HG10013885 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10013885
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein canopy-1-like isoform X1
LocationChr02: 5688404 .. 5691373 (-)
RNA-Seq ExpressionHG10013885
SyntenyHG10013885
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACATCGGTTGGATTCTAAAGGTCAGCGTAAGGGGAAGGTGATTGATTACAGGTAAAACATCAACCTCCCGATTTTCAGGATGCCCTTTTTTCCTTGGCATGTTTAGAATATTCTTATTATTATGTTTACTAAATGCAGTGGTGCTAGTAGATAGATGAACTGTTGAAATAGTTCAGTAGGAATATATGTTGGGCCGACATATGGGTTGACAAGTAGCTTGAAGGCTTGTAAAGAACCACGATGTTTGAAATTTATGAACCTAATGAAATAAGTTTGTCTATTCAAAGCTCAGTTGAAACTGATGAAGGTGAAATCTGTATTGTTAAAATGCCAAATAGTCAAACAATAACTAATATTTGATATTAATCAAACAGAACAGAGATTTTTGTTACCATATGAAGCAAAATTTTATTGATCAAAATCTTACTTTATTATTGAGATACAGACATATAGTTCAATTGATGATTTTAATTCGGTAAGTAGTTAGGATCTGTTTACACGGTAAGGTTATTAAAATTGATGATTCTTAGTTACATTTTCCCAATTAATCGTGTTTTTGTTACTGGGTTGCTTTTAAATAATGAATGAACAACATATTTGTAAACTGTAAACTTAAATTTCTGCAGGGTCAGTGAGCTTAGAGTTGTCGAACTCCTGGATGGGCTTTGTGAAAAGATGCAAGATTACACTATTGAGAAGGTACTTCTCTTTGAAATTATCCATTTGATCTTAGTTGGATTGGAATTTCTTACAGTCTGGAGGCTTATTTGTGAGATGATTGTGTCATCTGTTCTTGGTGCAGACAGGTTCAACTGGACAACAGTGGATCAAGGTGGATAACTGGGACAACCTGACAAGTATGTGGCGAATTTAAGCTTCTGTCTTTCAATGAGTTCCTACTCAATAAACCTATGTTTCTTTTGTTGTTGTCTTTATTTGTTTGTTTTTGTTTTTCTTCTTCTTCTTCTTCTATTTATTTTTATTTTATTTTATGTTATTATTATTTTTTCTATTGAAATTGTCGCTTGAAACTCTTACCTAAGTTGCTGAATGTTTCATAGCTAACTGTCATGCACTTGATACATAATGTAGTAAAGAAAAAGAAGCTGGTAACAAGAATCACAAGTGGCCTGGACTGAATTTATTTAAATCTTGGCAATACCCTATAGTTCACTTCCTTGTAGATGACTGATGTTTATAGCTTGCTACAATTACATATGAAATTATCTTTGTTTGTTTGTTTTAATGCAAACATTTAATTGTGTCGTTACAGATAAACAAGAAGCTCGGGCTTATTCTAAAGATATATCAACTTATTGTGGGAGGTGAGACTAATCTTGTGATGATTATTCAGCGACCATAATAATCCAGCTGATTCATTGATTTATGATTTTCTCAATCTAATGTTGTTGTTCATTAACGAAACAGATTATTGGAGGAAACAGAAGATGATGTAAGTTGACATGCTTTGCCTCATAAATGAATAATCTCTCTCTCTCTGTCTTTTTCCTCTGAATAGATCTAATCAATTTCTTGATATTGATGAACCTGCAGTTGGCAGAGTTGATTAAGAAAGGATCTGTCATGGCAGGTGATGTTAGCAAAGTCCTATGCCATGATTTGAGCAGGCATTGCAGCAAGGCGAGGTAATTTTTAATGTGCTGTTTGCAAGCCTCTGAAAAGTGCTTTTATATCAATTTCAAATGTTAATCTGACTATTAAGTTGATCTCGTGATGAAAATGTTCATTCCATACTGATTATAGTATTAATTATTAGGGTAAATATCAAAGTCGAAAAAAAAATTATTAGGGTAAATATCAATTTTTACTCTTAAACTTTAGGGATTGTATCAATTTAAAGTTTTAAACCATGAACTTTTGTAAGTGTATCAATTTACACCCTCCATTACGTTTCGTTTGGAAAAATCTCATGTGAAACTTATAATTGTATCAATTAAACTCCTAAACTTTCATAAATTAATAGATTTATACTCACACAAAATTTCCTTGGAAAGTGTCCATGCATTTACTCTCATCGTCCATTTTGTAAAACTGACATTTGAAGAAGTCTACTCACACTTGAGAATCAATGCATAGATGGTTTTCAAAAGTAATCGTAATGAATGGTCTAAATTGATTGATTTGTGAAAATTTAGAAGTTTAATTGACTCAAATTATAAGTTTCACAAGATAATGGTCAAAACGTAATCTGGAAGAGGGTGTAAATTGATACACTTACAAAAGTTGGTTTGAATTGGCACAAACCTCAAAGTTTAGGGGTATAAATTGATATTTGACCTAATTATTACCTTGCTTAACTGCTCCTTCAAAACAGCTTTCTTAGTCTGTTTTATAATGATTTCGTTTTTAGTTTTGTATTCATAAAATTTATGCTTGTTTACTTCAAATTTTCATACTATAGTTTTTACATTTCTGAAAGAAACATTTGAATTCTGTTTCAAATCTTAGAAAAATTAAAGTTTTTAAAAACTAATTTTTTTTTAGTTTTCAAGATTTGAATTGGTTTTTGGAAACAATGGTGGAAAATGGATAACAAAACAAGACTTGGTTTAATTTTCAAAACTAAAAATTAAATTGTTATCAAACTAGACCTTAACTAACAACCTCTTTCGATTATCGATTTCAAAACAATTATTGGTGGATGTAGAAGGCAGAACAACTGTTAATCAGTAGAACATCTAAAATGATGATATCAAACCTAAACTACTTCATGTAACAGTAACTTAGAAACTTATCCTACCTCTAGATGGCTCCTAGTTGTGATAGAGAGAGATTAAAACCATAGCCACCGTTTTAGATTGCCTTTCCCTTTTCGTTACTGGACCATTTTGGCAGAATTGTGATATCTTATAGTTTCAATACGTAATAAATAGTTGCCATCTTGTTTATTTGCAGCAGTGTTCAGCTGAATGACGAGGACGACGAAGCAGATGGAGAACTATGA

mRNA sequence

ATGAGACATCGGTTGGATTCTAAAGGTCAGCGTAAGGGGAAGGTGATTGATTACAGGGTCAGTGAGCTTAGAGTTGTCGAACTCCTGGATGGGCTTTGTGAAAAGATGCAAGATTACACTATTGAGAAGACAGGTTCAACTGGACAACAGTGGATCAAGGTGGATAACTGGGACAACCTGACAAATAAACAAGAAGCTCGGGCTTATTCTAAAGATATATCAACTTATTGTGGGAGATTATTGGAGGAAACAGAAGATGATTTGGCAGAGTTGATTAAGAAAGGATCTGTCATGGCAGGTGATGTTAGCAAAGTCCTATGCCATGATTTGAGCAGGCATTGCAGCAAGGCGAGCAGTGTTCAGCTGAATGACGAGGACGACGAAGCAGATGGAGAACTATGA

Coding sequence (CDS)

ATGAGACATCGGTTGGATTCTAAAGGTCAGCGTAAGGGGAAGGTGATTGATTACAGGGTCAGTGAGCTTAGAGTTGTCGAACTCCTGGATGGGCTTTGTGAAAAGATGCAAGATTACACTATTGAGAAGACAGGTTCAACTGGACAACAGTGGATCAAGGTGGATAACTGGGACAACCTGACAAATAAACAAGAAGCTCGGGCTTATTCTAAAGATATATCAACTTATTGTGGGAGATTATTGGAGGAAACAGAAGATGATTTGGCAGAGTTGATTAAGAAAGGATCTGTCATGGCAGGTGATGTTAGCAAAGTCCTATGCCATGATTTGAGCAGGCATTGCAGCAAGGCGAGCAGTGTTCAGCTGAATGACGAGGACGACGAAGCAGATGGAGAACTATGA

Protein sequence

MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNLTNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVMAGDVSKVLCHDLSRHCSKASSVQLNDEDDEADGEL
Homology
[Close]
BLAST of HG10013885 vs. NCBI nr
Match: XP_038896985.1 (protein canopy-1 isoform X1 [Benincasa hispida] >XP_038896986.1 protein canopy-1 isoform X1 [Benincasa hispida])

HSP 1 Score: 263.1 bits (671), Expect = 1.3e-66
Identity = 130/133 (97.74%), Postives = 130/133 (97.74%), Query Frame = 0 

Query: 1   MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL 60
           MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKT STGQQWIKVDNWDNL
Sbjct: 52  MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGQQWIKVDNWDNL 111

Query: 61  TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVMAGDVSKVLCHDLSRHCSKASSV 120
           TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSV AGDVSKVLCHDLSRHCSKASSV
Sbjct: 112 TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVRAGDVSKVLCHDLSRHCSKASSV 171

Query: 121 QLNDEDDEADGEL 134
            LNDEDDEADGEL
Sbjct: 172 HLNDEDDEADGEL 184

[Close]
BLAST of HG10013885 vs. NCBI nr
Match: XP_022975788.1 (protein canopy-1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 256.9 bits (655), Expect = 9.5e-65
Identity = 126/133 (94.74%), Postives = 130/133 (97.74%), Query Frame = 0 

Query: 1   MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL 60
           MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEK+ STG+QWIKVD+WDNL
Sbjct: 50  MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKSDSTGKQWIKVDDWDNL 109

Query: 61  TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVMAGDVSKVLCHDLSRHCSKASSV 120
           TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSV  GDVSKVLCHDLSRHCSKASSV
Sbjct: 110 TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVRPGDVSKVLCHDLSRHCSKASSV 169

Query: 121 QLNDEDDEADGEL 134
           QLND+DDEADGEL
Sbjct: 170 QLNDDDDEADGEL 182

[Close]
BLAST of HG10013885 vs. NCBI nr
Match: XP_038896987.1 (protein canopy-1 isoform X2 [Benincasa hispida] >XP_038896988.1 protein canopy-1 isoform X2 [Benincasa hispida])

HSP 1 Score: 256.9 bits (655), Expect = 9.5e-65
Identity = 129/133 (96.99%), Postives = 129/133 (96.99%), Query Frame = 0 

Query: 1   MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL 60
           MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKT STGQQWIKVDNWDNL
Sbjct: 52  MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGQQWIKVDNWDNL 111

Query: 61  TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVMAGDVSKVLCHDLSRHCSKASSV 120
           TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSV AGDVSKVLCHDLSRHCSKA SV
Sbjct: 112 TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVRAGDVSKVLCHDLSRHCSKA-SV 171

Query: 121 QLNDEDDEADGEL 134
            LNDEDDEADGEL
Sbjct: 172 HLNDEDDEADGEL 183

[Close]
BLAST of HG10013885 vs. NCBI nr
Match: XP_031739828.1 (protein canopy-1 isoform X1 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 2.1e-64
Identity = 127/134 (94.78%), Postives = 130/134 (97.01%), Query Frame = 0 

Query: 1   MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL 60
           MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGS GQQWIKVDNWDNL
Sbjct: 52  MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSAGQQWIKVDNWDNL 111

Query: 61  TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVMAGDVSKVLCHDLSRHCSKASSV 120
           TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSV  GDVSKVLCHDLS+HCSKASSV
Sbjct: 112 TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVSPGDVSKVLCHDLSKHCSKASSV 171

Query: 121 QLN-DEDDEADGEL 134
           QLN D+DDE+DGEL
Sbjct: 172 QLNDDDDDESDGEL 185

[Close]
BLAST of HG10013885 vs. NCBI nr
Match: XP_008452994.1 (PREDICTED: protein canopy-1 isoform X1 [Cucumis melo])

HSP 1 Score: 255.4 bits (651), Expect = 2.8e-64
Identity = 127/133 (95.49%), Postives = 129/133 (96.99%), Query Frame = 0 

Query: 1   MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL 60
           MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL
Sbjct: 52  MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL 111

Query: 61  TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVMAGDVSKVLCHDLSRHCSKASSV 120
           TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSV  GDVSKVLCHDLSRHC+ ASSV
Sbjct: 112 TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVTPGDVSKVLCHDLSRHCN-ASSV 171

Query: 121 QLNDEDDEADGEL 134
           QLND+DDE DGEL
Sbjct: 172 QLNDDDDETDGEL 183

[Close]
BLAST of HG10013885 vs. ExPASy TrEMBL
Match: A0A6J1IKA3 (protein canopy-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476381 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.6e-65
Identity = 126/133 (94.74%), Postives = 130/133 (97.74%), Query Frame = 0 

Query: 1   MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL 60
           MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEK+ STG+QWIKVD+WDNL
Sbjct: 50  MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKSDSTGKQWIKVDDWDNL 109

Query: 61  TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVMAGDVSKVLCHDLSRHCSKASSV 120
           TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSV  GDVSKVLCHDLSRHCSKASSV
Sbjct: 110 TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVRPGDVSKVLCHDLSRHCSKASSV 169

Query: 121 QLNDEDDEADGEL 134
           QLND+DDEADGEL
Sbjct: 170 QLNDDDDEADGEL 182

[Close]
BLAST of HG10013885 vs. ExPASy TrEMBL
Match: A0A6J1FE32 (protein canopy-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443141 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64
Identity = 126/133 (94.74%), Postives = 129/133 (96.99%), Query Frame = 0 

Query: 1   MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL 60
           MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKT STG+QWIKVD+WDNL
Sbjct: 50  MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNL 109

Query: 61  TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVMAGDVSKVLCHDLSRHCSKASSV 120
           TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSV  G VSKVLCHDLSRHCSKASSV
Sbjct: 110 TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASSV 169

Query: 121 QLNDEDDEADGEL 134
           QLND+DDEADGEL
Sbjct: 170 QLNDDDDEADGEL 182

[Close]
BLAST of HG10013885 vs. ExPASy TrEMBL
Match: A0A1S3BWB0 (protein canopy-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493830 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64
Identity = 127/133 (95.49%), Postives = 129/133 (96.99%), Query Frame = 0 

Query: 1   MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL 60
           MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL
Sbjct: 52  MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL 111

Query: 61  TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVMAGDVSKVLCHDLSRHCSKASSV 120
           TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSV  GDVSKVLCHDLSRHC+ ASSV
Sbjct: 112 TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVTPGDVSKVLCHDLSRHCN-ASSV 171

Query: 121 QLNDEDDEADGEL 134
           QLND+DDE DGEL
Sbjct: 172 QLNDDDDETDGEL 183

[Close]
BLAST of HG10013885 vs. ExPASy TrEMBL
Match: A0A6J1CJM8 (protein seele isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011916 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.0e-64
Identity = 124/133 (93.23%), Postives = 129/133 (96.99%), Query Frame = 0 

Query: 1   MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL 60
           MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKT S+GQQWIKVD+WDNL
Sbjct: 50  MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTASSGQQWIKVDSWDNL 109

Query: 61  TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVMAGDVSKVLCHDLSRHCSKASSV 120
           TN+QEARAYSKDISTYCGRLLEETEDDLAELIKKGSV  GDVSKVLCHDLSRHCS ASSV
Sbjct: 110 TNQQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVREGDVSKVLCHDLSRHCSNASSV 169

Query: 121 QLNDEDDEADGEL 134
           Q+ND+DDEADGEL
Sbjct: 170 QVNDDDDEADGEL 182

[Close]
BLAST of HG10013885 vs. ExPASy TrEMBL
Match: A0A1S3BUL2 (protein canopy-1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493830 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.1e-63
Identity = 125/133 (93.98%), Postives = 128/133 (96.24%), Query Frame = 0 

Query: 1   MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL 60
           MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL
Sbjct: 52  MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL 111

Query: 61  TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVMAGDVSKVLCHDLSRHCSKASSV 120
           TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSV  GDVSKVLCHDLSRHC+  +SV
Sbjct: 112 TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVTPGDVSKVLCHDLSRHCN--ASV 171

Query: 121 QLNDEDDEADGEL 134
           QLND+DDE DGEL
Sbjct: 172 QLNDDDDETDGEL 182

[Close]
BLAST of HG10013885 vs. TAIR 10
Match: AT1G42480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3456 (InterPro:IPR021852); Has 177 Blast hits to 177 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 184.9 bits (468), Expect = 4.3e-47
Identity = 86/133 (64.66%), Postives = 110/133 (82.71%), Query Frame = 0 

Query: 1   MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL 60
           MR+RL+SKGQR+GKVIDYR+S+LRVV+LLDGLC++MQDYT++K     +QW+KV N+DNL
Sbjct: 50  MRNRLNSKGQREGKVIDYRISDLRVVDLLDGLCDRMQDYTLQKVEPKNRQWVKVGNFDNL 109

Query: 61  TNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVMAGDVSKVLCHDLSRHCSKASSV 120
           TNKQEA+A++ DISTYCGRLLEETED+L E+IK GS+ AG+V KVLC  LS HC ++S  
Sbjct: 110 TNKQEAKAHANDISTYCGRLLEETEDELGEVIKNGSLKAGEVRKVLCQTLSNHCRQSSET 169

Query: 121 QLNDEDDEADGEL 134
              DE+D+   EL
Sbjct: 170 DSEDEEDDDADEL 182

[Close]
BLAST of HG10013885 vs. TAIR 10
Match: AT1G42480.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3456 (InterPro:IPR021852); Has 152 Blast hits to 152 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 154.1 bits (388), Expect = 8.1e-38
Identity = 74/128 (57.81%), Postives = 98/128 (76.56%), Query Frame = 0 

Query: 7   SKGQRKGKVIDYRV-SELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNLTNKQE 66
           +KG+   ++   RV S+LRVV+LLDGLC++MQDYT++K     +QW+KV N+DNLTNKQE
Sbjct: 55  TKGKESDRLTLLRVISDLRVVDLLDGLCDRMQDYTLQKVEPKNRQWVKVGNFDNLTNKQE 114

Query: 67  ARAYSKDISTYCGRLLEETEDDLAELIKKGSVMAGDVSKVLCHDLSRHCSKASSVQLNDE 126
           A+A++ DISTYCGRLLEETED+L E+IK GS+ AG+V KVLC  LS HC ++S     DE
Sbjct: 115 AKAHANDISTYCGRLLEETEDELGEVIKNGSLKAGEVRKVLCQTLSNHCRQSSETDSEDE 174

Query: 127 DDEADGEL 134
           +D+   EL
Sbjct: 175 EDDDADEL 182

[Close]
BLAST of HG10013885 vs. TAIR 10
Match: AT1G42480.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3456 (InterPro:IPR021852); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 96.7 bits (239), Expect = 1.5e-20
Identity = 42/62 (67.74%), Postives = 56/62 (90.32%), Query Frame = 0 

Query: 1   MRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNL 60
           MR+RL+SKGQR+GKVIDYR+S+LRVV+LLDGLC++MQDYT++K     +QW+KV N+DNL
Sbjct: 50  MRNRLNSKGQREGKVIDYRISDLRVVDLLDGLCDRMQDYTLQKVEPKNRQWVKVGNFDNL 109

Query: 61  TN 63
           T+
Sbjct: 110 TS 111

The following BLAST results are available for this feature:
BLAST of HG10013885 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038896985.11.3e-6697.74protein canopy-1 isoform X1 [Benincasa hispida] >XP_038896986.1 protein canopy-1... [more]
XP_022975788.19.5e-6594.74protein canopy-1-like isoform X1 [Cucurbita maxima][more]
XP_038896987.19.5e-6596.99protein canopy-1 isoform X2 [Benincasa hispida] >XP_038896988.1 protein canopy-1... [more]
XP_031739828.12.1e-6494.78protein canopy-1 isoform X1 [Cucumis sativus][more]
XP_008452994.12.8e-6495.49PREDICTED: protein canopy-1 isoform X1 [Cucumis melo][more]
BLAST of HG10013885 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of HG10013885 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IKA34.6e-6594.74protein canopy-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476381 PE=... [more]
A0A6J1FE321.3e-6494.74protein canopy-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443141 P... [more]
A0A1S3BWB01.3e-6495.49protein canopy-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493830 PE=4 SV=1[more]
A0A6J1CJM83.0e-6493.23protein seele isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011916 PE=4 SV=... [more]
A0A1S3BUL21.1e-6393.98protein canopy-1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493830 PE=4 SV=1[more]
BLAST of HG10013885 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G42480.14.3e-4764.66unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G42480.38.1e-3857.81unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G42480.21.5e-2067.74unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021852Domain of unknown function DUF3456PFAMPF11938DUF3456coord: 2..114
e-value: 7.9E-27
score: 94.6
NoneNo IPR availablePANTHERPTHR31775OS02G0117200 PROTEINcoord: 1..126
NoneNo IPR availablePANTHERPTHR31775:SF17OS02G0117200 PROTEINcoord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10013885.1HG10013885.1mRNA