HG10013833 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013833
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein isoform 2
Location	Chr02: 5171684 .. 5184333 (-)
RNA-Seq Expression	HG10013833
Synteny	HG10013833

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAACCAAGCAGAGGCCGTCGCTCGCCGCCGTCGGGGTCGGGTTCCTCCTCACGTTCCCGCTCACTCTCCGGCTCTGATTCCCGCTCCAGTTCCCGCTCGCGCTCCAGGTCTGCATCTGTGTCCCGCTCCCGCTCTCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCTCTCTCGCAGCGGTAGTTCTCGGAGCCGAAGCCCCCCTCCTCAGAGAAAGAGGTTCGTCTTTCATTCGAGCTTGCATTTTCGTTTTTGGGGTTTTGCATTTGGTGCTTATTGGTTGCCAGTATGAGAGGAATATTCAGAATTAGGTTTTCTATGACTGGGAGTCTGGTTGATTAAGCATTTCCCTTTATGTCGCCGTTGATTGGATCTTCATGTATTTATTCGAAGCCAAAATTTGGAAACATTACGTTATCAAGAAACAGACGCGCTTCGTATACCAAATGTTAATCATTTTTAAGCGGTCATTATACATCGAAATCACATTTCCATTTGTTTTTCAGTCCGACTGAAACAGCTCGGCGGACTCGCGCTTCACCTCCACCAGCTAAACGAAGTTCTCCGCCAGCCAGGTTATAACGTCTCCATCTACATTATACAGTCAAATCAAACTTCTCATTTCTTTTTCACCTCATTAACATTATAGTTTCTTCATTATTTGTTCATGGCACGCATTTTCCGATAAGTCGAACATTTATGCTCTGGCGCGTTTTTTGATGCTCGCCTTTTGTTAAACACTTTCGAGCCTCTTCAATGATTGTTTTTCTGCTGTTTGTTTAATATGTTACAAGTTAGGGATGGCTAGGGAACAATTTATAGTATGTCGTGTATCTTTGTTCAACTGCGATGCTTCGTCTTGGACATGCGGTTAATGGATTAACACCATATGCCGAGTTTTAAACTTGGTTTCCTCTGTAATTCGTTATTATTTTTTTTTAAAGAGAGTTCATTATCTTTTATGATTATACTTTGTTTTTTTGAAACTGTATTGCATTTACTTTTTCTCTTCCGGAGCTTGTATGTATTGAGCATTAGCCACTCTTTTCATTCAATTGATGAAAAGTTGTCTCGTGTTAAAAAAAACCTGGTTCGATTTACATTCATTAACTATTTATGGAAACAGAAGAAAATCTTTGAACTCAATACTTCTTCAGAACTGTGGTGCAACTATTGCATTGTTTTCAAATTTTAATCGTTATTTGCCCTTGTTGAACTCGAATTGGATAAACAATGTTCTATTACCTTTAATTATCATGCATTGTAAATTTTATCTTTTAGTAATCTATAACAATGTGCAATTCTTATGTCATTGACTATTAAAACACTGTCATATGAATTTTGTTTGTAATATTTCCTTCCGTTGTGCATTTGTATATCAATCATTTACATCCACTGCTTTCTTTTTGTGATATTTTCCTTGTCTGTCAGTCATATTTATATAATTTGTTTTTCACACCGTGTGTATTGATTTCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCATATTGATGCACTGAGTAGGAATGTCCACGAGGGTCATTTAAGAGAAATCTTCAGTATGGGTTTTCACTCGCTTTCTTTGGCCTTTTAAACAATTATTGTGATGGATCAATGCACTTATGTTTTCGTATCATTATTTTTTAAATGTTACATGTTGAATACATCGATTAAAACCAAAGTGCAAGACAAAGTGAACTTTTATTTCAAACACATCATCTGAATGATATAACACTTTGACTTCACGAACTTAGTATTTTGTCTTATAAAGAAAAACTTGGTGTATATTTGTGAAAATATATGTATTTATGTAGTAGATTCAATTCAACGTAGTCTGTTTGTTGGTATCGATCATTGACCATGTTGTTTTGTCCTTAATAATTGATTAATTAGTCATATCAATTACTCTTCCTCCCATCTGATATGTAAAGTTTCTGCATGCTAATTCCTTCCTTTCCTCTCAGCTGTTTCTAAACTATATATAGTTTCTTTTCACGAATATATTGCATAAAATTAGTTGTAATTTTTTAGTCTCATTCAATCAAAGGGTTCACCCTCAAATATAAATTTTCCTCCAAAAACCTCTTTATGGCTCAGTAGGCTTGATGATTATTAGATTTAATAGGTAATCTGTTACTTTTTCTTACGGATTTTTTTTTTCAAAAAAAAAAATGTAGCTCTTACAAATCTCCTTTTTTCTCTCTTGTTACCCTTTAGGTAATTTTGGTGAAGTAGTCAATGTCGAGCTGGCAATGGATCGCACAGTGAGTGTTTACCATGCATATTGGATTTGATGAACTTTTTTCTTGAATAATATATTGATGCATCTGTTCTAATTCTTACAGGTCAACCTTCCTAAAGGATATGGATATGTTGAATTCAAAACGAGATCTGATGCTGAAAAAGCCCAAGTGTATATGGATGGTGTAGGTTTTGCTTAAATGTTCAAGTACTTGAAGTGTATCTATTGATATTGTCTCATAACTGGGAAATGATTGTGTTGATTGGCTAAATGTAGGCCCAAATTGATGGGAATGTTATTCGAGCAAGATTTACATTGCCTCAAAGACAGAAGATGCCAACACCTCCAAGGACTGTAGCAACCGTTCCAAAGAGAGATGGTCCTAAGCCTGAAAATGTTGGTCCTGATGCTGAGAAGGATGACATGAAAAGAGCGAGAGAACGTATAACTCAATAGTTATATGTTTTTCACTGTCCAACTGTTTTTGCCTATTATTCTATTTTATTTTTCATGAGTATATTATTTTATTGATTTATGTCTCGTTTGTTACATTAGCTTCTCCTCGTCGTAAACCTCCTTCACCTAGAAGACGCTCGCCTGTTGCTCGACGAGGTGGGTCTCCTAGAAGACAACCCGATTCTCCACGCCGTCGTCCGGAGTCTCCTCCACGCCGTCGCATAGAATCTCCTTTTCGTCGTGATTCTCCTCCTCCTAGAAGAAGGCCTGCATCGCCCATGAGAGGCGGTCGTTCCCCATCCCCTTTGGGAAGACGACATAGATCTCCTCCAAGGTTGGCCATCATCCCCCAACTCTTCAACCCTCACAACCACAAACTCACAAAATATATCTCCTTTCTTAAAATGGTGGGAGCATTAACATTGTTTAACTTCGGTTGAATAGGCCCTCTCCAAGAAGAATTCGTGGCAGTCCTGTTCGAAGGCGTTCACCACCACCTCCTAGGCGCCGGTATTATGCATTTGACTGTTTTCAGATATCGTTGTCTTTGCTCTTGCACTTCGAATGATACACAGATGTTTATTGTTTCTAACCTCACAAATCTATCACATAATGTCAAGGTTGACTATTTACGCCTTACTGCAAAAATTATGCAGAAAGAGCATATGTAAATATCGTTTTTTGTTTAAATCTTGAATTATTGTTTTTAGAGCGTGTGTTTCTTTTATTTTAAGATTTTGAGAAACACCAGGTATTTGTAGAAGAATAAAAATTGCATCAGGTTTTGTTTAGTTCTACGGTTCTTGTTGGCCATTGATCATTTTGTTATGCCTTGACACAGGTAACTGTGGTTTTTGGGTGATCCGAGCTAATTTAGATTAATGCTATTGCAGACTTCGATTGACTGAGAGCATGGTTACTTTCTAATGTTTGAGAAATTAACGCATTTAAGCATATGGCAGTTAGATCTTTAAATTGCTTGTTCACTGTGATTGAGCATAGTTACTTGAAAGTGCTGTAGTCTAACTCAGTGGTTTCAGTTACGTTTTTACTTAGGTACATGAGAGTTGCATTATTAAATCATGTTTCTTTCTCAGTACACCACCTCGACGTGCTCGTAGTCCTCCCAGAAGGTCTCCAGTAGTTCGTAGACGAAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCCCGATCATTTTCACCACGGAGGTAACTTGATGCCTAATGAATTTTTTTGTCATGACCAATGAACTGCCTTTTAAAGGAAAACTATTAGTATCTATGGATTTGTATGCCTAATGATTTTTTTTCTTTTTTTGTATGATCAAATCCCTTTTAAGAAAAACTATTTAATATTGTTTGATTGTCCACTCTGTGTCTGTGGTGCATAAATTAAATGACGAAGTAGATCACATGTCCCTACCATGGGCATTGATTAAGAAGGAAAAATAATCACAATGAACCCTTTCTGAACATCCCAAACTCCCAAGTGAGAGATATGAAATGAATGTGAAGATGGTGGTTGGGCGCTCTGTGAATCAAGGTGGGTTGGAGATTAGCAATTTAAGACTTTGTAACAAAGCTCTGTTGGCTAAGTGGCTTTGGTGTTTTGCCCTTGAACTCGAATCTGTGGCATAGAATCATTGTGAGTAAGCACGGTACACATCCCTTTGATTGGGTGGCAAAGGGGGCTAAAGGCACACATCGGAATCCTTGGCAAGATATTGTGATTGAGCTTCCCTTGTTCTCCCACTTGGTTTGTTACATTGTGAGGGATGGTAAGAAAATGTATTTTTGGGAAGATCAGTGGGTTGGGGATAGTCCTCTTTGCCTTGCGTTTCCTCATCTTTATCACTTGTCTTCTTTTAAAAACCGTCCGATCTTTGACTTTCTAGTTTGGCCAGGGAGCTCTGTGTCCTTTTCTTTTGGTTTCCGTCATCATTTATCTAATAGGGAGATGACGGAGGTTGTCTCTTTTCTTTTTTGTTGGAAGGGTGCAATTTTAGGGAGGGGAGAAGGGATGTTCGTGTCTGGAAGCCTAATCATGTTGATGACTTTTCTTGTAAATTGTTCTTTAGTATGCTACCGAATCCTTCTCCTGTTAGTGAGTCGGTTTTTGATGTGGTCAGGAAGATTAAGATACCAAAGAAAACCAAGTTCTTTGCCTGGCAAGTTTTGCTTGACCATTTGCTAGGAAGATGGCCTCATTAACAAGTCCTTTTTGTTGTATTCTCTATCACAAGGCAGGGAAAAACTTGGATCACCTTTCTTGGGGCTGTCAGTTTGCGGGGTCTGTGTGGAATTGTTACATGTAGGAATTTGACGTTCAGATTGTTGGCTTGAGGGATATTCGTGCGATGATTGGGGAATTCCTCCTCCATCTGCCTTTTAGAGAGAAATGTCGTTTGTGGTGGTCTACTGGGGTGTGTGTTGTGCATTCTCAGTGCACCCTTTAGTAATTGTGATAACATCTCAGATGCTCTTGGCTAAAGTTGCAGTTGCCATTTGCCAAGCCAAGTTTCTTCTTAAAGAAGCAAACGTTGGCAGATGTATTATCTTTTACTCCAATTGTCAAACTGCTAGACCTAGGCCTAAAATGCTTTGATGTCTGGTCTTGTGTTTGGGGGTTTTATGTATATATTATAATGATGATCAGAAACTAACCTTTAAACGATCTCAATATCCTATTATTACCTAAAATTTTGTTTAAGAAACAATAATCAGAAATGCCTCCAAATTCTCAAAAAAAAAATGTATGTACATAGTTGAATATTAGTGGATAACATTTGTACTGTAAAGTTAGCTTTTTGAAAAGGATGAAAAGAAAGTGCACCTGTGGTAGCTGGCTTGTTCAATATCATATCCTTTGTTCCACTTTGTTGGGTTTATGGTGAGAGAAATATTAAAATTTGCAGGGGTGGGCAAGATCTTATAGCGATGGTTGGTCCCTGTAAGATTTGATGTTTCTTTTTAGGCTTTAGAGACTAGGTCATTTTGTAATTACTCTCAAGGTCTTATTTTATTGAGTGGTCCCTTTCTATATTCATTGCTTGGCCTCTCTTTCTTGTGGGCTTCTTTTTTTAATGTCGGCGCATTCTTTCACTTCAATGGAAGTTTGGTTTCTCAATTGGAAAAAAAAAAATCATATCATCGACTACTTTACCCTTTCTGTGATCGTTAGCTATTCCACAGTGCTATTACCCGTGTTTTTTTTATGCCCGCTGTAATCCATTTGTTGATCTTATAATTTTCTTATGGTGATCTCTATCTAGAGGTCGGCCGGCAGCTGCTGGTAGACGTGGGAGATCATCATCCTATTCTGGGTCACCTAGTCCACGCAAGGTTTGATCTTCCCATTCTTACCTGTTTTGTTGCTTGTTTTTACTTGCATTGCAGTCGCTTGACTTTTCTCTATTTTATTTTACAGGTGGCCAGGAGGGTATCTCGCAGTCCAAGAAGGTAATCCCGTGCATTACATAAGATATCAATATTTCTGAAAATGTTAGAAAGACCCATTTTGCTCCCTAGTTTTTAAAACAGAACCAGACTTTTTATTAAAATAATGTGAAACAAAAGAAAACTTAGCAACAAATGAAAATACAAGGACCAAAATAGACCAATACTATATCAAACTAAACAAATTTAGCTTAAGAATAAATGGATGCATTCCAATTTAAATTAATATCTTTGAATAGATTCAAGACATTAGTTTAAATCAAGAAAAATGCTTAGATGCATCCTGTGTTGTACCATCTATCTTTGTGCATCCCATCAAATTGCCCAATCATTATTTGCCACTTGGAAAATTCACTTGTACTTCTTTTTTTTTTTTAATATTTTAATTCTTTTTGTTAAGTGTGATGAGAGTGGGATGCATTGCTCTTAAATCACTTGAGGCCGGTGTATAGACTATTGTCATTTCACTTAAAACGAAAGACTTTATTTTTCCCAACCCATAAACCACATAGCGCCATTAAACTTGGATATTCTTTATACCGAGCTTCTAGATAACTGAACAAGTAGGTGCTCGATTCATAGTAAGTTTGGAATGACTTTCAAGAGTAAGAAGCACTCTTGAAATAATGGACTTTAATGCTTTTCAAGTGTTTTCAAGTTCTGCGATCTTGATCATCAAACTAGACACCATTAATTCTCTCTTAAATCTTACATTATTAATATATATATTTAATCATTGTAATGTGATTGTTTGGTGTGTATAGGCCTTTGAGAGGAAGAAGCAGCAGCAGGAGCAGTAGCAGTAGTTCTCCACCCCGTAAGCCATAAGAATTCTACACATCTCTCTCTTTCTCTCTCTAATTCTCTCTTGTTCTATCTGTGTATTCCAAAAGATGCGACGTTTTCTTTTTCCCCATCTGGTAAAGAGTTTTATTGTACCAAAAATATTTGGATGAAATGCCCCATTTTGGTTTGTTTGTAGTTAGTTTTCCTGTTATTATTGGATTAGAACATTTAGATATACTTTGTTCTAATTGCAGTCTGTAGTATTATTACACTTCTTCTACTATTGAAAGGTCCAGACGTGGAGTTCATCCTTTTCTTGTGTTTATGGTTATTACTTGGGCTTTCTCCCCTGTTTTGTTAATCCTTTACATAAATTAGAGATTATATCTGAACTTTCAAATTTGTATCCATTTATTGTCTGCATTTTTTAAATTTTAAAATGTTTAATTTTAGTTTATATACTTTTAATCAATCTTAAATTTCGTCTCTTAGTTAATTATTATTGAAATTGGTTAAATAATAATGATAATTTTCTTTTGTAAGAAAATATAATATGTGAATATGTTTTTAAAATGTATAGTGAAAATGCTTATAAATAAAAAAAAATTAAAAAAATCAACCATACTTAAAACAAGTATAGAAGTACATGATTAAAATTGAACCAAATGGTATTATAACTTTTGATTTTTACTTCATAAAGTGCCTAGGAAATTGTTTTTAGGCCAAAAAAAATTCTAACCTACACAACACAAAGTTTAATGTTTATAGTCCTATTTGAAAATAATTAATTTTATTCTGGATGTATCTTTTATTTTTTTCAAAACGTTTATACATGTTTGGTATCTATTAGATACACAAGTTTTAAGTTTAGGGTTTAATAGATGTTTTTAAATTTTGAAGATTTATTTGAAAATCTAAAATTCAGGGAACTAACTGGACATTTTTAATAGAAAAATTTGTGTTTTGACCAAATCATTTTTATAGTTTTGTTTTGTTTTCATACACATTCTAGTGTATATTTGGTTGAGATAAGGTTTGAATCTCATCTTGGACTTTTAGTTTCTTTTATTTAGTCTATCTTAATATTTTCATTTGATATTTCGAACTTTGTTGATAACATTTTAAGTAAAAATAAAAATTATTATTTGTTTGAAGTTCAAAGATTGAAGTAAGATATTTTGAAAGTTAAAAGTTGATCAACTAAAATAGAAATAGAACTTGAAAACTTAAAGAGTTTTAGAATTATAATGAGATTTAGACCTTGTTCAATTAACAAATGTTATTTTGTTAGTTTTTTCCTTAAAAAAAATTTAACAAATATGAATTTAACATTTTTGCTCGGTTTACTTTCTTCCATTGAAGCCATTGGGAGATTCAAGTCTCCTCCATTCGAGTTTCTTTTGTGGGTTCACATGGATAATTTTGATAATTCATTCAAATAACATCATTTTTGTGACATATGGAAAGCGAGATTTTTATAGATTTTGTTTAAATCTAATTTTTTACTTTAAAATTTAAGGAAATTTTTACAGATAGAAAAAAATGTAAAATTATTTACAAAAAATAGCAAAAAAAAAAAAAAATAGAAAACACTGATGGACATTGATAAACTTATATCGACATCTATCAGTGATAGACTTCTATCATTTCTATCACTTATAGACCTTGATAGACGTCTATCACAACTACCTAAAATTTTGCTATATTGTATAAATAGTTTTCCTTATTTTTCTATTTGTAAAAACTCTCCTAAAATTTATGCTTGTTTCTTTCTAATTCTTTTACTCTAAATTAAAAAAAAAAAAAAAAGGTGTAGTGAGATTTAAACTTATTTTTAATGAAAAAAAATGAAAAGAAATGACAACTCCAAATGGTTATCAAACGAGACCTAAACTTTTGAAAGATCTATTTTTGTCTTTAACTTTTCAACTTTATTCTATTTTGTTTAATGAAGTTTCTAAATGTCTATCATAGTCCATAAACTTTAAAAATTAATCATTCTAATCTTTGCTATATTACTTTTATACTCTACTTTAAGTTTCGCTCAAGAAAGTTCGCTCGTAATTTATTTGACTCAAAATCATGCTCAGATTAACATATAAACACATACTTAAAACTATGCTATTGATTTGTTAAAATTAATATAATCGTAAGAACTAAAATATTTTTTTAAGTAAAATAATAAAATAGACCTTTTAAAAGTTTAGATACTAAAATAAAACAAACTTCAAAATTTAAGATAAGATAAACATTTTAAAAGTTGACCGAAACAAAATAAACTTGTTTTTTTTTAAAATCAAAATATAATGGAAACCTACAAAAAAAAAAAAATCACTTGTTTGAGATATGAATAATTTGATAGATTGACCTACAAAATTTAGTCAAAATGTCATGTGACCTATCTTTCTCTCTTGTTTTTTTCTCTCTAGATCCCTTCTTTGTATTTTGCCTTCGGCAACGACAATGCTTCTTTCCTATATGCTGCCTCCAGTGATAACAACAACGACACCGAGCAAAGTTGTTTTTCCTTCTTCTGGTAACGTGTGTTGATTGGCAACTCCATAACATACCATTTTTTGAGACGTGAAATGAACTTGAAAGAAAACAAGAAGTGAGCAAGAACCAAATAAGAGCAAAAAAAAATCTAAACGGTCAACTTTCATTATTTAAAAAAAAAAAAAATTAGGTCAATCCTTACAGAAATCCCATGAGATATCTATAGGAAGTCTATTTTGCGGATTTTGCCCAATGATTTACAGAAAACGCCATTTCGGACAGTAACGCACCAAATGGAAGAGGAGAAAACGGCGCAAACTTCTTGGTCAAATTGACTCTCAGGTCGCCATTCTTGATTCTTCTCCAATTCTCATCCTCTCTCTTGACGTTTTCTTGGCGCAAATCTCCCTGTATACCCTCTAAAATCCGCCATTTTCCCAACTTTTTTCAGCTTGATTTTGATCTTCGCTCAGTTGCTGTCAAGAACGCAAGGTAAACGTCTTACTCCAGCGACTTAGGAAGGAACACTCGTCATATTCAGGTCTGTTTACAAGTTACTCAGTTTTTGGCGTCAATCTTTCGCCATGGATTTAGGGCTTTGAATTTAATCCAAACCCGACCTTCGGATGTTGCTCTAATCGACGGGTTTTGTTCGGTTTTGCATTTTACAATTGTTAGATATCTGTGTGACAGGTGAGTTGGGGGATTGTATGGTTATTTGCCTCGTGTTAATTCTGCAGAAGTTTTAGTTGTAAGTGGTAGATGAAAGGAAGCATGGGTAGTAATTTGTTTGAGTTGGGTATGCGAGAAAATATGTTTGCTACTAATATTGAATTTTCTTTTAATATGTTTAGTTGACTTTCAAATTCCCAGTTTTAAGAGGTTAAACCATACATACTTCTATGAATTAGTATTTGTTATTGCCCTCACTGATTGGGCTTTTCGATTGTTCTTGTTTATATAATGAACAGAGTTGCTTAAATTGAGGTGTTTGGCCGTTGAAAGCATTCCATTTCATGGCAGGCAATGGCCTGCCATCATTGGGTCGTGTGAAGCTTACCGATATAGCACCATCTGAAGGATTTCCTTCTGAGTCTTTCAAATTGTCGGTCTCAACTCTATCACATTCACTAGCTCAATACTCTGCTGCCATCATTCAATTCCCTGCTTGTGATGGGGCTCTTTTAAGGTCCGTTTTAGATTCTGCTCGTCTCTACTGCCACCAGAGGGCTGCATGTTCATCTGCTGAGTTGATGCAAAACAATGATTCACGGGAGTGGTGCAGAACTTCTGGTTACTATGTGGATGCTCAGATGTGGCAAGAAACATATGATTATAGGCCTGGATTGACTCCAGTGGAGCCCAGCAATGGAATGGAGTTACAACCTGCGGGTTTGCCAGACATTTTTGCTCTCTATGGAAAGGCATCTCGAATTATTTTGGATGCCATCAGCTTCTACCTAAACTTGCGCAGCTCTCCTTTCACGGAAATACTTGATAATGTCCCCCTAAGAAGCAGGGATATATCATCTTCTGTGTTGTCTGTGTGCTGTTATGGGAGACCCTCATTTCATGGAGAGCATCACCATAAACTAACTGCTCAAGAGGATAGCCAGTTGGCTATGTATGCATCGGACCATGACCATCAAATTGATAAAAGTCTTATTACTCTGGTCAAGTCGGATAAGGCAGTTTTACTAATAAAGGATTTCAATGGTAGATGGATTCTTGTGGATGGTGATCTTGGCCCTCAAGATGCTATAGTTTATCCTGGACTTGCACTCTATCAAGCAACTGCGGGGTATGTGAATCCTGCTTTGCTCAGAACAGATGTGAATAATATTCAAGGTAGTATGTATGGACGGTGTTCCTTATCATTCAAACTCATGCCTAAATCCATGACTAGCCTCAGTTGTTCAGAAATGAGAGCAGCTGGCCATGGGGTAGATGTTCAGTTCCAGCTTCCAGTACCAGTGGATGACTTTATGCAGAGATCACACTCAACTGACGAACTTTTTAACCGCCCCAAATTTCAGAATTTCAGTTTCTCTACATCACAAGATGGTAGGCCAAATATTATTCTTATAATTTTTAATTTTGGAGCCGATGAATATCATTTATTGAGGTTCCCCCCCTTTTGTTCTGTAACCTCCCTTGGTATGGGGTCGACTCTCCCTCTTTTGTAGTTTAATTACATCAATTAAATTGTTTCTTATAAGAAGAAAAAGTCATTTATTGAGGGTTTATAAATGCAATATTAATTTTCTTTTACATGTTTAGTACTTAGCTGCTTGGTTTGATTGATGTTAGTTGTGCTTCTTTCTACAGTACACACAATGCTTCTGTAGGTTGCTGAAATTCAAATTTCCCTTCCCTTCGATGTTTTACCTAGACGTAATAAAGAGCCATCTGTTTAGATTGCCATTTTGCTATATATTTGGAGAATTTCTCTTAGTGAAAGAGCGTTGTGAGAAAATGATTTATGTTTCAATGTATATTTTTGGGTGAATTATGGATTGGAGGCCATGTATTTGCATTATTTTGATATTTATTATTGCTTGATAGTTTGAATGCTTGCTTGCCCGAGTATTTAGTTGTTCATTTCATCTTTATCCACTTGTTGGGTAGTGTTCCTTCTATAGTAATTTCTTAGCGTTAGTAGCCACCTTAGTGAGAAGCTTTCAATTAACAGGGTGTTGGATCGATGAAATGCTGGTACAGGATCCATAAAAATGAGGAGGAGAAAGAATAATTCAAGTACCAAACCTCTACCCCCTTCTAAGAGATTACGGCTTGAGGCACAGAGAGTTCTGAAGGAGAAAGTACAGGATATTGCAGATAAGAAGGGTATCAAATTGAGGTTCTGTAATCTGAAGGATTGTGAGAGTCACATTCACACATTAGATAGCCCTTGTGCCAGCACAAGAATGGAGATTGGATGGCCTCCTGGAGTGCCGTTCGTTCATCCTCACGATCTACCTAATAAGGCAAAAATTGGTTTTCTTGAAGCTTACGAGCCTGGTTGGACAGCTAGTCATGACGTTGAATTAAGTCTTACTGAACCTGGGCAAGTGGGTCAACAGTCACCCAACTGTAAGTGGATCTCTGTCATATTCATATATGCATGCATCGACTGGTTCTTGTTTTTTACTCCAACAAGTTCCTGCTTTGCAATCAATGTGAATGAAGCTTACTGA

mRNA sequence

ATGGCGAAACCAAGCAGAGGCCGTCGCTCGCCGCCGTCGGGGTCGGGTTCCTCCTCACGTTCCCGCTCACTCTCCGGCTCTGATTCCCGCTCCAGTTCCCGCTCGCGCTCCAGGTCTGCATCTGTGTCCCGCTCCCGCTCTCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCTCTCTCGCAGCGGTAGTTCTCGGAGCCGAAGCCCCCCTCCTCAGAGAAAGAGTCCGACTGAAACAGCTCGGCGGACTCGCGCTTCACCTCCACCAGCTAAACGAAGTTCTCCGCCAGCCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCATATTGATGCACTGAGTAGGAATGTCCACGAGGGTAATTTTGGTGAAGTAGTCAATGTCGAGCTGGCAATGGATCGCACAGTCAACCTTCCTAAAGGATATGGATATGTTGAATTCAAAACGAGATCTGATGCTGAAAAAGCCCAAGTGTATATGGATGGTGCCCAAATTGATGGGAATGTTATTCGAGCAAGATTTACATTGCCTCAAAGACAGAAGATGCCAACACCTCCAAGGACTGTAGCAACCGTTCCAAAGAGAGATGGTCCTAAGCCTGAAAATGTTGGTCCTGATGCTGAGAAGGATGACATGAAAAGAGCGAGAGAACCTTCTCCTCGTCGTAAACCTCCTTCACCTAGAAGACGCTCGCCTGTTGCTCGACGAGGTGGGTCTCCTAGAAGACAACCCGATTCTCCACGCCGTCGTCCGGAGTCTCCTCCACGCCGTCGCATAGAATCTCCTTTTCGTCGTGATTCTCCTCCTCCTAGAAGAAGGCCTGCATCGCCCATGAGAGGCGGTCGTTCCCCATCCCCTTTGGGAAGACGACATAGATCTCCTCCAAGGCCCTCTCCAAGAAGAATTCGTGGCAGTCCTGTTCGAAGGCGTTCACCACCACCTCCTAGGCGCCGTACACCACCTCGACGTGCTCGTAGTCCTCCCAGAAGGTCTCCAGTAGTTCGTAGACGAAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCCCGATCATTTTCACCACGGAGAGGTCGGCCGGCAGCTGCTGGTAGACGTGGGAGATCATCATCCTATTCTGGGTCACCTAGTCCACGCAAGGTGGCCAGGAGGGTATCTCGCAGTCCAAGAAGAAGTTTTAGTTGCAATGGCCTGCCATCATTGGGTCGTGTGAAGCTTACCGATATAGCACCATCTGAAGGATTTCCTTCTGAGTCTTTCAAATTGTCGGTCTCAACTCTATCACATTCACTAGCTCAATACTCTGCTGCCATCATTCAATTCCCTGCTTGTGATGGGGCTCTTTTAAGGTCCGTTTTAGATTCTGCTCGTCTCTACTGCCACCAGAGGGCTGCATGTTCATCTGCTGAGTTGATGCAAAACAATGATTCACGGGAGTGGTGCAGAACTTCTGGTTACTATGTGGATGCTCAGATGTGGCAAGAAACATATGATTATAGGCCTGGATTGACTCCAGTGGAGCCCAGCAATGGAATGGAGTTACAACCTGCGGGTTTGCCAGACATTTTTGCTCTCTATGGAAAGGCATCTCGAATTATTTTGGATGCCATCAGCTTCTACCTAAACTTGCGCAGCTCTCCTTTCACGGAAATACTTGATAATGTCCCCCTAAGAAGCAGGGATATATCATCTTCTGTGTTGTCTGTGTGCTGTTATGGGAGACCCTCATTTCATGGAGAGCATCACCATAAACTAACTGCTCAAGAGGATAGCCAGTTGGCTATGTATGCATCGGACCATGACCATCAAATTGATAAAAGTCTTATTACTCTGGTCAAGTCGGATAAGGCAGTTTTACTAATAAAGGATTTCAATGGTAGATGGATTCTTGTGGATGGTGATCTTGGCCCTCAAGATGCTATAGTTTATCCTGGACTTGCACTCTATCAAGCAACTGCGGGGTATGTGAATCCTGCTTTGCTCAGAACAGATGTGAATAATATTCAAGGTAGTATGTATGGACGGTGTTCCTTATCATTCAAACTCATGCCTAAATCCATGACTAGCCTCAGTTGTTCAGAAATGAGAGCAGCTGGCCATGGGGTAGATGTTCAGTTCCAGCTTCCAGTACCAGTGGATGACTTTATGCAGAGATCACACTCAACTGACGAACTTTTTAACCGCCCCAAATTTCAGAATTTCAGTTTCTCTACATCACAAGATGGATCCATAAAAATGAGGAGGAGAAAGAATAATTCAAGTACCAAACCTCTACCCCCTTCTAAGAGATTACGGCTTGAGGCACAGAGAGTTCTGAAGGAGAAAGTACAGGATATTGCAGATAAGAAGGGTATCAAATTGAGGTTCTGTAATCTGAAGGATTGTGAGAGTCACATTCACACATTAGATAGCCCTTGTGCCAGCACAAGAATGGAGATTGGATGGCCTCCTGGAGTGCCGTTCGTTCATCCTCACGATCTACCTAATAAGGCAAAAATTGGTTTTCTTGAAGCTTACGAGCCTGGTTGGACAGCTAGTCATGACGTTGAATTAAGTCTTACTGAACCTGGGCAAGTGGGTCAACAGTCACCCAACTGTAAGTGGATCTCTGTCATATTCATATATGCATGCATCGACTGGTTCTTGTTTTTTACTCCAACAAGTTCCTGCTTTGCAATCAATGTGAATGAAGCTTACTGA

Coding sequence (CDS)

ATGGCGAAACCAAGCAGAGGCCGTCGCTCGCCGCCGTCGGGGTCGGGTTCCTCCTCACGTTCCCGCTCACTCTCCGGCTCTGATTCCCGCTCCAGTTCCCGCTCGCGCTCCAGGTCTGCATCTGTGTCCCGCTCCCGCTCTCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCTCTCTCGCAGCGGTAGTTCTCGGAGCCGAAGCCCCCCTCCTCAGAGAAAGAGTCCGACTGAAACAGCTCGGCGGACTCGCGCTTCACCTCCACCAGCTAAACGAAGTTCTCCGCCAGCCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCATATTGATGCACTGAGTAGGAATGTCCACGAGGGTAATTTTGGTGAAGTAGTCAATGTCGAGCTGGCAATGGATCGCACAGTCAACCTTCCTAAAGGATATGGATATGTTGAATTCAAAACGAGATCTGATGCTGAAAAAGCCCAAGTGTATATGGATGGTGCCCAAATTGATGGGAATGTTATTCGAGCAAGATTTACATTGCCTCAAAGACAGAAGATGCCAACACCTCCAAGGACTGTAGCAACCGTTCCAAAGAGAGATGGTCCTAAGCCTGAAAATGTTGGTCCTGATGCTGAGAAGGATGACATGAAAAGAGCGAGAGAACCTTCTCCTCGTCGTAAACCTCCTTCACCTAGAAGACGCTCGCCTGTTGCTCGACGAGGTGGGTCTCCTAGAAGACAACCCGATTCTCCACGCCGTCGTCCGGAGTCTCCTCCACGCCGTCGCATAGAATCTCCTTTTCGTCGTGATTCTCCTCCTCCTAGAAGAAGGCCTGCATCGCCCATGAGAGGCGGTCGTTCCCCATCCCCTTTGGGAAGACGACATAGATCTCCTCCAAGGCCCTCTCCAAGAAGAATTCGTGGCAGTCCTGTTCGAAGGCGTTCACCACCACCTCCTAGGCGCCGTACACCACCTCGACGTGCTCGTAGTCCTCCCAGAAGGTCTCCAGTAGTTCGTAGACGAAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCCCGATCATTTTCACCACGGAGAGGTCGGCCGGCAGCTGCTGGTAGACGTGGGAGATCATCATCCTATTCTGGGTCACCTAGTCCACGCAAGGTGGCCAGGAGGGTATCTCGCAGTCCAAGAAGAAGTTTTAGTTGCAATGGCCTGCCATCATTGGGTCGTGTGAAGCTTACCGATATAGCACCATCTGAAGGATTTCCTTCTGAGTCTTTCAAATTGTCGGTCTCAACTCTATCACATTCACTAGCTCAATACTCTGCTGCCATCATTCAATTCCCTGCTTGTGATGGGGCTCTTTTAAGGTCCGTTTTAGATTCTGCTCGTCTCTACTGCCACCAGAGGGCTGCATGTTCATCTGCTGAGTTGATGCAAAACAATGATTCACGGGAGTGGTGCAGAACTTCTGGTTACTATGTGGATGCTCAGATGTGGCAAGAAACATATGATTATAGGCCTGGATTGACTCCAGTGGAGCCCAGCAATGGAATGGAGTTACAACCTGCGGGTTTGCCAGACATTTTTGCTCTCTATGGAAAGGCATCTCGAATTATTTTGGATGCCATCAGCTTCTACCTAAACTTGCGCAGCTCTCCTTTCACGGAAATACTTGATAATGTCCCCCTAAGAAGCAGGGATATATCATCTTCTGTGTTGTCTGTGTGCTGTTATGGGAGACCCTCATTTCATGGAGAGCATCACCATAAACTAACTGCTCAAGAGGATAGCCAGTTGGCTATGTATGCATCGGACCATGACCATCAAATTGATAAAAGTCTTATTACTCTGGTCAAGTCGGATAAGGCAGTTTTACTAATAAAGGATTTCAATGGTAGATGGATTCTTGTGGATGGTGATCTTGGCCCTCAAGATGCTATAGTTTATCCTGGACTTGCACTCTATCAAGCAACTGCGGGGTATGTGAATCCTGCTTTGCTCAGAACAGATGTGAATAATATTCAAGGTAGTATGTATGGACGGTGTTCCTTATCATTCAAACTCATGCCTAAATCCATGACTAGCCTCAGTTGTTCAGAAATGAGAGCAGCTGGCCATGGGGTAGATGTTCAGTTCCAGCTTCCAGTACCAGTGGATGACTTTATGCAGAGATCACACTCAACTGACGAACTTTTTAACCGCCCCAAATTTCAGAATTTCAGTTTCTCTACATCACAAGATGGATCCATAAAAATGAGGAGGAGAAAGAATAATTCAAGTACCAAACCTCTACCCCCTTCTAAGAGATTACGGCTTGAGGCACAGAGAGTTCTGAAGGAGAAAGTACAGGATATTGCAGATAAGAAGGGTATCAAATTGAGGTTCTGTAATCTGAAGGATTGTGAGAGTCACATTCACACATTAGATAGCCCTTGTGCCAGCACAAGAATGGAGATTGGATGGCCTCCTGGAGTGCCGTTCGTTCATCCTCACGATCTACCTAATAAGGCAAAAATTGGTTTTCTTGAAGCTTACGAGCCTGGTTGGACAGCTAGTCATGACGTTGAATTAAGTCTTACTGAACCTGGGCAAGTGGGTCAACAGTCACCCAACTGTAAGTGGATCTCTGTCATATTCATATATGCATGCATCGACTGGTTCTTGTTTTTTACTCCAACAAGTTCCTGCTTTGCAATCAATGTGAATGAAGCTTACTGA

Protein sequence

MAKPSRGRRSPPSGSGSSSRSRSLSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGSSRSRSPPPQRKSPTETARRTRASPPPAKRSSPPARKPSPVRESLVLHIDALSRNVHEGNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRAREPSPRRKPPSPRRRSPVARRGGSPRRQPDSPRRRPESPPRRRIESPFRRDSPPPRRRPASPMRGGRSPSPLGRRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSFSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRVSRSPRRSFSCNGLPSLGRVKLTDIAPSEGFPSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRSVLDSARLYCHQRAACSSAELMQNNDSREWCRTSGYYVDAQMWQETYDYRPGLTPVEPSNGMELQPAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSRDISSSVLSVCCYGRPSFHGEHHHKLTAQEDSQLAMYASDHDHQIDKSLITLVKSDKAVLLIKDFNGRWILVDGDLGPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMTSLSCSEMRAAGHGVDVQFQLPVPVDDFMQRSHSTDELFNRPKFQNFSFSTSQDGSIKMRRRKNNSSTKPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCESHIHTLDSPCASTRMEIGWPPGVPFVHPHDLPNKAKIGFLEAYEPGWTASHDVELSLTEPGQVGQQSPNCKWISVIFIYACIDWFLFFTPTSSCFAINVNEAY

Homology

[Close]

BLAST of HG10013833 vs. NCBI nr
Match: KAG6607974.1 (Serine/arginine-rich splicing factor SR45, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1250.7 bits (3235), Expect = 0.0e+00
Identity = 719/909 (79.10%), Postives = 735/909 (80.86%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSLSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPS SGSSSRSRS SGSDSRSSSRSRSRS SV  S S SRSISSSSS SR
Sbjct: 1   MAKPSRGRRSPPSRSGSSSRSRSYSGSDSRSSSRSRSRSRSV--SVSHSRSISSSSSPSR 60

Query: 61  SGSSRSRSPPPQRKSPTETARRTRASPPPAKRSSPPARKPSPVRESLVLHIDALSRNVHE 120
           S SSRSRSPPPQRKS TETARRTRASPPPAKRSSPP RKPSPVRESLVLHIDALSRNVHE
Sbjct: 61  SASSRSRSPPPQRKSSTETARRTRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 G-------NFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180
           G       NFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA
Sbjct: 121 GHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180

Query: 181 RFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRAREPSPRRKPPSPRRRSP 240
           RFTLPQRQKM +PPRT A   KRDGPKPENVG DAEKDDMKR REPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKMASPPRTAAAASKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 VARRGGSPRRQPDSPRRRPESPPRRRIESPFRRDSPPPRRRPASPMRGGRSPSPLGRRHR 300
           VARRGGSPRRQPDSPRRRPESPPRRR++S       PPRRRPASPMRGGRSPSPLGRRHR
Sbjct: 241 VARRGGSPRRQPDSPRRRPESPPRRRVDS-------PPRRRPASPMRGGRSPSPLGRRHR 300

Query: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360
           SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRP RSRSRS
Sbjct: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPGRSRSRS 360

Query: 361 FSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRVSRSPR---------------------R 420
           FSPRRGRP AAGRRGRSSSYS SPSPRKVARRVSRSPR                     R
Sbjct: 361 FSPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRSRPLRESPDVEFPVFKPDFDLR 420

Query: 421 SFSC---------------------------------------NGLPSLGRVKLTDIAPS 480
           S SC                                       NGLPSLGRVKLTD+APS
Sbjct: 421 SSSCCPEHKAKDLFQRLREERLSYSELLELSFWPLKAFHFMEGNGLPSLGRVKLTDLAPS 480

Query: 481 EGFPSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRSVLDSARLYCHQRAACSSAELM 540
           EG PSESFK SV+TLSHSLAQYSAAIIQFP  DGALLRS LDSARLY HQRAAC SAELM
Sbjct: 481 EGVPSESFKSSVTTLSHSLAQYSAAIIQFPVYDGALLRSGLDSARLYFHQRAACPSAELM 540

Query: 541 QNNDSREWCRTSGYYVDAQMWQETYDYRPGLTPVEPSNGMELQPAGLPDIFALYGKASRI 600
           QNNDS EWCRTSGYY+DAQ WQETYDYRPGLT VEP N ME+ PA               
Sbjct: 541 QNNDSLEWCRTSGYYMDAQGWQETYDYRPGLTQVEPGNEMEIPPA--------------- 600

Query: 601 ILDAISFYLNLRSSPFTEILDNVPLRSRDISSSVLSVCCYGRPSFHGEHHHKLTAQEDSQ 660
                            EILDNVPLRSR+ISSSVLSVCCYGRPSFHGEHHHK  AQEDSQ
Sbjct: 601 -----------------EILDNVPLRSREISSSVLSVCCYGRPSFHGEHHHKF-AQEDSQ 660

Query: 661 LAMYASDHDHQIDKSLITLVKSDKAVLLIKDFNGRWILVDGDLGPQDAIVYPGLALYQAT 720
           LAMY SDH+HQIDKSLITLVKSDKA LLIKDF+GRWILVDGDLGPQDA+VYPGLALYQAT
Sbjct: 661 LAMYTSDHEHQIDKSLITLVKSDKAGLLIKDFHGRWILVDGDLGPQDAVVYPGLALYQAT 720

Query: 721 AGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMTSLSCSEMRAAGHGVDVQFQLPVPV 780
           AGYVNPALLR +VNNIQ                        EMRAAGHGVDVQFQLPVPV
Sbjct: 721 AGYVNPALLRMEVNNIQ------------------------EMRAAGHGVDVQFQLPVPV 780

Query: 781 DDFMQRSHSTDELFNRPKFQNFSFSTSQDGSIKMRRRKNNSSTKPLPPSKRLRLEAQRVL 840
           DDFMQRS STD+LFNRP FQNFS STSQ+GSIK+RRRKNNSSTKPLPPSKRLRLEAQRVL
Sbjct: 781 DDFMQRSPSTDQLFNRPNFQNFSLSTSQEGSIKLRRRKNNSSTKPLPPSKRLRLEAQRVL 840

Query: 841 KEKVQDIADKKGIKLRFCNLKDCESHIHTLDSPCASTRMEIGWPPGVPFVHPHDLPNKAK 843
           KE+VQDIADKKGIKLRFCNLKDCESHIH LDSPCASTRMEIGWPPGVPFVHPHDLPNKAK
Sbjct: 841 KERVQDIADKKGIKLRFCNLKDCESHIHRLDSPCASTRMEIGWPPGVPFVHPHDLPNKAK 843

[Close]

BLAST of HG10013833 vs. NCBI nr
Match: KAF9673018.1 (hypothetical protein SADUNF_Sadunf11G0104600 [Salix dunnii])

HSP 1 Score: 1100.5 bits (2845), Expect = 0.0e+00
Identity = 610/865 (70.52%), Postives = 691/865 (79.88%), Query Frame = 0


Query: 63   SSRSRSPPPQRKSPTETARRTRASPPPAKRSSPPARKPSPVRESLVLHIDALSRNVHEG- 122
            + R RS  P R       +R R+ PP +K+ SPP RK SP+RESLVLHID+L+RNV+EG 
Sbjct: 594  AKRRRSDSPTR------VKRGRSPPPQSKKVSPPPRKASPIRESLVLHIDSLTRNVNEGH 653

Query: 123  ------NFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRARF 182
                  NFGEVV+VELAMDRTVNLPKG+GYVEFKTR+DAEKA +YMDGAQIDGNV+RA+F
Sbjct: 654  LREIFRNFGEVVHVELAMDRTVNLPKGFGYVEFKTRADAEKALLYMDGAQIDGNVVRAKF 713

Query: 183  TLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRAREPSPRRKP-PSPRRRSPV 242
            TLP RQK+  PP+ ++  PKRD PK +N   DAEKD  +R REPSP RKP  SPRRRSPV
Sbjct: 714  TLPPRQKLSPPPKPISAAPKRDAPKTDNPSADAEKDGPRRQREPSPNRKPLASPRRRSPV 773

Query: 243  ARRGGSPRRQPDS-PRRRPESPPRRRIESPFRRDSPPPRRRPASPMRGGRSPSPLGRRHR 302
            ARRGGSPRRQ DS PRRR +SP RRR+ESP+RR   PPRRRPASP R GRSPS   RR+R
Sbjct: 774  ARRGGSPRRQLDSPPRRRADSPGRRRVESPYRRGETPPRRRPASPAR-GRSPSSPPRRYR 833

Query: 303  SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 362
            SP R SPRR+RGSPVRRRS PPPRRRTPPRRARSPPRRSP +RRRSRSPIRRPARSRSRS
Sbjct: 834  SPLRTSPRRMRGSPVRRRS-PPPRRRTPPRRARSPPRRSP-LRRRSRSPIRRPARSRSRS 893

Query: 363  FSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRV--SRSPRRSFS---------------- 422
             SPRRGR A   RRGRSSSYSGSPSPRK  R++  SRSPRR+ S                
Sbjct: 894  LSPRRGR-APVARRGRSSSYSGSPSPRKPTRKISRSRSPRRARSRNWVLIIGNSRWFCKR 953

Query: 423  -----------------C--------------NGLPSLGRVKLTDIAPSEGFPSESFKLS 482
                             C              NGLP LGRVKL+D+ PSEG PSES+KLS
Sbjct: 954  KCDFRKWVCAEIAGCLICLSSGNHHSVSFMAGNGLPPLGRVKLSDLVPSEGLPSESYKLS 1013

Query: 483  VSTLSHSLAQYSAAIIQFPACDGALLRSVLDSARLYCHQRAACSSAELMQNNDSREWCRT 542
            V+TLS SL QYSAAIIQF + DGALLRS LDSARLY HQR++ ++ +++  +DSREWC+T
Sbjct: 1014 VTTLSQSLVQYSAAIIQFSSIDGALLRSGLDSARLYFHQRSSFAAPDMIHTSDSREWCKT 1073

Query: 543  SGYYVDAQMWQETYDYRPGLTPVEPSNGMELQPAGLPDIFALYGKASRIILDAISFYLNL 602
            SGYY+D Q+WQETYDYRPGLTP+EP+N ME+ P GLPDIF L GK +R ILDAISFYLNL
Sbjct: 1074 SGYYMDPQLWQETYDYRPGLTPIEPNNTMEIPPGGLPDIFCLLGKTARDILDAISFYLNL 1133

Query: 603  RSSPFTEILDNVPLRSRDISSSVLSVCCYGRPSFHGEHHHKLTAQEDSQLAMYASDHDHQ 662
            RSSPFTEILDNVPLR+R+ISSSVLSVCC+ RPSF G  HH LTA ED QL MY  DH+HQ
Sbjct: 1134 RSSPFTEILDNVPLRNREISSSVLSVCCHARPSFQGAQHHNLTAHEDGQLVMY-PDHEHQ 1193

Query: 663  IDKSLITLVKSDKAVLLIKDFNGRWILVDGDLGPQDAIVYPGLALYQATAGYVNPALLRT 722
            +DKSLI+LVKSDK  L I+D +GRW+LVD DLGPQ+ IVYPGLALYQATAGYVNPALLRT
Sbjct: 1194 VDKSLISLVKSDKPGLHIRDLHGRWVLVDVDLGPQEVIVYPGLALYQATAGYVNPALLRT 1253

Query: 723  DVNNIQGSMYGRCSLSFKLMPKSMTSLSCSEMRAAGHGVDVQFQLPVPVDDFMQRSHSTD 782
            + N++QGSMYGRCSL+FKLMPKSMTSL+CSEMRAAGHGV+ QFQLP+PVDDFMQRSH TD
Sbjct: 1254 EFNSMQGSMYGRCSLAFKLMPKSMTSLNCSEMRAAGHGVEAQFQLPIPVDDFMQRSHPTD 1313

Query: 783  ELFNRPKFQNFSFSTSQDGSIK--MRRRKNNSSTKPLPPSKRLRLEAQRVLKEKVQDIAD 842
            +LFNR  FQ+FSF T+QDGS+K  M+RRKNNS  KPLPPSKRLRLEAQRVLKE+VQDIAD
Sbjct: 1314 QLFNRHNFQSFSFPTAQDGSMKPLMKRRKNNSRCKPLPPSKRLRLEAQRVLKERVQDIAD 1373

Query: 843  KKGIKLRFCNLKDCESHIHTLDSPCASTRMEIGWPPGVPFVHPHDLPNKAKIGFLEAYEP 868
            KKGIKLRFCNLK+CE+HIH LDSPCA+ RMEIGWPPGVPFVHPHDLPNKAKI FLEAY P
Sbjct: 1374 KKGIKLRFCNLKECENHIHALDSPCANIRMEIGWPPGVPFVHPHDLPNKAKISFLEAYVP 1433

[Close]

BLAST of HG10013833 vs. NCBI nr
Match: KAB5534851.1 (hypothetical protein DKX38_017937 [Salix brachista])

HSP 1 Score: 1007.7 bits (2604), Expect = 6.4e-290
Identity = 633/1154 (54.85%), Postives = 715/1154 (61.96%), Query Frame = 0


Query: 32   SSRSRSRSASVSRSRSRSRSISSSSSLSRSGSSRSRSPPPQRKSPTETARRTRASPPPAK 91
            + R RS S ++SRSRSRS S SSSSS SRS SS SRSPPP RKSP E  +R R+ PP +K
Sbjct: 594  AKRRRSDSPTMSRSRSRSLS-SSSSSPSRSASSGSRSPPP-RKSPAEGVKRGRSPPPQSK 653

Query: 92   RSSPPARKPSPVRESLVLHIDALSRNVHEG------------------------------ 151
            + SPP RK SP+RESLVLHID+L+RNV  G                              
Sbjct: 654  KVSPPPRKASPIRESLVLHIDSLTRNVGFGGWSIGLWLIDAGLKLCGSWSLTGIVVDTCA 713

Query: 152  -----------------------NFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQ 211
                                   NFGEVV+VELAMDRTVNLPKG+GYVEFKTR DAEKA 
Sbjct: 714  LVFMYALSNCKWISLSCSLTCNSNFGEVVHVELAMDRTVNLPKGFGYVEFKTRVDAEKAL 773

Query: 212  VYMDGAQIDGNVIRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRARE 271
            +YMDGAQIDGNV+RA+FTLP RQK+  PP+ ++   KRD PK +N   DAEKD  KR RE
Sbjct: 774  LYMDGAQIDGNVVRAKFTLPPRQKLSPPPKPISAALKRDAPKTDNPSADAEKDGPKRQRE 833

Query: 272  PSPRRKP-PSPRRRSPVARRGGSPRRQPDS-PRRRPESPPRRRIESPFRRDSPPPRRRPA 331
            PSP RKP  SPRRRSPVARRGGSPRRQ DS PRRR +SP RRR+ESP+RR   PPRRRPA
Sbjct: 834  PSPLRKPLASPRRRSPVARRGGSPRRQLDSPPRRRADSPGRRRVESPYRRGETPPRRRPA 893

Query: 332  SPMRGGRSPSPLGRRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVR 391
            SP R GRSPS   RR+RSP R SPRR+RGSPVRRRS  PPRRRTPPRRARSPPRRSP +R
Sbjct: 894  SPAR-GRSPSSPPRRYRSPLRASPRRMRGSPVRRRS--PPRRRTPPRRARSPPRRSP-LR 953

Query: 392  RRSRSPIRRPARSRSRSFSPRR-----------------------------GRPAAAGRR 451
            RRSRSPIRRPARSRSRS SPRR                             GR A   RR
Sbjct: 954  RRSRSPIRRPARSRSRSLSPRRLDDIMCTPLFDIFILAHKGHLELVLGSDLGR-APVARR 1013

Query: 452  GRSSSYSGSPSPRKVARRV--SRSPR---------------------------------- 511
            GRSSSYSGSPSPRK  R++  SRSPR                                  
Sbjct: 1014 GRSSSYSGSPSPRKALRKISKSRSPRRLLGISRHSKFVANITEQVLQTLEDWSLGSRESD 1073

Query: 512  ------------------------------------------------------------ 571
                                                                        
Sbjct: 1074 PTGRFSVTGAAGNVKWLEDRYRYESQGWDQDLETQIDLANPNSLDGYNSQSKPCHGRFSV 1133

Query: 572  ------------------RSFSC------------------------------------- 631
                              RS +C                                     
Sbjct: 1134 TDAVENAKWPLSFLGFRARSRNCVLIIGNSRWFCKRKCDFRKWVCAEIADTKLRGCCLND 1193

Query: 632  ------------------------------------------------------------ 691
                                                                        
Sbjct: 1194 VGFEKRTVLKINESFNKFVLFSDEKMEIQVGMACHSRLPWKTKVPLTGPLDVCILVIICK 1253

Query: 692  ---------------------NGLPSLGRVKLTDIAPSEGFPSESFKLSVSTLSHSLAQY 751
                                 NGLP LGRVKL+D+ PSEG PSES+KLSV+TLS SL QY
Sbjct: 1254 MPWCLFCLSSGNHHSVSFMAGNGLPPLGRVKLSDLVPSEGLPSESYKLSVTTLSQSLVQY 1313

Query: 752  SAAIIQFPACDGALLRSVLDSARLYCHQRAACSSAELMQNNDSREWCRTSGYYVDAQMWQ 811
            SAAIIQF + DGALLRS LDSARLY HQR++  + +++  +DSREWC+TSGYY+D Q+WQ
Sbjct: 1314 SAAIIQFSSSDGALLRSGLDSARLYFHQRSSFPAPDMIHTSDSREWCKTSGYYMDPQLWQ 1373

Query: 812  ETYDYRPGLTPVEPSNGMELQPAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDN 868
            ETYDYRPGLTP+EP+N ME+ P GLPDIF L GK +R ILDAISFYLNLRSSPFTEILDN
Sbjct: 1374 ETYDYRPGLTPIEPNNSMEIPPGGLPDIFCLLGKTARDILDAISFYLNLRSSPFTEILDN 1433

[Close]

BLAST of HG10013833 vs. NCBI nr
Match: KAE8649785.1 (hypothetical protein Csa_012409 [Cucumis sativus])

HSP 1 Score: 928.3 bits (2398), Expect = 5.0e-266
Identity = 463/497 (93.16%), Postives = 471/497 (94.77%), Query Frame = 0


Query: 397 NGLPSLGRVKLTDIAPSEGFPSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRSVLDS 456
           NGLPSLGRVKLTDIAPSEG PSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRS LDS
Sbjct: 4   NGLPSLGRVKLTDIAPSEGVPSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRSGLDS 63

Query: 457 ARLYCHQRAACSSAELMQNNDSREWCRTSGYYVDAQMWQETYDYRPGLTPVEPSNGMELQ 516
           ARLY HQRAACSSAELMQ+NDSREWCRTSGYYVDAQMWQETYDYRPGLTPVEPSNGMEL 
Sbjct: 64  ARLYFHQRAACSSAELMQSNDSREWCRTSGYYVDAQMWQETYDYRPGLTPVEPSNGMELP 123

Query: 517 PAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSRDISSSVLSVCCYGRP 576
           PAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSR+ISSSVLSVCCYGRP
Sbjct: 124 PAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSREISSSVLSVCCYGRP 183

Query: 577 SFHGEHHHKLTAQEDSQLAMYASDHDHQIDKSLITLVKSDKAVLLIKDFNGRWILVDGDL 636
           SFHGEHHHKLTAQEDSQLAMY SDHD+QIDKSLITL K+DKA LLIKDFNGRWILVDGDL
Sbjct: 184 SFHGEHHHKLTAQEDSQLAMYTSDHDNQIDKSLITLFKADKAGLLIKDFNGRWILVDGDL 243

Query: 637 GPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMTSLSCSEM 696
           GPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMTSLSCSEM
Sbjct: 244 GPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMTSLSCSEM 303

Query: 697 RAAGHGVDVQFQLPVPVDDFMQRSHSTDELFNRPKFQNFSFSTSQDGSIKMRRRKNNSST 756
           RAAGHGVDVQFQLPVPVDDFMQRSHSTD+LFNRP FQNFSFSTSQDGSIKMRRRKNNSST
Sbjct: 304 RAAGHGVDVQFQLPVPVDDFMQRSHSTDQLFNRPNFQNFSFSTSQDGSIKMRRRKNNSST 363

Query: 757 KPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCESHIHTLDSPCASTRMEIGW 816
           KPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCESHIHTLDSPCASTRMEIGW
Sbjct: 364 KPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCESHIHTLDSPCASTRMEIGW 423

Query: 817 PPGVPFVHPHDLPNKAKIGFLEAYEPGWTASHDVELSLTEPGQVGQQSPNCKWISVIFIY 876
           PPGVPFVHPHDLPNKAKIGFLEAYEPGWT SHDVELSLTEPGQVGQQS N         Y
Sbjct: 424 PPGVPFVHPHDLPNKAKIGFLEAYEPGWTDSHDVELSLTEPGQVGQQSTN---------Y 483

Query: 877 ACIDWFLFF-TPTSSCF 893
           +C+  FLF+ T T   F
Sbjct: 484 SCLLLFLFYPTETGQSF 491

[Close]

BLAST of HG10013833 vs. NCBI nr
Match: XP_004144636.1 (uncharacterized protein LOC101216737 isoform X1 [Cucumis sativus] >XP_031740004.1 uncharacterized protein LOC101216737 isoform X2 [Cucumis sativus])

HSP 1 Score: 924.1 bits (2387), Expect = 9.3e-265
Identity = 455/470 (96.81%), Postives = 460/470 (97.87%), Query Frame = 0


Query: 397 NGLPSLGRVKLTDIAPSEGFPSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRSVLDS 456
           NGLPSLGRVKLTDIAPSEG PSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRS LDS
Sbjct: 4   NGLPSLGRVKLTDIAPSEGVPSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRSGLDS 63

Query: 457 ARLYCHQRAACSSAELMQNNDSREWCRTSGYYVDAQMWQETYDYRPGLTPVEPSNGMELQ 516
           ARLY HQRAACSSAELMQ+NDSREWCRTSGYYVDAQMWQETYDYRPGLTPVEPSNGMEL 
Sbjct: 64  ARLYFHQRAACSSAELMQSNDSREWCRTSGYYVDAQMWQETYDYRPGLTPVEPSNGMELP 123

Query: 517 PAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSRDISSSVLSVCCYGRP 576
           PAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSR+ISSSVLSVCCYGRP
Sbjct: 124 PAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSREISSSVLSVCCYGRP 183

Query: 577 SFHGEHHHKLTAQEDSQLAMYASDHDHQIDKSLITLVKSDKAVLLIKDFNGRWILVDGDL 636
           SFHGEHHHKLTAQEDSQLAMY SDHD+QIDKSLITL K+DKA LLIKDFNGRWILVDGDL
Sbjct: 184 SFHGEHHHKLTAQEDSQLAMYTSDHDNQIDKSLITLFKADKAGLLIKDFNGRWILVDGDL 243

Query: 637 GPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMTSLSCSEM 696
           GPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMTSLSCSEM
Sbjct: 244 GPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMTSLSCSEM 303

Query: 697 RAAGHGVDVQFQLPVPVDDFMQRSHSTDELFNRPKFQNFSFSTSQDGSIKMRRRKNNSST 756
           RAAGHGVDVQFQLPVPVDDFMQRSHSTD+LFNRP FQNFSFSTSQDGSIKMRRRKNNSST
Sbjct: 304 RAAGHGVDVQFQLPVPVDDFMQRSHSTDQLFNRPNFQNFSFSTSQDGSIKMRRRKNNSST 363

Query: 757 KPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCESHIHTLDSPCASTRMEIGW 816
           KPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCESHIHTLDSPCASTRMEIGW
Sbjct: 364 KPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCESHIHTLDSPCASTRMEIGW 423

Query: 817 PPGVPFVHPHDLPNKAKIGFLEAYEPGWTASHDVELSLTEPGQVGQQSPN 867
           PPGVPFVHPHDLPNKAKIGFLEAYEPGWT SHDVELSLTEPGQVGQQS N
Sbjct: 424 PPGVPFVHPHDLPNKAKIGFLEAYEPGWTDSHDVELSLTEPGQVGQQSTN 473

[Close]

BLAST of HG10013833 vs. ExPASy Swiss-Prot
Match: Q9SEE9 (Serine/arginine-rich splicing factor SR45 OS=Arabidopsis thaliana OX=3702 GN=SR45 PE=1 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 4.1e-98
Identity = 269/410 (65.61%), Postives = 312/410 (76.10%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSLSGSDSRSSSRSRSRSA---SVSRSRSRSRSISSSSS 60
           MAKPSRGRRSP           S+SGS SRSSSRSRS S+   S+SRSRSRSRS+SSSSS
Sbjct: 1   MAKPSRGRRSP-----------SVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSS 60

Query: 61  LSRSGSSRSRSPPPQRKSPTETARRTRA-SPPPAKRSSPPARKPSPVRESLVLHIDALSR 120
            SRS SS SRSPP + KSP   ARR R+  PPP+K +S P++K   V+ESLVLH+D+LSR
Sbjct: 61  PSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKK--AVQESLVLHVDSLSR 120

Query: 121 NVHE-------GNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGN 180
           NV+E       GNFGEV++VE+AMDR VNLP+G+GYVEFK R+DAEKAQ+YMDGAQIDG 
Sbjct: 121 NVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGK 180

Query: 181 VIRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKD-DMKRAREPSPRRKPP-S 240
           V++A FTLP RQK+ +PP+ V+  PKRD PK +N   DAEKD   +R RE SP+RK   S
Sbjct: 181 VVKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLS 240

Query: 241 PRRRSPVARRGGSPRRQ-PDSP-RRRPESPPRRRIESPFRRDSPPPRRRPASPMRGGRSP 300
           PRRRSP+ RRG SPRR+ PDSP RRRP SP RRR ++       PPRRRPASP RG    
Sbjct: 241 PRRRSPLPRRGLSPRRRSPDSPHRRRPGSPIRRRGDT-------PPRRRPASPSRGRSPS 300

Query: 301 SPLGRRHRSPPRPSPRRIRGSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRRSRSPIR 360
           SP  RR+RSPPR SPRRIRGSPVRRRSP P RRR+ PPRR RSPPRRSP +RRRSRSPIR
Sbjct: 301 SPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIR 360

Query: 361 RPARSRSRSFSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRV--SRSPRR 393
           RP RSRS S SPR+GR   AGRRGRSSSYS SPSPR++ R++  SRSP+R
Sbjct: 361 RPGRSRSSSISPRKGR-GPAGRRGRSSSYSSSPSPRRIPRKISRSRSPKR 388

[Close]

BLAST of HG10013833 vs. ExPASy Swiss-Prot
Match: Q28E41 (RNA-binding protein with serine-rich domain 1 OS=Xenopus tropicalis OX=8364 GN=rnps1 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 9.8e-15
Identity = 108/258 (41.86%), Postives = 134/258 (51.94%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSLSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGSS 64
           +R RRS  SGS SSSRSRS S S S S S S S S S S S S SRS SSSSS S S SS
Sbjct: 64  ARKRRSASSGSSSSSRSRSSSSSSSSSGSSSGSSSGSSSSSAS-SRSGSSSSSRSSSSSS 123

Query: 65  RSRSPPPQRKSPTETARRTRASPPPAKRSSPPARKPSPVRESLVLHIDALSRNVHE---- 124
            S SP P R+   +  RR+R+     KR     ++ SP      +HI  L+RNV +    
Sbjct: 124 SSGSPSPSRRR-HDNRRRSRSKSKQPKRDEKERKRRSPSPRPTKVHIGRLTRNVTKDHIL 183

Query: 125 ---GNFGEVVNVELAMDR-TVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRARFT 184
                +G++  +++ +DR   +L KGY YVEF+   +AEKA  +MDG QIDG  I A   
Sbjct: 184 EIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITASAV 243

Query: 185 LPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRAREPSPRRKPPSPRRRSPVAR 244
           L      P P R    +P+R  P    + P      M R   P  RR+  SPRRRSPV R
Sbjct: 244 L-----TPWPMR---AMPRRFSPPRRMLPP----PPMWRRSPPRMRRRSRSPRRRSPVRR 303

Query: 245 RGGSPRRQPDSPRRRPES 255
           R  SP R+    R    S
Sbjct: 304 RSRSPARRRHRSRSSSNS 307

[Close]

BLAST of HG10013833 vs. ExPASy Swiss-Prot
Match: Q3KPW1 (RNA-binding protein with serine-rich domain 1-B OS=Xenopus laevis OX=8355 GN=rnps1-b PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 6.3e-14
Identity = 106/258 (41.09%), Postives = 135/258 (52.33%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSLSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGSS 64
           ++ RRS  SGS SSSRSR  S S S SSS S S S+S S S + SRS SSSSS S S SS
Sbjct: 39  AKKRRSASSGSSSSSRSR--SSSSSSSSSGSSSGSSSGSSSSASSRSGSSSSSRSSSSSS 98

Query: 65  RSRSPPPQRKSPTETARRTRASPPPAKRSSPPARKPSPVRESLVLHIDALSRNVHE---- 124
            S SP P R+   +  RR+R+     KR     ++ SP      +HI  L+RNV +    
Sbjct: 99  SSGSPSPSRRR-HDNRRRSRSKSKQPKRDEKERKRRSPSPRPTKVHIGRLTRNVTKDHIL 158

Query: 125 ---GNFGEVVNVELAMDR-TVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRARFT 184
                +G++  +++ +DR   +L KGY YVEF+   +AEKA  +MDG QIDG  I A   
Sbjct: 159 EIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITASAV 218

Query: 185 LPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRAREPSPRRKPPSPRRRSPVAR 244
           L      P P R    +P+R  P    + P      M R   P  RR+  SPRRRSPV R
Sbjct: 219 L-----TPWPMR---AMPRRFSPPRRMLPP----PPMWRRSPPRMRRRSRSPRRRSPVRR 278

Query: 245 RGGSPRRQPDSPRRRPES 255
           R  SP R+    R    S
Sbjct: 279 RSRSPARRRHRSRSSSNS 281

[Close]

BLAST of HG10013833 vs. ExPASy Swiss-Prot
Match: Q5XG24 (RNA-binding protein with serine-rich domain 1-A OS=Xenopus laevis OX=8355 GN=rnps1-a PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-13
Identity = 105/258 (40.70%), Postives = 133/258 (51.55%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSLSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGSS 64
           ++ RRS  SGS SSS SR  S S S SSS S S S+S S S + SRS SSSSS S S SS
Sbjct: 39  AKKRRSGSSGSSSSSHSR--SSSSSSSSSGSSSGSSSGSSSSASSRSGSSSSSRSSSSSS 98

Query: 65  RSRSPPPQRKSPTETARRTRASPPPAKRSSPPARKPSPVRESLVLHIDALSRNVHE---- 124
            S SP P R+   +  RR+R+     KR     ++ SP      +HI  L+RNV +    
Sbjct: 99  SSGSPSPSRRR-HDNRRRSRSKSKQPKRDEKERKRRSPSPRPTKVHIGRLTRNVTKDHIL 158

Query: 125 ---GNFGEVVNVELAMDR-TVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRARFT 184
                +G++  +++ +DR   +L KGY YVEF+   +AEKA  +MDG QIDG  I A   
Sbjct: 159 EIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITASAV 218

Query: 185 LPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRAREPSPRRKPPSPRRRSPVAR 244
           L      P P R   + P+R  P P           M R   P  RR+  SPRRRSPV R
Sbjct: 219 LTPWPMRPMPRR--FSPPRRMLPPP----------PMWRRSPPRMRRRSRSPRRRSPVRR 278

Query: 245 RGGSPRRQPDSPRRRPES 255
           R  SP R+    R    S
Sbjct: 279 RSRSPARRRHRSRSSSNS 281

[Close]

BLAST of HG10013833 vs. ExPASy Swiss-Prot
Match: Q15287 (RNA-binding protein with serine-rich domain 1 OS=Homo sapiens OX=9606 GN=RNPS1 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-13
Identity = 105/258 (40.70%), Postives = 136/258 (52.71%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSLSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGSS 64
           +R RRS  SGS SS+RSRS S S S SS+ + S S S S S S SRS SSS+S S S SS
Sbjct: 62  TRKRRSASSGS-SSTRSRSSSTSSSGSSTSTGSSSGSSSSSAS-SRSGSSSTSRSSSSSS 121

Query: 65  RSRSPPPQRKSPTETARRTRASPPPAKRSSPPARKPSPVRESLVLHIDALSRNVHE---- 124
            S SP P R+   +  RR+R+   P KR     ++ SP  +   +HI  L+RNV +    
Sbjct: 122 SSGSPSPSRRR-HDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIM 181

Query: 125 ---GNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRARFT 184
                +G++  +++ ++R   +L KGY YVEF+   +AEKA  +MDG QIDG  I A   
Sbjct: 182 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAV 241

Query: 185 LPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRAREPSPRRKPPSPRRRSPVAR 244
           L      P PP    + P+R  P P           M R   P  RR+  SPRRRSPV R
Sbjct: 242 L---APWPRPPPRRFSPPRRMLPPP----------PMWRRSPPRMRRRSRSPRRRSPVRR 301

Query: 245 RGGSPRRQPDSPRRRPES 255
           R  SP R+    R    S
Sbjct: 302 RSRSPGRRRHRSRSSSNS 303

[Close]

BLAST of HG10013833 vs. ExPASy TrEMBL
Match: A0A6N2MRR7 (RRM domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS402987 PE=4 SV=1)

HSP 1 Score: 1149.0 bits (2971), Expect = 0.0e+00
Identity = 655/905 (72.38%), Postives = 741/905 (81.88%), Query Frame = 0


Query: 1    MAKPSRGRRS--PPSGSGSSSRSRSLSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSL 60
            MAKP+RGR +    SGSGSSSRSRS SGSDSR+SSR      SVSRSRSRS S SSSSS 
Sbjct: 635  MAKPTRGRPTSRTGSGSGSSSRSRSYSGSDSRTSSR------SVSRSRSRSLS-SSSSSP 694

Query: 61   SRSGSSRSRSPPPQRKSPTETARRTRASPPPAKRSSPPARKPSPVRESLVLHIDALSRNV 120
            SRS SS SRSPPP+++SP E  +R R+ PP +K+ SPP RK SP+RESLVLHID+L+RNV
Sbjct: 695  SRSASSGSRSPPPRKRSPAEGVKRGRSPPPQSKKVSPPPRKASPIRESLVLHIDSLTRNV 754

Query: 121  HEG-------NFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI 180
            +EG       NFGEV++VELAMDRTVNLPKG+GYVEFKTR DAEKA +YMDGAQIDGNV+
Sbjct: 755  NEGHLREIFSNFGEVLHVELAMDRTVNLPKGFGYVEFKTRVDAEKALLYMDGAQIDGNVV 814

Query: 181  RARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRAREPSPRRKP-PSPRR 240
            RA+FTLP RQK+  PP+ ++  PKRD PK +N   DAEKD  KR REPSP RKP  SPRR
Sbjct: 815  RAKFTLPPRQKLSPPPKPISAAPKRDAPKTDNPSADAEKDGPKRQREPSPLRKPLASPRR 874

Query: 241  RSPVARRGGSPRRQPDS-PRRRPESPPRRRIESPFRRDSPPPRRRPASPMRGGRSPSPLG 300
            RSPVARRGGSPRRQ DS PRRR +SP RRR+ESP+RR   PPRRRPASP R GRSPS   
Sbjct: 875  RSPVARRGGSPRRQLDSPPRRRADSPGRRRVESPYRRGETPPRRRPASPAR-GRSPSSPP 934

Query: 301  RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARS 360
            RR+RSP R SPRR+RGSPVRRRS  PPRRRTPPRRARSPPRRSP +RRRSRSPIRRPARS
Sbjct: 935  RRYRSPLRASPRRMRGSPVRRRS--PPRRRTPPRRARSPPRRSP-LRRRSRSPIRRPARS 994

Query: 361  RSRSFSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRVSRSPR------RSFS-------- 420
            RSRS SPRRGR A   RRGRSSSYSGSPSPRK  R++S+SPR      RS S        
Sbjct: 995  RSRSLSPRRGR-APVARRGRSSSYSGSPSPRKAPRKISKSPRSRPLRGRSSSNSSSSSSP 1054

Query: 421  -----------CNGLPSLGRVKLTDIAPSEGFPSESFKLSVSTLSHSLAQYSAAIIQFPA 480
                        NGLP LGRVKL+D+ PSEG PSES+KLSV+TLS SL QYSAAIIQF +
Sbjct: 1055 PRNHHSVSFMAGNGLPPLGRVKLSDLVPSEGLPSESYKLSVTTLSQSLVQYSAAIIQFSS 1114

Query: 481  CDGALLRSVLDSARLYCHQRAACSSAELMQNNDSREWCRTSGYYVDAQMWQETYDYRPGL 540
             DGALLRS LDSARLY HQR++  + +++  +DSREWC+TSGYY+D Q+WQETYDYRPGL
Sbjct: 1115 SDGALLRSGLDSARLYFHQRSSFPAPDMIHTSDSREWCKTSGYYMDPQLWQETYDYRPGL 1174

Query: 541  TPVEPSNGMELQPAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSRDIS 600
            TP+EP+N ME+ P GLPDIF L GK +R ILDAISFYLNLRSSPFTEILDNVPLR+ +IS
Sbjct: 1175 TPIEPNNTMEIPPGGLPDIFCLLGKTARDILDAISFYLNLRSSPFTEILDNVPLRNGEIS 1234

Query: 601  SSVLSVCCYGRPSFHGEHHHKLTAQEDSQLAMYASDHDHQIDKSLITLVKSDKAVLLIKD 660
            SSVLSVCC+ RPSF G  HH LTA E+ QL MY  DH+HQ+DKSLI+LVKSDK  L I+D
Sbjct: 1235 SSVLSVCCHARPSFQGAQHHNLTAHEEGQLVMY-PDHEHQVDKSLISLVKSDKPGLHIRD 1294

Query: 661  FNGRWILVDGDLGPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLM 720
             +GRW+LVD DLGPQ+ IVYPGLALYQATAGYVNPALLRT+ N++QGSMYGRCS++FKLM
Sbjct: 1295 LHGRWVLVDVDLGPQEVIVYPGLALYQATAGYVNPALLRTEFNSMQGSMYGRCSVAFKLM 1354

Query: 721  PKSMTSLSCSEMRAAGHGVDVQFQLPVPVDDFMQRSHSTDELFNRPKFQNFSFSTSQDGS 780
            PKSMTSL+CSEMRAAGHGV+ QFQLP+PVDDFMQRS  TD+LFNR  FQ+FSF T+QDGS
Sbjct: 1355 PKSMTSLNCSEMRAAGHGVEAQFQLPIPVDDFMQRSQPTDQLFNRHNFQSFSFPTAQDGS 1414

Query: 781  IK--MRRRKNNSSTKPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCESHIHT 840
            +K  M+RRKNNS  KPLPPSKRLRLEAQRVLKE+VQDIADKKGIKLRFCNLK+CE+HIH 
Sbjct: 1415 MKPLMKRRKNNSRCKPLPPSKRLRLEAQRVLKERVQDIADKKGIKLRFCNLKECENHIHA 1474

Query: 841  LDSPCASTRMEIGWPPGVPFVHPHDLPNKAKIGFLEAYEPGWTASHDVELSLTEPGQVGQ 868
            LDSPCA+ RMEIGWPPGVPFVHPHDLPNKAKI FLEAY PG  A+HD+ELS T+PGQ  Q
Sbjct: 1475 LDSPCANIRMEIGWPPGVPFVHPHDLPNKAKISFLEAYVPG--ATHDMELSFTDPGQGSQ 1524

[Close]

BLAST of HG10013833 vs. ExPASy TrEMBL
Match: A0A5N5KXP8 (RRM domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_017937 PE=4 SV=1)

HSP 1 Score: 1007.7 bits (2604), Expect = 3.1e-290
Identity = 633/1154 (54.85%), Postives = 715/1154 (61.96%), Query Frame = 0


Query: 32   SSRSRSRSASVSRSRSRSRSISSSSSLSRSGSSRSRSPPPQRKSPTETARRTRASPPPAK 91
            + R RS S ++SRSRSRS S SSSSS SRS SS SRSPPP RKSP E  +R R+ PP +K
Sbjct: 594  AKRRRSDSPTMSRSRSRSLS-SSSSSPSRSASSGSRSPPP-RKSPAEGVKRGRSPPPQSK 653

Query: 92   RSSPPARKPSPVRESLVLHIDALSRNVHEG------------------------------ 151
            + SPP RK SP+RESLVLHID+L+RNV  G                              
Sbjct: 654  KVSPPPRKASPIRESLVLHIDSLTRNVGFGGWSIGLWLIDAGLKLCGSWSLTGIVVDTCA 713

Query: 152  -----------------------NFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQ 211
                                   NFGEVV+VELAMDRTVNLPKG+GYVEFKTR DAEKA 
Sbjct: 714  LVFMYALSNCKWISLSCSLTCNSNFGEVVHVELAMDRTVNLPKGFGYVEFKTRVDAEKAL 773

Query: 212  VYMDGAQIDGNVIRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRARE 271
            +YMDGAQIDGNV+RA+FTLP RQK+  PP+ ++   KRD PK +N   DAEKD  KR RE
Sbjct: 774  LYMDGAQIDGNVVRAKFTLPPRQKLSPPPKPISAALKRDAPKTDNPSADAEKDGPKRQRE 833

Query: 272  PSPRRKP-PSPRRRSPVARRGGSPRRQPDS-PRRRPESPPRRRIESPFRRDSPPPRRRPA 331
            PSP RKP  SPRRRSPVARRGGSPRRQ DS PRRR +SP RRR+ESP+RR   PPRRRPA
Sbjct: 834  PSPLRKPLASPRRRSPVARRGGSPRRQLDSPPRRRADSPGRRRVESPYRRGETPPRRRPA 893

Query: 332  SPMRGGRSPSPLGRRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVR 391
            SP R GRSPS   RR+RSP R SPRR+RGSPVRRRS  PPRRRTPPRRARSPPRRSP +R
Sbjct: 894  SPAR-GRSPSSPPRRYRSPLRASPRRMRGSPVRRRS--PPRRRTPPRRARSPPRRSP-LR 953

Query: 392  RRSRSPIRRPARSRSRSFSPRR-----------------------------GRPAAAGRR 451
            RRSRSPIRRPARSRSRS SPRR                             GR A   RR
Sbjct: 954  RRSRSPIRRPARSRSRSLSPRRLDDIMCTPLFDIFILAHKGHLELVLGSDLGR-APVARR 1013

Query: 452  GRSSSYSGSPSPRKVARRV--SRSPR---------------------------------- 511
            GRSSSYSGSPSPRK  R++  SRSPR                                  
Sbjct: 1014 GRSSSYSGSPSPRKALRKISKSRSPRRLLGISRHSKFVANITEQVLQTLEDWSLGSRESD 1073

Query: 512  ------------------------------------------------------------ 571
                                                                        
Sbjct: 1074 PTGRFSVTGAAGNVKWLEDRYRYESQGWDQDLETQIDLANPNSLDGYNSQSKPCHGRFSV 1133

Query: 572  ------------------RSFSC------------------------------------- 631
                              RS +C                                     
Sbjct: 1134 TDAVENAKWPLSFLGFRARSRNCVLIIGNSRWFCKRKCDFRKWVCAEIADTKLRGCCLND 1193

Query: 632  ------------------------------------------------------------ 691
                                                                        
Sbjct: 1194 VGFEKRTVLKINESFNKFVLFSDEKMEIQVGMACHSRLPWKTKVPLTGPLDVCILVIICK 1253

Query: 692  ---------------------NGLPSLGRVKLTDIAPSEGFPSESFKLSVSTLSHSLAQY 751
                                 NGLP LGRVKL+D+ PSEG PSES+KLSV+TLS SL QY
Sbjct: 1254 MPWCLFCLSSGNHHSVSFMAGNGLPPLGRVKLSDLVPSEGLPSESYKLSVTTLSQSLVQY 1313

Query: 752  SAAIIQFPACDGALLRSVLDSARLYCHQRAACSSAELMQNNDSREWCRTSGYYVDAQMWQ 811
            SAAIIQF + DGALLRS LDSARLY HQR++  + +++  +DSREWC+TSGYY+D Q+WQ
Sbjct: 1314 SAAIIQFSSSDGALLRSGLDSARLYFHQRSSFPAPDMIHTSDSREWCKTSGYYMDPQLWQ 1373

Query: 812  ETYDYRPGLTPVEPSNGMELQPAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDN 868
            ETYDYRPGLTP+EP+N ME+ P GLPDIF L GK +R ILDAISFYLNLRSSPFTEILDN
Sbjct: 1374 ETYDYRPGLTPIEPNNSMEIPPGGLPDIFCLLGKTARDILDAISFYLNLRSSPFTEILDN 1433

[Close]

BLAST of HG10013833 vs. ExPASy TrEMBL
Match: A0A5D3CDS8 (2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold504G00580 PE=4 SV=1)

HSP 1 Score: 923.7 bits (2386), Expect = 5.9e-265
Identity = 457/486 (94.03%), Postives = 468/486 (96.30%), Query Frame = 0


Query: 393 SFSCNGLPSLGRVKLTDIAPSEGFPSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRS 452
           S+S NGLPSLGRVKLTDIAPSEG PSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRS
Sbjct: 84  SYSGNGLPSLGRVKLTDIAPSEGVPSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRS 143

Query: 453 VLDSARLYCHQRAACSSAELMQNNDSREWCRTSGYYVDAQMWQETYDYRPGLTPVEPSNG 512
            LDSARLY HQRAACSSAELMQNNDSREWCRTSGYYVD QMWQETYDYRPGLTPVEPS+G
Sbjct: 144 GLDSARLYFHQRAACSSAELMQNNDSREWCRTSGYYVDTQMWQETYDYRPGLTPVEPSSG 203

Query: 513 MELQPAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSRDISSSVLSVCC 572
           MEL PAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSR+ISSSVLSVCC
Sbjct: 204 MELPPAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSREISSSVLSVCC 263

Query: 573 YGRPSFHGEHHHKLTAQEDSQLAMYASDHDHQIDKSLITLVKSDKAVLLIKDFNGRWILV 632
           YGRPSFHGEHHHKLTAQEDSQL+MYASDHD+QIDKSLITL KSDKA LLIKDFNGRWILV
Sbjct: 264 YGRPSFHGEHHHKLTAQEDSQLSMYASDHDNQIDKSLITLFKSDKAGLLIKDFNGRWILV 323

Query: 633 DGDLGPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMTSLS 692
           DGDLGPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMT+LS
Sbjct: 324 DGDLGPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMTNLS 383

Query: 693 CSEMRAAGHGVDVQFQLPVPVDDFMQRSHSTDELFNRPKFQNFSFSTSQDGSIKMRRRKN 752
           CSEMRAAGHGVDVQFQLPVPVDDFMQRSHSTD+LFNRP FQNFSFSTSQDGSIKMRRRKN
Sbjct: 384 CSEMRAAGHGVDVQFQLPVPVDDFMQRSHSTDQLFNRPNFQNFSFSTSQDGSIKMRRRKN 443

Query: 753 NSSTKPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCESHIHTLDSPCASTRM 812
           +SSTKPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCE+HIHTLDSPCASTRM
Sbjct: 444 SSSTKPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCENHIHTLDSPCASTRM 503

Query: 813 EIGWPPGVPFVHPHDLPNKAKIGFLEAYEPGWTASHDVELSLTEPGQVGQQSPNCKWISV 872
           EIGWPPGVPFVHPHDLPNKAKIGFLEAYEPGWT SHDVELSLTEPGQVGQQS N    S+
Sbjct: 504 EIGWPPGVPFVHPHDLPNKAKIGFLEAYEPGWTDSHDVELSLTEPGQVGQQSTN----SL 563

Query: 873 IFIYAC 879
            F+  C
Sbjct: 564 FFLDQC 565

[Close]

BLAST of HG10013833 vs. ExPASy TrEMBL
Match: A0A5A7UD01 (2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G002100 PE=4 SV=1)

HSP 1 Score: 920.6 bits (2378), Expect = 5.0e-264
Identity = 455/482 (94.40%), Postives = 465/482 (96.47%), Query Frame = 0


Query: 397 NGLPSLGRVKLTDIAPSEGFPSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRSVLDS 456
           NGLPSLGRVKLTDIAPSEG PSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRS LDS
Sbjct: 4   NGLPSLGRVKLTDIAPSEGVPSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRSGLDS 63

Query: 457 ARLYCHQRAACSSAELMQNNDSREWCRTSGYYVDAQMWQETYDYRPGLTPVEPSNGMELQ 516
           ARLY HQRAACSSAELMQNNDSREWCRTSGYYVD QMWQETYDYRPGLTPVEPS+GMEL 
Sbjct: 64  ARLYFHQRAACSSAELMQNNDSREWCRTSGYYVDTQMWQETYDYRPGLTPVEPSSGMELP 123

Query: 517 PAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSRDISSSVLSVCCYGRP 576
           PAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSR+ISSSVLSVCCYGRP
Sbjct: 124 PAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSREISSSVLSVCCYGRP 183

Query: 577 SFHGEHHHKLTAQEDSQLAMYASDHDHQIDKSLITLVKSDKAVLLIKDFNGRWILVDGDL 636
           SFHGEHHHKLTAQEDSQL+MYASDHD+QIDKSLITL KSDKA LLIKDFNGRWILVDGDL
Sbjct: 184 SFHGEHHHKLTAQEDSQLSMYASDHDNQIDKSLITLFKSDKAGLLIKDFNGRWILVDGDL 243

Query: 637 GPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMTSLSCSEM 696
           GPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMT+LSCSEM
Sbjct: 244 GPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMTNLSCSEM 303

Query: 697 RAAGHGVDVQFQLPVPVDDFMQRSHSTDELFNRPKFQNFSFSTSQDGSIKMRRRKNNSST 756
           RAAGHGVDVQFQLPVPVDDFMQRSHSTD+LFNRP FQNFSFSTSQDGSIKMRRRKN+SST
Sbjct: 304 RAAGHGVDVQFQLPVPVDDFMQRSHSTDQLFNRPNFQNFSFSTSQDGSIKMRRRKNSSST 363

Query: 757 KPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCESHIHTLDSPCASTRMEIGW 816
           KPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCE+HIHTLDSPCASTRMEIGW
Sbjct: 364 KPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCENHIHTLDSPCASTRMEIGW 423

Query: 817 PPGVPFVHPHDLPNKAKIGFLEAYEPGWTASHDVELSLTEPGQVGQQSPNCKWISVIFIY 876
           PPGVPFVHPHDLPNKAKIGFLEAYEPGWT SHDVELSLTEPGQVGQQS N    S+ F+ 
Sbjct: 424 PPGVPFVHPHDLPNKAKIGFLEAYEPGWTDSHDVELSLTEPGQVGQQSTN----SLFFLD 481

Query: 877 AC 879
            C
Sbjct: 484 QC 481

[Close]

BLAST of HG10013833 vs. ExPASy TrEMBL
Match: A0A1S3CNW5 (uncharacterized protein LOC103503048 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503048 PE=4 SV=1)

HSP 1 Score: 919.8 bits (2376), Expect = 8.5e-264
Identity = 452/470 (96.17%), Postives = 460/470 (97.87%), Query Frame = 0


Query: 397 NGLPSLGRVKLTDIAPSEGFPSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRSVLDS 456
           NGLPSLGRVKLTDIAPSEG PSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRS LDS
Sbjct: 4   NGLPSLGRVKLTDIAPSEGVPSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRSGLDS 63

Query: 457 ARLYCHQRAACSSAELMQNNDSREWCRTSGYYVDAQMWQETYDYRPGLTPVEPSNGMELQ 516
           ARLY HQRAACSSAELMQNNDSREWCRTSGYYVD QMWQETYDYRPGLTPVEPS+GMEL 
Sbjct: 64  ARLYFHQRAACSSAELMQNNDSREWCRTSGYYVDTQMWQETYDYRPGLTPVEPSSGMELP 123

Query: 517 PAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSRDISSSVLSVCCYGRP 576
           PAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSR+ISSSVLSVCCYGRP
Sbjct: 124 PAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSREISSSVLSVCCYGRP 183

Query: 577 SFHGEHHHKLTAQEDSQLAMYASDHDHQIDKSLITLVKSDKAVLLIKDFNGRWILVDGDL 636
           SFHGEHHHKLTAQEDSQL+MYASDHD+QIDKSLITL KSDKA LLIKDFNGRWILVDGDL
Sbjct: 184 SFHGEHHHKLTAQEDSQLSMYASDHDNQIDKSLITLFKSDKAGLLIKDFNGRWILVDGDL 243

Query: 637 GPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMTSLSCSEM 696
           GPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMT+LSCSEM
Sbjct: 244 GPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMTNLSCSEM 303

Query: 697 RAAGHGVDVQFQLPVPVDDFMQRSHSTDELFNRPKFQNFSFSTSQDGSIKMRRRKNNSST 756
           RAAGHGVDVQFQLPVPVDDFMQRSHSTD+LFNRP FQNFSFSTSQDGSIKMRRRKN+SST
Sbjct: 304 RAAGHGVDVQFQLPVPVDDFMQRSHSTDQLFNRPNFQNFSFSTSQDGSIKMRRRKNSSST 363

Query: 757 KPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCESHIHTLDSPCASTRMEIGW 816
           KPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCE+HIHTLDSPCASTRMEIGW
Sbjct: 364 KPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCENHIHTLDSPCASTRMEIGW 423

Query: 817 PPGVPFVHPHDLPNKAKIGFLEAYEPGWTASHDVELSLTEPGQVGQQSPN 867
           PPGVPFVHPHDLPNKAKIGFLEAYEPGWT SHDVELSLTEPGQVGQQS N
Sbjct: 424 PPGVPFVHPHDLPNKAKIGFLEAYEPGWTDSHDVELSLTEPGQVGQQSTN 473

[Close]

BLAST of HG10013833 vs. TAIR 10
Match: AT3G12940.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 698.7 bits (1802), Expect = 5.9e-201
Identity = 343/473 (72.52%), Postives = 401/473 (84.78%), Query Frame = 0


Query: 397 NGLPSLGRVKLTDIAPSEGFPSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRSVLDS 456
           NG+P+LGRVK+ D+ PSEG PS+S+KL+V+TLS SLAQYSAAIIQFPA DGALLRS LDS
Sbjct: 5   NGMPTLGRVKVCDLVPSEGLPSDSYKLAVTTLSQSLAQYSAAIIQFPASDGALLRSGLDS 64

Query: 457 ARLYCHQRAAC-SSAELMQNNDSREWCRTSGYYVDAQMWQETYDYRPGLTPVEPSNGMEL 516
           ARLY HQR +  ++  ++  NDS+EWC+TSGYY D Q WQE+Y+YRPGLTP EPSN ME 
Sbjct: 65  ARLYFHQRDSYPATNNMIHTNDSQEWCKTSGYYADPQSWQESYEYRPGLTPTEPSNSMEF 124

Query: 517 QPAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSRDISSSVLSVCCYGR 576
            PAGLPDIFAL GKA+R++LDAI FYLNLRS PFTEILDNVPLR+ ++SSSVLSVCCY R
Sbjct: 125 PPAGLPDIFALLGKAARVVLDAIGFYLNLRSCPFTEILDNVPLRNCEVSSSVLSVCCYAR 184

Query: 577 PSFHGEHHHKLTAQEDSQLAMYASDHDHQIDKSLITLVKSDKAVLLIKDFNGRWILVDGD 636
           PSFHG  HH LT  ED QL +Y SDHDHQ+DKSLI+ VKSDKA L I+D +G+WILVD D
Sbjct: 185 PSFHGAQHHSLT--EDEQLILY-SDHDHQLDKSLISFVKSDKAGLHIRDMHGQWILVDVD 244

Query: 637 LGPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMTSLSCSE 696
           LGPQ+A+VYPGLALYQATAGYV+PA+ RTD+N++QGS+ GR SL+FKLMPKSMT+LSCSE
Sbjct: 245 LGPQEAVVYPGLALYQATAGYVSPAVHRTDLNSLQGSIEGRFSLAFKLMPKSMTNLSCSE 304

Query: 697 MRAAGHGVDVQFQLPVPVDDFMQRSHSTDELFNRPKFQNFSFSTSQDGSIKM--RRRKNN 756
           MRAAGHGV+ QFQLPV VDDFMQRSHS DELFNR   Q+F    SQDGS+K   +RRK++
Sbjct: 305 MRAAGHGVEAQFQLPVSVDDFMQRSHSNDELFNRQTLQSFIVPQSQDGSMKQLKKRRKSD 364

Query: 757 SSTKPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCESHIHTLDSPCASTRME 816
           S  KPLPPSKRLRLEAQRVLKE+VQ+IADKKGIKLRFCNLK+CE++ + ++SPCA+ R E
Sbjct: 365 SRCKPLPPSKRLRLEAQRVLKERVQEIADKKGIKLRFCNLKECENNHNVMNSPCANIRRE 424

Query: 817 IGWPPGVPFVHPHDLPNKAKIGFLEAYEPGWTASHDVELSLTEPGQVGQQSPN 867
           IGWP GVPFVHPHDLPNKAKIGFLE YEPGW+ +HD+E SL+E  Q  Q   N
Sbjct: 425 IGWPHGVPFVHPHDLPNKAKIGFLETYEPGWSETHDMEFSLSETAQGNQHVTN 474

[Close]

BLAST of HG10013833 vs. TAIR 10
Match: AT1G16610.1 (arginine/serine-rich 45 )

HSP 1 Score: 360.9 bits (925), Expect = 2.9e-99
Identity = 269/410 (65.61%), Postives = 312/410 (76.10%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSLSGSDSRSSSRSRSRSA---SVSRSRSRSRSISSSSS 60
           MAKPSRGRRSP           S+SGS SRSSSRSRS S+   S+SRSRSRSRS+SSSSS
Sbjct: 1   MAKPSRGRRSP-----------SVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSS 60

Query: 61  LSRSGSSRSRSPPPQRKSPTETARRTRA-SPPPAKRSSPPARKPSPVRESLVLHIDALSR 120
            SRS SS SRSPP + KSP   ARR R+  PPP+K +S P++K   V+ESLVLH+D+LSR
Sbjct: 61  PSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKK--AVQESLVLHVDSLSR 120

Query: 121 NVHE-------GNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGN 180
           NV+E       GNFGEV++VE+AMDR VNLP+G+GYVEFK R+DAEKAQ+YMDGAQIDG 
Sbjct: 121 NVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGK 180

Query: 181 VIRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKD-DMKRAREPSPRRKPP-S 240
           V++A FTLP RQK+ +PP+ V+  PKRD PK +N   DAEKD   +R RE SP+RK   S
Sbjct: 181 VVKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLS 240

Query: 241 PRRRSPVARRGGSPRRQ-PDSP-RRRPESPPRRRIESPFRRDSPPPRRRPASPMRGGRSP 300
           PRRRSP+ RRG SPRR+ PDSP RRRP SP RRR ++       PPRRRPASP RG    
Sbjct: 241 PRRRSPLPRRGLSPRRRSPDSPHRRRPGSPIRRRGDT-------PPRRRPASPSRGRSPS 300

Query: 301 SPLGRRHRSPPRPSPRRIRGSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRRSRSPIR 360
           SP  RR+RSPPR SPRRIRGSPVRRRSP P RRR+ PPRR RSPPRRSP +RRRSRSPIR
Sbjct: 301 SPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIR 360

Query: 361 RPARSRSRSFSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRV--SRSPRR 393
           RP RSRS S SPR+GR   AGRRGRSSSYS SPSPR++ R++  SRSP+R
Sbjct: 361 RPGRSRSSSISPRKGR-GPAGRRGRSSSYSSSPSPRRIPRKISRSRSPKR 388

[Close]

BLAST of HG10013833 vs. TAIR 10
Match: AT1G16610.3 (arginine/serine-rich 45 )

HSP 1 Score: 353.6 bits (906), Expect = 4.7e-97
Identity = 268/420 (63.81%), Postives = 311/420 (74.05%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSLSGSDSRSSSRSRSRSA---SVSRSRSRSRSISSSSS 60
           MAKPSRGRRSP           S+SGS SRSSSRSRS S+   S+SRSRSRSRS+SSSSS
Sbjct: 1   MAKPSRGRRSP-----------SVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSS 60

Query: 61  LSRSGSSRSRSPPPQRKSPTETARRTRA-SPPPAKRSSPPARKPSPVRESLVLHIDALSR 120
            SRS SS SRSPP + KSP   ARR R+  PPP+K +S P++K   V+ESLVLH+D+LSR
Sbjct: 61  PSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKK--AVQESLVLHVDSLSR 120

Query: 121 NVHE-------GNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGN 180
           NV+E       GNFGEV++VE+AMDR VNLP+G+GYVEFK R+DAEKAQ+YMDGAQIDG 
Sbjct: 121 NVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGK 180

Query: 181 VIRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKD-DMKRAREPSPRRKPP-S 240
           V++A FTLP RQK+ +PP+ V+  PKRD PK +N   DAEKD   +R RE SP+RK   S
Sbjct: 181 VVKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLS 240

Query: 241 PRRRSPVARRGGSPRRQ-PDSP-RRRPESPPRRRIESPFRRDSPPPRRRPASPMRGGRSP 300
           PRRRSP+ RRG SPRR+ PDSP RRRP SP RRR ++       PPRRRPASP RG    
Sbjct: 241 PRRRSPLPRRGLSPRRRSPDSPHRRRPGSPIRRRGDT-------PPRRRPASPSRGRSPS 300

Query: 301 SPLGRRHRSPPRPSPRRIRGSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRRSRSPIR 360
           SP  RR+RSPPR SPRRIRGSPVRRRSP P RRR+ PPRR RSPPRRSP +RRRSRSPIR
Sbjct: 301 SPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIR 360

Query: 361 RPARSRSRSFSPRR----------GRPAAAGRRGRSSSYSGSPSPRKVARRV--SRSPRR 393
           RP RSRS S SPR+          G    AGRRGRSSSYS SPSPR++ R++  SRSP+R
Sbjct: 361 RPGRSRSSSISPRKYVGTHLNFFLGGRGPAGRRGRSSSYSSSPSPRRIPRKISRSRSPKR 399

[Close]

BLAST of HG10013833 vs. TAIR 10
Match: AT1G16610.2 (arginine/serine-rich 45 )

HSP 1 Score: 352.8 bits (904), Expect = 8.0e-97
Identity = 264/408 (64.71%), Postives = 306/408 (75.00%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSLSGSDSRSSSRSRSRSA---SVSRSRSRSRSISSSSS 60
           MAKPSRGRRSP           S+SGS SRSSSRSRS S+   S+SRSRSRSRS+SSSSS
Sbjct: 1   MAKPSRGRRSP-----------SVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSS 60

Query: 61  LSRSGSSRSRSPPPQRKSPTETARRTRA-SPPPAKRSSPPARKPSPVRESLVLHIDALSR 120
            SRS SS SRSPP + KSP   ARR R+  PPP+K +S P++K   V+ESLVLH+D+LSR
Sbjct: 61  PSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKK--AVQESLVLHVDSLSR 120

Query: 121 NVHE-------GNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGN 180
           NV+E       GNFGEV++VE+AMDR VNLP+G+GYVEFK R+DAEKAQ+YMDGAQIDG 
Sbjct: 121 NVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGK 180

Query: 181 VIRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRAREPSPRRKPPSPR 240
           V++A FTLP RQK+ +PP+ V+  PKRD PK +N   DAEKD       P   R+  SPR
Sbjct: 181 VVKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDG-----GPRRPRERLSPR 240

Query: 241 RRSPVARRGGSPRRQ-PDSP-RRRPESPPRRRIESPFRRDSPPPRRRPASPMRGGRSPSP 300
           RRSP+ RRG SPRR+ PDSP RRRP SP RRR ++       PPRRRPASP RG    SP
Sbjct: 241 RRSPLPRRGLSPRRRSPDSPHRRRPGSPIRRRGDT-------PPRRRPASPSRGRSPSSP 300

Query: 301 LGRRHRSPPRPSPRRIRGSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRRSRSPIRRP 360
             RR+RSPPR SPRRIRGSPVRRRSP P RRR+ PPRR RSPPRRSP +RRRSRSPIRRP
Sbjct: 301 PPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRP 360

Query: 361 ARSRSRSFSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRV--SRSPRR 393
            RSRS S SPR+GR   AGRRGRSSSYS SPSPR++ R++  SRSP+R
Sbjct: 361 GRSRSSSISPRKGR-GPAGRRGRSSSYSSSPSPRRIPRKISRSRSPKR 381

[Close]

BLAST of HG10013833 vs. TAIR 10
Match: AT3G19895.1 (RING/U-box superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 8.7e-35
Identity = 113/336 (33.63%), Postives = 163/336 (48.51%), Query Frame = 0


Query: 397 NGLPSLGRVKLTDIAPSEGFPSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRSVLDS 456
           +G P L RV+L++I P EG PS  +  +V  LS SL +Y+A++I+  + D AL+R  L++
Sbjct: 56  SGTP-LARVRLSEILPYEGAPSPVYAKAVEALSVSLMRYNASVIEIGSEDTALMRCGLEA 115

Query: 457 ARLYCHQRAACSSAELMQNNDSREWCRTSGYYVDAQMWQETYDYRPGLTPVEPSNGMELQ 516
           ARLY                      RT    V  +  +    YR G +  +    ++  
Sbjct: 116 ARLY---------------------FRTRSLTVSGKGNRGLSMYRAGRSVED----LDSS 175

Query: 517 PAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSRDISSSVLSVCCYGRP 576
           P  + +IF   GK +R  L AI+ +L LRS  F  +LD+ PL   ++SSSVL +  Y   
Sbjct: 176 PPCMAEIFRCLGKVARAALSAIARHLRLRSDVFNHMLDDFPLAPNEVSSSVL-LASYAHA 235

Query: 577 SFHGEHHHKLTAQEDSQLAMYASDHDHQIDKSLITLVKSDKAVLLIKDFNGRWILVDGDL 636
           S     H        +++         +++K L+TL  SD   + + D NGRW   D   
Sbjct: 236 SIQNGKHASGGGNLSAKI---------EVEKGLLTLFCSDGTGIQVCDPNGRWYTADNGC 295

Query: 637 GPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGS-MYGRCSLSFKLMPKSMTSLSCSE 696
           G  D ++  G AL  ATAG    A  RT  +++  +   GR SL+F+LMPKS   L CS 
Sbjct: 296 GVGDLLLITGKALSHATAGLRPAASYRTTTDHLSATDTRGRASLAFRLMPKSNAILDCSP 354

Query: 697 MRAAGHGVDVQFQLPVPVDDFMQR-SHSTDELFNRP 731
           + AAGH V  Q  +PV V  FM       D L N P
Sbjct: 356 IEAAGH-VIPQSYVPVSVSQFMDNLLAENDTLVNPP 354

The following BLAST results are available for this feature:

BLAST of HG10013833 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607974.1	0.0e+00	79.10	Serine/arginine-rich splicing factor SR45, partial [Cucurbita argyrosperma subsp...	[more]
KAF9673018.1	0.0e+00	70.52	hypothetical protein SADUNF_Sadunf11G0104600 [Salix dunnii]	[more]
KAB5534851.1	6.4e-290	54.85	hypothetical protein DKX38_017937 [Salix brachista]	[more]
KAE8649785.1	5.0e-266	93.16	hypothetical protein Csa_012409 [Cucumis sativus]	[more]
XP_004144636.1	9.3e-265	96.81	uncharacterized protein LOC101216737 isoform X1 [Cucumis sativus] >XP_031740004....	[more]

BLAST of HG10013833 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEE9	4.1e-98	65.61	Serine/arginine-rich splicing factor SR45 OS=Arabidopsis thaliana OX=3702 GN=SR4...	[more]
Q28E41	9.8e-15	41.86	RNA-binding protein with serine-rich domain 1 OS=Xenopus tropicalis OX=8364 GN=r...	[more]
Q3KPW1	6.3e-14	41.09	RNA-binding protein with serine-rich domain 1-B OS=Xenopus laevis OX=8355 GN=rnp...	[more]
Q5XG24	1.1e-13	40.70	RNA-binding protein with serine-rich domain 1-A OS=Xenopus laevis OX=8355 GN=rnp...	[more]
Q15287	1.1e-13	40.70	RNA-binding protein with serine-rich domain 1 OS=Homo sapiens OX=9606 GN=RNPS1 P...	[more]

BLAST of HG10013833 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6N2MRR7	0.0e+00	72.38	RRM domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS402987 PE...	[more]
A0A5N5KXP8	3.1e-290	54.85	RRM domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_017937 PE=4...	[more]
A0A5D3CDS8	5.9e-265	94.03	2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein isoform 2 OS=C...	[more]
A0A5A7UD01	5.0e-264	94.40	2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein isoform 2 OS=C...	[more]
A0A1S3CNW5	8.5e-264	96.17	uncharacterized protein LOC103503048 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of HG10013833 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12940.1	5.9e-201	72.52	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT1G16610.1	2.9e-99	65.61	arginine/serine-rich 45	[more]
AT1G16610.3	4.7e-97	63.81	arginine/serine-rich 45	[more]
AT1G16610.2	8.0e-97	64.71	arginine/serine-rich 45	[more]
AT3G19895.1	8.7e-35	33.63	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 108..174 e-value: 4.2E-8 score: 42.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 122..172 e-value: 9.9E-9 score: 34.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 112..178 score: 11.554067
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 115..253 e-value: 7.8E-13 score: 50.6
IPR027443	Isopenicillin N synthase-like superfamily	GENE3D	2.60.120.330		coord: 418..723 e-value: 3.9E-6 score: 28.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..398
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..355
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 740..761
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..76
None	No IPR available	PANTHER	PTHR33644:SF2	2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN	coord: 397..870
None	No IPR available	PANTHER	PTHR33644	U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED	coord: 397..870
IPR034201	RNPS1, RNA recognition motif	CDD	cd12365	RRM_RNPS1	coord: 109..174 e-value: 9.55202E-29 score: 107.641
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 94..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013833.1	HG10013833.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding