HG10013928 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013928
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Actin-binding transcription modulator
Location	Chr02: 6128332 .. 6130380 (+)
RNA-Seq Expression	HG10013928
Synteny	HG10013928

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCACGGAGAAACCAGTAATAATGTTAATGTTACGGTTCGGAATTCTCCACAACCGCCGCCGCTGGAGGAGCAGGAACAACAACAACTGACAGAACCACTGCCGAAATCATTCCAAGAAGATGAACAAGATGAAGAGTTACGTAAACTTCTGATTCCCGATGTTAGGGATCTTCCGCTCGCGCCTCCCTCCGCCGTCGAGACCAATTTCGTCTCCTATTTCGCTCCTGGCACGTTCGCTGTCCCATATCTTTTTCAAATTCACAATGGAGGTTTTATTGCTCTAACTAAACCCTAAACCCTTTAATTACTCTGACTAATTGGTCATCTGATTTCCAGATTTTATCAAGGAAGGTCATGATCAGTACGTTTACCGCCACGCAAACGGGTAACGATTTTGATATCTCTTTTAGTTTATCCGATGAACAATTTCCCGCTCATCGTATTTACTATTTTGCCTGTCTTTCTTATTCTAGCTTGTGTGTGATCGGCTTGGCTGCTACGCATATTGCATTCAAAGACAGTGGCGGTGTCACGGCCGTTGATTTCAATGTAGGGAAATCCGATCGCAGCAGCTTTAAAGTCACTGGGAAACGCAAGAAGGTATAGAAATGGTAATTACGGACTTGCGAACTGGTTCGTGTTACTTGGTGATTAAAGAAACAGTGTTGCTAGAAACTAACCTATATACATTGTGATAAAATCTCACTTACTCTTAAGGTGCTGGTTTCGCCTCGTGTGAGTTATGTTGCCTTGGATTTTATGAAATTATCGTCATTAGAAGATTATGTCAATTTCCTATATGATTGTTTATGAACTATATCATAATTCACCATATCACAGACAGTAACATGTTTCAGAACCAGCCTTGGCTTGTGGAGTTCTTTTGTCATAATGGAGGTTTCTTTTTAGTAGAATTTTGATGAACCATAAGAACTGGCATCAGTAGGTTTTACATATATGATAGCCAAACTTTTACTAAATTTCTTTTTGCACTTCTTTACACCTTCAACTTGAAATTTAAAACTCCTGTCCTGTTTGTGAATCTGGATACTGGGATTTAATTATCTGTGCTGAAGTCACTAGTGTTATTTTGCAGAATGCGCAATTCTTTGAGCCCAATTCTGCTCTATGTAAAGTCTGCACCAAAGAGGCTTCTTATATTGTAAGGTTGGATCTTTTGGCTTTTCACCAATTCTGATAACGACATGTCATTTAGCTTCTCTTCAATTGCAACTCAGATCTTTTATGTTATTGTTAGGTGTTCTGTTAAAGGTTCTCTATTGGAAGTAAATGATCGCTTAATAAAGCAGCCAGAGTTGCTCAACACTGTGGTGAGGATAACCTTTTAATTTTATGGCCAATTGGGGTTTAAGAATATTAATTGCTGATACTGTAGTTTGCAAAAACGTGGTTGTTATGCATTCCTATGAGCACGCTACATTACTAATATTTGTCTTATCCCAGATTTTAAAAATCACATGTGGAAGATAACGCTGATATAGTAGCAGATTTACTGTATTAGATCGGCTGAATGAAATTTTACACTGTTACTTCTTTATAGTTTGTGGGTAGATGAGTTCCCTTGTTAGATTTTTCTTTTTATTGTACTAACACAGGCAAGAAAAGCAACTGCTGTTGAAATTTCTAACTAATGCTTAAGCGGAAAATTTCCCAGAAACTTTTGGAGGAAAAGATTGTTCTGATTTTTACTATTGTCACCGATTATTACATATAGTATGAAATTATATTGAAGCAAATTAGAAGAAGGGAAAGAAAGCATGTCTTCCTTTCTTATTTGTAACTTTATGCTATGAAAACAAGAAGAGCCAGTCATCTTTAGTGTTCATTTTCGATTCGCTTACCTTAAGGGGAAAAAATACAAACAAGATTTATACATGTTCAAATGACTTGACTTTTTATATTATGACAGGCTCACAGAGAAGGGTATATTGCTATTGTTATGCCAAAAGCAGCAGACTGGCTTAAAGTGAAGGAGTCATTGCTGAGCCTTGAACAATACAAAAGATTGAGAGAGGTGCACTGA

mRNA sequence

ATGGAGCACGGAGAAACCAGTAATAATGTTAATGTTACGGTTCGGAATTCTCCACAACCGCCGCCGCTGGAGGAGCAGGAACAACAACAACTGACAGAACCACTGCCGAAATCATTCCAAGAAGATGAACAAGATGAAGAGTTACGTAAACTTCTGATTCCCGATGTTAGGGATCTTCCGCTCGCGCCTCCCTCCGCCGTCGAGACCAATTTCGTCTCCTATTTCGCTCCTGGCACGTTCGCTGTCCCATATCTTTTTCAAATTCACAATGGAGATTTTATCAAGGAAGGTCATGATCAGTACGTTTACCGCCACGCAAACGGCTTGTGTGTGATCGGCTTGGCTGCTACGCATATTGCATTCAAAGACAGTGGCGGTGTCACGGCCGTTGATTTCAATGTAGGGAAATCCGATCGCAGCAGCTTTAAAGTCACTGGGAAACGCAAGAAGAATGCGCAATTCTTTGAGCCCAATTCTGCTCTATGTAAAGTCTGCACCAAAGAGGCTTCTTATATTGTAAGGTGTTCTGTTAAAGGTTCTCTATTGGAAGTAAATGATCGCTTAATAAAGCAGCCAGAGTTGCTCAACACTGTGGCTCACAGAGAAGGGTATATTGCTATTGTTATGCCAAAAGCAGCAGACTGGCTTAAAGTGAAGGAGTCATTGCTGAGCCTTGAACAATACAAAAGATTGAGAGAGGTGCACTGA

Coding sequence (CDS)

ATGGAGCACGGAGAAACCAGTAATAATGTTAATGTTACGGTTCGGAATTCTCCACAACCGCCGCCGCTGGAGGAGCAGGAACAACAACAACTGACAGAACCACTGCCGAAATCATTCCAAGAAGATGAACAAGATGAAGAGTTACGTAAACTTCTGATTCCCGATGTTAGGGATCTTCCGCTCGCGCCTCCCTCCGCCGTCGAGACCAATTTCGTCTCCTATTTCGCTCCTGGCACGTTCGCTGTCCCATATCTTTTTCAAATTCACAATGGAGATTTTATCAAGGAAGGTCATGATCAGTACGTTTACCGCCACGCAAACGGCTTGTGTGTGATCGGCTTGGCTGCTACGCATATTGCATTCAAAGACAGTGGCGGTGTCACGGCCGTTGATTTCAATGTAGGGAAATCCGATCGCAGCAGCTTTAAAGTCACTGGGAAACGCAAGAAGAATGCGCAATTCTTTGAGCCCAATTCTGCTCTATGTAAAGTCTGCACCAAAGAGGCTTCTTATATTGTAAGGTGTTCTGTTAAAGGTTCTCTATTGGAAGTAAATGATCGCTTAATAAAGCAGCCAGAGTTGCTCAACACTGTGGCTCACAGAGAAGGGTATATTGCTATTGTTATGCCAAAAGCAGCAGACTGGCTTAAAGTGAAGGAGTCATTGCTGAGCCTTGAACAATACAAAAGATTGAGAGAGGTGCACTGA

Protein sequence

MEHGETSNNVNVTVRNSPQPPPLEEQEQQQLTEPLPKSFQEDEQDEELRKLLIPDVRDLPLAPPSAVETNFVSYFAPGTFAVPYLFQIHNGDFIKEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVCTKEASYIVRCSVKGSLLEVNDRLIKQPELLNTVAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH

Homology

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BLAST of HG10013928 vs. NCBI nr
Match: XP_038896120.1 (protein Abitram [Benincasa hispida] >XP_038896121.1 protein Abitram [Benincasa hispida] >XP_038896122.1 protein Abitram [Benincasa hispida])

HSP 1 Score: 412.1 bits (1058), Expect = 3.1e-111
Identity = 212/235 (90.21%), Postives = 220/235 (93.62%), Query Frame = 0


Query: 1   MEHGETSNNVNVTVRNSPQPPPLEEQEQQQLTEPLPKSFQEDEQDEELRKLLIPDVRDLP 60
           MEHGET+NNV+VTV+NSPQPPPLEEQE QQLTEPLPKSFQEDEQDEELRKLLIPDVRDLP
Sbjct: 1   MEHGETNNNVHVTVQNSPQPPPLEEQELQQLTEPLPKSFQEDEQDEELRKLLIPDVRDLP 60

Query: 61  LAPPSAVETNFVSYFAPGTFAVPYLFQIHNGDFIKEGHDQYVYRHANGLCVIGLAATHIA 120
           LAPPSAVETNFVSYFAP              DFIKEGHDQYVYRHANGLCVIGLAATHIA
Sbjct: 61  LAPPSAVETNFVSYFAP--------------DFIKEGHDQYVYRHANGLCVIGLAATHIA 120

Query: 121 FKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVCTKEASYIVRCSVKGS 180
           FKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVCTK+ASYIVRCSVKGS
Sbjct: 121 FKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVCTKDASYIVRCSVKGS 180

Query: 181 LLEVNDRLIKQPELLNTVAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH 236
           LLEVNDRL+KQPELLNTVAHREGYIAIVMPKAADWLKVKESLLSLE+YKRLRE++
Sbjct: 181 LLEVNDRLMKQPELLNTVAHREGYIAIVMPKAADWLKVKESLLSLEEYKRLRELN 221

[Close]

BLAST of HG10013928 vs. NCBI nr
Match: XP_008466465.1 (PREDICTED: protein Simiate [Cucumis melo] >XP_016903582.1 PREDICTED: protein Simiate [Cucumis melo] >TYK31468.1 protein Simiate [Cucumis melo var. makuwa])

HSP 1 Score: 383.3 bits (983), Expect = 1.5e-102
Identity = 201/237 (84.81%), Postives = 212/237 (89.45%), Query Frame = 0


Query: 1   MEHGETSNNVNVTVRNSPQP--PPLEEQEQQQLTEPLPKSFQEDEQDEELRKLLIPDVRD 60
           MEHG+T+N+V+VTV++S  P  PPLE+QE QQL EPLPKSFQEDEQDEELRKLL PDVRD
Sbjct: 1   MEHGDTNNDVHVTVQSSSPPPLPPLEKQELQQLAEPLPKSFQEDEQDEELRKLLTPDVRD 60

Query: 61  LPLAPPSAVETNFVSYFAPGTFAVPYLFQIHNGDFIKEGHDQYVYRHANGLCVIGLAATH 120
           LPL PPSAVETNFVSYFAP              DFIKEGHDQYVYRHANGLCVIGLAATH
Sbjct: 61  LPLVPPSAVETNFVSYFAP--------------DFIKEGHDQYVYRHANGLCVIGLAATH 120

Query: 121 IAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVCTKEASYIVRCSVK 180
           IAFKD GGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKV TK+ASYIVRCSVK
Sbjct: 121 IAFKDGGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVYTKDASYIVRCSVK 180

Query: 181 GSLLEVNDRLIKQPELLNTVAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH 236
           GSLLEVNDRLIKQPELLNTV HREGYIAIVMPKAADWLKVKESLLSLE+YKRLRE++
Sbjct: 181 GSLLEVNDRLIKQPELLNTVPHREGYIAIVMPKAADWLKVKESLLSLEEYKRLRELN 223

[Close]

BLAST of HG10013928 vs. NCBI nr
Match: KAA0063309.1 (protein Simiate [Cucumis melo var. makuwa])

HSP 1 Score: 379.8 bits (974), Expect = 1.7e-101
Identity = 200/237 (84.39%), Postives = 211/237 (89.03%), Query Frame = 0


Query: 1   MEHGETSNNVNVTVRNSPQP--PPLEEQEQQQLTEPLPKSFQEDEQDEELRKLLIPDVRD 60
           MEHG+T+N+V+VTV++S  P  PPLE+QE QQL EPL KSFQEDEQDEELRKLL PDVRD
Sbjct: 1   MEHGDTNNDVHVTVQSSSPPPLPPLEKQELQQLAEPLRKSFQEDEQDEELRKLLTPDVRD 60

Query: 61  LPLAPPSAVETNFVSYFAPGTFAVPYLFQIHNGDFIKEGHDQYVYRHANGLCVIGLAATH 120
           LPL PPSAVETNFVSYFAP              DFIKEGHDQYVYRHANGLCVIGLAATH
Sbjct: 61  LPLVPPSAVETNFVSYFAP--------------DFIKEGHDQYVYRHANGLCVIGLAATH 120

Query: 121 IAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVCTKEASYIVRCSVK 180
           IAFKD GGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKV TK+ASYIVRCSVK
Sbjct: 121 IAFKDGGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVYTKDASYIVRCSVK 180

Query: 181 GSLLEVNDRLIKQPELLNTVAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH 236
           GSLLEVNDRLIKQPELLNTV HREGYIAIVMPKAADWLKVKESLLSLE+YKRLRE++
Sbjct: 181 GSLLEVNDRLIKQPELLNTVPHREGYIAIVMPKAADWLKVKESLLSLEEYKRLRELN 223

[Close]

BLAST of HG10013928 vs. NCBI nr
Match: XP_004136372.1 (protein Abitram [Cucumis sativus] >KGN60055.1 hypothetical protein Csa_001950 [Cucumis sativus])

HSP 1 Score: 377.9 bits (969), Expect = 6.5e-101
Identity = 199/237 (83.97%), Postives = 210/237 (88.61%), Query Frame = 0


Query: 1   MEHGETSNNVNVTVRN-SPQ-PPPLEEQEQQQLTEPLPKSFQEDEQDEELRKLLIPDVRD 60
           MEHGET N+V++TV+N SP  PPPLE  E QQL EPLPKSFQEDEQDEELRKLL PDVRD
Sbjct: 1   MEHGETDNDVHMTVQNPSPSPPPPLENHELQQLAEPLPKSFQEDEQDEELRKLLTPDVRD 60

Query: 61  LPLAPPSAVETNFVSYFAPGTFAVPYLFQIHNGDFIKEGHDQYVYRHANGLCVIGLAATH 120
           LPL PPSAVETNFVSYFAP              DFIKEGHDQYVYRHANGLCV+GLAATH
Sbjct: 61  LPLVPPSAVETNFVSYFAP--------------DFIKEGHDQYVYRHANGLCVVGLAATH 120

Query: 121 IAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVCTKEASYIVRCSVK 180
           IAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKV TK+ASYIVRCSVK
Sbjct: 121 IAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVYTKDASYIVRCSVK 180

Query: 181 GSLLEVNDRLIKQPELLNTVAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH 236
           GSLLEVNDRLIKQPELLNT+ HREGYIAIVMPK ADWLKVKESLLSLE++KRLRE++
Sbjct: 181 GSLLEVNDRLIKQPELLNTLPHREGYIAIVMPKPADWLKVKESLLSLEEHKRLRELN 223

[Close]

BLAST of HG10013928 vs. NCBI nr
Match: XP_022142526.1 (protein Simiate [Momordica charantia])

HSP 1 Score: 367.5 bits (942), Expect = 8.8e-98
Identity = 189/234 (80.77%), Postives = 207/234 (88.46%), Query Frame = 0


Query: 1   MEHGETSNNVNVTVRNSPQPPPLEEQEQQQLTEPLPKSFQEDEQDEELRKLLIPDVRDLP 60
           MEHG T ++V  TVRN+PQP P EEQ+QQQ  +PLP+  QEDEQDEELR+LL+PDVRDLP
Sbjct: 1   MEHGGT-DDVQTTVRNTPQPQPPEEQQQQQPAQPLPRPSQEDEQDEELRRLLVPDVRDLP 60

Query: 61  LAPPSAVETNFVSYFAPGTFAVPYLFQIHNGDFIKEGHDQYVYRHANGLCVIGLAATHIA 120
           L+PPSAV+TNFVSYF P              DF+K+GHDQYVYRHANGLCVIGLA+THIA
Sbjct: 61  LSPPSAVDTNFVSYFVP--------------DFMKQGHDQYVYRHANGLCVIGLASTHIA 120

Query: 121 FKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVCTKEASYIVRCSVKGS 180
           FKDSGG+TAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKV TK+ASYIVRCSVKGS
Sbjct: 121 FKDSGGITAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVVTKDASYIVRCSVKGS 180

Query: 181 LLEVNDRLIKQPELLNTVAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREV 235
           LLEVNDRL+KQPELLNTVAHREGYIAIVMPK ADWLKVKESLLSLE+YKRLRE+
Sbjct: 181 LLEVNDRLMKQPELLNTVAHREGYIAIVMPKPADWLKVKESLLSLEEYKRLREM 219

[Close]

BLAST of HG10013928 vs. ExPASy Swiss-Prot
Match: Q80ZQ9 (Protein Abitram OS=Mus musculus OX=10090 GN=Abitram PE=1 SV=2)

HSP 1 Score: 92.8 bits (229), Expect = 5.5e-18
Identity = 58/187 (31.02%), Postives = 95/187 (50.80%), Query Frame = 0


Query: 48  LRKLLIPDVRDLPLAPPSAVETNFVSYFAPGTFAVPYLFQIHNGDFI-KEGHDQYVYRHA 107
           + +L  P+ +   LAPP  V     +   P +    Y  + +  D   K   D  + +H+
Sbjct: 1   MEELRCPEAK---LAPPEVV---IATEAPPPSLVDRYFTRWYKADVKGKPCEDHCILQHS 60

Query: 108 NGLCVIGLAATHIAFKDSGGVTAVDFNVGKS-DRSSFKVTGKRKKNAQFFEPNSALCKV- 167
           N +CVI LA +H   +    +  + + +  +  R   KV+GK K+ AQF    + LCK+ 
Sbjct: 61  NRICVITLAGSHPVLQSGKAIQRISYQISNNCSRLENKVSGKFKRGAQFLTELAPLCKIY 120

Query: 168 CTKEASYIVRCSVKGSLLEVNDRLIKQPELLNTVAHREGYIAIVMPKAADWLKVKESLLS 227
           C+    Y +   V+G L+EVN+ ++ QP LL      EGYIA+V+PK  +   V E LL+
Sbjct: 121 CSDGEEYTISSCVRGRLMEVNENILHQPSLLQEKPSTEGYIAVVLPKFEESKSVTEGLLT 180

Query: 228 LEQYKRL 232
            +QY+ +
Sbjct: 181 QQQYEEV 181

[Close]

BLAST of HG10013928 vs. ExPASy Swiss-Prot
Match: Q1LU93 (Protein Abitram OS=Danio rerio OX=7955 GN=abitram PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-17
Identity = 47/139 (33.81%), Postives = 80/139 (57.55%), Query Frame = 0


Query: 95  KEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKS-DRSSFKVTGKRKKNAQ 154
           K   D  + +H+N +CVI LA +H  F++   +  +++ +     R   KV+GK K+  Q
Sbjct: 28  KPCEDHCILQHSNRICVITLAESHPIFQNGRKIKNINYQISDGCSRLKNKVSGKSKRGGQ 87

Query: 155 FFEPNSALCKV-CTKEASYIVRCSVKGSLLEVNDRLIKQPELLNTVAHREGYIAIVMPKA 214
           F    + LC++ CT E  + +   ++G LLEVN+ ++ +P+LL      EGYIA+++PK 
Sbjct: 88  FLTEFAPLCRITCTDEQEFTIFSCIRGRLLEVNEVILNKPDLLMEKPSTEGYIAVILPKF 147

Query: 215 ADWLKVKESLLSLEQYKRL 232
            +   V E LL+ EQY+ +
Sbjct: 148 EESKSVTEGLLTREQYEEI 166

[Close]

BLAST of HG10013928 vs. ExPASy Swiss-Prot
Match: Q9NX38 (Protein Abitram OS=Homo sapiens OX=9606 GN=ABITRAM PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.6e-17
Identity = 52/170 (30.59%), Postives = 88/170 (51.76%), Query Frame = 0


Query: 64  PSAVETNFVSYFAPGTFAVPYLFQIHNGDFIKEGHDQYVYRHANGLCVIGLAATHIAFKD 123
           PS V+  F  ++ P             G F +   D  + +H+N +CVI LA +H   + 
Sbjct: 13  PSLVDRYFTRWYKPDV----------KGKFCE---DHCILQHSNRICVITLAESHPVLQS 72

Query: 124 SGGVTAVDFNVGKS-DRSSFKVTGKRKKNAQFFEPNSALCKV-CTKEASYIVRCSVKGSL 183
              + ++ + +  +  R   KV+GK K+ AQF    + LCK+ C+    Y V   V+G L
Sbjct: 73  GKTIKSISYQISTNCSRLQNKVSGKFKRGAQFLTELAPLCKIYCSDGEEYTVSSCVRGRL 132

Query: 184 LEVNDRLIKQPELLNTVAHREGYIAIVMPKAADWLKVKESLLSLEQYKRL 232
           +EVN+ ++ +P +L      EGYIA+V+PK  +   + E LL+ +QY+ +
Sbjct: 133 MEVNENILHKPSILQEKPSTEGYIAVVLPKFEESKSITEGLLTQKQYEEV 169

[Close]

BLAST of HG10013928 vs. ExPASy Swiss-Prot
Match: Q5RFS0 (Protein Abitram OS=Pongo abelii OX=9601 GN=ABITRAM PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.6e-17
Identity = 52/170 (30.59%), Postives = 88/170 (51.76%), Query Frame = 0


Query: 64  PSAVETNFVSYFAPGTFAVPYLFQIHNGDFIKEGHDQYVYRHANGLCVIGLAATHIAFKD 123
           PS V+  F  ++ P             G F +   D  + +H+N +CVI LA +H   + 
Sbjct: 13  PSLVDRYFTRWYKPDV----------KGKFCE---DHCILQHSNRICVITLAESHPVLQS 72

Query: 124 SGGVTAVDFNVGKS-DRSSFKVTGKRKKNAQFFEPNSALCKV-CTKEASYIVRCSVKGSL 183
              + ++ + +  +  R   KV+GK K+ AQF    + LCK+ C+    Y V   V+G L
Sbjct: 73  GKTIKSISYQISTNCSRLQNKVSGKFKRGAQFLTELAPLCKIYCSDGEEYTVSSCVRGRL 132

Query: 184 LEVNDRLIKQPELLNTVAHREGYIAIVMPKAADWLKVKESLLSLEQYKRL 232
           +EVN+ ++ +P +L      EGYIA+V+PK  +   + E LL+ +QY+ +
Sbjct: 133 MEVNENILHKPSILQEKPSTEGYIAVVLPKFEESKSITEGLLTQKQYEEV 169

[Close]

BLAST of HG10013928 vs. ExPASy Swiss-Prot
Match: Q28G67 (Protein Abitram OS=Xenopus tropicalis OX=8364 GN=abitram PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.1e-17
Identity = 45/139 (32.37%), Postives = 79/139 (56.83%), Query Frame = 0


Query: 95  KEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKS-DRSSFKVTGKRKKNAQ 154
           K   D  + +H+N +C+I LA  H   ++   +  + + +  +  R   KV+GK K+ AQ
Sbjct: 30  KPCEDHCILQHSNRICIITLAECHPLLQNGKTIKTISYQISANCSRLQNKVSGKSKRGAQ 89

Query: 155 FFEPNSALCKVCTKEA-SYIVRCSVKGSLLEVNDRLIKQPELLNTVAHREGYIAIVMPKA 214
           F   ++ LC++ + +   Y +   ++G LLEVN+ +++ PELL      EGYIA+V+PK 
Sbjct: 90  FLTEHAPLCRISSTDGEEYTIYSCIRGRLLEVNENILQNPELLKEKPSTEGYIAVVLPKF 149

Query: 215 ADWLKVKESLLSLEQYKRL 232
            +   V E LLS ++Y+ +
Sbjct: 150 EESKTVTEGLLSQQEYEEI 168

[Close]

BLAST of HG10013928 vs. ExPASy TrEMBL
Match: A0A1S4E5T9 (Actin-binding transcription modulator OS=Cucumis melo OX=3656 GN=LOC103503860 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 7.5e-103
Identity = 201/237 (84.81%), Postives = 212/237 (89.45%), Query Frame = 0


Query: 1   MEHGETSNNVNVTVRNSPQP--PPLEEQEQQQLTEPLPKSFQEDEQDEELRKLLIPDVRD 60
           MEHG+T+N+V+VTV++S  P  PPLE+QE QQL EPLPKSFQEDEQDEELRKLL PDVRD
Sbjct: 1   MEHGDTNNDVHVTVQSSSPPPLPPLEKQELQQLAEPLPKSFQEDEQDEELRKLLTPDVRD 60

Query: 61  LPLAPPSAVETNFVSYFAPGTFAVPYLFQIHNGDFIKEGHDQYVYRHANGLCVIGLAATH 120
           LPL PPSAVETNFVSYFAP              DFIKEGHDQYVYRHANGLCVIGLAATH
Sbjct: 61  LPLVPPSAVETNFVSYFAP--------------DFIKEGHDQYVYRHANGLCVIGLAATH 120

Query: 121 IAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVCTKEASYIVRCSVK 180
           IAFKD GGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKV TK+ASYIVRCSVK
Sbjct: 121 IAFKDGGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVYTKDASYIVRCSVK 180

Query: 181 GSLLEVNDRLIKQPELLNTVAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH 236
           GSLLEVNDRLIKQPELLNTV HREGYIAIVMPKAADWLKVKESLLSLE+YKRLRE++
Sbjct: 181 GSLLEVNDRLIKQPELLNTVPHREGYIAIVMPKAADWLKVKESLLSLEEYKRLRELN 223

[Close]

BLAST of HG10013928 vs. ExPASy TrEMBL
Match: A0A5D3E6L9 (Actin-binding transcription modulator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007830 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 7.5e-103
Identity = 201/237 (84.81%), Postives = 212/237 (89.45%), Query Frame = 0


Query: 1   MEHGETSNNVNVTVRNSPQP--PPLEEQEQQQLTEPLPKSFQEDEQDEELRKLLIPDVRD 60
           MEHG+T+N+V+VTV++S  P  PPLE+QE QQL EPLPKSFQEDEQDEELRKLL PDVRD
Sbjct: 1   MEHGDTNNDVHVTVQSSSPPPLPPLEKQELQQLAEPLPKSFQEDEQDEELRKLLTPDVRD 60

Query: 61  LPLAPPSAVETNFVSYFAPGTFAVPYLFQIHNGDFIKEGHDQYVYRHANGLCVIGLAATH 120
           LPL PPSAVETNFVSYFAP              DFIKEGHDQYVYRHANGLCVIGLAATH
Sbjct: 61  LPLVPPSAVETNFVSYFAP--------------DFIKEGHDQYVYRHANGLCVIGLAATH 120

Query: 121 IAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVCTKEASYIVRCSVK 180
           IAFKD GGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKV TK+ASYIVRCSVK
Sbjct: 121 IAFKDGGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVYTKDASYIVRCSVK 180

Query: 181 GSLLEVNDRLIKQPELLNTVAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH 236
           GSLLEVNDRLIKQPELLNTV HREGYIAIVMPKAADWLKVKESLLSLE+YKRLRE++
Sbjct: 181 GSLLEVNDRLIKQPELLNTVPHREGYIAIVMPKAADWLKVKESLLSLEEYKRLRELN 223

[Close]

BLAST of HG10013928 vs. ExPASy TrEMBL
Match: A0A5A7VCI3 (Actin-binding transcription modulator OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001340 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 8.3e-102
Identity = 200/237 (84.39%), Postives = 211/237 (89.03%), Query Frame = 0


Query: 1   MEHGETSNNVNVTVRNSPQP--PPLEEQEQQQLTEPLPKSFQEDEQDEELRKLLIPDVRD 60
           MEHG+T+N+V+VTV++S  P  PPLE+QE QQL EPL KSFQEDEQDEELRKLL PDVRD
Sbjct: 1   MEHGDTNNDVHVTVQSSSPPPLPPLEKQELQQLAEPLRKSFQEDEQDEELRKLLTPDVRD 60

Query: 61  LPLAPPSAVETNFVSYFAPGTFAVPYLFQIHNGDFIKEGHDQYVYRHANGLCVIGLAATH 120
           LPL PPSAVETNFVSYFAP              DFIKEGHDQYVYRHANGLCVIGLAATH
Sbjct: 61  LPLVPPSAVETNFVSYFAP--------------DFIKEGHDQYVYRHANGLCVIGLAATH 120

Query: 121 IAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVCTKEASYIVRCSVK 180
           IAFKD GGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKV TK+ASYIVRCSVK
Sbjct: 121 IAFKDGGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVYTKDASYIVRCSVK 180

Query: 181 GSLLEVNDRLIKQPELLNTVAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH 236
           GSLLEVNDRLIKQPELLNTV HREGYIAIVMPKAADWLKVKESLLSLE+YKRLRE++
Sbjct: 181 GSLLEVNDRLIKQPELLNTVPHREGYIAIVMPKAADWLKVKESLLSLEEYKRLRELN 223

[Close]

BLAST of HG10013928 vs. ExPASy TrEMBL
Match: A0A0A0LDM0 (Actin-binding transcription modulator OS=Cucumis sativus OX=3659 GN=Csa_3G874330 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.2e-101
Identity = 199/237 (83.97%), Postives = 210/237 (88.61%), Query Frame = 0


Query: 1   MEHGETSNNVNVTVRN-SPQ-PPPLEEQEQQQLTEPLPKSFQEDEQDEELRKLLIPDVRD 60
           MEHGET N+V++TV+N SP  PPPLE  E QQL EPLPKSFQEDEQDEELRKLL PDVRD
Sbjct: 1   MEHGETDNDVHMTVQNPSPSPPPPLENHELQQLAEPLPKSFQEDEQDEELRKLLTPDVRD 60

Query: 61  LPLAPPSAVETNFVSYFAPGTFAVPYLFQIHNGDFIKEGHDQYVYRHANGLCVIGLAATH 120
           LPL PPSAVETNFVSYFAP              DFIKEGHDQYVYRHANGLCV+GLAATH
Sbjct: 61  LPLVPPSAVETNFVSYFAP--------------DFIKEGHDQYVYRHANGLCVVGLAATH 120

Query: 121 IAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVCTKEASYIVRCSVK 180
           IAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKV TK+ASYIVRCSVK
Sbjct: 121 IAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVYTKDASYIVRCSVK 180

Query: 181 GSLLEVNDRLIKQPELLNTVAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH 236
           GSLLEVNDRLIKQPELLNT+ HREGYIAIVMPK ADWLKVKESLLSLE++KRLRE++
Sbjct: 181 GSLLEVNDRLIKQPELLNTLPHREGYIAIVMPKPADWLKVKESLLSLEEHKRLRELN 223

[Close]

BLAST of HG10013928 vs. ExPASy TrEMBL
Match: A0A6J1CMG0 (Actin-binding transcription modulator OS=Momordica charantia OX=3673 GN=LOC111012618 PE=3 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 4.3e-98
Identity = 189/234 (80.77%), Postives = 207/234 (88.46%), Query Frame = 0


Query: 1   MEHGETSNNVNVTVRNSPQPPPLEEQEQQQLTEPLPKSFQEDEQDEELRKLLIPDVRDLP 60
           MEHG T ++V  TVRN+PQP P EEQ+QQQ  +PLP+  QEDEQDEELR+LL+PDVRDLP
Sbjct: 1   MEHGGT-DDVQTTVRNTPQPQPPEEQQQQQPAQPLPRPSQEDEQDEELRRLLVPDVRDLP 60

Query: 61  LAPPSAVETNFVSYFAPGTFAVPYLFQIHNGDFIKEGHDQYVYRHANGLCVIGLAATHIA 120
           L+PPSAV+TNFVSYF P              DF+K+GHDQYVYRHANGLCVIGLA+THIA
Sbjct: 61  LSPPSAVDTNFVSYFVP--------------DFMKQGHDQYVYRHANGLCVIGLASTHIA 120

Query: 121 FKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVCTKEASYIVRCSVKGS 180
           FKDSGG+TAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKV TK+ASYIVRCSVKGS
Sbjct: 121 FKDSGGITAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVVTKDASYIVRCSVKGS 180

Query: 181 LLEVNDRLIKQPELLNTVAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREV 235
           LLEVNDRL+KQPELLNTVAHREGYIAIVMPK ADWLKVKESLLSLE+YKRLRE+
Sbjct: 181 LLEVNDRLMKQPELLNTVAHREGYIAIVMPKPADWLKVKESLLSLEEYKRLREM 219

[Close]

BLAST of HG10013928 vs. TAIR 10
Match: AT1G75980.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 258.8 bits (660), Expect = 4.1e-69
Identity = 133/211 (63.03%), Postives = 163/211 (77.25%), Query Frame = 0


Query: 24  EEQEQQQLTEPLPKSFQEDEQDEELRKLLIPDVRDLPLAPPSAVETNFVSYFAPGTFAVP 83
           ++Q++QQL      + QEDE+++ELRKLL+ D+ +LP++PPSA + NFVSYF        
Sbjct: 33  DDQQKQQL------ATQEDEEEDELRKLLLSDIGELPISPPSATQVNFVSYFIT------ 92

Query: 84  YLFQIHNGDFIKEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFK 143
                   DF K GHDQY+YRHANGLCVIGLA THIAFKD GG+T+VDFNVGKSDRS  K
Sbjct: 93  --------DFTKSGHDQYIYRHANGLCVIGLAPTHIAFKDEGGITSVDFNVGKSDRSVLK 152

Query: 144 VTGKRKKNAQFFEPNSALCKVCTKEASYIVRCSVKGSLLEVNDRLIKQPELLNTVAHREG 203
           V+GKRKKNA   E N+ALCKV T + +YIVRC VKGSLLEVN+RLIKQPELLN+ A REG
Sbjct: 153 VSGKRKKNALRSESNTALCKVSTAKDTYIVRCCVKGSLLEVNERLIKQPELLNSTADREG 212

Query: 204 YIAIVMPKAADWLKVKESLLSLEQYKRLREV 235
           YIAI+MP+ ADW K KESL++LE+YK  +E+
Sbjct: 213 YIAIIMPRPADWTKNKESLITLEEYKEKKEM 223

The following BLAST results are available for this feature:

BLAST of HG10013928 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896120.1	3.1e-111	90.21	protein Abitram [Benincasa hispida] >XP_038896121.1 protein Abitram [Benincasa h...	[more]
XP_008466465.1	1.5e-102	84.81	PREDICTED: protein Simiate [Cucumis melo] >XP_016903582.1 PREDICTED: protein Sim...	[more]
KAA0063309.1	1.7e-101	84.39	protein Simiate [Cucumis melo var. makuwa]	[more]
XP_004136372.1	6.5e-101	83.97	protein Abitram [Cucumis sativus] >KGN60055.1 hypothetical protein Csa_001950 [C...	[more]
XP_022142526.1	8.8e-98	80.77	protein Simiate [Momordica charantia]	[more]

BLAST of HG10013928 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q80ZQ9	5.5e-18	31.02	Protein Abitram OS=Mus musculus OX=10090 GN=Abitram PE=1 SV=2	[more]
Q1LU93	1.6e-17	33.81	Protein Abitram OS=Danio rerio OX=7955 GN=abitram PE=2 SV=1	[more]
Q9NX38	4.6e-17	30.59	Protein Abitram OS=Homo sapiens OX=9606 GN=ABITRAM PE=1 SV=1	[more]
Q5RFS0	4.6e-17	30.59	Protein Abitram OS=Pongo abelii OX=9601 GN=ABITRAM PE=2 SV=1	[more]
Q28G67	6.1e-17	32.37	Protein Abitram OS=Xenopus tropicalis OX=8364 GN=abitram PE=2 SV=1	[more]

BLAST of HG10013928 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E5T9	7.5e-103	84.81	Actin-binding transcription modulator OS=Cucumis melo OX=3656 GN=LOC103503860 PE...	[more]
A0A5D3E6L9	7.5e-103	84.81	Actin-binding transcription modulator OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7VCI3	8.3e-102	84.39	Actin-binding transcription modulator OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0LDM0	3.2e-101	83.97	Actin-binding transcription modulator OS=Cucumis sativus OX=3659 GN=Csa_3G874330...	[more]
A0A6J1CMG0	4.3e-98	80.77	Actin-binding transcription modulator OS=Momordica charantia OX=3673 GN=LOC11101...	[more]

BLAST of HG10013928 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75980.1	4.1e-69	63.03	Single hybrid motif superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033753	Glycine cleavage system H-protein/Simiate	PFAM	PF01597	GCV_H	coord: 167..231 e-value: 6.7E-6 score: 26.0
None	No IPR available	GENE3D	2.40.50.100		coord: 93..233 e-value: 1.6E-14 score: 55.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
IPR039169	Protein Abitram	PANTHER	PTHR13651	UNCHARACTERIZED	coord: 38..233
IPR011053	Single hybrid motif	SUPERFAMILY	51230	Single hybrid motif	coord: 97..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013928.1	HG10013928.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus