HG10013747 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10013747
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionFe2OG dioxygenase domain-containing protein
LocationChr02: 4423383 .. 4423544 (+)
RNA-Seq ExpressionHG10013747
SyntenyHG10013747
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAGAAATAAGGCCAACACCATCCCTCATCACACCTCATTCTCCTCCTTTGTTTACAACTTTGACATACCAAGAGTTTGTGAGGGGCCTCTTTACTCGAAAACTAGACGGAAAATCTTACCTCGATTCTATGCGAATTCATCGTCCTCCTACCTAA

mRNA sequence

ATGGAGAAAGAAATAAGGCCAACACCATCCCTCATCACACCTCATTCTCCTCCTTTGTTTACAACTTTGACATACCAAGAGTTTGTGAGGGGCCTCTTTACTCGAAAACTAGACGGAAAATCTTACCTCGATTCTATGCGAATTCATCGTCCTCCTACCTAA

Coding sequence (CDS)

ATGGAGAAAGAAATAAGGCCAACACCATCCCTCATCACACCTCATTCTCCTCCTTTGTTTACAACTTTGACATACCAAGAGTTTGTGAGGGGCCTCTTTACTCGAAAACTAGACGGAAAATCTTACCTCGATTCTATGCGAATTCATCGTCCTCCTACCTAA

Protein sequence

MEKEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRIHRPPT
Homology
[Close]
BLAST of HG10013747 vs. NCBI nr
Match: XP_008463796.1 (PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Cucumis melo])

HSP 1 Score: 99.4 bits (246), Expect = 1.0e-17
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = 0 

Query: 1   MEKEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRIHRPPT 54
           +EKEIRPTPSLITPHSPPLFTTLTYQE+VRG+F+RKLDGKSYLD+MRIH   T
Sbjct: 309 LEKEIRPTPSLITPHSPPLFTTLTYQEYVRGIFSRKLDGKSYLDAMRIHHLST 361

[Close]
BLAST of HG10013747 vs. NCBI nr
Match: XP_038897143.1 (protein SRG1-like [Benincasa hispida])

HSP 1 Score: 99.0 bits (245), Expect = 1.3e-17
Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0 

Query: 1   MEKEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRIHRPPT 54
           MEKEIRP PSLITPHSPPLF TLTYQEFV+GLFT+KLDGKSYLD+MRIH  PT
Sbjct: 310 MEKEIRPIPSLITPHSPPLFKTLTYQEFVKGLFTQKLDGKSYLDAMRIHYLPT 362

[Close]
BLAST of HG10013747 vs. NCBI nr
Match: XP_004146011.3 (LOW QUALITY PROTEIN: protein SRG1 [Cucumis sativus])

HSP 1 Score: 96.3 bits (238), Expect = 8.5e-17
Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 0 

Query: 1   MEKEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRIHRPPT 54
           +EKEIRPTPSLITPHSPPLF TLTYQE+V+GLF+R LDGK+YLD+MRIH P T
Sbjct: 310 LEKEIRPTPSLITPHSPPLFRTLTYQEYVKGLFSRTLDGKTYLDAMRIHPPST 362

[Close]
BLAST of HG10013747 vs. NCBI nr
Match: KGN55530.2 (hypothetical protein Csa_012011 [Cucumis sativus])

HSP 1 Score: 96.3 bits (238), Expect = 8.5e-17
Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 0 

Query: 1   MEKEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRIHRPPT 54
           +EKEIRPTPSLITPHSPPLF TLTYQE+V+GLF+R LDGK+YLD+MRIH P T
Sbjct: 310 LEKEIRPTPSLITPHSPPLFRTLTYQEYVKGLFSRTLDGKTYLDAMRIHPPST 362

[Close]
BLAST of HG10013747 vs. NCBI nr
Match: XP_022131763.1 (protein SRG1-like [Momordica charantia])

HSP 1 Score: 94.4 bits (233), Expect = 3.2e-16
Identity = 43/52 (82.69%), Postives = 47/52 (90.38%), Query Frame = 0 

Query: 2   EKEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRIHRPPT 54
           EK IRP PSLITPHSPPLFT+LTYQ +V GLFTRKLDGKSYLD+MRI+ PPT
Sbjct: 345 EKLIRPAPSLITPHSPPLFTSLTYQHYVSGLFTRKLDGKSYLDAMRINHPPT 396

[Close]
BLAST of HG10013747 vs. ExPASy Swiss-Prot
Match: D4N501 (Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum OX=3469 GN=DIOX2 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.9e-07
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0 

Query: 1   MEKEIRPTPSLITPHSPPLFTT-LTYQEFVRGLFTRKLDGKSYLDSMRI 49
           +E EI P  SLITP++P LF +  TY E V    +RKLDGKS+LDSMR+
Sbjct: 316 LESEIGPISSLITPNTPALFRSGSTYGELVEEFHSRKLDGKSFLDSMRM 364

[Close]
BLAST of HG10013747 vs. ExPASy Swiss-Prot
Match: D4N500 (Thebaine 6-O-demethylase OS=Papaver somniferum OX=3469 GN=T6ODM PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 3.2e-06
Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 0 

Query: 1   MEKEIRPTPSLITPHSPPLFTT-LTYQEFVRGLFTRKLDGKSYLDSMRI 49
           +E  I P  SLITP +P LF +  TY + V    TRKLDGKS+LDSMRI
Sbjct: 316 LESVIGPISSLITPETPALFKSGSTYGDLVEECKTRKLDGKSFLDSMRI 364

[Close]
BLAST of HG10013747 vs. ExPASy Swiss-Prot
Match: D4N502 (Codeine O-demethylase OS=Papaver somniferum OX=3469 GN=CODM PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.1e-06
Identity = 23/48 (47.92%), Postives = 33/48 (68.75%), Query Frame = 0 

Query: 1   MEKEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRI 49
           +E EI P  SL+TP +P LF    Y++ ++   +RKLDGKS+LD MR+
Sbjct: 313 LESEIGPISSLVTPETPALFKRGRYEDILKENLSRKLDGKSFLDYMRM 360

[Close]
BLAST of HG10013747 vs. ExPASy Swiss-Prot
Match: Q39224 (Protein SRG1 OS=Arabidopsis thaliana OX=3702 GN=SRG1 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 3.5e-05
Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 0 

Query: 1   MEKEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRI 49
           M KE+ P  SL+       F  LT +E+  GLF+R LDGK+YLD++RI
Sbjct: 311 MYKEVGPAKSLVERQKVARFKRLTMKEYNDGLFSRTLDGKAYLDALRI 358

[Close]
BLAST of HG10013747 vs. ExPASy TrEMBL
Match: A0A1S3CK11 (probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Cucumis melo OX=3656 GN=LOC103501850 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.9e-18
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = 0 

Query: 1   MEKEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRIHRPPT 54
           +EKEIRPTPSLITPHSPPLFTTLTYQE+VRG+F+RKLDGKSYLD+MRIH   T
Sbjct: 309 LEKEIRPTPSLITPHSPPLFTTLTYQEYVRGIFSRKLDGKSYLDAMRIHHLST 361

[Close]
BLAST of HG10013747 vs. ExPASy TrEMBL
Match: A0A0A0KZZ7 (Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G622820 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.1e-17
Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 0 

Query: 1   MEKEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRIHRPPT 54
           +EKEIRPTPSLITPHSPPLF TLTYQE+V+GLF+R LDGK+YLD+MRIH P T
Sbjct: 152 LEKEIRPTPSLITPHSPPLFRTLTYQEYVKGLFSRTLDGKTYLDAMRIHPPST 204

[Close]
BLAST of HG10013747 vs. ExPASy TrEMBL
Match: A0A6J1BUE5 (protein SRG1-like OS=Momordica charantia OX=3673 GN=LOC111004846 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-16
Identity = 43/52 (82.69%), Postives = 47/52 (90.38%), Query Frame = 0 

Query: 2   EKEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRIHRPPT 54
           EK IRP PSLITPHSPPLFT+LTYQ +V GLFTRKLDGKSYLD+MRI+ PPT
Sbjct: 345 EKLIRPAPSLITPHSPPLFTSLTYQHYVSGLFTRKLDGKSYLDAMRINHPPT 396

[Close]
BLAST of HG10013747 vs. ExPASy TrEMBL
Match: A0A6J1F704 (protein SRG1-like OS=Cucurbita moschata OX=3662 GN=LOC111442702 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.5e-16
Identity = 42/53 (79.25%), Postives = 49/53 (92.45%), Query Frame = 0 

Query: 1   MEKEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRIHRPPT 54
           +EKEI+  PSLITPHSPPLFTTLTYQ+FVR LF+RKLDGKS+LD++RIH PPT
Sbjct: 308 LEKEIKAIPSLITPHSPPLFTTLTYQQFVRLLFSRKLDGKSHLDTLRIHTPPT 360

[Close]
BLAST of HG10013747 vs. ExPASy TrEMBL
Match: A0A1S3CK25 (probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Cucumis melo OX=3656 GN=LOC103501866 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.0e-15
Identity = 38/49 (77.55%), Postives = 47/49 (95.92%), Query Frame = 0 

Query: 1   MEKEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRIH 50
           +EKEIRPTPSL+TPHSPPLF T+T+QE+VRGLF+R +DGKSYL++MRIH
Sbjct: 192 LEKEIRPTPSLVTPHSPPLFRTVTHQEYVRGLFSRTIDGKSYLEAMRIH 240

[Close]
BLAST of HG10013747 vs. TAIR 10
Match: AT4G25310.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 9.1e-09
Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 0 

Query: 3   KEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRI 49
           KEI P  SL+  H   LF TLT +E+  GLF+R+LDGK+YLD MRI
Sbjct: 308 KEIGPMRSLVERHKGALFKTLTTEEYFHGLFSRELDGKAYLDVMRI 353

[Close]
BLAST of HG10013747 vs. TAIR 10
Match: AT4G25300.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 2.2e-07
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 0 

Query: 3   KEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRI 49
           KEI P  SL+  H    F ++T +E+  GLF+R+LDGK+YLD MR+
Sbjct: 311 KEIGPMRSLVERHKAAFFKSVTTEEYFNGLFSRELDGKAYLDVMRL 356

[Close]
BLAST of HG10013747 vs. TAIR 10
Match: AT4G25300.2 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 2.2e-07
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 0 

Query: 3   KEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRI 49
           KEI P  SL+  H    F ++T +E+  GLF+R+LDGK+YLD MR+
Sbjct: 217 KEIGPMRSLVERHKAAFFKSVTTEEYFNGLFSRELDGKAYLDVMRL 262

[Close]
BLAST of HG10013747 vs. TAIR 10
Match: AT1G17010.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 48.5 bits (114), Expect = 1.9e-06
Identity = 22/48 (45.83%), Postives = 33/48 (68.75%), Query Frame = 0 

Query: 1   MEKEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRI 49
           M+KEI P  SL+       F +L  ++++ GLF+R+L GK+YLD+MRI
Sbjct: 311 MDKEIGPARSLVQRQEAAKFRSLKTKDYLNGLFSRELKGKAYLDAMRI 358

[Close]
BLAST of HG10013747 vs. TAIR 10
Match: AT1G17020.1 (senescence-related gene 1 )

HSP 1 Score: 48.1 bits (113), Expect = 2.5e-06
Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 0 

Query: 1   MEKEIRPTPSLITPHSPPLFTTLTYQEFVRGLFTRKLDGKSYLDSMRI 49
           M KE+ P  SL+       F  LT +E+  GLF+R LDGK+YLD++RI
Sbjct: 311 MYKEVGPAKSLVERQKVARFKRLTMKEYNDGLFSRTLDGKAYLDALRI 358

The following BLAST results are available for this feature:
BLAST of HG10013747 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008463796.11.0e-1784.91PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Cucumis melo][more]
XP_038897143.11.3e-1786.79protein SRG1-like [Benincasa hispida][more]
XP_004146011.38.5e-1781.13LOW QUALITY PROTEIN: protein SRG1 [Cucumis sativus][more]
KGN55530.28.5e-1781.13hypothetical protein Csa_012011 [Cucumis sativus][more]
XP_022131763.13.2e-1682.69protein SRG1-like [Momordica charantia][more]
BLAST of HG10013747 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
D4N5014.9e-0757.14Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum OX=34... [more]
D4N5003.2e-0657.14Thebaine 6-O-demethylase OS=Papaver somniferum OX=3469 GN=T6ODM PE=1 SV=1[more]
D4N5024.1e-0647.92Codeine O-demethylase OS=Papaver somniferum OX=3469 GN=CODM PE=1 SV=1[more]
Q392243.5e-0547.92Protein SRG1 OS=Arabidopsis thaliana OX=3702 GN=SRG1 PE=2 SV=1[more]
BLAST of HG10013747 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CK114.9e-1884.91probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Cucumis melo OX=3656 GN=... [more]
A0A0A0KZZ74.1e-1781.13Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G... [more]
A0A6J1BUE51.6e-1682.69protein SRG1-like OS=Momordica charantia OX=3673 GN=LOC111004846 PE=3 SV=1[more]
A0A6J1F7043.5e-1679.25protein SRG1-like OS=Cucurbita moschata OX=3662 GN=LOC111442702 PE=3 SV=1[more]
A0A1S3CK255.0e-1577.55probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Cucumis melo OX=3656 GN=... [more]
BLAST of HG10013747 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G25310.19.1e-0958.702-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [more]
AT4G25300.12.2e-0750.002-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [more]
AT4G25300.22.2e-0750.002-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [more]
AT1G17010.11.9e-0645.832-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [more]
AT1G17020.12.5e-0647.92senescence-related gene 1 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10013747.1HG10013747.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0051213 dioxygenase activity
molecular_function GO:0046872 metal ion binding