HG10014117 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10014117
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Calcium-binding EF-hand
Location	Chr02: 7718946 .. 7719239 (-)
RNA-Seq Expression	HG10014117
Synteny	HG10014117

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTGAGTTTCGTCTTCAGCAACGGCGTCAGCGACTACAAGCGATGTCCAGTTCCTTTCTCCAGAGACCAGCTTCGCGATATTTTCCTCAAGCACGACGGCGACGGCGACGGCCGACTTTCTCGCTTGGAATTGAAATCGGCCTTCGATTCCTTAGGATCTAATTGGAGCCGTTTCAGAGCTCGTCAGTCTCTCAAAGCCGCCGATTCCGACGGCGATGGTTACGTTACTCTCGATGAACTTGATCGCCTTCTTGATTACGCTGTAAGATGCGATTACGCTATAATTTGA

mRNA sequence

ATGGCGTTGAGTTTCGTCTTCAGCAACGGCGTCAGCGACTACAAGCGATGTCCAGTTCCTTTCTCCAGAGACCAGCTTCGCGATATTTTCCTCAAGCACGACGGCGACGGCGACGGCCGACTTTCTCGCTTGGAATTGAAATCGGCCTTCGATTCCTTAGGATCTAATTGGAGCCGTTTCAGAGCTCGTCAGTCTCTCAAAGCCGCCGATTCCGACGGCGATGGTTACGTTACTCTCGATGAACTTGATCGCCTTCTTGATTACGCTGTAAGATGCGATTACGCTATAATTTGA

Coding sequence (CDS)

ATGGCGTTGAGTTTCGTCTTCAGCAACGGCGTCAGCGACTACAAGCGATGTCCAGTTCCTTTCTCCAGAGACCAGCTTCGCGATATTTTCCTCAAGCACGACGGCGACGGCGACGGCCGACTTTCTCGCTTGGAATTGAAATCGGCCTTCGATTCCTTAGGATCTAATTGGAGCCGTTTCAGAGCTCGTCAGTCTCTCAAAGCCGCCGATTCCGACGGCGATGGTTACGTTACTCTCGATGAACTTGATCGCCTTCTTGATTACGCTGTAAGATGCGATTACGCTATAATTTGA

Protein sequence

MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYAVRCDYAII

Homology

[Close]

BLAST of HG10014117 vs. NCBI nr
Match: KGN55186.1 (hypothetical protein Csa_012423 [Cucumis sativus])

HSP 1 Score: 195.3 bits (495), Expect = 2.5e-46
Identity = 94/97 (96.91%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRF 60
          MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAF+SLGSNWSRF
Sbjct: 1  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRF 60

Query: 61 RARQSLKAADSDGDGYVTLDELDRLLDYAVRCDYAII 98
          RARQSLKAAD+DGDGYVTLDELDRLLDYAVRC+YAII
Sbjct: 61 RARQSLKAADADGDGYVTLDELDRLLDYAVRCEYAII 97

[Close]

BLAST of HG10014117 vs. NCBI nr
Match: KAG6591371.1 (putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 190.3 bits (482), Expect = 7.9e-45
Identity = 90/96 (93.75%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 2   ALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFR 61
           A+SF+F NGVSDYKRCPVPFSR+QLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFR
Sbjct: 102 AMSFIFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFR 161

Query: 62  ARQSLKAADSDGDGYVTLDELDRLLDYAVRCDYAII 98
           ARQSLKAADSDGDGYVTLDELDRLLDY+VRC+YAII
Sbjct: 162 ARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII 197

[Close]

BLAST of HG10014117 vs. NCBI nr
Match: KAA0064377.1 (Calcium-binding EF-hand [Cucumis melo var. makuwa] >TYK20210.1 Calcium-binding EF-hand [Cucumis melo var. makuwa])

HSP 1 Score: 188.3 bits (477), Expect = 3.0e-44
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRF 60
          MAL+FVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRF
Sbjct: 1  MALNFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRF 60

Query: 61 RARQSLKAADSDGDGYVTLDELDRLLDYAVRCDYAII 98
          RARQSLKAAD+DGDGYVTLDELD LLDYAVR +YAII
Sbjct: 61 RARQSLKAADADGDGYVTLDELDGLLDYAVRREYAII 97

[Close]

BLAST of HG10014117 vs. NCBI nr
Match: KAG6608480.1 (putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 162.9 bits (411), Expect = 1.4e-36
Identity = 75/91 (82.42%), Postives = 86/91 (94.51%), Query Frame = 0


Query: 7  FSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSL 66
          F +G+ DYKRCPVPF+++QLR+IFL+HD DGDGRLSRLELK+AF+SLGSNWSRFRARQ L
Sbjct: 4  FRSGICDYKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCL 63

Query: 67 KAADSDGDGYVTLDELDRLLDYAVRCDYAII 98
          KAADS+GDGYVTLDELD LLDYAVRC+YAII
Sbjct: 64 KAADSNGDGYVTLDELDGLLDYAVRCEYAII 94

[Close]

BLAST of HG10014117 vs. NCBI nr
Match: KAG7029343.1 (Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 98.6 bits (244), Expect = 3.1e-17
Identity = 44/83 (53.01%), Postives = 61/83 (73.49%), Query Frame = 0


Query: 14 YKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDG 73
          YKR  VPFS +QL  +F  HDGDGDG+L++ ELK AFD LGS +S FR  ++L+AAD DG
Sbjct: 9  YKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEALRAADIDG 68

Query: 74 DGYVTLDELDRLLDYAVRCDYAI 97
          DG++++ E+D+L+ YA    Y +
Sbjct: 69 DGFISMAEMDKLIQYAKSRKYTL 91

[Close]

BLAST of HG10014117 vs. ExPASy Swiss-Prot
Match: Q8RZB5 (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 GN=CML10 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.7e-08
Identity = 27/68 (39.71%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 18  PVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYV 77
           P P   +++  +F K D +GDGR+SR EL + F+SLG   +     + +  AD+DGDG++
Sbjct: 33  PAPTPEEEMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFI 92

Query: 78  TLDELDRL 86
           +LDE   L
Sbjct: 93  SLDEFAAL 100

[Close]

BLAST of HG10014117 vs. ExPASy Swiss-Prot
Match: Q6L4D4 (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica OX=39947 GN=CML15 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.2e-07
Identity = 26/62 (41.94%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 20  PFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTL 79
           P + D+   +F K D +GDGR+SR EL + F S+G   +     + ++ ADSDGDGY++L
Sbjct: 50  PAAEDETERVFRKFDANGDGRISRAELAALFRSVGHAVTDDEVARMMQEADSDGDGYISL 109

Query: 80  DE 82
            E
Sbjct: 110 GE 111

[Close]

BLAST of HG10014117 vs. ExPASy Swiss-Prot
Match: Q9LE22 (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.4e-06
Identity = 22/62 (35.48%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 24 DQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELD 83
          ++L+ +F + D +GDG++S LEL   F ++G++++     + L+  D+D DGY+ LDE  
Sbjct: 22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 84 RL 86
           L
Sbjct: 82 TL 83

[Close]

BLAST of HG10014117 vs. ExPASy Swiss-Prot
Match: O64943 (Polcalcin Jun o 2 OS=Juniperus oxycedrus OX=69008 PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 4.4e-06
Identity = 24/57 (42.11%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 25 QLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDE 82
          +L ++F K D +GDG++S  EL     SLGS+      +  ++ AD+DGDGYV+L E
Sbjct: 26 ELEEVFKKFDANGDGKISGSELADILRSLGSDVGEAEVKAMMEEADADGDGYVSLQE 82

[Close]

BLAST of HG10014117 vs. ExPASy Swiss-Prot
Match: A0T2M3 (Polcalcin Cup a 4 OS=Hesperocyparis arizonica OX=49011 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 9.9e-06
Identity = 23/57 (40.35%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 25 QLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDE 82
          +L ++F K D +GDG++S  EL     S+GS       +  ++ AD+DGDGYV+L E
Sbjct: 26 ELEEVFKKFDANGDGKISGSELADILRSMGSEVDEAEVKAMMEEADTDGDGYVSLQE 82

[Close]

BLAST of HG10014117 vs. ExPASy TrEMBL
Match: A0A0A0L4V0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639740 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.2e-46
Identity = 94/97 (96.91%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRF 60
          MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAF+SLGSNWSRF
Sbjct: 1  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRF 60

Query: 61 RARQSLKAADSDGDGYVTLDELDRLLDYAVRCDYAII 98
          RARQSLKAAD+DGDGYVTLDELDRLLDYAVRC+YAII
Sbjct: 61 RARQSLKAADADGDGYVTLDELDRLLDYAVRCEYAII 97

[Close]

BLAST of HG10014117 vs. ExPASy TrEMBL
Match: A0A5A7VBH2 (Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003470 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.5e-44
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRF 60
          MAL+FVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRF
Sbjct: 1  MALNFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRF 60

Query: 61 RARQSLKAADSDGDGYVTLDELDRLLDYAVRCDYAII 98
          RARQSLKAAD+DGDGYVTLDELD LLDYAVR +YAII
Sbjct: 61 RARQSLKAADADGDGYVTLDELDGLLDYAVRREYAII 97

[Close]

BLAST of HG10014117 vs. ExPASy TrEMBL
Match: A0A7N2KRS3 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 4.4e-17
Identity = 44/83 (53.01%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 14  YKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDG 73
           +KR  VPF+  QL +IF  HD DGDG+LSR ELK+AF  LGS W  +R  Q+L+ AD++ 
Sbjct: 238 FKRTSVPFNEQQLLNIFKSHDVDGDGKLSRDELKNAFKYLGSRWDAYRTDQALRQADAND 297

Query: 74  DGYVTLDELDRLLDYAVRCDYAI 97
           DGY+T DEL +L++YA+ C Y +
Sbjct: 298 DGYITEDELKKLVEYALDCGYTV 320

[Close]

BLAST of HG10014117 vs. ExPASy TrEMBL
Match: A0A2N9FYQ0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20260 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.7e-16
Identity = 42/86 (48.84%), Postives = 59/86 (68.60%), Query Frame = 0


Query: 11 VSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAAD 70
          V  +KR  +PF+ +QL +IF  HD DGDG+LS+ E+K AF  LGS W  +RA Q++  AD
Sbjct: 5  VMSFKRTTIPFTEEQLMNIFKSHDADGDGKLSQDEVKKAFKYLGSRWDAYRANQAIHLAD 64

Query: 71 SDGDGYVTLDELDRLLDYAVRCDYAI 97
          +D DGY+  +EL +L+ YA+ C Y I
Sbjct: 65 ADDDGYIEEEELKKLVQYALDCGYTI 90

[Close]

BLAST of HG10014117 vs. ExPASy TrEMBL
Match: A0A5N6RQV2 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018544 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.2e-16
Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 0


Query: 11 VSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAAD 70
          V+ +K   V F+RDQL +IF  HD DGDG+LSR E+K+AF  LGS W  +RA  +L  AD
Sbjct: 5  VTMFKPVSVSFTRDQLMNIFRSHDLDGDGKLSRKEVKAAFGYLGSRWDSYRAVLALLHAD 64

Query: 71 SDGDGYVTLDELDRLLDYAVRCDYAI 97
          SD DGYV  +EL +L+DYA++C Y I
Sbjct: 65 SDHDGYVGEEELKKLVDYALKCGYTI 90

[Close]

BLAST of HG10014117 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 52.0 bits (123), Expect = 3.1e-07
Identity = 22/62 (35.48%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 24 DQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELD 83
          ++L+ +F + D +GDG++S LEL   F ++G++++     + L+  D+D DGY+ LDE  
Sbjct: 22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 84 RL 86
           L
Sbjct: 82 TL 83

[Close]

BLAST of HG10014117 vs. TAIR 10
Match: AT1G18210.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 52.0 bits (123), Expect = 3.1e-07
Identity = 22/62 (35.48%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 24 DQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELD 83
          ++L+ +F + D +GDG++S LEL   F ++G++++     + L+  D+D DGY+ LDE  
Sbjct: 22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 84 RL 86
           L
Sbjct: 82 TL 83

[Close]

BLAST of HG10014117 vs. TAIR 10
Match: AT3G50770.1 (calmodulin-like 41 )

HSP 1 Score: 48.5 bits (114), Expect = 3.5e-06
Identity = 22/65 (33.85%), Postives = 39/65 (60.00%), Query Frame = 0


Query: 22  SRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDE 81
           S+++LR +F   D DGDG++S  EL+  F S+G   S   A++++   D+D DG +  ++
Sbjct: 61  SKEELRQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFED 120

Query: 82  LDRLL 87
              L+
Sbjct: 121 FVGLM 125

[Close]

BLAST of HG10014117 vs. TAIR 10
Match: AT3G03410.1 (EF hand calcium-binding protein family )

HSP 1 Score: 46.2 bits (108), Expect = 1.7e-05
Identity = 22/61 (36.07%), Postives = 36/61 (59.02%), Query Frame = 0


Query: 26  LRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRL 85
           L+++F+  D DGDG++   E      SLG  ++   + + ++AAD DGDGY+  DE   L
Sbjct: 67  LKEVFVFCDVDGDGKIPASESYVTMTSLGKKFTEETSAEKVRAADVDGDGYLNFDEFMAL 126

Query: 86  L 87
           +
Sbjct: 127 V 127

[Close]

BLAST of HG10014117 vs. TAIR 10
Match: AT1G18530.1 (EF hand calcium-binding protein family )

HSP 1 Score: 45.1 bits (105), Expect = 3.8e-05
Identity = 26/58 (44.83%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 25 QLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDEL 83
          QL+DIF + D D DG L+ LEL +   SLG   S  +    L + DS+G+G+V  DEL
Sbjct: 7  QLKDIFDRFDMDADGSLTILELAALLRSLGLKPSGDQIHVLLASMDSNGNGFVEFDEL 64

The following BLAST results are available for this feature:

BLAST of HG10014117 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55186.1	2.5e-46	96.91	hypothetical protein Csa_012423 [Cucumis sativus]	[more]
KAG6591371.1	7.9e-45	93.75	putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. s...	[more]
KAA0064377.1	3.0e-44	94.85	Calcium-binding EF-hand [Cucumis melo var. makuwa] >TYK20210.1 Calcium-binding E...	[more]
KAG6608480.1	1.4e-36	82.42	putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. s...	[more]
KAG7029343.1	3.1e-17	53.01	Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]

BLAST of HG10014117 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RZB5	4.7e-08	39.71	Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q6L4D4	5.2e-07	41.94	Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9LE22	4.4e-06	35.48	Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 ...	[more]
O64943	4.4e-06	42.11	Polcalcin Jun o 2 OS=Juniperus oxycedrus OX=69008 PE=1 SV=2	[more]
A0T2M3	9.9e-06	40.35	Polcalcin Cup a 4 OS=Hesperocyparis arizonica OX=49011 PE=1 SV=1	[more]

BLAST of HG10014117 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4V0	1.2e-46	96.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639740 PE=4 SV=1	[more]
A0A5A7VBH2	1.5e-44	94.85	Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A7N2KRS3	4.4e-17	53.01	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A2N9FYQ0	1.7e-16	48.84	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20260 PE=4 SV=1	[more]
A0A5N6RQV2	2.2e-16	54.65	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018544 PE=4 SV=1	[more]

BLAST of HG10014117 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18210.1	3.1e-07	35.48	Calcium-binding EF-hand family protein	[more]
AT1G18210.2	3.1e-07	35.48	Calcium-binding EF-hand family protein	[more]
AT3G50770.1	3.5e-06	33.85	calmodulin-like 41	[more]
AT3G03410.1	1.7e-05	36.07	EF hand calcium-binding protein family	[more]
AT1G18530.1	3.8e-05	44.83	EF hand calcium-binding protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 61..89 e-value: 5.7 score: 11.6 coord: 25..53 e-value: 0.11 score: 21.5
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 24..82 e-value: 1.8E-9 score: 37.9
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 21..56 score: 13.09074
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 57..92 score: 9.603815
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 25..86 e-value: 3.27953E-12 score: 54.4761
None	No IPR available	GENE3D	1.10.238.10		coord: 9..90 e-value: 4.9E-14 score: 54.6
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 15..91
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 15..91
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 34..46
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 70..82
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 23..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10014117.1	HG10014117.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding