HG10013727 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCGCATCAGAACTCTTCACCGTCAAATCGATTCCCTTTTGGAACTTCGAAACCATCTCTTCAATTCACAGTCCATAAACTCCCTCCAATTTCATCCTCTTCCTTCTACTTCTCGAACTTTCTCGCTGAAAATCGAAGAGGGTATCGGACCAGAAATTGTGGCCGGAAAGAGGAATACACCTCCGGAGTTTCTGGTTAGCGAAGCCGCGAGATCGAACGGAAGTGTGCAGTATCGCGAAGGCGAAGGTAGAAATGAAGGCATTGTGCTGAAAGGAAAAGTGGGTTCGAAAGGAAGCGAGAAATTGACGAGGGAGGATGCTTTGCTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGATATTTATACAGGGAAGGATATTTTAATTATGCTAATTTCTTGCCCGATAACAAATTGGTTCTTAGTTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAGTAAGAAGAGTTTTGAATTTAGGTTTTAAGTTTAGTTATTCTTATGAATTCTCGTCGTTAGTGCGTTAATATTGGTATCTCTGTGACTCTGTTACGATTTTTTGTGTAATTTTTTGAGAATTGGTGTGAGGAGCTTATGTGTCTGATGAACTAGATAGCTTTAATCTTTTGCCACCAACGATTTCATTTATGGAGTTCGAAGTGCTAAGAAATTTGGATATATCGTGACTGGAATAAACCATATCTTATGTAATTGGAGGCAAATTTTTTTTTGTTATTTTGAACCAATTACCATATGTTGGCTTGTGCATTGATATTGGGAAACTATCCATGATTCTAGTTTTGAGCTTTTTCAAAACATGCTCTATGCATCTTGTGGCAATTAAGATGATGAAGAAATTGAGGTCATTTTCTCTTGGGGTTAGATTACTCTAACTACATTTAGTATCATAAATGTAAAAATGCTAGTATGAATCATTTTTAGATGCATTATTTTTTTGGGTAGGATTTTTAGATGCATTATTTTGATATTTAAGAGTACGGAAGCTATGAAAAAAATATTTCTAGTTCACTTTCAAAAGGACCATGGTCAGAGTCGAAAGTTTGATTTTCCATATACAAATCTTGGAATATCTGTTGCTATTACCATACCCTAACAAATGTTTGCTGGGTTGGCTGGTTTACAGTGGTTGGTTGGTTCAATTGGTTCATCTTTCAAAAGTCATCGTATTTTTTGTGTCAAAGTTAATGGTTCTATCCCCCACCCCTACTATTGTTCAACTCAAAAAGATATCCATCTACCAATTTGAGTATAGTTTAATTAGTATTGGCATTATTAACCCTCTACTAAAGAGATATCCACCTAAGGCATAACTGACCTATCTTGGTCTTCAATTTACTCTTCCCCTAGCCGATGCCTGTGCTTGTTCATTGTCTACCTGCTGCTTGATAATTGCTTGAAGCCTTATAGTACTGATAATTTCAAGATTGTACAAGACATTGACTTGTCAGATTATTCAGTGTAGGGTACTTAAAGTGTAATATTCCTATTAAGTTACAAAATCTAACATTCTGAATTCTGATTTTGAAGGCAATAATTTTTTCTATTTCATCTTTCTGGTTCTGGCAGTTGTGTTTCATTAAGAAGACATCCCCCTATTGTTTCACGTCTTGAATTCTGAGTCTTGGGATTTTCAGATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCCTTCTTTGGGTGCCCATCCACTGCAAGAAAAGATGTGTTTGCGGCTAAAAGACTGCGAAAATTTTTTAGAATCCAAGAAGACACAGTAAGCAAAAGCTCAGTAAATATTACCTTCCTCCTTCCATTACCATTTAATTATTTAGTAAAATTCTTTGGCTTTGTTTTCTCTCTTCAAATTATCCGCAGGTCTGTCACAAATGCATCTTGAGACAATCATGCAAGTACGTGAATCAAGGTGTTTGGAATGGGGGCACCAAGAATTTGAATTTAGCAGCCGTTTTGCAGGTTATTACTCAATACGCCTTGGAAGCTATACCAAAACAACTTACAATACCTGAAGATATAAAGGCTTCTGTAAGTCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGGGGAACTAG ATGTCTCGCATCAGAACTCTTCACCGTCAAATCGATTCCCTTTTGGAACTTCGAAACCATCTCTTCAATTCACAGTCCATAAACTCCCTCCAATTTCATCCTCTTCCTTCTACTTCTCGAACTTTCTCGCTGAAAATCGAAGAGGGTATCGGACCAGAAATTGTGGCCGGAAAGAGGAATACACCTCCGGAGTTTCTGGTTAGCGAAGCCGCGAGATCGAACGGAAGTGTGCAGTATCGCGAAGGCGAAGGTAGAAATGAAGGCATTGTGCTGAAAGGAAAAGTGGGTTCGAAAGGAAGCGAGAAATTGACGAGGGAGGATGCTTTGCTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGATATTTATACAGGGAAGGATATTTTAATTATGCTAATTTCTTGCCCGATAACAAATTGGTTCTTAGTTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCCTTCTTTGGGTGCCCATCCACTGCAAGAAAAGATGTGTTTGCGGCTAAAAGACTGCGAAAATTTTTTAGAATCCAAGAAGACACAGTCTGTCACAAATGCATCTTGAGACAATCATGCAAGTACGTGAATCAAGGTGTTTGGAATGGGGGCACCAAGAATTTGAATTTAGCAGCCGTTTTGCAGGTTATTACTCAATACGCCTTGGAAGCTATACCAAAACAACTTACAATACCTGAAGATATAAAGGCTTCTGTAAGTCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGGGGAACTAG ATGTCTCGCATCAGAACTCTTCACCGTCAAATCGATTCCCTTTTGGAACTTCGAAACCATCTCTTCAATTCACAGTCCATAAACTCCCTCCAATTTCATCCTCTTCCTTCTACTTCTCGAACTTTCTCGCTGAAAATCGAAGAGGGTATCGGACCAGAAATTGTGGCCGGAAAGAGGAATACACCTCCGGAGTTTCTGGTTAGCGAAGCCGCGAGATCGAACGGAAGTGTGCAGTATCGCGAAGGCGAAGGTAGAAATGAAGGCATTGTGCTGAAAGGAAAAGTGGGTTCGAAAGGAAGCGAGAAATTGACGAGGGAGGATGCTTTGCTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGATATTTATACAGGGAAGGATATTTTAATTATGCTAATTTCTTGCCCGATAACAAATTGGTTCTTAGTTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCCTTCTTTGGGTGCCCATCCACTGCAAGAAAAGATGTGTTTGCGGCTAAAAGACTGCGAAAATTTTTTAGAATCCAAGAAGACACAGTCTGTCACAAATGCATCTTGAGACAATCATGCAAGTACGTGAATCAAGGTGTTTGGAATGGGGGCACCAAGAATTTGAATTTAGCAGCCGTTTTGCAGGTTATTACTCAATACGCCTTGGAAGCTATACCAAAACAACTTACAATACCTGAAGATATAAAGGCTTCTGTAAGTCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGGGGAACTAG MSRIRTLHRQIDSLLELRNHLFNSQSINSLQFHPLPSTSRTFSLKIEEGIGPEIVAGKRNTPPEFLVSEAARSNGSVQYREGEGRNEGIVLKGKVGSKGSEKLTREDALLRKELSPDMEMFVRYLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNGGTKNLNLAAVLQVITQYALEAIPKQLTIPEDIKASVSRLLKEILKLSPTVSGN Homology
BLAST of HG10013727 vs. NCBI nr
Match: XP_038898284.1 (uncharacterized protein LOC120085986 [Benincasa hispida]) HSP 1 Score: 495.4 bits (1274), Expect = 3.4e-136 Identity = 252/285 (88.42%), Postives = 263/285 (92.28%), Query Frame = 0
BLAST of HG10013727 vs. NCBI nr
Match: XP_004146085.1 (uncharacterized protein LOC101222492 [Cucumis sativus] >KGN55046.1 hypothetical protein Csa_012594 [Cucumis sativus]) HSP 1 Score: 456.8 bits (1174), Expect = 1.3e-124 Identity = 234/285 (82.11%), Postives = 248/285 (87.02%), Query Frame = 0
BLAST of HG10013727 vs. NCBI nr
Match: KAG7024649.1 (hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 439.1 bits (1128), Expect = 2.9e-119 Identity = 230/288 (79.86%), Postives = 248/288 (86.11%), Query Frame = 0
BLAST of HG10013727 vs. NCBI nr
Match: KAA0066744.1 (uncharacterized protein E6C27_scaffold271G00820 [Cucumis melo var. makuwa] >TYK27892.1 uncharacterized protein E5676_scaffold384G00760 [Cucumis melo var. makuwa]) HSP 1 Score: 438.7 bits (1127), Expect = 3.8e-119 Identity = 230/285 (80.70%), Postives = 241/285 (84.56%), Query Frame = 0
BLAST of HG10013727 vs. NCBI nr
Match: KAG6591767.1 (hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 436.0 bits (1120), Expect = 2.4e-118 Identity = 229/288 (79.51%), Postives = 246/288 (85.42%), Query Frame = 0
BLAST of HG10013727 vs. ExPASy TrEMBL
Match: A0A0A0L4J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 6.5e-125 Identity = 234/285 (82.11%), Postives = 248/285 (87.02%), Query Frame = 0
BLAST of HG10013727 vs. ExPASy TrEMBL
Match: A0A5A7VHD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00760 PE=4 SV=1) HSP 1 Score: 438.7 bits (1127), Expect = 1.8e-119 Identity = 230/285 (80.70%), Postives = 241/285 (84.56%), Query Frame = 0
BLAST of HG10013727 vs. ExPASy TrEMBL
Match: A0A6J1F747 (uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC111442720 PE=4 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 2.0e-118 Identity = 229/286 (80.07%), Postives = 245/286 (85.66%), Query Frame = 0
BLAST of HG10013727 vs. ExPASy TrEMBL
Match: A0A6J1IGS8 (uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088 PE=4 SV=1) HSP 1 Score: 427.9 bits (1099), Expect = 3.2e-116 Identity = 225/288 (78.12%), Postives = 244/288 (84.72%), Query Frame = 0
BLAST of HG10013727 vs. ExPASy TrEMBL
Match: A0A6J1CC23 (uncharacterized protein LOC111009818 OS=Momordica charantia OX=3673 GN=LOC111009818 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 1.7e-77 Identity = 169/264 (64.02%), Postives = 183/264 (69.32%), Query Frame = 0
BLAST of HG10013727 vs. TAIR 10
Match: AT1G53460.1 (BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). ) HSP 1 Score: 191.4 bits (485), Expect = 9.8e-49 Identity = 104/225 (46.22%), Postives = 145/225 (64.44%), Query Frame = 0
BLAST of HG10013727 vs. TAIR 10
Match: AT1G55040.1 (zinc finger (Ran-binding) family protein ) HSP 1 Score: 67.8 bits (164), Expect = 1.6e-11 Identity = 40/129 (31.01%), Postives = 67/129 (51.94%), Query Frame = 0
BLAST of HG10013727 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein ) HSP 1 Score: 61.2 bits (147), Expect = 1.5e-09 Identity = 52/165 (31.52%), Postives = 82/165 (49.70%), Query Frame = 0
BLAST of HG10013727 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein ) HSP 1 Score: 61.2 bits (147), Expect = 1.5e-09 Identity = 52/165 (31.52%), Postives = 82/165 (49.70%), Query Frame = 0
BLAST of HG10013727 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein ) HSP 1 Score: 56.6 bits (135), Expect = 3.8e-08 Identity = 49/170 (28.82%), Postives = 79/170 (46.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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