HG10014104 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGCAATATCACTCAATCTCTTTCTCTCTATAGCAGCCGCCCTCTTCATTTTATCTTCCATCTCCAATATAGAAGCAAGATTCCTACCGATGAAGCATCCCAACGTCGATATTCACGAAAATCTCCACCGTGAGATCGTAGAAACTGTCGCCGTTGCTCCTCTCAAGTCGGGGCCACCAGCATTTGATCACCACACTCCCTTAGCTGCTAGCGACGCGGAGGTTCTAGGCGGCGACTTCCGTCCAACCACCCCGGGCCACAGCCCTGGAGCCGGTCACTCTCTTGCACCAGCCAGCCATATGGATTCCAAAATTCATTAG ATGACTGCAATATCACTCAATCTCTTTCTCTCTATAGCAGCCGCCCTCTTCATTTTATCTTCCATCTCCAATATAGAAGCAAGATTCCTACCGATGAAGCATCCCAACGTCGATATTCACGAAAATCTCCACCGTGAGATCGTAGAAACTGTCGCCGTTGCTCCTCTCAAGTCGGGGCCACCAGCATTTGATCACCACACTCCCTTAGCTGCTAGCGACGCGGAGGTTCTAGGCGGCGACTTCCGTCCAACCACCCCGGGCCACAGCCCTGGAGCCGGTCACTCTCTTGCACCAGCCAGCCATATGGATTCCAAAATTCATTAG ATGACTGCAATATCACTCAATCTCTTTCTCTCTATAGCAGCCGCCCTCTTCATTTTATCTTCCATCTCCAATATAGAAGCAAGATTCCTACCGATGAAGCATCCCAACGTCGATATTCACGAAAATCTCCACCGTGAGATCGTAGAAACTGTCGCCGTTGCTCCTCTCAAGTCGGGGCCACCAGCATTTGATCACCACACTCCCTTAGCTGCTAGCGACGCGGAGGTTCTAGGCGGCGACTTCCGTCCAACCACCCCGGGCCACAGCCCTGGAGCCGGTCACTCTCTTGCACCAGCCAGCCATATGGATTCCAAAATTCATTAG MTAISLNLFLSIAAALFILSSISNIEARFLPMKHPNVDIHENLHREIVETVAVAPLKSGPPAFDHHTPLAASDAEVLGGDFRPTTPGHSPGAGHSLAPASHMDSKIH Homology
BLAST of HG10014104 vs. NCBI nr
Match: TYK20222.1 (hypothetical protein E5676_scaffold134G003590 [Cucumis melo var. makuwa]) HSP 1 Score: 135.2 bits (339), Expect = 3.3e-28 Identity = 72/102 (70.59%), Postives = 83/102 (81.37%), Query Frame = 0
BLAST of HG10014104 vs. NCBI nr
Match: KAA0064365.1 (hypothetical protein E6C27_scaffold255G00660 [Cucumis melo var. makuwa]) HSP 1 Score: 129.8 bits (325), Expect = 1.4e-26 Identity = 69/102 (67.65%), Postives = 82/102 (80.39%), Query Frame = 0
BLAST of HG10014104 vs. NCBI nr
Match: KAG6591363.1 (Precursor of CEP5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 117.5 bits (293), Expect = 7.2e-23 Identity = 68/106 (64.15%), Postives = 73/106 (68.87%), Query Frame = 0
BLAST of HG10014104 vs. NCBI nr
Match: KGN55172.1 (hypothetical protein Csa_012400 [Cucumis sativus]) HSP 1 Score: 114.0 bits (284), Expect = 8.0e-22 Identity = 67/111 (60.36%), Postives = 81/111 (72.97%), Query Frame = 0
BLAST of HG10014104 vs. NCBI nr
Match: KAG7024239.1 (Polyadenylate-binding protein RBP47C, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 102.8 bits (255), Expect = 1.8e-18 Identity = 59/92 (64.13%), Postives = 63/92 (68.48%), Query Frame = 0
BLAST of HG10014104 vs. ExPASy TrEMBL
Match: A0A5D3D9H8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003590 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.6e-28 Identity = 72/102 (70.59%), Postives = 83/102 (81.37%), Query Frame = 0
BLAST of HG10014104 vs. ExPASy TrEMBL
Match: A0A5A7VEP2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G00660 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 6.8e-27 Identity = 69/102 (67.65%), Postives = 82/102 (80.39%), Query Frame = 0
BLAST of HG10014104 vs. ExPASy TrEMBL
Match: A0A0A0L3I5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639110 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.9e-22 Identity = 67/111 (60.36%), Postives = 81/111 (72.97%), Query Frame = 0
BLAST of HG10014104 vs. TAIR 10
Match: AT5G66815.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 41.2 bits (95), Expect = 6.1e-04 Identity = 22/40 (55.00%), Postives = 24/40 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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