HG10013821 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013821
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	TLC domain-containing protein
Location	Chr02: 5048795 .. 5055061 (+)
RNA-Seq Expression	HG10013821
Synteny	HG10013821

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACTAAAGAGCCAGGCTGAGCAACTACTTAAGTATCTTGTACTATCAGATCCTGTTGTACCATACATTTCCATTCCCGCAGGCATACTTGCTAGCAAATTGGTACCTTCCCGTCATCTATGGCTCTTTTATCTTGTTGAATGTGGGTCCCTTGCATGCGACTTTATCTTCAATGCAATCATCATGATGTTAAAAGGTTGATAATATGCTAGTAGTTAGTTTCTTCTCTTTGTGAGTTTGCATGTGAAATTCTTTTTGTTTTATTTTTTTGCCAGTCATTTGTAAATCATCCCTTGGTTCCTAGGTCTATGATCTGACTGATTTGATCAGCGGTGTTTACTTCAAGAGCTATTCTAACCTTTCTAGGATTCAGCGGGTGGAGTGGAACAACCGGTAAATGATCATTCCCTTCTTTGCATTGGTTTTATTTTTTCTTGTAATATGTTTTTTGTGTTTGCTGTTTTTACAGGGCAATGTCAACTGTCCATGCCGTTTTCATCACAGCAGCAGCATTATACATGGTGTTTCTGTCAGATCTCTATTCTGACCGATATTTTGGCCTTATTACCTTTCGCAGTTCAACAATATCTACATTTGGCCTGGGAGTAAGTGCAGTCTCTGTACTCAATTCATATATATGAGTAGGTATATTACTATAGTGTGGGAAAACTTATAATATGTTGGAAATGTTAAGAAGGGTCTGAACTTTGTCAAGCTTAAAAACCATGGAGTGGTAACAATAAAGATGGAAGATTGTCTCTTGTTCAAGCAAAAAAAAAAAAAAAAAAAAAAGATGGAGATTTTTGTTGCAGCAAGGCATCAAGGGGTAGTCTTGAAAGAATATGCCCTGATCAGTTCCTAAGGATGAGGATCGAAAGGAAATGTGTATGTTTGAAATTTAAGATTTCCAGACCTTATTTTTGGTGGAGCAGATGATGTAGATTATTAGCACTTGCCTATCAAATCTTTGGTCATATTTCCCATCGAGAGGATAAAAGTGGTATTGAGCTTTATTTATGCAGGAAGTATTGCATGGAGCTTTGGGTAGGGAGACATAGAGCAGTGTGAATGTGGCATGTTGATGACTAATACTCTTGATTGAAATAATATATAAACTGAATATGTGTTATCAAAACATCTGAAATCTATGTTGATTTTTAGATTTTGTATTCAAGGAAACATAGCACCACGATGCCTTGGCTTGGTGGTCAACGAGGATTAGTGTAAATAATAAAGGATTTAGAGGGAATAAGTTCAATATATACGCTCACCTTCTTAGGATTTTATATCTTATAAGTTCCCTTGGCAACCAAATACAGTAGTGTAAAATAGTTGTCTAGTGGCACATATATCAAGGAAAAGAAAAAAAGACAATGAAACATGGTTAAATGTTTTGCTGTGTGCTAGAGAATGATAGAAGTTTAGAATTGAGAGCATTTGAAAAACAATGCTTTGAAACCAATTTCATGATGGGGTAATTTTAATATAACCTTTATTTCTGCATAAAATATTTTTAGGATGCTTGCTTTGTTATTAGTCAGATAACATGTGGAATTTTTTGGAGATGTTACGTTGAGATAGCATTTCTAAAAAGAGAGTTGGAGCGTTGACATTCTATTATCACTTTACTCTCTCGTCCTACTCTCATCTCCTTTTCCTTCTATTACTCAATTATTCGAAAAGCTGTTCTTATTATTGTGGGATTTTAGTCTTTAGTCATTTTATTTACTTTTTGTTTTATTATATTTGAGAGAGGCCTTTTGGTTGAATTCCAAGTAGTGGGTTAAAAGGCTCTAGCACAATTCTCTGGATGACCATAGTCTTGGGTTTTCCTTTGTTTTCCAGTTTGTTAAATATTTACAAGGGGATTGGTCTAATATTTACTTTTGGGAGGATTATTGGGTGGTTGCTAAGCTCCTTTGGCTTCTTTGTGAATTTTTTCCCCACCATTATCATCTGCCTGAAAAGAGGTTTCATTCGGTCACTTCTGTTCTACGTCCCTTAGAGTCTTGTTCTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGGGAAATTTTGTTGTCCTCTCATTGTCATTGATAGTGGGTCTTCTTCTCGTATTTTTTATAAGAGGGTTTCTGTTGGGAGAAGGGATGTTCGAGTATGGCTACCTATTCCATCTAAGGGCTTTTTGTGTCGTTCTTTTTTCCTTTATTTAGGGGGCTTCAGTTTTTTCCTCTCTTTGGAAGGGTTCCTAAGAAAGTTGCTTGGTAAATATTACATGGTAGGGTGATTGGTGAACACTGGTTCTTTCATAATGGGGTAGATCCTGATGAATTCTCCCTTTCGTGACTGTCTTGTGGCAAGCTTGTTTTTGTGTATTTTATGGGGAGTGTAGCTCGAGATGTATAGTAAGATTTTTAAAGGGGTGCAAAAGTTGTGGAAGTGGTGAGGTTTAATGTGCCTTTGTGGGTGTCCGTTAATCGAATTTTTTGCTACTTTTTCACTGGTGGTTATTCTTTTGAATTGGAGTCCGTTCTTATAGTTTTTTTTTCTTTTTTTTTTTCCTCCTAAAAAGCTTGGTTTCTTATTAAGAAAATTTATATTTTTTGGGAAGAGGGAGTGGCCAACTCTGAAATGCTTTTTCTGCTGTTGGACGATCTGGAAATCTACTTCTATTCTGTTTCTCATGCACACATTTTCTAAGTTGAGCTCTCTATGCTTTAGTTGCTAATAGTAGGCCCCTACACCTACTATCAATTCCATAATAGACTTAAAATTTTGCCAACCTAAGACATAGCTTAGGGATAAAGCATAAGCTACTATCATTTCTATGATTATCATAAGATTGTTGGTTTTGGTTCAATCCTTACCCCTGTAATTATTGAACTTGGAATAGACCTAAATTTGATGACACTCCTGCAGGTGTCTGTCGGTTACTTCATAACTGATATCGGGATGATCTTTGGTTTTAATCCTGCACTTGGTGGAATGGAGTATGTAAGTGTAGTCTCCCTTTAAATTTTGCCAGTTATTGTATATTCCCGTCATCTTATCTTGTGTTCTTTAGGGGGAAATTTGTTGTTTGTAGGAGGTGACAATGTTGTTTTTTCAGGTGATACATCATCTCCTCTCTCTCTTAGCTGTGGCCTATGCTATGTTGACTGGTGAGGGGCAGCTTTACACCTACATGGTTCTCATCTCTGAGACAACTACCCCTGGGATCAATTTGAGATGGTAATTTGCTATTAATAAATTATAGGTTAAAATGCCATTTTAATCTCTGTACTTTGAAGTTTGTTCAATTTTAGTCTCTGTACTCTCAATAAAACTTAAATTTAGTCCCTACTGCACGTTCAATGTTAATTTTTTTTTAAAATTGGACAATTGAAAGTATAGGGACTAAAATGATATTGTAACCTAAATTATAATTATCAACGTGGAATAGTGTTGATTTTGACTTCAAATTTGTTCATATCTCCTTGTTGGTATAAACATGTTCAAAGGAATGGATATCTCTATGTCGTGTAAAGCATTTCCTCAAAATATAATTTTTTTTTTCTTTAAAGAAAATATTTATCTGTGCATAGGTACCTTGACACAGCTGGAATGAAGAAGTCAAAAGCATACCTCATAAATGGAGTTGTAATATTCTTCGCTTGGCTGGTGAGTCAGAAATATCTGATTATTATATATGTGTTTTTTTTTTATATATATAATTTACATTTATTTGAACAATTTAACCATGCTTTTTTTTTTTTTTTAAATAAAAAATTTTCAGGTTGCGAGAATTCTTTTGTTCATGTACATGTTTTACCATGTCTACTTACACTTGAATCAGGTATCATCAATCTCACTTTTCTTTGGCTCATAATATTCAGTCGATTATTTATTGAAGTTTTGGAATTACTATTGTTTGCTCATTGATTGGCAAAGCATTTGCCGTCTTTTTTGTGCATATGACCATATTGGTTGTACTTGCATGCATCATATGAACGATGTGCCAATATGCATATATATGTATTTGCTTGTTTAGAAATCAATTTAACCTTTTCCTTTTATACAAAAGATTTTGATATGAAATTTTTTTAAAAAAATAACAAAAATAAATTATTTTGGTCCATAAATTTTCATGAGAGTAACAATTTAGTCCCTGATTATTAGTTGGTAAAATTTTAGTCCCTGACTATTAGTTAGTAATAATTTAGTTTGTGTATTTTCAAAATTGTTTCAAGGTATTTTCTGCATTTTAGCATGTAACAATTTAGTTCTTATACTTTCAAATTTGGAACAATTTAATTTCTAAATTATGTGTCAATTTTAATTAAGGTAAGACTTGATCTTTGTAGTTTATAAACATATTTAGTCTCTATATAATCAATTTATCAATTTATGCATGTAAAATTCCATTAAATCACAATAATTATTTTTCTTATGGACTAAATTATTACAATTTTAAAGTACAAGTTGCATATTAAAGTTTAGGAACTAGATTGTTAAAAACTAAAATTCAGGGAGTAGCATTGTCACTTTCATGGAAGTAGAGGGACCAAATATGTTTTTTATTAAAAAATAATAATGATAAATGAAGAAAGAAAACTCCATCAAAATGAAGCTATAATTTTTTTTTCTCCAAAATGAGATAATAGAGCTCATTTTATAATGCACAAAGGGGAGATATATTTTTGGGGGAATTTTAAAAAATAGAAAAATAAGAGAAATTATTTACACAATAGTAAAATTTTTAGATGGTTGTGATAGACCCTGATAGAAGTCTATCAGGGCCTATCAGTGATATAAATGATGGAAGTTTATTAAGTCTATCAGTGATATAAATGATAGAAGTCTATCAATATCTATTAGCTATTTTTTGTAAATAGTTTGACATTTTTTTTTTTATCAGTAAAATTTTCAATTTTTTACATAAGATAAAGCTAGAAATAAAATAAAATAAAAAGGAGAAAAGAAAGAGACAGATTTGCCAATATGAGCCTAGAAAACGGTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGGAAGTTTAAATCAATACCATTCAAAAATAAAAGTCCAGATAAAGACTTGAGAAGTGTTTTTTCTTTTTCTCCTTGTTTTGTAACATCTTGTGATCTCTCTCTCACATCAATTCAACAATTTCCAAATTTCCCAACCCTCAGTTATGAAACATGCTATCGATTTTTGGATGCGGTGCGGGAGAGTCTGTTTATCAGAACATTTTATAAATATAGTTTTCGTATCGTTCTTTTGGGTTAGAGTCCTTTCTGGTAGTTGAGGGATCCTTTCTTAAAATAATAATAATAATAATTATTATTATTATTATTTCTGAATTTTAAATTTCAATATGAATTGCGTTATTTTTCTCTCTTTGGGGTCCATCTTATCAAGTTTTGTCGTAAACATGCAAGACCAATCATGTCTTTTTGGAGAATAATTCTGTGATCATAGCTTTGCCATTTAAATCATAGCCTCTATTCAGTCATGATTATTTTTAACATTAAATTGATATTATTTAATAATATTTAGGTTAAATTATAAATTTGGCCCCGTTTGTGAAAAGTTAGAGTTTAGTCTCCCTATGGTCTGATAAAACTTTCATTAATAGTTCCTACAATAGAGACTATTTATAAGGGTTTTATCAAACTATAGGGACTAATATTCTAGCTCTCTCCAAACCACAGTGACCAAATTTCAAATTTAACCTAATATTTAATGCCAAAACATATAATAAAGTTGGCCAAAATCTTGTGACTTGTAATGTGATATGTGTGTTATATCTAATTTTATTTTCAATGAGTTTGATGAGAAATAGACGTATTTGTCCTCATTCATAACAGCCTGCACACGGATTCGTGTCTTGATTAAACAAATGAAAAACGGTTGTTCTGAATTTGTGTAAACTAATGCACATTTCCCTTAATAATCATACACAGGTTCTTCAGATGCACGTTTTGCGGGCAAATTTATTTTCAATGAGTTTGATGAGAAATAGACGTATTTGTCCTCATTCATAACAGCCTGCACACGGATTCGTGTCTTGATTAAACAAATGAAAAACGGTTGTTCTGAATTTGTGTAAACTAATGCACATTTCCCTTAATAATCATACACAGGTTCTTCAGATGCACGTTTTCGGGCAATTTTTGGTTTTCGTGGTTCCATTGGTATTATCGGTCATGAAATTGACGTGGTTCGCTAAAATATTCAGAGGATTGAAAAAGACATTAGCAAAGAGACAATGA

mRNA sequence

ATGTCACTAAAGAGCCAGGCTGAGCAACTACTTAAGTATCTTGTACTATCAGATCCTGTTGTACCATACATTTCCATTCCCGCAGGCATACTTGCTAGCAAATTGGTCTATGATCTGACTGATTTGATCAGCGGTGTTTACTTCAAGAGCTATTCTAACCTTTCTAGGATTCAGCGGGTGGAGTGGAACAACCGGGCAATGTCAACTGTCCATGCCGTTTTCATCACAGCAGCAGCATTATACATGGTGTTTCTGTCAGATCTCTATTCTGACCGATATTTTGGCCTTATTACCTTTCGCAGTTCAACAATATCTACATTTGGCCTGGGAGTGTCTGTCGGTTACTTCATAACTGATATCGGGATGATCTTTGGTTTTAATCCTGCACTTGGTGGAATGGAGTATGTGATACATCATCTCCTCTCTCTCTTAGCTGTGGCCTATGCTATGTTGACTGGTGAGGGGCAGCTTTACACCTACATGGTTCTCATCTCTGAGACAACTACCCCTGGGATCAATTTGAGATGGTACCTTGACACAGCTGGAATGAAGAAGTCAAAAGCATACCTCATAAATGGAGTTGTAATATTCTTCGCTTGGCTGGTTCTTCAGATGCACGTTTTCGGGCAATTTTTGGTTTTCGTGGTTCCATTGGTATTATCGGTCATGAAATTGACGTGGTTCGCTAAAATATTCAGAGGATTGAAAAAGACATTAGCAAAGAGACAATGA

Coding sequence (CDS)

ATGTCACTAAAGAGCCAGGCTGAGCAACTACTTAAGTATCTTGTACTATCAGATCCTGTTGTACCATACATTTCCATTCCCGCAGGCATACTTGCTAGCAAATTGGTCTATGATCTGACTGATTTGATCAGCGGTGTTTACTTCAAGAGCTATTCTAACCTTTCTAGGATTCAGCGGGTGGAGTGGAACAACCGGGCAATGTCAACTGTCCATGCCGTTTTCATCACAGCAGCAGCATTATACATGGTGTTTCTGTCAGATCTCTATTCTGACCGATATTTTGGCCTTATTACCTTTCGCAGTTCAACAATATCTACATTTGGCCTGGGAGTGTCTGTCGGTTACTTCATAACTGATATCGGGATGATCTTTGGTTTTAATCCTGCACTTGGTGGAATGGAGTATGTGATACATCATCTCCTCTCTCTCTTAGCTGTGGCCTATGCTATGTTGACTGGTGAGGGGCAGCTTTACACCTACATGGTTCTCATCTCTGAGACAACTACCCCTGGGATCAATTTGAGATGGTACCTTGACACAGCTGGAATGAAGAAGTCAAAAGCATACCTCATAAATGGAGTTGTAATATTCTTCGCTTGGCTGGTTCTTCAGATGCACGTTTTCGGGCAATTTTTGGTTTTCGTGGTTCCATTGGTATTATCGGTCATGAAATTGACGTGGTTCGCTAAAATATTCAGAGGATTGAAAAAGACATTAGCAAAGAGACAATGA

Protein sequence

MSLKSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRVEWNNRAMSTVHAVFITAAALYMVFLSDLYSDRYFGLITFRSSTISTFGLGVSVGYFITDIGMIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDTAGMKKSKAYLINGVVIFFAWLVLQMHVFGQFLVFVVPLVLSVMKLTWFAKIFRGLKKTLAKRQ

Homology

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BLAST of HG10013821 vs. NCBI nr
Match: XP_038899443.1 (LOW QUALITY PROTEIN: TLC domain-containing protein 4-like [Benincasa hispida])

HSP 1 Score: 431.8 bits (1109), Expect = 3.9e-117
Identity = 231/263 (87.83%), Postives = 237/263 (90.11%), Query Frame = 0


Query: 1   MSLKSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRV 60
           MSLKSQAEQLLKYLVLSDP VPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRV
Sbjct: 1   MSLKSQAEQLLKYLVLSDPAVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRV 60

Query: 61  EWNNRAMSTVHAVFITAAALYMVFLSDLYSDRYFGLITFRSSTISTFGLGVSVGYFITDI 120
           EWNNRAMSTVHAVFITAAALYMVFLSDLYSDRYF L+TFRSSTISTFGLGVSVGYFITD+
Sbjct: 61  EWNNRAMSTVHAVFITAAALYMVFLSDLYSDRYFPLVTFRSSTISTFGLGVSVGYFITDL 120

Query: 121 GMIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180
           GMI  F PA+GGMEYVIHHLLSL+AVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT
Sbjct: 121 GMILWFYPAIGGMEYVIHHLLSLVAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180

Query: 181 AGMKKSKAYLINGVVIFFAWL--------------------VLQMHVFGQFLVFVVPLVL 240
           AGMKKSKAYLINGVVIFFAWL                    VLQMHVFGQFLVFVVPL+L
Sbjct: 181 AGMKKSKAYLINGVVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVPLIL 240

Query: 241 SVMKLTWFAKIFRGLKKTLAKRQ 244
           SVM LTWFAKIF+GLKKTLAKRQ
Sbjct: 241 SVMNLTWFAKIFKGLKKTLAKRQ 263

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BLAST of HG10013821 vs. NCBI nr
Match: XP_008466799.1 (PREDICTED: transmembrane protein 56-like [Cucumis melo] >XP_008466800.1 PREDICTED: transmembrane protein 56-like [Cucumis melo])

HSP 1 Score: 427.9 bits (1099), Expect = 5.7e-116
Identity = 228/263 (86.69%), Postives = 236/263 (89.73%), Query Frame = 0


Query: 1   MSLKSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRV 60
           MSLKSQAEQLLKYLVLSDPVVPYISIPAG+LASKLVYDLTDLISGVYFKSYSNLSRIQRV
Sbjct: 1   MSLKSQAEQLLKYLVLSDPVVPYISIPAGVLASKLVYDLTDLISGVYFKSYSNLSRIQRV 60

Query: 61  EWNNRAMSTVHAVFITAAALYMVFLSDLYSDRYFGLITFRSSTISTFGLGVSVGYFITDI 120
           EWNNRAMSTVHA+FITAAALYMVFLSDLYSDRYFG ITFRSSTISTFGLGVSVGYFITD+
Sbjct: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDRYFGPITFRSSTISTFGLGVSVGYFITDL 120

Query: 121 GMIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180
            MI  F PA+GGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT
Sbjct: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180

Query: 181 AGMKKSKAYLINGVVIFFAWL--------------------VLQMHVFGQFLVFVVPLVL 240
           AGMKKSKAYLING+VIFFAWL                    VLQMHVFGQ LVFVVPL+L
Sbjct: 181 AGMKKSKAYLINGIVIFFAWLVARILLFMYLFYHVYLHLNQVLQMHVFGQLLVFVVPLIL 240

Query: 241 SVMKLTWFAKIFRGLKKTLAKRQ 244
           S+M LTWF+KIFRGLKKTLAKRQ
Sbjct: 241 SIMNLTWFSKIFRGLKKTLAKRQ 263

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BLAST of HG10013821 vs. NCBI nr
Match: XP_011653984.1 (TLC domain-containing protein 4 [Cucumis sativus] >KGN55433.2 hypothetical protein Csa_012466 [Cucumis sativus])

HSP 1 Score: 415.6 bits (1067), Expect = 2.9e-112
Identity = 221/263 (84.03%), Postives = 233/263 (88.59%), Query Frame = 0


Query: 1   MSLKSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRV 60
           MSLKSQA +LLKYLVLSDPVVPYISIPAG+LASKLVYDLTD+IS VYFKSYSNLSRIQRV
Sbjct: 1   MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 60

Query: 61  EWNNRAMSTVHAVFITAAALYMVFLSDLYSDRYFGLITFRSSTISTFGLGVSVGYFITDI 120
           EWNNRAMSTVHA+FITAAALYMVFLSDLYSD+YFG ITFR+STISTFGLGVSVGYFITD+
Sbjct: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 120

Query: 121 GMIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180
            MI  F PA+GGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT
Sbjct: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180

Query: 181 AGMKKSKAYLINGVVIFFAWL--------------------VLQMHVFGQFLVFVVPLVL 240
           AGMKKSKAYLING+VIFFAWL                    VLQMHVFGQFLVFVVP +L
Sbjct: 181 AGMKKSKAYLINGIVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVPSIL 240

Query: 241 SVMKLTWFAKIFRGLKKTLAKRQ 244
            +M LTWF+KIFRGLKKTLAKRQ
Sbjct: 241 WIMNLTWFSKIFRGLKKTLAKRQ 263

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BLAST of HG10013821 vs. NCBI nr
Match: XP_022940088.1 (transmembrane protein 56-like [Cucurbita moschata] >XP_022940089.1 transmembrane protein 56-like [Cucurbita moschata] >XP_022940090.1 transmembrane protein 56-like [Cucurbita moschata] >XP_022940091.1 transmembrane protein 56-like [Cucurbita moschata] >XP_022940092.1 transmembrane protein 56-like [Cucurbita moschata] >XP_023525630.1 transmembrane protein 56-like [Cucurbita pepo subsp. pepo] >XP_023525631.1 transmembrane protein 56-like [Cucurbita pepo subsp. pepo] >XP_023525633.1 transmembrane protein 56-like [Cucurbita pepo subsp. pepo] >XP_023525634.1 transmembrane protein 56-like [Cucurbita pepo subsp. pepo] >XP_023525635.1 transmembrane protein 56-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 415.6 bits (1067), Expect = 2.9e-112
Identity = 223/262 (85.11%), Postives = 232/262 (88.55%), Query Frame = 0


Query: 2   SLKSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRVE 61
           S +SQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQR+E
Sbjct: 5   SYQSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRME 64

Query: 62  WNNRAMSTVHAVFITAAALYMVFLSDLYSDRYFGLITFRSSTISTFGLGVSVGYFITDIG 121
           WNNRAMST+HA+FITAA+LYMVFLSDLYSDRYFG ITFRSSTISTF LGVSVGYFITD+G
Sbjct: 65  WNNRAMSTLHAIFITAASLYMVFLSDLYSDRYFGFITFRSSTISTFCLGVSVGYFITDLG 124

Query: 122 MIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDTA 181
           MI  F P+LGGMEYVIHHLLSL+AVAYAMLTGEGQLYT+MVLISETTTPGINLRWYLDTA
Sbjct: 125 MISWFYPSLGGMEYVIHHLLSLVAVAYAMLTGEGQLYTFMVLISETTTPGINLRWYLDTA 184

Query: 182 GMKKSKAYLINGVVIFFAWL--------------------VLQMHVFGQFLVFVVPLVLS 241
           GMKKSKAYLINGVVIFFAWL                    VLQMH FGQ LVFVVPLVLS
Sbjct: 185 GMKKSKAYLINGVVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHAFGQLLVFVVPLVLS 244

Query: 242 VMKLTWFAKIFRGLKKTLAKRQ 244
           VM L WFAKIFRGLKKTLAKRQ
Sbjct: 245 VMNLMWFAKIFRGLKKTLAKRQ 266

[Close]

BLAST of HG10013821 vs. NCBI nr
Match: KAG6607986.1 (TLC domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 415.6 bits (1067), Expect = 2.9e-112
Identity = 223/262 (85.11%), Postives = 232/262 (88.55%), Query Frame = 0


Query: 2   SLKSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRVE 61
           S +SQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQR+E
Sbjct: 77  SYQSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRME 136

Query: 62  WNNRAMSTVHAVFITAAALYMVFLSDLYSDRYFGLITFRSSTISTFGLGVSVGYFITDIG 121
           WNNRAMST+HA+FITAA+LYMVFLSDLYSDRYFG ITFRSSTISTF LGVSVGYFITD+G
Sbjct: 137 WNNRAMSTLHAIFITAASLYMVFLSDLYSDRYFGFITFRSSTISTFCLGVSVGYFITDLG 196

Query: 122 MIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDTA 181
           MI  F P+LGGMEYVIHHLLSL+AVAYAMLTGEGQLYT+MVLISETTTPGINLRWYLDTA
Sbjct: 197 MISWFYPSLGGMEYVIHHLLSLVAVAYAMLTGEGQLYTFMVLISETTTPGINLRWYLDTA 256

Query: 182 GMKKSKAYLINGVVIFFAWL--------------------VLQMHVFGQFLVFVVPLVLS 241
           GMKKSKAYLINGVVIFFAWL                    VLQMH FGQ LVFVVPLVLS
Sbjct: 257 GMKKSKAYLINGVVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHAFGQLLVFVVPLVLS 316

Query: 242 VMKLTWFAKIFRGLKKTLAKRQ 244
           VM L WFAKIFRGLKKTLAKRQ
Sbjct: 317 VMNLMWFAKIFRGLKKTLAKRQ 338

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BLAST of HG10013821 vs. ExPASy Swiss-Prot
Match: Q6PGS5 (TLC domain-containing protein 4-B OS=Xenopus laevis OX=8355 GN=tlcd4-b PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.3e-11
Identity = 64/249 (25.70%), Postives = 116/249 (46.59%), Query Frame = 0


Query: 19  PVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRVEWNNRAMSTVHAVFITAA 78
           P+  +IS+ +  +   L +  +  +S      +  LS  Q++EWN+R +S+ HA+ +   
Sbjct: 6   PLTVFISVTSLAVFQFLFHVGSSWLSTRLTGGFHKLSARQKIEWNSRTVSSFHALVVGCF 65

Query: 79  ALYMVFLSDLYSDRYFGLITFRSSTISTFGLGVSVGYFITDIGMIFGFNPALGGMEYVIH 138
            LY++    +Y D       +    +    + V+ GY I+D+ +I  +   +G   +V H
Sbjct: 66  CLYIL----VYDDAVNADPVWGDPFMVKLNVAVTSGYLISDLLLIIYYWKEIGDKYFVTH 125

Query: 139 HLLSLLAVAYAMLTGEGQL--YTYMVLISETTTPGINLRWYLDTAGMKK-SKAYLINGVV 198
           HL +L A  Y +  GEG L  +    LI+E +TP +N RW+ +  G  K S   ++NGV+
Sbjct: 126 HLAALYACYYVL--GEGMLPYFGNFRLIAEFSTPFVNQRWFFEVLGYSKYSLPNMVNGVL 185

Query: 199 IFFAWLVLQMHV-----------FG-----------QFLVFVVPLVLSVMKLTWFAKIFR 243
           +  ++ ++++ V           FG           Q    +  + L +M + W  KI +
Sbjct: 186 MTISFFIVRIAVIPIYYGRVFSTFGTEAFHRLGLGAQCAWIISSVSLDIMNVMWMIKIAK 245

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BLAST of HG10013821 vs. ExPASy Swiss-Prot
Match: Q550S9 (TLC domain-containing protein 4 B OS=Dictyostelium discoideum OX=44689 GN=tlcd4b PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.4e-10
Identity = 52/188 (27.66%), Postives = 97/188 (51.60%), Query Frame = 0


Query: 20  VVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRVEWNNRAMSTVHAVFITAAA 79
           V+ Y  +P  +L + L   L  +I  ++ K+       +R+EW NR +STV+A+  +A +
Sbjct: 7   VILYQDLPCFLLFTSLHLFLPKIIEIIFKKNNIGFYERKRIEWPNRIISTVNAIVTSALS 66

Query: 80  LYMVFLSDLYSDRYFGLITFRSSTISTFGLGVSVGYFITDIGMIFGFNPALGGMEYVIHH 139
           +Y      LY + +       +S +S F       YFI D  +   ++  L     ++HH
Sbjct: 67  IYC-----LYYNEWIVNSLRSTSEMSYFIFKFITYYFIYDFIISSYYSKYLFTWGNLLHH 126

Query: 140 LLSLLAVAYAMLTGEGQLYTYMV--LISETTTPGINLRWYLDTAGMKKSKAYLINGVVIF 199
            ++LL  ++  L G+G  +  ++    +E TTP INLR++L    +K    Y+ING++IF
Sbjct: 127 TIALL--SFTFLGGKGLAHHLLLSYTFTEITTPLINLRFFLLDLNLKNHPLYVINGLLIF 186

Query: 200 FAWLVLQM 206
             +++ ++
Sbjct: 187 VGFVLFRV 187

[Close]

BLAST of HG10013821 vs. ExPASy Swiss-Prot
Match: Q6GLX2 (TLC domain-containing protein 4-A OS=Xenopus laevis OX=8355 GN=tlcd4-a PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-09
Identity = 59/249 (23.69%), Postives = 111/249 (44.58%), Query Frame = 0


Query: 16  LSDPVVPYISIPAGILASKLVYD-LTDLISGVYFKSYSNLSRIQRVEWNNRAMSTVHAVF 75
           + D ++ Y  +    L  +L++  ++  +   Y  +Y  LS  ++ EW++R +ST HA+ 
Sbjct: 1   MDDVLISYCVVTGSFLGFQLLFSAISPRLFTKYSSTYRQLSFGKQCEWDSRFVSTNHALI 60

Query: 76  ITAAALYMVFLSD-LYSDRYFGLITFRSSTISTFGLGVSVGYFITDIGMIFGFNPALGGM 135
           + +A LY++   D + +D  +G             + ++ GY + D+ ++  F   +   
Sbjct: 61  VGSACLYILAYDDAVNADPIWG-----DPFWVKMNVAITCGYLVQDLLLLARFWKVMRDP 120

Query: 136 EYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDTAGMKKSK-AYLIN 195
             V HHL    +  Y +  G    +    LISE +TP +N RW+ D  G  +S    L+N
Sbjct: 121 YMVCHHLAVFYSYGYVLNRGVLPYFANFRLISELSTPFVNQRWFFDVIGKPRSSWPVLLN 180

Query: 196 GVVIFFAWLVLQMHV-----------FG-----------QFLVFVVPLVLSVMKLTWFAK 240
           G+ +   + ++++ V           FG           Q    V  +VL ++ + W  K
Sbjct: 181 GLAMALVFFIVRIAVIPSYYSQVFATFGTEGYIRLGIGPQVAWIVSCVVLDILNVFWMYK 240

[Close]

BLAST of HG10013821 vs. ExPASy Swiss-Prot
Match: Q5XIY2 (TLC domain-containing protein 4-B OS=Danio rerio OX=7955 GN=tlcd4b PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 54/225 (24.00%), Postives = 101/225 (44.89%), Query Frame = 0


Query: 39  LTDLISGVYFKSYSNLSRIQRVEWNNRAMSTVHAVFITAAALYMVFLSD-LYSDRYFGLI 98
           ++ ++S  + + Y  L   +  +WN+R +STVHA+ +    LY+++  D +  D  +G  
Sbjct: 23  VSPVLSSNFTQGYGKLPPNKLNDWNSRLVSTVHALIVGLFCLYILWYDDAVNEDPVWG-- 82

Query: 99  TFRSSTISTFGLGVSVGYFITDIGMIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQL 158
                 +    + ++ GY   D+ ++      +G + +V HHL +L A  Y +  G    
Sbjct: 83  ---DPNLVKLNVAITCGYLFYDLLLLACNWSTMGDVFFVCHHLAALYAYGYVLTRGVLPY 142

Query: 159 YTYMVLISETTTPGINLRWYLDTAGMKKSKAYLI-NGV---VIFFAWLVLQM-----HVF 218
           +    LISE +TP +N RW+ +     ++   ++ NG+   V+FF   +  M      VF
Sbjct: 143 FANFRLISELSTPFVNQRWFFEALAYPRTHQLVVANGIAMAVVFFLVRIAVMPPYWAKVF 202

Query: 219 G--------------QFLVFVVPLVLSVMKLTWFAKIFRGLKKTL 240
           G              Q    +  + L ++ + W  KI RG  K +
Sbjct: 203 GIIYSPTFEKLGLAIQVAWIISCVCLDILNIIWMYKIARGCYKVI 242

[Close]

BLAST of HG10013821 vs. ExPASy Swiss-Prot
Match: Q6P4N1 (TLC domain-containing protein 4 OS=Xenopus tropicalis OX=8364 GN=tlcd4 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.3e-08
Identity = 53/217 (24.42%), Postives = 96/217 (44.24%), Query Frame = 0


Query: 47  YFKSYSNLSRIQRVEWNNRAMSTVHAVFITAAALYMVFLSD-LYSDRYFGLITFRSSTIS 106
           Y  +Y  LS  ++ EW++R +ST HA+ + +  LY++   + + +D  +G          
Sbjct: 34  YSSTYRQLSFGKQCEWDSRCVSTTHALVVGSGCLYILAYDEAVNADPIWG-----DPFWV 93

Query: 107 TFGLGVSVGYFITDIGMIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLIS 166
              + ++ GY + D+ ++  F   +     V HHL    +  Y +  G    +    LIS
Sbjct: 94  KMNVAITCGYLVHDLLLLARFWKVMRDPYMVCHHLAVFYSYGYVLNRGVLPYFANFRLIS 153

Query: 167 ETTTPGINLRWYLDTAGMKKSK-AYLINGVVIFFAWLVLQMHV-----------FG---- 226
           E +TP +N RW+ D  G  +S    L+NG+ +   + ++++ V           FG    
Sbjct: 154 ELSTPFVNQRWFFDVIGKPRSSWPVLLNGLAMALVFFIVRIAVIPSYYSQVFATFGTEGY 213

Query: 227 -------QFLVFVVPLVLSVMKLTWFAKIFRGLKKTL 240
                  Q    V  +VL ++ + W  KI RG  K +
Sbjct: 214 IRLGIGPQVAWIVSCVVLDILNVFWMYKIARGFYKVV 245

[Close]

BLAST of HG10013821 vs. ExPASy TrEMBL
Match: A0A1S3CS93 (transmembrane protein 56-like OS=Cucumis melo OX=3656 GN=LOC103504121 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.7e-116
Identity = 228/263 (86.69%), Postives = 236/263 (89.73%), Query Frame = 0


Query: 1   MSLKSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRV 60
           MSLKSQAEQLLKYLVLSDPVVPYISIPAG+LASKLVYDLTDLISGVYFKSYSNLSRIQRV
Sbjct: 1   MSLKSQAEQLLKYLVLSDPVVPYISIPAGVLASKLVYDLTDLISGVYFKSYSNLSRIQRV 60

Query: 61  EWNNRAMSTVHAVFITAAALYMVFLSDLYSDRYFGLITFRSSTISTFGLGVSVGYFITDI 120
           EWNNRAMSTVHA+FITAAALYMVFLSDLYSDRYFG ITFRSSTISTFGLGVSVGYFITD+
Sbjct: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDRYFGPITFRSSTISTFGLGVSVGYFITDL 120

Query: 121 GMIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180
            MI  F PA+GGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT
Sbjct: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180

Query: 181 AGMKKSKAYLINGVVIFFAWL--------------------VLQMHVFGQFLVFVVPLVL 240
           AGMKKSKAYLING+VIFFAWL                    VLQMHVFGQ LVFVVPL+L
Sbjct: 181 AGMKKSKAYLINGIVIFFAWLVARILLFMYLFYHVYLHLNQVLQMHVFGQLLVFVVPLIL 240

Query: 241 SVMKLTWFAKIFRGLKKTLAKRQ 244
           S+M LTWF+KIFRGLKKTLAKRQ
Sbjct: 241 SIMNLTWFSKIFRGLKKTLAKRQ 263

[Close]

BLAST of HG10013821 vs. ExPASy TrEMBL
Match: A0A0A0L1M1 (TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G614180 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.6e-116
Identity = 221/243 (90.95%), Postives = 233/243 (95.88%), Query Frame = 0


Query: 1   MSLKSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRV 60
           MSLKSQA +LLKYLVLSDPVVPYISIPAG+LASKLVYDLTD+IS VYFKSYSNLSRIQRV
Sbjct: 1   MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 60

Query: 61  EWNNRAMSTVHAVFITAAALYMVFLSDLYSDRYFGLITFRSSTISTFGLGVSVGYFITDI 120
           EWNNRAMSTVHA+FITAAALYMVFLSDLYSD+YFG ITFR+STISTFGLGVSVGYFITD+
Sbjct: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 120

Query: 121 GMIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180
            MI  F PA+GGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT
Sbjct: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180

Query: 181 AGMKKSKAYLINGVVIFFAWLVLQMHVFGQFLVFVVPLVLSVMKLTWFAKIFRGLKKTLA 240
           AGMKKSKAYLING+VIFFAWLVLQMHVFGQFLVFVVP +L +M LTWF+KIFRGLKKTLA
Sbjct: 181 AGMKKSKAYLINGIVIFFAWLVLQMHVFGQFLVFVVPSILWIMNLTWFSKIFRGLKKTLA 240

Query: 241 KRQ 244
           KRQ
Sbjct: 241 KRQ 243

[Close]

BLAST of HG10013821 vs. ExPASy TrEMBL
Match: A0A6J1FJ18 (transmembrane protein 56-like OS=Cucurbita moschata OX=3662 GN=LOC111445812 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.4e-112
Identity = 223/262 (85.11%), Postives = 232/262 (88.55%), Query Frame = 0


Query: 2   SLKSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRVE 61
           S +SQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQR+E
Sbjct: 5   SYQSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRME 64

Query: 62  WNNRAMSTVHAVFITAAALYMVFLSDLYSDRYFGLITFRSSTISTFGLGVSVGYFITDIG 121
           WNNRAMST+HA+FITAA+LYMVFLSDLYSDRYFG ITFRSSTISTF LGVSVGYFITD+G
Sbjct: 65  WNNRAMSTLHAIFITAASLYMVFLSDLYSDRYFGFITFRSSTISTFCLGVSVGYFITDLG 124

Query: 122 MIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDTA 181
           MI  F P+LGGMEYVIHHLLSL+AVAYAMLTGEGQLYT+MVLISETTTPGINLRWYLDTA
Sbjct: 125 MISWFYPSLGGMEYVIHHLLSLVAVAYAMLTGEGQLYTFMVLISETTTPGINLRWYLDTA 184

Query: 182 GMKKSKAYLINGVVIFFAWL--------------------VLQMHVFGQFLVFVVPLVLS 241
           GMKKSKAYLINGVVIFFAWL                    VLQMH FGQ LVFVVPLVLS
Sbjct: 185 GMKKSKAYLINGVVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHAFGQLLVFVVPLVLS 244

Query: 242 VMKLTWFAKIFRGLKKTLAKRQ 244
           VM L WFAKIFRGLKKTLAKRQ
Sbjct: 245 VMNLMWFAKIFRGLKKTLAKRQ 266

[Close]

BLAST of HG10013821 vs. ExPASy TrEMBL
Match: A0A6J1J4U4 (transmembrane protein 56-like OS=Cucurbita maxima OX=3661 GN=LOC111481269 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 4.1e-112
Identity = 222/262 (84.73%), Postives = 232/262 (88.55%), Query Frame = 0


Query: 2   SLKSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRVE 61
           S +SQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQR+E
Sbjct: 5   SYQSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRME 64

Query: 62  WNNRAMSTVHAVFITAAALYMVFLSDLYSDRYFGLITFRSSTISTFGLGVSVGYFITDIG 121
           WNNRAMST+HA+FITAA+LY+VFLSDLYSDRYFG ITFRSSTISTF LGVSVGYFITD+G
Sbjct: 65  WNNRAMSTLHAIFITAASLYVVFLSDLYSDRYFGFITFRSSTISTFCLGVSVGYFITDLG 124

Query: 122 MIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDTA 181
           MI  F P+LGGMEYVIHHLLSL+AVAYAMLTGEGQLYT+MVLISETTTPGINLRWYLDTA
Sbjct: 125 MISWFYPSLGGMEYVIHHLLSLVAVAYAMLTGEGQLYTFMVLISETTTPGINLRWYLDTA 184

Query: 182 GMKKSKAYLINGVVIFFAWL--------------------VLQMHVFGQFLVFVVPLVLS 241
           GMKKSKAYLINGVVIFFAWL                    VLQMH FGQ LVFVVPLVLS
Sbjct: 185 GMKKSKAYLINGVVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHAFGQLLVFVVPLVLS 244

Query: 242 VMKLTWFAKIFRGLKKTLAKRQ 244
           VM L WFAKIFRGLKKTLAKRQ
Sbjct: 245 VMNLMWFAKIFRGLKKTLAKRQ 266

[Close]

BLAST of HG10013821 vs. ExPASy TrEMBL
Match: A0A6J1IGT7 (transmembrane protein 56-like OS=Cucurbita maxima OX=3661 GN=LOC111477092 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 7.7e-111
Identity = 218/262 (83.21%), Postives = 228/262 (87.02%), Query Frame = 0


Query: 2   SLKSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRVE 61
           S +SQAEQLLKYLVLSDPVVPYISIPAGILASKLVYD+TDLISGVYFKSYSNLSRIQRVE
Sbjct: 5   SYQSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDVTDLISGVYFKSYSNLSRIQRVE 64

Query: 62  WNNRAMSTVHAVFITAAALYMVFLSDLYSDRYFGLITFRSSTISTFGLGVSVGYFITDIG 121
           WNNRAMST+HA+FITAA+LYMVFLSDL+SDRYFGLITFRSST+S FGLGVS GYF TD+G
Sbjct: 65  WNNRAMSTLHAIFITAASLYMVFLSDLFSDRYFGLITFRSSTVSAFGLGVSAGYFFTDLG 124

Query: 122 MIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDTA 181
           MI  F P LGGMEYV+HHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDTA
Sbjct: 125 MILWFYPTLGGMEYVLHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDTA 184

Query: 182 GMKKSKAYLINGVVIFFAWL--------------------VLQMHVFGQFLVFVVPLVLS 241
           GMKKSKAYLINGVVIFFAWL                    VLQMH FGQ LVFVVPLVLS
Sbjct: 185 GMKKSKAYLINGVVIFFAWLVARILLFMYMFYHVYFHLNQVLQMHAFGQLLVFVVPLVLS 244

Query: 242 VMKLTWFAKIFRGLKKTLAKRQ 244
           VM   WFA IF+GLKKTLAKRQ
Sbjct: 245 VMNCMWFAIIFKGLKKTLAKRQ 266

[Close]

BLAST of HG10013821 vs. TAIR 10
Match: AT4G19645.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 292.7 bits (748), Expect = 2.7e-79
Identity = 154/264 (58.33%), Postives = 192/264 (72.73%), Query Frame = 0


Query: 2   SLKSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRVE 61
           S ++QAE  +++ +L+DP +PY S+  GI   KLVYDLT+L S ++ KSYS L++I+R+E
Sbjct: 5   SYQNQAEYFVEHYLLADPFLPYTSVLVGICLCKLVYDLTELFSSIHVKSYSALTKIKRIE 64

Query: 62  WNNRAMSTVHAVFITAAALYMVFLSDLYSDR--YFGLITFRSSTISTFGLGVSVGYFITD 121
           WNNR +STVHA+FI+  ALY  F SDL+SD+     L  FR+S +STFGLGVSVGYF+ D
Sbjct: 65  WNNRGISTVHAIFISFMALYFAFFSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGYFLAD 124

Query: 122 IGMIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLD 181
           +GMIF   P+LGG EY++HH LS  AVAY++ +GE QLYTYMVLISE TTP INLRWYLD
Sbjct: 125 LGMIFWLYPSLGGSEYILHHCLSGTAVAYSLFSGEAQLYTYMVLISEVTTPEINLRWYLD 184

Query: 182 TAGMKKSKAYLINGVVIFFAWL--------------------VLQMHVFGQFLVFVVPLV 241
            AG+K+SKAYL+NGV IFFAWL                    V++MH FG  LVFVVP+ 
Sbjct: 185 IAGLKRSKAYLVNGVAIFFAWLTARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFVVPIS 244

Query: 242 LSVMKLTWFAKIFRGLKKTLAKRQ 244
           LSVM L WF KI +GLKKTL KRQ
Sbjct: 245 LSVMNLIWFGKIVKGLKKTLEKRQ 268

[Close]

BLAST of HG10013821 vs. TAIR 10
Match: AT4G19645.2 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 292.7 bits (748), Expect = 2.7e-79
Identity = 154/264 (58.33%), Postives = 192/264 (72.73%), Query Frame = 0


Query: 2   SLKSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRVE 61
           S ++QAE  +++ +L+DP +PY S+  GI   KLVYDLT+L S ++ KSYS L++I+R+E
Sbjct: 5   SYQNQAEYFVEHYLLADPFLPYTSVLVGICLCKLVYDLTELFSSIHVKSYSALTKIKRIE 64

Query: 62  WNNRAMSTVHAVFITAAALYMVFLSDLYSDR--YFGLITFRSSTISTFGLGVSVGYFITD 121
           WNNR +STVHA+FI+  ALY  F SDL+SD+     L  FR+S +STFGLGVSVGYF+ D
Sbjct: 65  WNNRGISTVHAIFISFMALYFAFFSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGYFLAD 124

Query: 122 IGMIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLD 181
           +GMIF   P+LGG EY++HH LS  AVAY++ +GE QLYTYMVLISE TTP INLRWYLD
Sbjct: 125 LGMIFWLYPSLGGSEYILHHCLSGTAVAYSLFSGEAQLYTYMVLISEVTTPEINLRWYLD 184

Query: 182 TAGMKKSKAYLINGVVIFFAWL--------------------VLQMHVFGQFLVFVVPLV 241
            AG+K+SKAYL+NGV IFFAWL                    V++MH FG  LVFVVP+ 
Sbjct: 185 IAGLKRSKAYLVNGVAIFFAWLTARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFVVPIS 244

Query: 242 LSVMKLTWFAKIFRGLKKTLAKRQ 244
           LSVM L WF KI +GLKKTL KRQ
Sbjct: 245 LSVMNLIWFGKIVKGLKKTLEKRQ 268

[Close]

BLAST of HG10013821 vs. TAIR 10
Match: AT1G31300.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 284.6 bits (727), Expect = 7.2e-77
Identity = 150/262 (57.25%), Postives = 189/262 (72.14%), Query Frame = 0


Query: 2   SLKSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRVE 61
           S   QA+ L+K  +L+DP +PY S+  GI   K+VYDL   IS  + K+Y  L++IQR+E
Sbjct: 14  SYHHQAQHLVKNYLLADPFIPYTSVLTGIFLCKVVYDLCHFISNSHSKTYIILTKIQRIE 73

Query: 62  WNNRAMSTVHAVFITAAALYMVFLSDLYSDRYFG-LITFRSSTISTFGLGVSVGYFITDI 121
           WNNR +STVHA+FI+A +LY VF SDL+SDR+   L+ FRSS +S+ GLG+S+GYF+ D+
Sbjct: 74  WNNRGISTVHAIFISAMSLYFVFWSDLFSDRWHNDLVVFRSSRLSSLGLGISIGYFLADL 133

Query: 122 GMIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 181
           GMIF   P+LGG+EY++HH LS +AVAY++ +GEGQLYTYMVLISE TTP INLRWYLDT
Sbjct: 134 GMIFWKYPSLGGIEYIVHHSLSGVAVAYSLFSGEGQLYTYMVLISEITTPEINLRWYLDT 193

Query: 182 AGMKKSKAYLINGVVIFFAWL--------------------VLQMHVFGQFLVFVVPLVL 241
           AGMKKS AY++NGV IF AWL                    V++MH+FG  LVF VP  L
Sbjct: 194 AGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVMRMHIFGYVLVFGVPAAL 253

Query: 242 SVMKLTWFAKIFRGLKKTLAKR 243
            VM L WF KI RG+KKTLAKR
Sbjct: 254 GVMNLIWFGKIVRGVKKTLAKR 275

[Close]

BLAST of HG10013821 vs. TAIR 10
Match: AT1G31300.2 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 284.6 bits (727), Expect = 7.2e-77
Identity = 150/262 (57.25%), Postives = 189/262 (72.14%), Query Frame = 0


Query: 2   SLKSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRVE 61
           S   QA+ L+K  +L+DP +PY S+  GI   K+VYDL   IS  + K+Y  L++IQR+E
Sbjct: 14  SYHHQAQHLVKNYLLADPFIPYTSVLTGIFLCKVVYDLCHFISNSHSKTYIILTKIQRIE 73

Query: 62  WNNRAMSTVHAVFITAAALYMVFLSDLYSDRYFG-LITFRSSTISTFGLGVSVGYFITDI 121
           WNNR +STVHA+FI+A +LY VF SDL+SDR+   L+ FRSS +S+ GLG+S+GYF+ D+
Sbjct: 74  WNNRGISTVHAIFISAMSLYFVFWSDLFSDRWHNDLVVFRSSRLSSLGLGISIGYFLADL 133

Query: 122 GMIFGFNPALGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 181
           GMIF   P+LGG+EY++HH LS +AVAY++ +GEGQLYTYMVLISE TTP INLRWYLDT
Sbjct: 134 GMIFWKYPSLGGIEYIVHHSLSGVAVAYSLFSGEGQLYTYMVLISEITTPEINLRWYLDT 193

Query: 182 AGMKKSKAYLINGVVIFFAWL--------------------VLQMHVFGQFLVFVVPLVL 241
           AGMKKS AY++NGV IF AWL                    V++MH+FG  LVF VP  L
Sbjct: 194 AGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVMRMHIFGYVLVFGVPAAL 253

Query: 242 SVMKLTWFAKIFRGLKKTLAKR 243
            VM L WF KI RG+KKTLAKR
Sbjct: 254 GVMNLIWFGKIVRGVKKTLAKR 275

[Close]

BLAST of HG10013821 vs. TAIR 10
Match: AT4G10360.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 189.5 bits (480), Expect = 3.2e-48
Identity = 102/238 (42.86%), Postives = 145/238 (60.92%), Query Frame = 0


Query: 25  SIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRVEWNNRAMSTVHAVFITAAALYMVF 84
           SI +G L  K+VYDLT  IS + F  Y  L    R+EWNNR  ST HAVF + A++Y + 
Sbjct: 20  SICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNRGFSTFHAVFTSVASIYFLV 79

Query: 85  LSDLYSDRYFGLITFRSST-ISTFGLGVSVGYFITDIGMIFGFNPALGGMEYVIHHLLSL 144
           +SD + +   G     S+T +S   +G+S+GYF+ D+ MIF + P LGG+EYV HH LS+
Sbjct: 80  ISDQFDENVHGDSVINSTTRLSESVMGISLGYFLADLAMIFWYFPTLGGIEYVFHHFLSM 139

Query: 145 LAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDTAGMKKSKAYLINGVVIFFAWLVL 204
            A+  ++ +G+ Q Y ++VL+SE TTP +NLRWYLD +G K SKAY +NG+ +F  WLV 
Sbjct: 140 FAIILSVTSGQSQFYIFLVLLSEATTPFVNLRWYLDNSGQKGSKAYTLNGIALFLGWLVA 199

Query: 205 QMHVF--------------------GQFLVFVVPLVLSVMKLTWFAKIFRGLKKTLAK 242
           ++ +F                    G + +  +P  L+VM L WF KI +GL KTL+K
Sbjct: 200 RVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMNLLWFWKITKGLIKTLSK 257

The following BLAST results are available for this feature:

BLAST of HG10013821 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899443.1	3.9e-117	87.83	LOW QUALITY PROTEIN: TLC domain-containing protein 4-like [Benincasa hispida]	[more]
XP_008466799.1	5.7e-116	86.69	PREDICTED: transmembrane protein 56-like [Cucumis melo] >XP_008466800.1 PREDICTE...	[more]
XP_011653984.1	2.9e-112	84.03	TLC domain-containing protein 4 [Cucumis sativus] >KGN55433.2 hypothetical prote...	[more]
XP_022940088.1	2.9e-112	85.11	transmembrane protein 56-like [Cucurbita moschata] >XP_022940089.1 transmembrane...	[more]
KAG6607986.1	2.9e-112	85.11	TLC domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of HG10013821 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6PGS5	2.3e-11	25.70	TLC domain-containing protein 4-B OS=Xenopus laevis OX=8355 GN=tlcd4-b PE=2 SV=1	[more]
Q550S9	7.4e-10	27.66	TLC domain-containing protein 4 B OS=Dictyostelium discoideum OX=44689 GN=tlcd4b...	[more]
Q6GLX2	1.7e-09	23.69	TLC domain-containing protein 4-A OS=Xenopus laevis OX=8355 GN=tlcd4-a PE=2 SV=1	[more]
Q5XIY2	1.1e-08	24.00	TLC domain-containing protein 4-B OS=Danio rerio OX=7955 GN=tlcd4b PE=2 SV=1	[more]
Q6P4N1	5.3e-08	24.42	TLC domain-containing protein 4 OS=Xenopus tropicalis OX=8364 GN=tlcd4 PE=2 SV=1	[more]

BLAST of HG10013821 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CS93	2.7e-116	86.69	transmembrane protein 56-like OS=Cucumis melo OX=3656 GN=LOC103504121 PE=4 SV=1	[more]
A0A0A0L1M1	3.6e-116	90.95	TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G614180 PE=4 SV...	[more]
A0A6J1FJ18	1.4e-112	85.11	transmembrane protein 56-like OS=Cucurbita moschata OX=3662 GN=LOC111445812 PE=4...	[more]
A0A6J1J4U4	4.1e-112	84.73	transmembrane protein 56-like OS=Cucurbita maxima OX=3661 GN=LOC111481269 PE=4 S...	[more]
A0A6J1IGT7	7.7e-111	83.21	transmembrane protein 56-like OS=Cucurbita maxima OX=3661 GN=LOC111477092 PE=4 S...	[more]

BLAST of HG10013821 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19645.1	2.7e-79	58.33	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT4G19645.2	2.7e-79	58.33	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT1G31300.1	7.2e-77	57.25	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT1G31300.2	7.2e-77	57.25	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT4G10360.1	3.2e-48	42.86	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	SMART	SM00724	lag1_27	coord: 57..240 e-value: 9.8E-21 score: 84.9
IPR006634	TRAM/LAG1/CLN8 homology domain	PFAM	PF03798	TRAM_LAG1_CLN8	coord: 61..202 e-value: 8.4E-21 score: 74.6
IPR006634	TRAM/LAG1/CLN8 homology domain	PROSITE	PS50922	TLC	coord: 57..240 score: 30.794392
None	No IPR available	PANTHER	PTHR13439	CT120 PROTEIN	coord: 202..243
None	No IPR available	PANTHER	PTHR13439:SF60	TRAM, LAG1 AND CLN8 (TLC) LIPID-SENSING DOMAIN PROTEIN	coord: 2..204 coord: 202..243
None	No IPR available	PANTHER	PTHR13439	CT120 PROTEIN	coord: 2..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013821.1	HG10013821.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane