HG10013752 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013752
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Chalcone-flavonone isomerase family protein
Location	Chr02: 4441712 .. 4444157 (-)
RNA-Seq Expression	HG10013752
Synteny	HG10013752

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCAAATGGTGCTGTAAATTCCACCCCATTAAGGCTCCCATCAGCCATTCCCACTGGGAAATGGAATTCAAATCCCAGAATTTGCCTTCTAACAAAACCCCCAATTCCTACTCTCTCCTTGTACCAATTTCAGTCTACTTTCACTCTCAACAGGAACTTCAGATTTTGTTCGAATCTCTCTCTCAAAGCTTCTTCTTCCCTTGCTTCAGGTAATGAAATGTTAAATGATTCTTCCATATCTGCTTCTTTTGAACCTTGTGTTTCATTCTTTTGATGTTAATGGTGAGAAAATCTGGAATGATTCTTGAGTTTCTGCATAAGATCGAGATCGAGCTTTAGGGTCTGTTTGGATTTACGTTCTAAGTGCTTAAAAATGTGGTTTTAAGTGAAAACAAAATTATTTTTATGAGTTTAGAAAGTGAATCTAAATAGACACTCTGTTTTTCAAGTTTGGAGTTTAGGTTTTGATTAATCGAAGTTGAGGGCAATGGTTTATAAAGTTGAAGGTAATATTGAGTAAAGGCTGTGGCGGTTTTGGAGTGATCTTGAACATGAAAAGATGATTTAAACCTTTTGAAAATGACTTGCCAACATGCCCTAAATTTATTTGGCATCGGTTGATTAATGGTATTTCTACAATGTTAGGGTAGGATGTTGTGTAGATTGAGATATTGTATCACTTTTAAACCTATCTTCTTCTCGAACAATGGACCACCAAGTCTCCTCTCGAGGACATTGTCTTAACTACATCAACGACTGTTTTTTTTTCCAATCCTGTAATCTTGTTGTCTATTAGAGTAGGCGTAGGAAGAATAATATTTCATTTTTGTTGTTTTTCTCAGAAAGTAATACTGAAACCCTTTGTTCTTTAATCAATGGGTTACAACAGTTGGAAATGCAGGATATGTGGAGGAACCTTCAACCAATGTAAAATTTCCGACGTCCTTGACTCTGCCGGGCTGCTCAACCTCGCTGTCACTGCTCGGAACAGGTCATTTCATTATGTTTCTACACTGAATTCTACTAAGGAAGACCGATTTTATGAAAATTTAAACTGTTAAAATAATCTGTAGCTCATATATTTTCCTGCAATGTGTTTAAAAGAACCATTAGAATCAAAAGCTCTTGTCATTGTATGCTGCAATTGGTATTTGGTACATAAGTTGCATTGCTGCAGGCAAGAAAATTTGCTTCCAGCTGGAGTCCCTTCCTTTACATAAGTTGCATATGAATATCGTATTCTATAGGCATTATTTTGCATGGTTGGAGTCCCTTCCTGTAGAGGGATGTCCCTTTTTTGTGGACTTGGTATTTTGTATGCCTGTGTATTCTTTCATTTTTTTTCCTCAATGAAAGTTGTTTCTATCTAATAAAAACTTGCAGCTATCGAGAATGAAACGATTTTCGACATCTTCTTTGGATCAAAAGAAAAGAAAAATGAACACCATTCAAGGCGCAGTTTGTTTTAAGAAGTTGACTATTTATTCTACTTTGAGACATATAAACTAAAGAAATTTAGTCTGAGATATTTATTATCCTAATGCTACCTATGAATTTTATACATCCGAAATGTTGATCCTTTTAACGGAACTATATTCTTCCACATGATCTTCATTAGCTGCAAATATTTCAGGTTACAGAGAGAAAGTTTTTGCTATCATTGGTGTTAAGGTCTATGCTGCAGGACTATACATCAATTCATCCATCTCAAATGAATTAAACGCTTGGAGTGGACGATCGGCTGCTGCAATTCAGGAGGATTCTTCCTTGTTCAATATAATTTTTCAGTGTAATAACCGTACATATAATTTATAAATAATTGTATGATTTTAGAAGTTGTGGAAAGTGAGAATGATACTCTCCTTTTCCATTTTTTCCCACGGCTTTGAAGCTTATGTAACTAACTACAAGTTTCTTGTCTTTTAATGGCAGCTCCTTCAGAAAAATCTTTACAGATTGTTCTTGTCCGAGACGTCGATGGTAAAACTTTCTGGGACGCCTTGGATGATGCCATTTCTCCAAGAATCAAAGCACCAACAACGGTTGATGAATCTGCATTATCTACCTTTCGTAACATCTTCGAGGGACGATCTCTTAAGAAAGGAACTTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTTGTATGTTTGAATTTTAACTGACTTACATTCTCTTTTCTTTTCCTTCCAGTAATGTTATTGCATGGACATTCTTAATTTCATCTTCGAGCAAGTTTCATTCTGCTTATTCTGATGCAGAGAATCGATGAATTGCAGGTTAGCATCTCAACAGATGGCCCACCAACAGGAATAGAAGCTACAATTGAATCAAATAATGTGACTTCAGCTCTTTTCGATGTTTTTTTCGGGGACTCCCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAACTGGATTGGCTGCAGTTTTGAAATAG

mRNA sequence

ATGGCTGCAAATGGTGCTGTAAATTCCACCCCATTAAGGCTCCCATCAGCCATTCCCACTGGGAAATGGAATTCAAATCCCAGAATTTGCCTTCTAACAAAACCCCCAATTCCTACTCTCTCCTTGTACCAATTTCAGTCTACTTTCACTCTCAACAGGAACTTCAGATTTTGTTCGAATCTCTCTCTCAAAGCTTCTTCTTCCCTTGCTTCAGTTGGAAATGCAGGATATGTGGAGGAACCTTCAACCAATGTAAAATTTCCGACGTCCTTGACTCTGCCGGGCTGCTCAACCTCGCTGTCACTGCTCGGAACAGCTCCTTCAGAAAAATCTTTACAGATTGTTCTTGTCCGAGACGTCGATGGTAAAACTTTCTGGGACGCCTTGGATGATGCCATTTCTCCAAGAATCAAAGCACCAACAACGGTTGATGAATCTGCATTATCTACCTTTCGTAACATCTTCGAGGGACGATCTCTTAAGAAAGGAACTTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTTGTTAGCATCTCAACAGATGGCCCACCAACAGGAATAGAAGCTACAATTGAATCAAATAATGTGACTTCAGCTCTTTTCGATGTTTTTTTCGGGGACTCCCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAACTGGATTGGCTGCAGTTTTGAAATAG

Coding sequence (CDS)

ATGGCTGCAAATGGTGCTGTAAATTCCACCCCATTAAGGCTCCCATCAGCCATTCCCACTGGGAAATGGAATTCAAATCCCAGAATTTGCCTTCTAACAAAACCCCCAATTCCTACTCTCTCCTTGTACCAATTTCAGTCTACTTTCACTCTCAACAGGAACTTCAGATTTTGTTCGAATCTCTCTCTCAAAGCTTCTTCTTCCCTTGCTTCAGTTGGAAATGCAGGATATGTGGAGGAACCTTCAACCAATGTAAAATTTCCGACGTCCTTGACTCTGCCGGGCTGCTCAACCTCGCTGTCACTGCTCGGAACAGCTCCTTCAGAAAAATCTTTACAGATTGTTCTTGTCCGAGACGTCGATGGTAAAACTTTCTGGGACGCCTTGGATGATGCCATTTCTCCAAGAATCAAAGCACCAACAACGGTTGATGAATCTGCATTATCTACCTTTCGTAACATCTTCGAGGGACGATCTCTTAAGAAAGGAACTTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTTGTTAGCATCTCAACAGATGGCCCACCAACAGGAATAGAAGCTACAATTGAATCAAATAATGTGACTTCAGCTCTTTTCGATGTTTTTTTCGGGGACTCCCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAACTGGATTGGCTGCAGTTTTGAAATAG

Protein sequence

MAANGAVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTLNRNFRFCSNLSLKASSSLASVGNAGYVEEPSTNVKFPTSLTLPGCSTSLSLLGTAPSEKSLQIVLVRDVDGKTFWDALDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLVSISTDGPPTGIEATIESNNVTSALFDVFFGDSPVSPTLKASVATGLAAVLK

Homology

[Close]

BLAST of HG10013752 vs. NCBI nr
Match: XP_038898313.1 (fatty-acid-binding protein 3, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 376.3 bits (965), Expect = 1.8e-100
Identity = 209/281 (74.38%), Postives = 217/281 (77.22%), Query Frame = 0


Query: 1   MAANGAVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTLNRNFRFCSN 60
           MAA+ AVNSTPLRLPSAIPTGKWN NPR+CLLTKP  PT+SLY+ QSTF+LN NFRFCSN
Sbjct: 1   MAAD-AVNSTPLRLPSAIPTGKWNYNPRVCLLTKPSTPTVSLYKIQSTFSLN-NFRFCSN 60

Query: 61  LSLKASSSLASVGNAGYVEEPSTNVKFPTSLTLPGCSTSLSLLGT--------------- 120
           LSLKASSSLASVGNAGYVEEPSTNVKFPTSLTLPG STSLSLLGT               
Sbjct: 61  LSLKASSSLASVGNAGYVEEPSTNVKFPTSLTLPGFSTSLSLLGTGYREKIFAIIGVKVY 120

Query: 121 -------------------------------------APSEKSLQIVLVRDVDGKTFWDA 180
                                                +PSEKSLQIVLVRDVDGKTFWDA
Sbjct: 121 AAGLYINPSISNELNAWRGRPAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWDA 180

Query: 181 LDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLVSISTDGPPTG 230
           LDDAISPRIKAPT VDESALSTFR+IF+GRSLKKGTFIFLTWLEP KMLVSIS DGPPTG
Sbjct: 181 LDDAISPRIKAPTPVDESALSTFRSIFQGRSLKKGTFIFLTWLEPTKMLVSISVDGPPTG 240

[Close]

BLAST of HG10013752 vs. NCBI nr
Match: XP_038898314.1 (fatty-acid-binding protein 3, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 362.8 bits (930), Expect = 2.1e-96
Identity = 205/281 (72.95%), Postives = 213/281 (75.80%), Query Frame = 0


Query: 1   MAANGAVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTLNRNFRFCSN 60
           MAA+ AVNSTPLRLPSAIPTGKWN NPR+CLLTKP  PT+SLY+ QSTF+LN NFRFCSN
Sbjct: 1   MAAD-AVNSTPLRLPSAIPTGKWNYNPRVCLLTKPSTPTVSLYKIQSTFSLN-NFRFCSN 60

Query: 61  LSLKASSSLASVGNAGYVEEPSTNVKFPTSLTLPGCSTSLSLLGT--------------- 120
           LSLKASSSLAS    GYVEEPSTNVKFPTSLTLPG STSLSLLGT               
Sbjct: 61  LSLKASSSLAS----GYVEEPSTNVKFPTSLTLPGFSTSLSLLGTGYREKIFAIIGVKVY 120

Query: 121 -------------------------------------APSEKSLQIVLVRDVDGKTFWDA 180
                                                +PSEKSLQIVLVRDVDGKTFWDA
Sbjct: 121 AAGLYINPSISNELNAWRGRPAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWDA 180

Query: 181 LDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLVSISTDGPPTG 230
           LDDAISPRIKAPT VDESALSTFR+IF+GRSLKKGTFIFLTWLEP KMLVSIS DGPPTG
Sbjct: 181 LDDAISPRIKAPTPVDESALSTFRSIFQGRSLKKGTFIFLTWLEPTKMLVSISVDGPPTG 240

[Close]

BLAST of HG10013752 vs. NCBI nr
Match: XP_022140846.1 (fatty-acid-binding protein 3, chloroplastic [Momordica charantia])

HSP 1 Score: 352.4 bits (903), Expect = 2.9e-93
Identity = 194/279 (69.53%), Postives = 206/279 (73.84%), Query Frame = 0


Query: 3   ANGAVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTLNRNFRFCSNLS 62
           A  A NSTPL+ PS IPT KWNSNPRIC+LTKPP P+LSLYQ QS  +L+ N RFCS+ S
Sbjct: 2   AGNAANSTPLKFPSTIPTVKWNSNPRICVLTKPPTPSLSLYQVQS-LSLHNNCRFCSSFS 61

Query: 63  LKASSSLASVGNAGYVEEPSTNVKFPTSLTLPGCSTSLSLLGT----------------- 122
           LKASSS+ASVGN  YV EPSTNVKF TSL+LPGCSTSLSLLGT                 
Sbjct: 62  LKASSSIASVGNTEYVVEPSTNVKFSTSLSLPGCSTSLSLLGTGYREKVFAIIGVKVYAA 121

Query: 123 -----------------------------------APSEKSLQIVLVRDVDGKTFWDALD 182
                                              +PSEKSLQIVLVRDVDGKTFWDALD
Sbjct: 122 GLYINTSVSNELNSWRGRSATVIQEDSSLFNIIFKSPSEKSLQIVLVRDVDGKTFWDALD 181

Query: 183 DAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLVSISTDGPPTGIE 230
           DAISPRIKAPT VDE ALSTFR+IF+GRSLKKGTFIFLTWLEPPKMLVSIS DG PTG+E
Sbjct: 182 DAISPRIKAPTPVDELALSTFRSIFQGRSLKKGTFIFLTWLEPPKMLVSISVDGLPTGVE 241

[Close]

BLAST of HG10013752 vs. NCBI nr
Match: XP_004146009.1 (fatty-acid-binding protein 3, chloroplastic isoform X1 [Cucumis sativus] >KGN55017.1 hypothetical protein Csa_012003 [Cucumis sativus])

HSP 1 Score: 348.6 bits (893), Expect = 4.1e-92
Identity = 200/282 (70.92%), Postives = 211/282 (74.82%), Query Frame = 0


Query: 1   MAANGAVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTL-NRNFRFCS 60
           MAAN AVNSTPL LP +IPTGK NS+P ICLLTKP IPTLS++   STF+L N NFRF S
Sbjct: 1   MAAN-AVNSTPLSLPLSIPTGKLNSSPTICLLTKPSIPTLSIH---STFSLSNNNFRFYS 60

Query: 61  NLSLKASSSLASVGNAGYVEEPSTNVKFPTSLTLPGCSTSLSLLGT-------------- 120
           N SL+ SSSLASVGNAG+VEEPSTNVKFPTSLTLPGCSTSLSLLGT              
Sbjct: 61  NFSLRPSSSLASVGNAGFVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKV 120

Query: 121 --------------------------------------APSEKSLQIVLVRDVDGKTFWD 180
                                                 + SEKSLQIVLVRDVDGKTFWD
Sbjct: 121 YAAGLYINSSVSNELNAWRGRSAAAIQEDSSLFDIIFQSRSEKSLQIVLVRDVDGKTFWD 180

Query: 181 ALDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLVSISTDGPPT 230
           ALDDAISPRIKAPT  DESALSTFR+IFEGRSLKKGTFIFLTWLEPPKMLVSIS DG PT
Sbjct: 181 ALDDAISPRIKAPTPDDESALSTFRSIFEGRSLKKGTFIFLTWLEPPKMLVSISIDGSPT 240

[Close]

BLAST of HG10013752 vs. NCBI nr
Match: XP_008452432.2 (PREDICTED: fatty-acid-binding protein 3, chloroplastic isoform X1 [Cucumis melo] >KAA0064310.1 fatty-acid-binding protein 3 [Cucumis melo var. makuwa] >TYK20276.1 fatty-acid-binding protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 347.1 bits (889), Expect = 1.2e-91
Identity = 199/282 (70.57%), Postives = 209/282 (74.11%), Query Frame = 0


Query: 1   MAANGAVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTLNRN-FRFCS 60
           MAAN  VN TPL LP ++PTGK NSNP ICLLTKP IPTLS++   STF+LN N FRF S
Sbjct: 1   MAAN-VVNPTPLSLPLSVPTGKLNSNPTICLLTKPSIPTLSIH---STFSLNNNFFRFSS 60

Query: 61  NLSLKASSSLASVGNAGYVEEPSTNVKFPTSLTLPGCSTSLSLLGT-------------- 120
           N SLK SSSLASVGNAG+VEEPSTNVKFPTSLTLPGCSTSLSLLGT              
Sbjct: 61  NFSLKPSSSLASVGNAGFVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKV 120

Query: 121 --------------------------------------APSEKSLQIVLVRDVDGKTFWD 180
                                                 + SEKSLQIVLVRDVDGKTFWD
Sbjct: 121 YAAGLYINSSVSNELNAWRGRSAAAIQEDSSLFDIIFQSCSEKSLQIVLVRDVDGKTFWD 180

Query: 181 ALDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLVSISTDGPPT 230
           ALDDAISPRIKAPT  DESALSTFR+IFEGRSLKKGTFIFLTWLEPPKMLVSIS +GPPT
Sbjct: 181 ALDDAISPRIKAPTPGDESALSTFRSIFEGRSLKKGTFIFLTWLEPPKMLVSISINGPPT 240

[Close]

BLAST of HG10013752 vs. ExPASy Swiss-Prot
Match: Q9C8L2 (Fatty-acid-binding protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAP3 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.0e-49
Identity = 117/227 (51.54%), Postives = 139/227 (61.23%), Query Frame = 0


Query: 56  RFCSNLS-LKASSSLASVGNA-GYVEEPSTNVKFPTSLTLPGCSTSLSLLGT-------- 115
           R C  +S +   S+ +SVGNA  Y EE +T+VKF  S+TLPGCS+ LSLLGT        
Sbjct: 60  RHCGEISRVIVKSAASSVGNAEDYAEETATSVKFKRSVTLPGCSSPLSLLGTGFREKKFA 119

Query: 116 --------------------------------------------APSEKSLQIVLVRDVD 175
                                                       A +EKSLQIVLVRDVD
Sbjct: 120 IIGVKVYAAGYYVNESILSGLSAWTGRSADEIQRDSSLFVSIFQAQAEKSLQIVLVRDVD 179

Query: 176 GKTFWDALDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLVSIS 229
           GKTFWDALD+AISPRIK+P++ D +ALSTFR IF+ R L KG+ I LTW+    MLVS+S
Sbjct: 180 GKTFWDALDEAISPRIKSPSSEDTTALSTFRGIFQNRPLNKGSVILLTWINTSNMLVSVS 239

[Close]

BLAST of HG10013752 vs. ExPASy Swiss-Prot
Match: Q53B70 (Chalcone--flavanone isomerase 1B-2 OS=Glycine max OX=3847 GN=CHI1B2 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 6.8e-05
Identity = 32/120 (26.67%), Postives = 60/120 (50.00%), Query Frame = 0


Query: 107 PSEKSLQIVLVRDVDGKTFWDALDDAISPRIKAPTT---VDESALSTFRNIFEGRSLKKG 166
           P EK ++   +R +DG+ +   + +     +++  T    +E A+  FRN F+ ++   G
Sbjct: 90  PFEKLIRGSKLRTLDGREYVRKVSENCVAHMESVGTYSEAEEKAIEEFRNAFKDQNFPPG 149

Query: 167 TFIFLTWLEPPKMLVSISTDGP-PTGIEATIESNNVTSALFDVFFGDSPVSPTLKASVAT 223
           + +F        + +S S D   P    A I++  ++ A+ +   G+ PVSP LK S+AT
Sbjct: 150 STVFYKQSPTGTLGLSFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLAT 209

[Close]

BLAST of HG10013752 vs. ExPASy Swiss-Prot
Match: Q53B75 (Chalcone--flavanone isomerase 1B-1 OS=Glycine max OX=3847 GN=CHI1B1 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 8.8e-05
Identity = 32/120 (26.67%), Postives = 60/120 (50.00%), Query Frame = 0


Query: 107 PSEKSLQIVLVRDVDGKTFWDALDDAISPRIKAPTTV---DESALSTFRNIFEGRSLKKG 166
           P EK ++   +R +DG+ +   + +     +++  T    +E A+  FRN F+ ++   G
Sbjct: 90  PFEKLIRGSKLRTLDGREYVRKVSENCVAHMQSVGTYSDEEEKAIEEFRNAFKDQNFPPG 149

Query: 167 TFIFLTWLEPPKMLVSISTDGP-PTGIEATIESNNVTSALFDVFFGDSPVSPTLKASVAT 223
           + +F        + +S S D   P    A I++  ++ A+ +   G+ PVSP LK S+AT
Sbjct: 150 STVFYKQSPTGTLGLSFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLAT 209

[Close]

BLAST of HG10013752 vs. ExPASy Swiss-Prot
Match: A7ISP5 (Chalcone--flavanone isomerase 2-B OS=Glycine max OX=3847 GN=CHI2-B PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.5e-04
Identity = 31/123 (25.20%), Postives = 61/123 (49.59%), Query Frame = 0


Query: 107 PSEKSLQIVLVRDVDGKTFWDALDDAISPRIKAPTTV---DESALSTFRNIFEGRSLKKG 166
           P EK ++   +R +DG+ +   + +     +++  T    +E A+  FRN F+ ++   G
Sbjct: 90  PFEKLIRGSKLRTLDGREYVRKVSENCVAHMQSVGTYSDEEEKAIEEFRNAFKDQNFPPG 149

Query: 167 TFIFLTWLEPPK----MLVSISTDGPPTGIEATIESNNVTSALFDVFFGDSPVSPTLKAS 223
           + +F  + + P      L+    +  P    A I++  ++ A+ +   G+ PVSP LK S
Sbjct: 150 STVF--YKQSPTGTLGQLIFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKES 209

[Close]

BLAST of HG10013752 vs. ExPASy TrEMBL
Match: A0A6J1CH93 (Chalcone-flavonone isomerase family protein OS=Momordica charantia OX=3673 GN=LOC111011413 PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.4e-93
Identity = 194/279 (69.53%), Postives = 206/279 (73.84%), Query Frame = 0


Query: 3   ANGAVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTLNRNFRFCSNLS 62
           A  A NSTPL+ PS IPT KWNSNPRIC+LTKPP P+LSLYQ QS  +L+ N RFCS+ S
Sbjct: 2   AGNAANSTPLKFPSTIPTVKWNSNPRICVLTKPPTPSLSLYQVQS-LSLHNNCRFCSSFS 61

Query: 63  LKASSSLASVGNAGYVEEPSTNVKFPTSLTLPGCSTSLSLLGT----------------- 122
           LKASSS+ASVGN  YV EPSTNVKF TSL+LPGCSTSLSLLGT                 
Sbjct: 62  LKASSSIASVGNTEYVVEPSTNVKFSTSLSLPGCSTSLSLLGTGYREKVFAIIGVKVYAA 121

Query: 123 -----------------------------------APSEKSLQIVLVRDVDGKTFWDALD 182
                                              +PSEKSLQIVLVRDVDGKTFWDALD
Sbjct: 122 GLYINTSVSNELNSWRGRSATVIQEDSSLFNIIFKSPSEKSLQIVLVRDVDGKTFWDALD 181

Query: 183 DAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLVSISTDGPPTGIE 230
           DAISPRIKAPT VDE ALSTFR+IF+GRSLKKGTFIFLTWLEPPKMLVSIS DG PTG+E
Sbjct: 182 DAISPRIKAPTPVDELALSTFRSIFQGRSLKKGTFIFLTWLEPPKMLVSISVDGLPTGVE 241

[Close]

BLAST of HG10013752 vs. ExPASy TrEMBL
Match: A0A0A0L368 (Chalcone-flavonone isomerase family protein OS=Cucumis sativus OX=3659 GN=Csa_4G622760 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 2.0e-92
Identity = 200/282 (70.92%), Postives = 211/282 (74.82%), Query Frame = 0


Query: 1   MAANGAVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTL-NRNFRFCS 60
           MAAN AVNSTPL LP +IPTGK NS+P ICLLTKP IPTLS++   STF+L N NFRF S
Sbjct: 1   MAAN-AVNSTPLSLPLSIPTGKLNSSPTICLLTKPSIPTLSIH---STFSLSNNNFRFYS 60

Query: 61  NLSLKASSSLASVGNAGYVEEPSTNVKFPTSLTLPGCSTSLSLLGT-------------- 120
           N SL+ SSSLASVGNAG+VEEPSTNVKFPTSLTLPGCSTSLSLLGT              
Sbjct: 61  NFSLRPSSSLASVGNAGFVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKV 120

Query: 121 --------------------------------------APSEKSLQIVLVRDVDGKTFWD 180
                                                 + SEKSLQIVLVRDVDGKTFWD
Sbjct: 121 YAAGLYINSSVSNELNAWRGRSAAAIQEDSSLFDIIFQSRSEKSLQIVLVRDVDGKTFWD 180

Query: 181 ALDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLVSISTDGPPT 230
           ALDDAISPRIKAPT  DESALSTFR+IFEGRSLKKGTFIFLTWLEPPKMLVSIS DG PT
Sbjct: 181 ALDDAISPRIKAPTPDDESALSTFRSIFEGRSLKKGTFIFLTWLEPPKMLVSISIDGSPT 240

[Close]

BLAST of HG10013752 vs. ExPASy TrEMBL
Match: A0A5A7VAQ8 (Chalcone-flavonone isomerase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G004160 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.8e-92
Identity = 199/282 (70.57%), Postives = 209/282 (74.11%), Query Frame = 0


Query: 1   MAANGAVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTLNRN-FRFCS 60
           MAAN  VN TPL LP ++PTGK NSNP ICLLTKP IPTLS++   STF+LN N FRF S
Sbjct: 1   MAAN-VVNPTPLSLPLSVPTGKLNSNPTICLLTKPSIPTLSIH---STFSLNNNFFRFSS 60

Query: 61  NLSLKASSSLASVGNAGYVEEPSTNVKFPTSLTLPGCSTSLSLLGT-------------- 120
           N SLK SSSLASVGNAG+VEEPSTNVKFPTSLTLPGCSTSLSLLGT              
Sbjct: 61  NFSLKPSSSLASVGNAGFVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKV 120

Query: 121 --------------------------------------APSEKSLQIVLVRDVDGKTFWD 180
                                                 + SEKSLQIVLVRDVDGKTFWD
Sbjct: 121 YAAGLYINSSVSNELNAWRGRSAAAIQEDSSLFDIIFQSCSEKSLQIVLVRDVDGKTFWD 180

Query: 181 ALDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLVSISTDGPPT 230
           ALDDAISPRIKAPT  DESALSTFR+IFEGRSLKKGTFIFLTWLEPPKMLVSIS +GPPT
Sbjct: 181 ALDDAISPRIKAPTPGDESALSTFRSIFEGRSLKKGTFIFLTWLEPPKMLVSISINGPPT 240

[Close]

BLAST of HG10013752 vs. ExPASy TrEMBL
Match: A0A1S3BTS4 (Chalcone-flavonone isomerase family protein OS=Cucumis melo OX=3656 GN=LOC103493466 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.8e-92
Identity = 199/282 (70.57%), Postives = 209/282 (74.11%), Query Frame = 0


Query: 1   MAANGAVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTLNRN-FRFCS 60
           MAAN  VN TPL LP ++PTGK NSNP ICLLTKP IPTLS++   STF+LN N FRF S
Sbjct: 1   MAAN-VVNPTPLSLPLSVPTGKLNSNPTICLLTKPSIPTLSIH---STFSLNNNFFRFSS 60

Query: 61  NLSLKASSSLASVGNAGYVEEPSTNVKFPTSLTLPGCSTSLSLLGT-------------- 120
           N SLK SSSLASVGNAG+VEEPSTNVKFPTSLTLPGCSTSLSLLGT              
Sbjct: 61  NFSLKPSSSLASVGNAGFVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKV 120

Query: 121 --------------------------------------APSEKSLQIVLVRDVDGKTFWD 180
                                                 + SEKSLQIVLVRDVDGKTFWD
Sbjct: 121 YAAGLYINSSVSNELNAWRGRSAAAIQEDSSLFDIIFQSCSEKSLQIVLVRDVDGKTFWD 180

Query: 181 ALDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLVSISTDGPPT 230
           ALDDAISPRIKAPT  DESALSTFR+IFEGRSLKKGTFIFLTWLEPPKMLVSIS +GPPT
Sbjct: 181 ALDDAISPRIKAPTPGDESALSTFRSIFEGRSLKKGTFIFLTWLEPPKMLVSISINGPPT 240

[Close]

BLAST of HG10013752 vs. ExPASy TrEMBL
Match: A0A6J1FD29 (Chalcone-flavonone isomerase family protein OS=Cucurbita moschata OX=3662 GN=LOC111442911 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.3e-72
Identity = 157/236 (66.53%), Postives = 174/236 (73.73%), Query Frame = 0


Query: 6   AVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTLNRNFRFCS---NLS 65
           AVN+TPLRLP AIPTGKW+SN R+CL  KPP         QST + N++FR CS   N+S
Sbjct: 36  AVNATPLRLPPAIPTGKWSSNARVCLPRKPPT--------QSTSSFNKSFRSCSNSANIS 95

Query: 66  LKASSSLASVGNAGYVEEPSTNVKFPTSL---------TLPGCSTSLSLLGTAPSEKSLQ 125
                  A +G   Y      N      L          +   S+  +++  +PSEKSLQ
Sbjct: 96  GFREKVFAIIGVKVYAAGLYINSSISNELNAWRGRSAAAIQEDSSLFNIIFQSPSEKSLQ 155

Query: 126 IVLVRDVDGKTFWDALDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEP 185
           IVLVRDVDGKTFWDALDDAISPRIKAPT VDESALSTFR+IFEGRSLKKGTFIFLTWLEP
Sbjct: 156 IVLVRDVDGKTFWDALDDAISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLEP 215

Query: 186 PKMLVSISTDGPPTGIEATIESNNVTSALFDVFFGDSPVSPTLKASVATGLAAVLK 230
           PKMLVSIS DGPPTGIEATIESNNVTSALFDVFFGD+PVSPTLKASVA GL+AVLK
Sbjct: 216 PKMLVSISVDGPPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVLK 263

[Close]

BLAST of HG10013752 vs. TAIR 10
Match: AT1G53520.1 (Chalcone-flavanone isomerase family protein )

HSP 1 Score: 197.2 bits (500), Expect = 1.4e-50
Identity = 117/227 (51.54%), Postives = 139/227 (61.23%), Query Frame = 0


Query: 56  RFCSNLS-LKASSSLASVGNA-GYVEEPSTNVKFPTSLTLPGCSTSLSLLGT-------- 115
           R C  +S +   S+ +SVGNA  Y EE +T+VKF  S+TLPGCS+ LSLLGT        
Sbjct: 60  RHCGEISRVIVKSAASSVGNAEDYAEETATSVKFKRSVTLPGCSSPLSLLGTGFREKKFA 119

Query: 116 --------------------------------------------APSEKSLQIVLVRDVD 175
                                                       A +EKSLQIVLVRDVD
Sbjct: 120 IIGVKVYAAGYYVNESILSGLSAWTGRSADEIQRDSSLFVSIFQAQAEKSLQIVLVRDVD 179

Query: 176 GKTFWDALDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLVSIS 229
           GKTFWDALD+AISPRIK+P++ D +ALSTFR IF+ R L KG+ I LTW+    MLVS+S
Sbjct: 180 GKTFWDALDEAISPRIKSPSSEDTTALSTFRGIFQNRPLNKGSVILLTWINTSNMLVSVS 239

The following BLAST results are available for this feature:

BLAST of HG10013752 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898313.1	1.8e-100	74.38	fatty-acid-binding protein 3, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_038898314.1	2.1e-96	72.95	fatty-acid-binding protein 3, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_022140846.1	2.9e-93	69.53	fatty-acid-binding protein 3, chloroplastic [Momordica charantia]	[more]
XP_004146009.1	4.1e-92	70.92	fatty-acid-binding protein 3, chloroplastic isoform X1 [Cucumis sativus] >KGN550...	[more]
XP_008452432.2	1.2e-91	70.57	PREDICTED: fatty-acid-binding protein 3, chloroplastic isoform X1 [Cucumis melo]...	[more]

BLAST of HG10013752 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8L2	2.0e-49	51.54	Fatty-acid-binding protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=F...	[more]
Q53B70	6.8e-05	26.67	Chalcone--flavanone isomerase 1B-2 OS=Glycine max OX=3847 GN=CHI1B2 PE=2 SV=1	[more]
Q53B75	8.8e-05	26.67	Chalcone--flavanone isomerase 1B-1 OS=Glycine max OX=3847 GN=CHI1B1 PE=2 SV=1	[more]
A7ISP5	7.5e-04	25.20	Chalcone--flavanone isomerase 2-B OS=Glycine max OX=3847 GN=CHI2-B PE=2 SV=1	[more]

BLAST of HG10013752 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CH93	1.4e-93	69.53	Chalcone-flavonone isomerase family protein OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A0A0L368	2.0e-92	70.92	Chalcone-flavonone isomerase family protein OS=Cucumis sativus OX=3659 GN=Csa_4G...	[more]
A0A5A7VAQ8	5.8e-92	70.57	Chalcone-flavonone isomerase family protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BTS4	5.8e-92	70.57	Chalcone-flavonone isomerase family protein OS=Cucumis melo OX=3656 GN=LOC103493...	[more]
A0A6J1FD29	2.3e-72	66.53	Chalcone-flavonone isomerase family protein OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of HG10013752 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53520.1	1.4e-50	51.54	Chalcone-flavanone isomerase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016087	Chalcone isomerase	PFAM	PF02431	Chalcone	coord: 105..225 e-value: 1.8E-10 score: 40.6
IPR016088	Chalcone isomerase, 3-layer sandwich	GENE3D	3.50.70.10		coord: 107..206 e-value: 3.5E-29 score: 103.6 coord: 66..106 e-value: 8.4E-6 score: 27.5
None	No IPR available	PANTHER	PTHR47698	FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC	coord: 44..106
None	No IPR available	PANTHER	PTHR47698:SF2	FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC	coord: 106..228 coord: 44..106
None	No IPR available	PANTHER	PTHR47698	FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC	coord: 106..228
IPR036298	Chalcone isomerase superfamily	SUPERFAMILY	54626	Chalcone isomerase	coord: 77..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013752.1	HG10013752.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006631	fatty acid metabolic process
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0005504	fatty acid binding
molecular_function	GO:0016872	intramolecular lyase activity