Homology
BLAST of HG10013839 vs. NCBI nr
Match:
XP_038899825.1 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Benincasa hispida])
HSP 1 Score: 1119.4 bits (2894), Expect = 0.0e+00
Identity = 556/567 (98.06%), Postives = 563/567 (99.29%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITNP PETTRRGCGFFSHIPNLHKLSL+KGFSKVLASTQITISPKDTIFT
Sbjct: 1 MATLLNTVSPITNPLPETTRRGCGFFSHIPNLHKLSLSKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWRTGKVDQKSRELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKLRKAIKVM 120
LPNWRT K DQKSRELRLNDAFFHLEF+VEKGQKPDVFQATQLLYDLCKACK+RKAIKVM
Sbjct: 61 LPNWRTAKGDQKSRELRLNDAFFHLEFLVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIELLDEIIAKGGKPNLVSY 240
GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAI+LLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
D+RSPSIVTYNILIGSLTL GRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL
Sbjct: 301 DERSPSIVTYNILIGSLTLSGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQM+YRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYRPD 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNY+PD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR
Sbjct: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
Query: 541 ELQLRDVISQSTVERLVMQYDLNELPL 568
ELQLRDVISQSTVERLVMQYDLNELPL
Sbjct: 541 ELQLRDVISQSTVERLVMQYDLNELPL 567
BLAST of HG10013839 vs. NCBI nr
Match:
XP_022141778.1 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Momordica charantia])
HSP 1 Score: 1088.6 bits (2814), Expect = 0.0e+00
Identity = 536/567 (94.53%), Postives = 555/567 (97.88%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPI NPSPET+RRGCGFFSHIPNLHKLSLNKGFSKVLAST ITISPKDTIFT
Sbjct: 1 MATLLNTVSPIANPSPETSRRGCGFFSHIPNLHKLSLNKGFSKVLASTHITISPKDTIFT 60
Query: 61 LPNWRTGKVDQKSRELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKLRKAIKVM 120
LPNWRTGKVDQKSR+LRLNDAF HLEFMV KGQKPDVFQATQLLYDLCKA K+RKAIKVM
Sbjct: 61 LPNWRTGKVDQKSRDLRLNDAFLHLEFMVRKGQKPDVFQATQLLYDLCKASKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVS LCK+GNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSCLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIELLDEIIAKGGKPNLVSY 240
GNL+QSLQLLDRLI KGLVPNAYTYSFLLEAAYKERGADEAI+LLDEIIAKGGKPNLVSY
Sbjct: 181 GNLSQSLQLLDRLIHKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVS NILLRSLCYEGRWEEAN LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSCNILLRSLCYEGRWEEANELLAEMDG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
DDR+PSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL
Sbjct: 301 DDRAPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQM+YRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGN+Q SSTQEFYK+V+TS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNRQQSSTQEFYKMVVTS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYRPD 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEEN Y+PD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENCYKPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYN+LILGCCKS+RTDLALEVFE+MVDKGYLPNETTYTILVEGI+HEKEIDLA KVL+
Sbjct: 481 TENYNALILGCCKSQRTDLALEVFEVMVDKGYLPNETTYTILVEGIIHEKEIDLAAKVLK 540
Query: 541 ELQLRDVISQSTVERLVMQYDLNELPL 568
ELQLRDVISQSTV+RLVMQYDLN+LPL
Sbjct: 541 ELQLRDVISQSTVDRLVMQYDLNDLPL 567
BLAST of HG10013839 vs. NCBI nr
Match:
XP_008444287.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucumis melo] >ADN33755.1 pentatricopeptide repeat-containing protein [Cucumis melo subsp. melo] >KAA0052323.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK01883.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 538/567 (94.89%), Postives = 556/567 (98.06%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITN SPETTRRGCGFFSHIPNL KLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1 MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWRTGKVDQKSRELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKLRKAIKVM 120
LPNW+TGKV+QKS+ELRL DAFFHLEFMVEKGQKPDVFQATQLLYDLCKACK+RKAIKVM
Sbjct: 61 LPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVSSLC+KGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIELLDEIIAKGGKPNLVSY 240
GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA +LLDEIIAKGG+PNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDAI+LFRELPSKGFSPNVVSYNILLRSLC EGRWEEANVLLAEM+G
Sbjct: 241 NVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
D+RSPS VTYNILIGSL LHGRTEHALEVLEEMIRARFKPTASSYNPIIA LCKD K+DL
Sbjct: 301 DERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQM+YRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYRPD 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGML+EAIEIFSVMEENN +PD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYNSLILGCCKSRRTDLAL+VFEIMV KGYLPNETTYTILVEGI+HEKE+DLATKVLR
Sbjct: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLR 540
Query: 541 ELQLRDVISQSTVERLVMQYDLNELPL 568
ELQLRDVISQST+ERLVMQYDLNELPL
Sbjct: 541 ELQLRDVISQSTLERLVMQYDLNELPL 566
BLAST of HG10013839 vs. NCBI nr
Match:
XP_011653982.1 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucumis sativus] >KGN54942.1 hypothetical protein Csa_012601 [Cucumis sativus])
HSP 1 Score: 1080.1 bits (2792), Expect = 0.0e+00
Identity = 536/567 (94.53%), Postives = 554/567 (97.71%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITNPSPETTRRGCGFFSHIPN+ KLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWRTGKVDQKSRELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKLRKAIKVM 120
LPNW+ GK+DQKS+ELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCK CK+RKAIKVM
Sbjct: 61 LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDA+SYTFLVSSLC+KGNVGYAMQLVDKMEEYGYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIELLDEIIAKGGKPNLVSY 240
GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA +LLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDA+QLFRELPSKGFSPNVVSYNILLRSLC EGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
D+RSPS VTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL
Sbjct: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQM+YRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQH STQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYRPD 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGML+EAIEIFSVMEE N + D
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYNSLILGCCKSRRTDLAL+VFEIMV KGYL NETTYTILVEGI+HEKE+DLAT+VLR
Sbjct: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLR 540
Query: 541 ELQLRDVISQSTVERLVMQYDLNELPL 568
ELQLRDVI+QSTVERLVMQYDLNELPL
Sbjct: 541 ELQLRDVINQSTVERLVMQYDLNELPL 566
BLAST of HG10013839 vs. NCBI nr
Match:
KAG6607968.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037481.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1067.0 bits (2758), Expect = 5.6e-308
Identity = 527/567 (92.95%), Postives = 547/567 (96.47%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITNPSPETTRRG GFFSHIPNLHKLSL+KGFSKVLASTQ+TISPKDTIFT
Sbjct: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60
Query: 61 LPNWRTGKVDQKSRELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKLRKAIKVM 120
LPNWR GK DQK+RE RLNDAF +LE++V KGQKPDVFQATQLLYDLCKA KLR+AIKVM
Sbjct: 61 LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVSSLCK+GNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIELLDEIIAKGGKPNLVSY 240
GNLT SLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA++LLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRT+DAIQLFRELPSKGF+PNVVSYNILLRSLCYEGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
DDR+PS VTYN LIGSL HGRTEHALEVLEEMIRARFKPTASSYNPIIARLC+D+KVDL
Sbjct: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQMIYRHCNPNEGTYNAIATLCE GMVQEAFSI+QSLGNKQH STQEFYK VITS
Sbjct: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYRPD 480
LCRKGNTY AFQLLYEMTKYGFTPDSF YSSLIRGLCMEGMLDEAIEIFSVMEENNY+PD
Sbjct: 421 LCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYNSLI GCCKSRRTDLALEVFE MV+KGYLPNETTYT LVEGIVHEK+IDLATKVLR
Sbjct: 481 TENYNSLIFGCCKSRRTDLALEVFETMVNKGYLPNETTYTTLVEGIVHEKQIDLATKVLR 540
Query: 541 ELQLRDVISQSTVERLVMQYDLNELPL 568
ELQL+DVISQSTVERLVMQYDLNELPL
Sbjct: 541 ELQLKDVISQSTVERLVMQYDLNELPL 567
BLAST of HG10013839 vs. ExPASy Swiss-Prot
Match:
A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)
HSP 1 Score: 762.3 bits (1967), Expect = 3.9e-219
Identity = 383/577 (66.38%), Postives = 473/577 (81.98%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPN--LHKLSLNKGFSKVLASTQITISPKDTI 60
M+TLLN+V + +P + R+ GF SHIP+ LH S++KG ++VLASTQIT+SPKD+
Sbjct: 1 MSTLLNSVLSMASPE-SSPRKAVGFVSHIPSGFLHFSSVSKGVARVLASTQITLSPKDSA 60
Query: 61 FTL------PNWRTGKV--DQKSRELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKA 120
FT+ P+ +G D +S E L+D+F HLE +V G KP+V +TQLLYDLCKA
Sbjct: 61 FTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKA 120
Query: 121 CKLRKAIKVMEMMIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTY 180
+L+KAI+V+E+M+ SGIIPDAS+YT+LV+ LCK+GNVGYAMQLV+KME++GYP+NTVTY
Sbjct: 121 NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTY 180
Query: 181 NSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIELLDEIIA 240
N+LVRGLCM G+L QSLQ ++RL+QKGL PNA+TYSFLLEAAYKERG DEA++LLDEII
Sbjct: 181 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 240
Query: 241 KGGKPNLVSYNVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEE 300
KGG+PNLVSYNVLLTG CKEGRT+DA+ LFRELP+KGF NVVSYNILLR LC +GRWEE
Sbjct: 241 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 300
Query: 301 ANVLLAEMDGDDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRA--RFKPTASSYNPI 360
AN LLAEMDG DR+PS+VTYNILI SL HGRTE AL+VL+EM + +F+ TA+SYNP+
Sbjct: 301 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV 360
Query: 361 IARLCKDRKVDLVVKCLDQMIYRHCNPNEGTYNAIATLCE-EGMVQEAFSIIQSLGNKQH 420
IARLCK+ KVDLVVKCLD+MIYR C PNEGTYNAI +LCE VQEAF IIQSL NKQ
Sbjct: 361 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQK 420
Query: 421 SSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIE 480
T +FYK VITSLCRKGNT+ AFQLLYEMT+ GF PD+ TYS+LIRGLC+EGM A+E
Sbjct: 421 CCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAME 480
Query: 481 IFSVMEEN-NYRPDTENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGI 540
+ S+MEE+ N +P +N+N++ILG CK RRTDLA+EVFE+MV+K +PNETTY ILVEGI
Sbjct: 481 VLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 540
Query: 541 VHEKEIDLATKVLRELQLRDVISQSTVERLVMQYDLN 564
HE E++LA +VL EL+LR VI Q+ V+R+VMQ++L+
Sbjct: 541 AHEDELELAKEVLDELRLRKVIGQNAVDRIVMQFNLD 576
BLAST of HG10013839 vs. ExPASy Swiss-Prot
Match:
Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 392.9 bits (1008), Expect = 6.2e-108
Identity = 196/487 (40.25%), Postives = 306/487 (62.83%), Query Frame = 0
Query: 71 QKSRELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKLRKAIKVMEMMIGSGIIP 130
Q R L + F LE MV G PD+ T L+ C+ K RKA K++E++ GSG +P
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 131 DASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLL 190
D +Y ++S CK G + A+ ++D+M + VTYN+++R LC G L Q++++L
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVL 230
Query: 191 DRLIQKGLVPNAYTYSFLLEAAYKERGADEAIELLDEIIAKGGKPNLVSYNVLLTGLCKE 250
DR++Q+ P+ TY+ L+EA ++ G A++LLDE+ +G P++V+YNVL+ G+CKE
Sbjct: 231 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 290
Query: 251 GRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRSPSIVTY 310
GR ++AI+ ++PS G PNV+++NI+LRS+C GRW +A LLA+M SPS+VT+
Sbjct: 291 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 350
Query: 311 NILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMIY 370
NILI L G A+++LE+M + +P + SYNP++ CK++K+D ++ L++M+
Sbjct: 351 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 410
Query: 371 RHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYP 430
R C P+ TYN + T LC++G V++A I+ L +K S Y VI L + G T
Sbjct: 411 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 470
Query: 431 AFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYRPDTENYNSLIL 490
A +LL EM PD+ TYSSL+ GL EG +DEAI+ F E RP+ +NS++L
Sbjct: 471 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 530
Query: 491 GCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLRELQLRDVIS 550
G CKSR+TD A++ M+++G PNET+YTIL+EG+ +E A ++L EL + ++
Sbjct: 531 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMK 590
Query: 551 QSTVERL 557
+S+ E++
Sbjct: 591 KSSAEQV 594
BLAST of HG10013839 vs. ExPASy Swiss-Prot
Match:
Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)
HSP 1 Score: 342.4 bits (877), Expect = 9.6e-93
Identity = 178/479 (37.16%), Postives = 276/479 (57.62%), Query Frame = 0
Query: 85 LEFMVEKGQKPDVFQATQLLYDLCKACKLRKAIKVMEMMIGSGIIPDASSYTFLVSSLCK 144
LE MV KG PDV T+L+ + KA++VME++ G PD +Y L++ CK
Sbjct: 112 LETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCK 171
Query: 145 KGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
+ A +++D+M + +TVTYN ++ LC G L +L++L++L+ P T
Sbjct: 172 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 231
Query: 205 YSFLLEAAYKERGADEAIELLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIQLFRELP 264
Y+ L+EA E G DEA++L+DE++++G KP++ +YN ++ G+CKEG + A ++ R L
Sbjct: 232 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 291
Query: 265 SKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRSPSIVTYNILIGSLTLHGRTE 324
KG P+V+SYNILLR+L +G+WEE L+ +M + P++VTY+ILI +L G+ E
Sbjct: 292 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 351
Query: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMIYRHCNPNEGTYNAI- 384
A+ +L+ M P A SY+P+IA C++ ++D+ ++ L+ MI C P+ YN +
Sbjct: 352 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 411
Query: 385 ATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFT 444
ATLC+ G +A I LG S Y + ++L G+ A ++ EM G
Sbjct: 412 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 471
Query: 445 PDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYRPDTENYNSLILGCCKSRRTDLALEV 504
PD TY+S+I LC EGM+DEA E+ M + P YN ++LG CK+ R + A+ V
Sbjct: 472 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 531
Query: 505 FEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLRELQLRDVISQSTVERLVMQYDL 563
E MV G PNETTYT+L+EGI A ++ +L D IS+ + +RL + L
Sbjct: 532 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFPL 589
BLAST of HG10013839 vs. ExPASy Swiss-Prot
Match:
Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)
HSP 1 Score: 260.4 bits (664), Expect = 4.8e-68
Identity = 135/454 (29.74%), Postives = 239/454 (52.64%), Query Frame = 0
Query: 91 KGQKPDVFQATQLLYDLCKACKLRKAIKVMEMMIGSGIIPDASSYTFLVSSLCKKGNVGY 150
KG +++ + ++ C+ KL A M +I G PD +++ L++ LC +G V
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 151 AMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLE 210
A++LVD+M E G+ +T N+LV GLC++G ++ ++ L+DR+++ G PN TY +L+
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 211 AAYKERGADEAIELLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIQLFRELPSKGFSP 270
K A+ELL ++ + K + V Y++++ GLCK+G ++A LF E+ KGF
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 271 NVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRSPSIVTYNILIGSLTLHGRTEHALEVL 330
+++ Y L+R CY GRW++ LL +M +P +V ++ LI G+ A E+
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 331 EEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMIYRHCNPNEGTYNAIAT-LCEE 390
+EMI+ P +Y +I CK+ ++D LD M+ + C PN T+N + C+
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 391 GMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTY 450
++ + + + + + + Y +I C G A +L EM PD +Y
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 451 SSLIRGLCMEGMLDEAIEIFSVMEENNYRPDTENYNSLILGCCKSRRTDLALEVFEIMVD 510
L+ GLC G ++A+EIF +E++ D YN +I G C + + D A ++F +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 511 KGYLPNETTYTILVEGIVHEKEIDLATKVLRELQ 544
KG P+ TY I++ G+ + + A + R+++
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
BLAST of HG10013839 vs. ExPASy Swiss-Prot
Match:
Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)
HSP 1 Score: 258.5 bits (659), Expect = 1.8e-67
Identity = 135/454 (29.74%), Postives = 240/454 (52.86%), Query Frame = 0
Query: 91 KGQKPDVFQATQLLYDLCKACKLRKAIKVMEMMIGSGIIPDASSYTFLVSSLCKKGNVGY 150
KG +++ + ++ C+ KL A M +I G P+ +++ L++ LC +G V
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE 176
Query: 151 AMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLE 210
A++LVD+M E G+ + +T N+LV GLC+ G +++ L+D++++ G PNA TY +L
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 211 AAYKERGADEAIELLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIQLFRELPSKGFSP 270
K A+ELL ++ + K + V Y++++ GLCK G ++A LF E+ KG +
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 271 NVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRSPSIVTYNILIGSLTLHGRTEHALEVL 330
N+++YNIL+ C GRW++ LL +M +P++VT+++LI S G+ A E+
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 331 EEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMIYRHCNPNEGTYNAIAT-LCEE 390
+EMI P +Y +I CK+ +D + +D M+ + C+PN T+N + C+
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 391 GMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTY 450
+ + + + + + + Y +I C G A +L EM P+ TY
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 451 SSLIRGLCMEGMLDEAIEIFSVMEENNYRPDTENYNSLILGCCKSRRTDLALEVFEIMVD 510
L+ GLC G ++A+EIF +E++ D YN +I G C + + D A ++F +
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 511 KGYLPNETTYTILVEGIVHEKEIDLATKVLRELQ 544
KG P TY I++ G+ + + A + R+++
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
BLAST of HG10013839 vs. ExPASy TrEMBL
Match:
A0A6J1CLJ3 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012056 PE=4 SV=1)
HSP 1 Score: 1088.6 bits (2814), Expect = 0.0e+00
Identity = 536/567 (94.53%), Postives = 555/567 (97.88%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPI NPSPET+RRGCGFFSHIPNLHKLSLNKGFSKVLAST ITISPKDTIFT
Sbjct: 1 MATLLNTVSPIANPSPETSRRGCGFFSHIPNLHKLSLNKGFSKVLASTHITISPKDTIFT 60
Query: 61 LPNWRTGKVDQKSRELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKLRKAIKVM 120
LPNWRTGKVDQKSR+LRLNDAF HLEFMV KGQKPDVFQATQLLYDLCKA K+RKAIKVM
Sbjct: 61 LPNWRTGKVDQKSRDLRLNDAFLHLEFMVRKGQKPDVFQATQLLYDLCKASKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVS LCK+GNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSCLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIELLDEIIAKGGKPNLVSY 240
GNL+QSLQLLDRLI KGLVPNAYTYSFLLEAAYKERGADEAI+LLDEIIAKGGKPNLVSY
Sbjct: 181 GNLSQSLQLLDRLIHKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVS NILLRSLCYEGRWEEAN LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSCNILLRSLCYEGRWEEANELLAEMDG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
DDR+PSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL
Sbjct: 301 DDRAPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQM+YRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGN+Q SSTQEFYK+V+TS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNRQQSSTQEFYKMVVTS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYRPD 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEEN Y+PD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENCYKPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYN+LILGCCKS+RTDLALEVFE+MVDKGYLPNETTYTILVEGI+HEKEIDLA KVL+
Sbjct: 481 TENYNALILGCCKSQRTDLALEVFEVMVDKGYLPNETTYTILVEGIIHEKEIDLAAKVLK 540
Query: 541 ELQLRDVISQSTVERLVMQYDLNELPL 568
ELQLRDVISQSTV+RLVMQYDLN+LPL
Sbjct: 541 ELQLRDVISQSTVDRLVMQYDLNDLPL 567
BLAST of HG10013839 vs. ExPASy TrEMBL
Match:
A0A5A7U8T1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G001460 PE=4 SV=1)
HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 538/567 (94.89%), Postives = 556/567 (98.06%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITN SPETTRRGCGFFSHIPNL KLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1 MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWRTGKVDQKSRELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKLRKAIKVM 120
LPNW+TGKV+QKS+ELRL DAFFHLEFMVEKGQKPDVFQATQLLYDLCKACK+RKAIKVM
Sbjct: 61 LPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVSSLC+KGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIELLDEIIAKGGKPNLVSY 240
GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA +LLDEIIAKGG+PNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDAI+LFRELPSKGFSPNVVSYNILLRSLC EGRWEEANVLLAEM+G
Sbjct: 241 NVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
D+RSPS VTYNILIGSL LHGRTEHALEVLEEMIRARFKPTASSYNPIIA LCKD K+DL
Sbjct: 301 DERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQM+YRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYRPD 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGML+EAIEIFSVMEENN +PD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYNSLILGCCKSRRTDLAL+VFEIMV KGYLPNETTYTILVEGI+HEKE+DLATKVLR
Sbjct: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLR 540
Query: 541 ELQLRDVISQSTVERLVMQYDLNELPL 568
ELQLRDVISQST+ERLVMQYDLNELPL
Sbjct: 541 ELQLRDVISQSTLERLVMQYDLNELPL 566
BLAST of HG10013839 vs. ExPASy TrEMBL
Match:
E5GBB3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 538/567 (94.89%), Postives = 556/567 (98.06%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITN SPETTRRGCGFFSHIPNL KLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1 MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWRTGKVDQKSRELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKLRKAIKVM 120
LPNW+TGKV+QKS+ELRL DAFFHLEFMVEKGQKPDVFQATQLLYDLCKACK+RKAIKVM
Sbjct: 61 LPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVSSLC+KGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIELLDEIIAKGGKPNLVSY 240
GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA +LLDEIIAKGG+PNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDAI+LFRELPSKGFSPNVVSYNILLRSLC EGRWEEANVLLAEM+G
Sbjct: 241 NVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
D+RSPS VTYNILIGSL LHGRTEHALEVLEEMIRARFKPTASSYNPIIA LCKD K+DL
Sbjct: 301 DERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQM+YRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYRPD 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGML+EAIEIFSVMEENN +PD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYNSLILGCCKSRRTDLAL+VFEIMV KGYLPNETTYTILVEGI+HEKE+DLATKVLR
Sbjct: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLR 540
Query: 541 ELQLRDVISQSTVERLVMQYDLNELPL 568
ELQLRDVISQST+ERLVMQYDLNELPL
Sbjct: 541 ELQLRDVISQSTLERLVMQYDLNELPL 566
BLAST of HG10013839 vs. ExPASy TrEMBL
Match:
A0A1S3BA04 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487653 PE=4 SV=1)
HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 538/567 (94.89%), Postives = 556/567 (98.06%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITN SPETTRRGCGFFSHIPNL KLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1 MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWRTGKVDQKSRELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKLRKAIKVM 120
LPNW+TGKV+QKS+ELRL DAFFHLEFMVEKGQKPDVFQATQLLYDLCKACK+RKAIKVM
Sbjct: 61 LPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVSSLC+KGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIELLDEIIAKGGKPNLVSY 240
GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA +LLDEIIAKGG+PNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDAI+LFRELPSKGFSPNVVSYNILLRSLC EGRWEEANVLLAEM+G
Sbjct: 241 NVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
D+RSPS VTYNILIGSL LHGRTEHALEVLEEMIRARFKPTASSYNPIIA LCKD K+DL
Sbjct: 301 DERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQM+YRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYRPD 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGML+EAIEIFSVMEENN +PD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYNSLILGCCKSRRTDLAL+VFEIMV KGYLPNETTYTILVEGI+HEKE+DLATKVLR
Sbjct: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLR 540
Query: 541 ELQLRDVISQSTVERLVMQYDLNELPL 568
ELQLRDVISQST+ERLVMQYDLNELPL
Sbjct: 541 ELQLRDVISQSTLERLVMQYDLNELPL 566
BLAST of HG10013839 vs. ExPASy TrEMBL
Match:
A0A0A0L2W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G613170 PE=4 SV=1)
HSP 1 Score: 1080.1 bits (2792), Expect = 0.0e+00
Identity = 536/567 (94.53%), Postives = 554/567 (97.71%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITNPSPETTRRGCGFFSHIPN+ KLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWRTGKVDQKSRELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKLRKAIKVM 120
LPNW+ GK+DQKS+ELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCK CK+RKAIKVM
Sbjct: 61 LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDA+SYTFLVSSLC+KGNVGYAMQLVDKMEEYGYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIELLDEIIAKGGKPNLVSY 240
GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA +LLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDA+QLFRELPSKGFSPNVVSYNILLRSLC EGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
D+RSPS VTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL
Sbjct: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQM+YRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQH STQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYRPD 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGML+EAIEIFSVMEE N + D
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYNSLILGCCKSRRTDLAL+VFEIMV KGYL NETTYTILVEGI+HEKE+DLAT+VLR
Sbjct: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLR 540
Query: 541 ELQLRDVISQSTVERLVMQYDLNELPL 568
ELQLRDVI+QSTVERLVMQYDLNELPL
Sbjct: 541 ELQLRDVINQSTVERLVMQYDLNELPL 566
BLAST of HG10013839 vs. TAIR 10
Match:
AT1G79080.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 762.3 bits (1967), Expect = 2.8e-220
Identity = 383/577 (66.38%), Postives = 473/577 (81.98%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPN--LHKLSLNKGFSKVLASTQITISPKDTI 60
M+TLLN+V + +P + R+ GF SHIP+ LH S++KG ++VLASTQIT+SPKD+
Sbjct: 1 MSTLLNSVLSMASPE-SSPRKAVGFVSHIPSGFLHFSSVSKGVARVLASTQITLSPKDSA 60
Query: 61 FTL------PNWRTGKV--DQKSRELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKA 120
FT+ P+ +G D +S E L+D+F HLE +V G KP+V +TQLLYDLCKA
Sbjct: 61 FTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKA 120
Query: 121 CKLRKAIKVMEMMIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTY 180
+L+KAI+V+E+M+ SGIIPDAS+YT+LV+ LCK+GNVGYAMQLV+KME++GYP+NTVTY
Sbjct: 121 NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTY 180
Query: 181 NSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIELLDEIIA 240
N+LVRGLCM G+L QSLQ ++RL+QKGL PNA+TYSFLLEAAYKERG DEA++LLDEII
Sbjct: 181 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 240
Query: 241 KGGKPNLVSYNVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEE 300
KGG+PNLVSYNVLLTG CKEGRT+DA+ LFRELP+KGF NVVSYNILLR LC +GRWEE
Sbjct: 241 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 300
Query: 301 ANVLLAEMDGDDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRA--RFKPTASSYNPI 360
AN LLAEMDG DR+PS+VTYNILI SL HGRTE AL+VL+EM + +F+ TA+SYNP+
Sbjct: 301 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV 360
Query: 361 IARLCKDRKVDLVVKCLDQMIYRHCNPNEGTYNAIATLCE-EGMVQEAFSIIQSLGNKQH 420
IARLCK+ KVDLVVKCLD+MIYR C PNEGTYNAI +LCE VQEAF IIQSL NKQ
Sbjct: 361 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQK 420
Query: 421 SSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIE 480
T +FYK VITSLCRKGNT+ AFQLLYEMT+ GF PD+ TYS+LIRGLC+EGM A+E
Sbjct: 421 CCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAME 480
Query: 481 IFSVMEEN-NYRPDTENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGI 540
+ S+MEE+ N +P +N+N++ILG CK RRTDLA+EVFE+MV+K +PNETTY ILVEGI
Sbjct: 481 VLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 540
Query: 541 VHEKEIDLATKVLRELQLRDVISQSTVERLVMQYDLN 564
HE E++LA +VL EL+LR VI Q+ V+R+VMQ++L+
Sbjct: 541 AHEDELELAKEVLDELRLRKVIGQNAVDRIVMQFNLD 576
BLAST of HG10013839 vs. TAIR 10
Match:
AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 392.9 bits (1008), Expect = 4.4e-109
Identity = 196/487 (40.25%), Postives = 306/487 (62.83%), Query Frame = 0
Query: 71 QKSRELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKLRKAIKVMEMMIGSGIIP 130
Q R L + F LE MV G PD+ T L+ C+ K RKA K++E++ GSG +P
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 131 DASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLL 190
D +Y ++S CK G + A+ ++D+M + VTYN+++R LC G L Q++++L
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVL 230
Query: 191 DRLIQKGLVPNAYTYSFLLEAAYKERGADEAIELLDEIIAKGGKPNLVSYNVLLTGLCKE 250
DR++Q+ P+ TY+ L+EA ++ G A++LLDE+ +G P++V+YNVL+ G+CKE
Sbjct: 231 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 290
Query: 251 GRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRSPSIVTY 310
GR ++AI+ ++PS G PNV+++NI+LRS+C GRW +A LLA+M SPS+VT+
Sbjct: 291 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 350
Query: 311 NILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMIY 370
NILI L G A+++LE+M + +P + SYNP++ CK++K+D ++ L++M+
Sbjct: 351 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 410
Query: 371 RHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYP 430
R C P+ TYN + T LC++G V++A I+ L +K S Y VI L + G T
Sbjct: 411 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 470
Query: 431 AFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYRPDTENYNSLIL 490
A +LL EM PD+ TYSSL+ GL EG +DEAI+ F E RP+ +NS++L
Sbjct: 471 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 530
Query: 491 GCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLRELQLRDVIS 550
G CKSR+TD A++ M+++G PNET+YTIL+EG+ +E A ++L EL + ++
Sbjct: 531 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMK 590
Query: 551 QSTVERL 557
+S+ E++
Sbjct: 591 KSSAEQV 594
BLAST of HG10013839 vs. TAIR 10
Match:
AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 342.4 bits (877), Expect = 6.8e-94
Identity = 178/479 (37.16%), Postives = 276/479 (57.62%), Query Frame = 0
Query: 85 LEFMVEKGQKPDVFQATQLLYDLCKACKLRKAIKVMEMMIGSGIIPDASSYTFLVSSLCK 144
LE MV KG PDV T+L+ + KA++VME++ G PD +Y L++ CK
Sbjct: 112 LETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCK 171
Query: 145 KGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
+ A +++D+M + +TVTYN ++ LC G L +L++L++L+ P T
Sbjct: 172 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 231
Query: 205 YSFLLEAAYKERGADEAIELLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIQLFRELP 264
Y+ L+EA E G DEA++L+DE++++G KP++ +YN ++ G+CKEG + A ++ R L
Sbjct: 232 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 291
Query: 265 SKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRSPSIVTYNILIGSLTLHGRTE 324
KG P+V+SYNILLR+L +G+WEE L+ +M + P++VTY+ILI +L G+ E
Sbjct: 292 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 351
Query: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMIYRHCNPNEGTYNAI- 384
A+ +L+ M P A SY+P+IA C++ ++D+ ++ L+ MI C P+ YN +
Sbjct: 352 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 411
Query: 385 ATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFT 444
ATLC+ G +A I LG S Y + ++L G+ A ++ EM G
Sbjct: 412 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 471
Query: 445 PDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYRPDTENYNSLILGCCKSRRTDLALEV 504
PD TY+S+I LC EGM+DEA E+ M + P YN ++LG CK+ R + A+ V
Sbjct: 472 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 531
Query: 505 FEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLRELQLRDVISQSTVERLVMQYDL 563
E MV G PNETTYT+L+EGI A ++ +L D IS+ + +RL + L
Sbjct: 532 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFPL 589
BLAST of HG10013839 vs. TAIR 10
Match:
AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 260.4 bits (664), Expect = 3.4e-69
Identity = 135/454 (29.74%), Postives = 239/454 (52.64%), Query Frame = 0
Query: 91 KGQKPDVFQATQLLYDLCKACKLRKAIKVMEMMIGSGIIPDASSYTFLVSSLCKKGNVGY 150
KG +++ + ++ C+ KL A M +I G PD +++ L++ LC +G V
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 151 AMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLE 210
A++LVD+M E G+ +T N+LV GLC++G ++ ++ L+DR+++ G PN TY +L+
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 211 AAYKERGADEAIELLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIQLFRELPSKGFSP 270
K A+ELL ++ + K + V Y++++ GLCK+G ++A LF E+ KGF
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 271 NVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRSPSIVTYNILIGSLTLHGRTEHALEVL 330
+++ Y L+R CY GRW++ LL +M +P +V ++ LI G+ A E+
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 331 EEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMIYRHCNPNEGTYNAIAT-LCEE 390
+EMI+ P +Y +I CK+ ++D LD M+ + C PN T+N + C+
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 391 GMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTY 450
++ + + + + + + Y +I C G A +L EM PD +Y
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 451 SSLIRGLCMEGMLDEAIEIFSVMEENNYRPDTENYNSLILGCCKSRRTDLALEVFEIMVD 510
L+ GLC G ++A+EIF +E++ D YN +I G C + + D A ++F +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 511 KGYLPNETTYTILVEGIVHEKEIDLATKVLRELQ 544
KG P+ TY I++ G+ + + A + R+++
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
BLAST of HG10013839 vs. TAIR 10
Match:
AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 258.5 bits (659), Expect = 1.3e-68
Identity = 135/454 (29.74%), Postives = 240/454 (52.86%), Query Frame = 0
Query: 91 KGQKPDVFQATQLLYDLCKACKLRKAIKVMEMMIGSGIIPDASSYTFLVSSLCKKGNVGY 150
KG +++ + ++ C+ KL A M +I G P+ +++ L++ LC +G V
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE 176
Query: 151 AMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLE 210
A++LVD+M E G+ + +T N+LV GLC+ G +++ L+D++++ G PNA TY +L
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 211 AAYKERGADEAIELLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIQLFRELPSKGFSP 270
K A+ELL ++ + K + V Y++++ GLCK G ++A LF E+ KG +
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 271 NVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRSPSIVTYNILIGSLTLHGRTEHALEVL 330
N+++YNIL+ C GRW++ LL +M +P++VT+++LI S G+ A E+
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 331 EEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMIYRHCNPNEGTYNAIAT-LCEE 390
+EMI P +Y +I CK+ +D + +D M+ + C+PN T+N + C+
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 391 GMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTY 450
+ + + + + + + Y +I C G A +L EM P+ TY
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 451 SSLIRGLCMEGMLDEAIEIFSVMEENNYRPDTENYNSLILGCCKSRRTDLALEVFEIMVD 510
L+ GLC G ++A+EIF +E++ D YN +I G C + + D A ++F +
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 511 KGYLPNETTYTILVEGIVHEKEIDLATKVLRELQ 544
KG P TY I++ G+ + + A + R+++
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038899825.1 | 0.0e+00 | 98.06 | pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Benincasa ... | [more] |
XP_022141778.1 | 0.0e+00 | 94.53 | pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Momordica ... | [more] |
XP_008444287.1 | 0.0e+00 | 94.89 | PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic ... | [more] |
XP_011653982.1 | 0.0e+00 | 94.53 | pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucumis sa... | [more] |
KAG6607968.1 | 5.6e-308 | 92.95 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
A3KPF8 | 3.9e-219 | 66.38 | Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... | [more] |
Q3EDF8 | 6.2e-108 | 40.25 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... | [more] |
Q9SR00 | 9.6e-93 | 37.16 | Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... | [more] |
Q9ASZ8 | 4.8e-68 | 29.74 | Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX... | [more] |
Q0WKV3 | 1.8e-67 | 29.74 | Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CLJ3 | 0.0e+00 | 94.53 | pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Momordic... | [more] |
A0A5A7U8T1 | 0.0e+00 | 94.89 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
E5GBB3 | 0.0e+00 | 94.89 | Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo OX=41267... | [more] |
A0A1S3BA04 | 0.0e+00 | 94.89 | pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Cucumis ... | [more] |
A0A0A0L2W8 | 0.0e+00 | 94.53 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G613170 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G79080.1 | 2.8e-220 | 66.38 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G09900.1 | 4.4e-109 | 40.25 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT3G04760.1 | 6.8e-94 | 37.16 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G12620.1 | 3.4e-69 | 29.74 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G12300.1 | 1.3e-68 | 29.74 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |