTTATGAGTTTGAGAAGAATGTCTTTGACGACTGGCATTAATTAATAAGTTTGATCGTGTCATTACCAAGTAATTAATTAGTTTTTAAGCTGTCCCATTGTCCCCAGTCTTATAAAGTGATTCATACGAAGGAGGATTAATTGAAACTTGAAAGCAAATTAAAAGCAAAGAAACACCTGTTATCTATTTTCTATCTTCAACTTCTCTTCCTTGCCCCCATGGGCCAAAGATTTACTGAAAATGGGAGAACATATTCCAGCCGGAGCAAAACAAATCGAACCTAGTCTGATCAATGGACCTATACTGGGCCTTAACGATAATGGACCTGTATTGGGCCTTAGCAACTGGTTAGAAAATCAAAGATACCCAGTAGACTGCATCTCGAAGGCACTTTTTACTGTCCCCAAACAAAGGACCTCATAG ATGGAACGCAACGGCAAACCAGACAGCTGCTTGAGGTCACAGGCACGTTACTTTAGGCTAGTTGATCGATGCTACAACTTGGAGGACACAGAGCCAGTTGAGACCGAATACTCATGCGTCCTTATATATGGTGGTTCCATGAGGAGGACCCGACCATGCGCTGGTAGAGGCACACACCCAGTGTTCGAGGAGAGATTCGTTTTCGAATTCACTGAAAGAGTTGTAGAATTTAACATTTGGGTATTAGCCAATAAGCCCACAAGAAACGATCAAGTTATTGGCTCCCTAAGGCCTGCGGGGTATATACGGCTCACATTGCAATTTCCCTCTTCCAGTTTTAGATTGCAGTGCCAAGACTCATATTACACAGCTCCTCTGGAAGTAGATGCAACCCAACGGCCGATTTTGCACCAACTCCTACCGTATGATGCCCTTCCACCGCCGAGGCCAACGCAGCCAAATGGCACAGGACTCGCCGCTCTTTGGTCCCAATTCCTGCCGTATGGCTCACCACCACCGGCTGCCTCTGCTTCTGCCTTCACTGCTCCCCCTGCAGGCTACCCTCTGCCAGAGTACCCAATTTATCCTCCCCCTCCACCAGATTTACTGAAAATGGGAGAACATATTCCAGCCGGAGCAAAACAAATCGAACCTAGTCTGATCAATGGACCTATACTGGGCCTTAACGATAATGGACCTGTATTGGGCCTTAGCAACTGGTTAGAAAATCAAAGATACCCAGTAGACTGCATCTCGAAGGCACTTTTTACTGTCCCCAAACAAAGGACCTCATAG ATGGAACGCAACGGCAAACCAGACAGCTGCTTGAGGTCACAGGCACGTTACTTTAGGCTAGTTGATCGATGCTACAACTTGGAGGACACAGAGCCAGTTGAGACCGAATACTCATGCGTCCTTATATATGGTGGTTCCATGAGGAGGACCCGACCATGCGCTGGTAGAGGCACACACCCAGTGTTCGAGGAGAGATTCGTTTTCGAATTCACTGAAAGAGTTGTAGAATTTAACATTTGGGTATTAGCCAATAAGCCCACAAGAAACGATCAAGTTATTGGCTCCCTAAGGCCTGCGGGGTATATACGGCTCACATTGCAATTTCCCTCTTCCAGTTTTAGATTGCAGTGCCAAGACTCATATTACACAGCTCCTCTGGAAGTAGATGCAACCCAACGGCCGATTTTGCACCAACTCCTACCGTATGATGCCCTTCCACCGCCGAGGCCAACGCAGCCAAATGGCACAGGACTCGCCGCTCTTTGGTCCCAATTCCTGCCGTATGGCTCACCACCACCGGCTGCCTCTGCTTCTGCCTTCACTGCTCCCCCTGCAGGCTACCCTCTGCCAGAGTACCCAATTTATCCTCCCCCTCCACCAGATTTACTGAAAATGGGAGAACATATTCCAGCCGGAGCAAAACAAATCGAACCTAGTCTGATCAATGGACCTATACTGGGCCTTAACGATAATGGACCTGTATTGGGCCTTAGCAACTGGTTAGAAAATCAAAGATACCCAGTAGACTGCATCTCGAAGGCACTTTTTACTGTCCCCAAACAAAGGACCTCATAG MERNGKPDSCLRSQARYFRLVDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPCAGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRPAGYIRLTLQFPSSSFRLQCQDSYYTAPLEVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWSQFLPYGSPPPAASASAFTAPPAGYPLPEYPIYPPPPPDLLKMGEHIPAGAKQIEPSLINGPILGLNDNGPVLGLSNWLENQRYPVDCISKALFTVPKQRTS Homology
BLAST of HG10014161 vs. NCBI nr
Match: TYK20174.1 (formin-like protein 20 [Cucumis melo var. makuwa]) HSP 1 Score: 283.1 bits (723), Expect = 2.5e-72 Identity = 152/239 (63.60%), Postives = 167/239 (69.87%), Query Frame = 0
BLAST of HG10014161 vs. NCBI nr
Match: XP_038897491.1 (leucine-rich repeat extensin-like protein 6 isoform X2 [Benincasa hispida]) HSP 1 Score: 271.9 bits (694), Expect = 5.7e-69 Identity = 147/229 (64.19%), Postives = 157/229 (68.56%), Query Frame = 0
BLAST of HG10014161 vs. NCBI nr
Match: XP_008452599.1 (PREDICTED: formin-like protein 20 [Cucumis melo]) HSP 1 Score: 269.2 bits (687), Expect = 3.7e-68 Identity = 143/222 (64.41%), Postives = 157/222 (70.72%), Query Frame = 0
BLAST of HG10014161 vs. NCBI nr
Match: XP_011654133.2 (actin cytoskeleton-regulatory complex protein PAN1 isoform X2 [Cucumis sativus] >KAE8649868.1 hypothetical protein Csa_012904 [Cucumis sativus]) HSP 1 Score: 261.9 bits (668), Expect = 5.8e-66 Identity = 138/216 (63.89%), Postives = 154/216 (71.30%), Query Frame = 0
BLAST of HG10014161 vs. NCBI nr
Match: XP_038897490.1 (formin-like protein 7 isoform X1 [Benincasa hispida]) HSP 1 Score: 254.6 bits (649), Expect = 9.3e-64 Identity = 147/264 (55.68%), Postives = 157/264 (59.47%), Query Frame = 0
BLAST of HG10014161 vs. ExPASy TrEMBL
Match: A0A5D3D9I0 (Formin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003060 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 1.2e-72 Identity = 152/239 (63.60%), Postives = 167/239 (69.87%), Query Frame = 0
BLAST of HG10014161 vs. ExPASy TrEMBL
Match: A0A1S3BVD9 (formin-like protein 20 OS=Cucumis melo OX=3656 GN=LOC103493572 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 1.8e-68 Identity = 143/222 (64.41%), Postives = 157/222 (70.72%), Query Frame = 0
BLAST of HG10014161 vs. ExPASy TrEMBL
Match: A0A5A7V8F4 (Formin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G001210 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 4.5e-64 Identity = 137/216 (63.43%), Postives = 151/216 (69.91%), Query Frame = 0
BLAST of HG10014161 vs. ExPASy TrEMBL
Match: A0A6J1FKR0 (ribonucleoprotein RB97D-like OS=Cucurbita moschata OX=3662 GN=LOC111446314 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 1.8e-52 Identity = 125/235 (53.19%), Postives = 139/235 (59.15%), Query Frame = 0
BLAST of HG10014161 vs. ExPASy TrEMBL
Match: A0A0A0KZU8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641630 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 2.9e-18 Identity = 60/94 (63.83%), Postives = 65/94 (69.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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