HG10013727 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10013727
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRan BP2/NZF zinc finger-like superfamily protein
LocationChr02: 4146073 .. 4148228 (+)
RNA-Seq ExpressionHG10013727
SyntenyHG10013727
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCGCATCAGAACTCTTCACCGTCAAATCGATTCCCTTTTGGAACTTCGAAACCATCTCTTCAATTCACAGTCCATAAACTCCCTCCAATTTCATCCTCTTCCTTCTACTTCTCGAACTTTCTCGCTGAAAATCGAAGAGGGTATCGGACCAGAAATTGTGGCCGGAAAGAGGAATACACCTCCGGAGTTTCTGGTTAGCGAAGCCGCGAGATCGAACGGAAGTGTGCAGTATCGCGAAGGCGAAGGTAGAAATGAAGGCATTGTGCTGAAAGGAAAAGTGGGTTCGAAAGGAAGCGAGAAATTGACGAGGGAGGATGCTTTGCTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGATATTTATACAGGGAAGGATATTTTAATTATGCTAATTTCTTGCCCGATAACAAATTGGTTCTTAGTTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAGTAAGAAGAGTTTTGAATTTAGGTTTTAAGTTTAGTTATTCTTATGAATTCTCGTCGTTAGTGCGTTAATATTGGTATCTCTGTGACTCTGTTACGATTTTTTGTGTAATTTTTTGAGAATTGGTGTGAGGAGCTTATGTGTCTGATGAACTAGATAGCTTTAATCTTTTGCCACCAACGATTTCATTTATGGAGTTCGAAGTGCTAAGAAATTTGGATATATCGTGACTGGAATAAACCATATCTTATGTAATTGGAGGCAAATTTTTTTTTGTTATTTTGAACCAATTACCATATGTTGGCTTGTGCATTGATATTGGGAAACTATCCATGATTCTAGTTTTGAGCTTTTTCAAAACATGCTCTATGCATCTTGTGGCAATTAAGATGATGAAGAAATTGAGGTCATTTTCTCTTGGGGTTAGATTACTCTAACTACATTTAGTATCATAAATGTAAAAATGCTAGTATGAATCATTTTTAGATGCATTATTTTTTTGGGTAGGATTTTTAGATGCATTATTTTGATATTTAAGAGTACGGAAGCTATGAAAAAAATATTTCTAGTTCACTTTCAAAAGGACCATGGTCAGAGTCGAAAGTTTGATTTTCCATATACAAATCTTGGAATATCTGTTGCTATTACCATACCCTAACAAATGTTTGCTGGGTTGGCTGGTTTACAGTGGTTGGTTGGTTCAATTGGTTCATCTTTCAAAAGTCATCGTATTTTTTGTGTCAAAGTTAATGGTTCTATCCCCCACCCCTACTATTGTTCAACTCAAAAAGATATCCATCTACCAATTTGAGTATAGTTTAATTAGTATTGGCATTATTAACCCTCTACTAAAGAGATATCCACCTAAGGCATAACTGACCTATCTTGGTCTTCAATTTACTCTTCCCCTAGCCGATGCCTGTGCTTGTTCATTGTCTACCTGCTGCTTGATAATTGCTTGAAGCCTTATAGTACTGATAATTTCAAGATTGTACAAGACATTGACTTGTCAGATTATTCAGTGTAGGGTACTTAAAGTGTAATATTCCTATTAAGTTACAAAATCTAACATTCTGAATTCTGATTTTGAAGGCAATAATTTTTTCTATTTCATCTTTCTGGTTCTGGCAGTTGTGTTTCATTAAGAAGACATCCCCCTATTGTTTCACGTCTTGAATTCTGAGTCTTGGGATTTTCAGATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCCTTCTTTGGGTGCCCATCCACTGCAAGAAAAGATGTGTTTGCGGCTAAAAGACTGCGAAAATTTTTTAGAATCCAAGAAGACACAGTAAGCAAAAGCTCAGTAAATATTACCTTCCTCCTTCCATTACCATTTAATTATTTAGTAAAATTCTTTGGCTTTGTTTTCTCTCTTCAAATTATCCGCAGGTCTGTCACAAATGCATCTTGAGACAATCATGCAAGTACGTGAATCAAGGTGTTTGGAATGGGGGCACCAAGAATTTGAATTTAGCAGCCGTTTTGCAGGTTATTACTCAATACGCCTTGGAAGCTATACCAAAACAACTTACAATACCTGAAGATATAAAGGCTTCTGTAAGTCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGGGGAACTAG

mRNA sequence

ATGTCTCGCATCAGAACTCTTCACCGTCAAATCGATTCCCTTTTGGAACTTCGAAACCATCTCTTCAATTCACAGTCCATAAACTCCCTCCAATTTCATCCTCTTCCTTCTACTTCTCGAACTTTCTCGCTGAAAATCGAAGAGGGTATCGGACCAGAAATTGTGGCCGGAAAGAGGAATACACCTCCGGAGTTTCTGGTTAGCGAAGCCGCGAGATCGAACGGAAGTGTGCAGTATCGCGAAGGCGAAGGTAGAAATGAAGGCATTGTGCTGAAAGGAAAAGTGGGTTCGAAAGGAAGCGAGAAATTGACGAGGGAGGATGCTTTGCTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGATATTTATACAGGGAAGGATATTTTAATTATGCTAATTTCTTGCCCGATAACAAATTGGTTCTTAGTTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCCTTCTTTGGGTGCCCATCCACTGCAAGAAAAGATGTGTTTGCGGCTAAAAGACTGCGAAAATTTTTTAGAATCCAAGAAGACACAGTCTGTCACAAATGCATCTTGAGACAATCATGCAAGTACGTGAATCAAGGTGTTTGGAATGGGGGCACCAAGAATTTGAATTTAGCAGCCGTTTTGCAGGTTATTACTCAATACGCCTTGGAAGCTATACCAAAACAACTTACAATACCTGAAGATATAAAGGCTTCTGTAAGTCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGGGGAACTAG

Coding sequence (CDS)

ATGTCTCGCATCAGAACTCTTCACCGTCAAATCGATTCCCTTTTGGAACTTCGAAACCATCTCTTCAATTCACAGTCCATAAACTCCCTCCAATTTCATCCTCTTCCTTCTACTTCTCGAACTTTCTCGCTGAAAATCGAAGAGGGTATCGGACCAGAAATTGTGGCCGGAAAGAGGAATACACCTCCGGAGTTTCTGGTTAGCGAAGCCGCGAGATCGAACGGAAGTGTGCAGTATCGCGAAGGCGAAGGTAGAAATGAAGGCATTGTGCTGAAAGGAAAAGTGGGTTCGAAAGGAAGCGAGAAATTGACGAGGGAGGATGCTTTGCTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGATATTTATACAGGGAAGGATATTTTAATTATGCTAATTTCTTGCCCGATAACAAATTGGTTCTTAGTTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCCTTCTTTGGGTGCCCATCCACTGCAAGAAAAGATGTGTTTGCGGCTAAAAGACTGCGAAAATTTTTTAGAATCCAAGAAGACACAGTCTGTCACAAATGCATCTTGAGACAATCATGCAAGTACGTGAATCAAGGTGTTTGGAATGGGGGCACCAAGAATTTGAATTTAGCAGCCGTTTTGCAGGTTATTACTCAATACGCCTTGGAAGCTATACCAAAACAACTTACAATACCTGAAGATATAAAGGCTTCTGTAAGTCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGGGGAACTAG

Protein sequence

MSRIRTLHRQIDSLLELRNHLFNSQSINSLQFHPLPSTSRTFSLKIEEGIGPEIVAGKRNTPPEFLVSEAARSNGSVQYREGEGRNEGIVLKGKVGSKGSEKLTREDALLRKELSPDMEMFVRYLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNGGTKNLNLAAVLQVITQYALEAIPKQLTIPEDIKASVSRLLKEILKLSPTVSGN
Homology
BLAST of HG10013727 vs. NCBI nr
Match: XP_038898284.1 (uncharacterized protein LOC120085986 [Benincasa hispida])

HSP 1 Score: 495.4 bits (1274), Expect = 3.4e-136
Identity = 252/285 (88.42%), Postives = 263/285 (92.28%), Query Frame = 0

Query: 1   MSRIRTLHRQIDSLLELRNHLFNSQSINSLQFHPLPSTSRTFSLKIEEGIGPEIVAGKRN 60
           MSR R LH +IDSL  LRN LF+SQS NS QFH LPSTS T SLKIEE IGPEI+ GK+N
Sbjct: 1   MSRFRPLHSRIDSLFNLRNRLFSSQSTNSHQFHLLPSTSPTPSLKIEERIGPEIIPGKKN 60

Query: 61  TPPEFLVSEAARSNGSVQYREGEGRNEGIVLKGKVGSKGSEKLTREDALLRKELSPDMEM 120
           TPPEFL SEAA SNGSVQ R+GE RNE IVLKGKVGSKGSEKLTR+DALLRKELSPDMEM
Sbjct: 61  TPPEFLCSEAANSNGSVQSRKGESRNEDIVLKGKVGSKGSEKLTRKDALLRKELSPDMEM 120

Query: 121 FVRYLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLR 180
           FVR+LYREGYFNYANFLPDNKLVLS FECRHGRDFIKSAA+RFGRDNQEIAKWLSGSDLR
Sbjct: 121 FVRHLYREGYFNYANFLPDNKLVLSNFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLR 180

Query: 181 KVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNGGTKNLNLA 240
           KVAFFGCPSTAR+DVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNG TKNLNLA
Sbjct: 181 KVAFFGCPSTAREDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNGDTKNLNLA 240

Query: 241 AVLQVITQYALEAIPKQLTIPEDIKASVSRLLKEILKLSPTVSGN 286
           AVLQVITQYALEAIPKQL IPED+KAS+SRLLKEILKLSPTVS N
Sbjct: 241 AVLQVITQYALEAIPKQLIIPEDMKASLSRLLKEILKLSPTVSRN 285

BLAST of HG10013727 vs. NCBI nr
Match: XP_004146085.1 (uncharacterized protein LOC101222492 [Cucumis sativus] >KGN55046.1 hypothetical protein Csa_012594 [Cucumis sativus])

HSP 1 Score: 456.8 bits (1174), Expect = 1.3e-124
Identity = 234/285 (82.11%), Postives = 248/285 (87.02%), Query Frame = 0

Query: 1   MSRIRTLHRQIDSLLELRNHLFNSQSINSLQFHPLPSTSRTFSLKIEEGIGPEIVAGKRN 60
           MSR R LH QI         LFNSQS  SLQFH LPSTSR+FSL I E I PEIV G RN
Sbjct: 1   MSRFRPLHSQI--------QLFNSQSTISLQFHLLPSTSRSFSLNIGERIAPEIVPGNRN 60

Query: 61  TPPEFLVSEAARSNGSVQYREGEGRNEGIVLKGKVGSKGSEKLTREDALLRKELSPDMEM 120
           TPP FL  EAA S+GSV+ +EG+GRNE  VLKGKVGS+G++KLTREDALLRK+LSPDMEM
Sbjct: 61  TPPPFLCREAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDMEM 120

Query: 121 FVRYLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLR 180
           FVR+LY+EGYFNYANFLPDNK VLSYFECRHGRDFIKSAA+RFGRDNQEIAKWLSGSDLR
Sbjct: 121 FVRHLYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLR 180

Query: 181 KVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNGGTKNLNLA 240
           KVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWN  TKNLNL 
Sbjct: 181 KVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLG 240

Query: 241 AVLQVITQYALEAIPKQLTIPEDIKASVSRLLKEILKLSPTVSGN 286
            VLQV TQYALEAIP+QL IPED+KASVSRLLKEIL LSPTVS N
Sbjct: 241 VVLQVTTQYALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN 277

BLAST of HG10013727 vs. NCBI nr
Match: KAG7024649.1 (hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 439.1 bits (1128), Expect = 2.9e-119
Identity = 230/288 (79.86%), Postives = 248/288 (86.11%), Query Frame = 0

Query: 1   MSRIRTLHRQIDSLLELRNHLFNSQSINSLQFHPLPST---SRTFSLKIEEGIGPEIVAG 60
           MSR R LHR+IDS  +L ++ F+SQS++SLQFH LPST   SRTFS KI+ GIGPEIV  
Sbjct: 1   MSRFRVLHRRIDS--QLGSYFFSSQSMSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60

Query: 61  KRNTPPEFLVSEAARSNGSVQYREGEGRNEGIVLKGKVGSKGSEKLTREDALLRKELSPD 120
           KRN   + +V++ ARS GS        RNE  VLKG+V SKG EKLTREDAL+RKELSPD
Sbjct: 61  KRNIRSDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREKLTREDALVRKELSPD 120

Query: 121 MEMFVRYLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGS 180
           MEMFVR+LYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGS
Sbjct: 121 MEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGS 180

Query: 181 DLRKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNGGTKNL 240
           DLRKVA FGCPSTAR+DVFAAKRLRKFFRIQEDTVCH C LRQSCKYVNQGVWN GTKNL
Sbjct: 181 DLRKVALFGCPSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNL 240

Query: 241 NLAAVLQVITQYALEAIPKQLTIPEDIKASVSRLLKEILKLSPTVSGN 286
           NLA V+QVITQY L+AIPKQL IPEDIKASVSRLLKEILKLSPTVS N
Sbjct: 241 NLAVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

BLAST of HG10013727 vs. NCBI nr
Match: KAA0066744.1 (uncharacterized protein E6C27_scaffold271G00820 [Cucumis melo var. makuwa] >TYK27892.1 uncharacterized protein E5676_scaffold384G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 438.7 bits (1127), Expect = 3.8e-119
Identity = 230/285 (80.70%), Postives = 241/285 (84.56%), Query Frame = 0

Query: 1   MSRIRTLHRQIDSLLELRNHLFNSQSINSLQFHPLPSTSRTFSLKIEEGIGPEIVAGKRN 60
           MSR R L+ QI         LFNSQS  SLQFH LPSTSR+FSLKI EGI PEIV  K N
Sbjct: 1   MSRFRPLYSQI--------LLFNSQSTISLQFHLLPSTSRSFSLKIGEGIEPEIVPAKTN 60

Query: 61  TPPEFLVSEAARSNGSVQYREGEGRNEGIVLKGKVGSKGSEKLTREDALLRKELSPDMEM 120
           TPP FL  EAA SNGSV+  EG+G NE  VLKGKVGS+G++KL REDALLRKELSPDMEM
Sbjct: 61  TPPAFLSREAANSNGSVKSLEGKGGNEETVLKGKVGSEGNKKLAREDALLRKELSPDMEM 120

Query: 121 FVRYLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLR 180
           F R+LYREGYFNYANFLP NK VLSYFECR GR+FIKS A+RFGRDNQEIAKWLSGSDLR
Sbjct: 121 FARHLYREGYFNYANFLPVNKFVLSYFECRRGRNFIKSTAQRFGRDNQEIAKWLSGSDLR 180

Query: 181 KVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNGGTKNLNLA 240
           KVA FGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWN  TKNLNL 
Sbjct: 181 KVALFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLG 240

Query: 241 AVLQVITQYALEAIPKQLTIPEDIKASVSRLLKEILKLSPTVSGN 286
            VLQVITQYALEAIP+QL IPEDIKASVSRLLKEIL LS TVS N
Sbjct: 241 VVLQVITQYALEAIPEQLIIPEDIKASVSRLLKEILNLSQTVSRN 277

BLAST of HG10013727 vs. NCBI nr
Match: KAG6591767.1 (hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 436.0 bits (1120), Expect = 2.4e-118
Identity = 229/288 (79.51%), Postives = 246/288 (85.42%), Query Frame = 0

Query: 1   MSRIRTLHRQIDSLLELRNHLFNSQSINSLQFHPLPST---SRTFSLKIEEGIGPEIVAG 60
           MSR R LHR+IDS  +L ++ F+SQS +SLQFH LPST   SRTFS KI+ GIGPEIV  
Sbjct: 1   MSRFRVLHRRIDS--QLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60

Query: 61  KRNTPPEFLVSEAARSNGSVQYREGEGRNEGIVLKGKVGSKGSEKLTREDALLRKELSPD 120
           KRN   + +V++ ARS GS        RNE  VLKG+V SKG EKLTREDAL+RKELSPD
Sbjct: 61  KRNIRSDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREKLTREDALVRKELSPD 120

Query: 121 MEMFVRYLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGS 180
           MEMFVR+LYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGS
Sbjct: 121 MEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGS 180

Query: 181 DLRKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNGGTKNL 240
           DLRKVA FGCPS AR+DVFAAKRLRKFFRIQEDTVCH C LRQSCKYVNQGVWN GTKNL
Sbjct: 181 DLRKVALFGCPSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNL 240

Query: 241 NLAAVLQVITQYALEAIPKQLTIPEDIKASVSRLLKEILKLSPTVSGN 286
           NLA V+QVITQY L+AIPKQL IPEDIKASVSRLLKEILKLSPTVS N
Sbjct: 241 NLAVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

BLAST of HG10013727 vs. ExPASy TrEMBL
Match: A0A0A0L4J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 6.5e-125
Identity = 234/285 (82.11%), Postives = 248/285 (87.02%), Query Frame = 0

Query: 1   MSRIRTLHRQIDSLLELRNHLFNSQSINSLQFHPLPSTSRTFSLKIEEGIGPEIVAGKRN 60
           MSR R LH QI         LFNSQS  SLQFH LPSTSR+FSL I E I PEIV G RN
Sbjct: 1   MSRFRPLHSQI--------QLFNSQSTISLQFHLLPSTSRSFSLNIGERIAPEIVPGNRN 60

Query: 61  TPPEFLVSEAARSNGSVQYREGEGRNEGIVLKGKVGSKGSEKLTREDALLRKELSPDMEM 120
           TPP FL  EAA S+GSV+ +EG+GRNE  VLKGKVGS+G++KLTREDALLRK+LSPDMEM
Sbjct: 61  TPPPFLCREAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDMEM 120

Query: 121 FVRYLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLR 180
           FVR+LY+EGYFNYANFLPDNK VLSYFECRHGRDFIKSAA+RFGRDNQEIAKWLSGSDLR
Sbjct: 121 FVRHLYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLR 180

Query: 181 KVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNGGTKNLNLA 240
           KVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWN  TKNLNL 
Sbjct: 181 KVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLG 240

Query: 241 AVLQVITQYALEAIPKQLTIPEDIKASVSRLLKEILKLSPTVSGN 286
            VLQV TQYALEAIP+QL IPED+KASVSRLLKEIL LSPTVS N
Sbjct: 241 VVLQVTTQYALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN 277

BLAST of HG10013727 vs. ExPASy TrEMBL
Match: A0A5A7VHD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00760 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.8e-119
Identity = 230/285 (80.70%), Postives = 241/285 (84.56%), Query Frame = 0

Query: 1   MSRIRTLHRQIDSLLELRNHLFNSQSINSLQFHPLPSTSRTFSLKIEEGIGPEIVAGKRN 60
           MSR R L+ QI         LFNSQS  SLQFH LPSTSR+FSLKI EGI PEIV  K N
Sbjct: 1   MSRFRPLYSQI--------LLFNSQSTISLQFHLLPSTSRSFSLKIGEGIEPEIVPAKTN 60

Query: 61  TPPEFLVSEAARSNGSVQYREGEGRNEGIVLKGKVGSKGSEKLTREDALLRKELSPDMEM 120
           TPP FL  EAA SNGSV+  EG+G NE  VLKGKVGS+G++KL REDALLRKELSPDMEM
Sbjct: 61  TPPAFLSREAANSNGSVKSLEGKGGNEETVLKGKVGSEGNKKLAREDALLRKELSPDMEM 120

Query: 121 FVRYLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLR 180
           F R+LYREGYFNYANFLP NK VLSYFECR GR+FIKS A+RFGRDNQEIAKWLSGSDLR
Sbjct: 121 FARHLYREGYFNYANFLPVNKFVLSYFECRRGRNFIKSTAQRFGRDNQEIAKWLSGSDLR 180

Query: 181 KVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNGGTKNLNLA 240
           KVA FGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWN  TKNLNL 
Sbjct: 181 KVALFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLG 240

Query: 241 AVLQVITQYALEAIPKQLTIPEDIKASVSRLLKEILKLSPTVSGN 286
            VLQVITQYALEAIP+QL IPEDIKASVSRLLKEIL LS TVS N
Sbjct: 241 VVLQVITQYALEAIPEQLIIPEDIKASVSRLLKEILNLSQTVSRN 277

BLAST of HG10013727 vs. ExPASy TrEMBL
Match: A0A6J1F747 (uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC111442720 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 2.0e-118
Identity = 229/286 (80.07%), Postives = 245/286 (85.66%), Query Frame = 0

Query: 1   MSRIRTLHRQIDSLLELRNHLFNSQSINSLQFHPLPST---SRTFSLKIEEGIGPEIVAG 60
           MSR R LHR+IDS  +L ++ F+SQS NSLQFH LPST   SRTFS KI+ GIGPEIV  
Sbjct: 1   MSRFRVLHRRIDS--QLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60

Query: 61  KRNTPPEFLVSEAARSNGSVQYREGEGRNEGIVLKGKVGSKGSEKLTREDALLRKELSPD 120
           KRN   + +V++ ARS GS        RNE  VLKG+V SKG EKLTREDAL+RKELSPD
Sbjct: 61  KRNIRLDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREKLTREDALVRKELSPD 120

Query: 121 MEMFVRYLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGS 180
           MEMFVR+LYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGS
Sbjct: 121 MEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGS 180

Query: 181 DLRKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNGGTKNL 240
           DLRKVA FGCPSTAR+DVFAAKRLRKFF IQEDTVCH C LRQSCKYVNQGVWN GTKNL
Sbjct: 181 DLRKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNL 240

Query: 241 NLAAVLQVITQYALEAIPKQLTIPEDIKASVSRLLKEILKLSPTVS 284
           NLA V+QVITQY L+AIPKQL IPEDIKASVSRLLKEILKLSPTVS
Sbjct: 241 NLAVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVS 276

BLAST of HG10013727 vs. ExPASy TrEMBL
Match: A0A6J1IGS8 (uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.2e-116
Identity = 225/288 (78.12%), Postives = 244/288 (84.72%), Query Frame = 0

Query: 1   MSRIRTLHRQIDSLLELRNHLFNSQSINSLQFHPLPST---SRTFSLKIEEGIGPEIVAG 60
           MSR R LHR+IDS  +L ++ F+SQS NSLQFH LPST   SRTFS KI+ GIGPEIV  
Sbjct: 1   MSRFRVLHRRIDS--QLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60

Query: 61  KRNTPPEFLVSEAARSNGSVQYREGEGRNEGIVLKGKVGSKGSEKLTREDALLRKELSPD 120
           KRN   + +V++ ARS GS        RNE  VLKG+V SKG E L RE+AL+RKELSPD
Sbjct: 61  KRNIRSDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREILKRENALVRKELSPD 120

Query: 121 MEMFVRYLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGS 180
           MEMFVR+LYREGYFNY+NFLPDNKLVLSYFECRHGRDFIKSAAERF RDNQEIAKWLSGS
Sbjct: 121 MEMFVRHLYREGYFNYSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGS 180

Query: 181 DLRKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNGGTKNL 240
           DLRKVA FGCPSTAR+DVFAAKRLRKFFRIQEDTVCH C LRQSCKYVNQGVWN GTKNL
Sbjct: 181 DLRKVALFGCPSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNL 240

Query: 241 NLAAVLQVITQYALEAIPKQLTIPEDIKASVSRLLKEILKLSPTVSGN 286
           NLA V++VITQY L+AIPKQL IPEDIKASVSRLLKEILKLSPTVS N
Sbjct: 241 NLAVVMKVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

BLAST of HG10013727 vs. ExPASy TrEMBL
Match: A0A6J1CC23 (uncharacterized protein LOC111009818 OS=Momordica charantia OX=3673 GN=LOC111009818 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.7e-77
Identity = 169/264 (64.02%), Postives = 183/264 (69.32%), Query Frame = 0

Query: 1   MSRIRTLHRQIDSLLELRNHLFNSQSINSLQFHPLPSTS---RTFSLKIEEGIGPEIVAG 60
           MS+ R LHR IDS L+LR H F SQS +SLQ H L S S   R FSLKIEEGIGPEIV  
Sbjct: 1   MSQFRALHRHIDSYLKLRYHFFCSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV 60

Query: 61  KRNTPPEFLVSEAARSNGSVQYREGEGRNEGIVLKGKVG------------SKGSEKLT- 120
            R+   +F+V  A RSN S + RE E RN+  VL+G  G            S GS KLT 
Sbjct: 61  NRDIRTDFVVDGAVRSNRSAECRERERRNQDNVLEGSSGESERGAGWLRADSGGSGKLTR 120

Query: 121 -------------------------REDALLRKELSPDMEMFVRYLYREGYFNYANFLPD 180
                                    REDAL+RKELSPD+EM VR+LY EGYF+YANFLPD
Sbjct: 121 KGKPGSLYVLVSKQNGCTERREVRMREDALVRKELSPDIEMLVRHLYGEGYFSYANFLPD 180

Query: 181 NKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVAFFGCPSTARKDVFAAK 224
           NKLVLSYFE RHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVA  GCPSTARKDVF+AK
Sbjct: 181 NKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALLGCPSTARKDVFSAK 240

BLAST of HG10013727 vs. TAIR 10
Match: AT1G53460.1 (BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). )

HSP 1 Score: 191.4 bits (485), Expect = 9.8e-49
Identity = 104/225 (46.22%), Postives = 145/225 (64.44%), Query Frame = 0

Query: 58  KRNTPPEFLVSEAARSNGSVQYREGEGRNEGIVLKGKVGSKGSEKLTREDALLRKELSPD 117
           K+    E ++SE      ++ Y+  +G  E  V   K  SK  E + R    + KEL  +
Sbjct: 93  KKKQKGEVVISEQNEKRHNL-YKLFKGDEEKEV---KKHSKEKEDVIR----VYKELPIE 152

Query: 118 MEMFVRYLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGS 177
           M  FVR L++EGY N ANF+   KL +   +  + R F+K AAERFG+D QEIAKWLSGS
Sbjct: 153 MVSFVRLLHKEGYLNKANFITGEKLDMGNLDEEYARTFVKFAAERFGKDYQEIAKWLSGS 212

Query: 178 DLRKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNGGTKNL 237
           DL+K+  FGCPS  ++ VFAAK LR FF I E+ VC KC+L++ CK+ NQ VW+G TK+L
Sbjct: 213 DLKKIVLFGCPSLEKRAVFAAKTLRNFFDIHENNVCEKCVLKEKCKFPNQSVWDGKTKHL 272

Query: 238 NLAAVLQVITQYALEAIPKQLTIPEDIKASVSRLLKEILKLSPTV 283
           +L+ V++VIT Y L+    +L +P++++ SVSRLL EI  LS T+
Sbjct: 273 HLSVVMKVITLYPLDLTHPKLQVPQEVQDSVSRLLTEIQNLSRTI 309

BLAST of HG10013727 vs. TAIR 10
Match: AT1G55040.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-11
Identity = 40/129 (31.01%), Postives = 67/129 (51.94%), Query Frame = 0

Query: 156 IKSAAERFGRDNQEIAKWLSGSDLRKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHK 215
           +++A   FG+D  +I + LS +D++ +   GCP+T RK VF+ K LRK   + E  VC  
Sbjct: 206 VQNACSNFGKDRFDILRSLSRNDIQILVGHGCPATDRKVVFSGKLLRKRVHLDEGDVCSS 265

Query: 216 CILRQSCKYVNQGVWNGGTKNLNLAAVLQVITQYALEAI-----PKQLTIPEDIKASVSR 275
           C LR SC+     +            +++++  Y  + +      K L   + +K+ V +
Sbjct: 266 CSLRNSCE--KAFLLTNKEDEARTIDLMRILFTYGFDPLNGTVANKSLLKKKSVKSVVRK 325

Query: 276 LLKEILKLS 280
           LL EI+KLS
Sbjct: 326 LLHEIVKLS 332

BLAST of HG10013727 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.5e-09
Identity = 52/165 (31.52%), Postives = 82/165 (49.70%), Query Frame = 0

Query: 125 LYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVAF 184
           L ++GYF   + +P    ++S  E  H    I++A   F R    + + LS  D++ +A 
Sbjct: 56  LAKKGYFE-ESLIP----LMSSKESNH----IRTACLNFARHRFTLVRNLSKKDIKVIAG 115

Query: 185 FGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSC-KYVNQGVWNGGTKNLNLAAVL 244
            GCPST RK V + KRLR +  I E  VC  C LR  C +   Q   + G + ++   V+
Sbjct: 116 CGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEGARTID---VM 175

Query: 245 QVITQYALEAIPK-------QLTIPEDIKASVSRLLKEILKLSPT 282
           +++  Y L++I         Q  + ED   SV +LL+E +  S T
Sbjct: 176 RLLLTYGLDSISPTVENRACQTKLVED---SVRKLLRESVAYSLT 205

BLAST of HG10013727 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.5e-09
Identity = 52/165 (31.52%), Postives = 82/165 (49.70%), Query Frame = 0

Query: 125 LYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVAF 184
           L ++GYF   + +P    ++S  E  H    I++A   F R    + + LS  D++ +A 
Sbjct: 56  LAKKGYFE-ESLIP----LMSSKESNH----IRTACLNFARHRFTLVRNLSKKDIKVIAG 115

Query: 185 FGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSC-KYVNQGVWNGGTKNLNLAAVL 244
            GCPST RK V + KRLR +  I E  VC  C LR  C +   Q   + G + ++   V+
Sbjct: 116 CGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEGARTID---VM 175

Query: 245 QVITQYALEAIPK-------QLTIPEDIKASVSRLLKEILKLSPT 282
           +++  Y L++I         Q  + ED   SV +LL+E +  S T
Sbjct: 176 RLLLTYGLDSISPTVENRACQTKLVED---SVRKLLRESVAYSLT 205

BLAST of HG10013727 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 56.6 bits (135), Expect = 3.8e-08
Identity = 49/170 (28.82%), Postives = 79/170 (46.47%), Query Frame = 0

Query: 116 PDMEMFVRYLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLS 175
           P+   FV  L  +GYF       D +    Y E       +K A   F RD  ++ + LS
Sbjct: 63  PEWITFVDRLKTKGYFT-----KDTEDDTVYQE----MILVKDACLSFARDRYDVLRSLS 122

Query: 176 GSDLRKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSC--KYVNQGVWNGG 235
             D++ +   GCP+  RK V ++KR+R   ++ E  VC  C LR SC   YV   +    
Sbjct: 123 SGDVQALVERGCPNLFRKTVNSSKRIRAHVKLNEGDVCGSCDLRSSCDRAYV---ILKDT 182

Query: 236 TKNLNLAAVLQVITQYALEAIP-KQLTIP---EDIKASVSRLLKEILKLS 280
             +     V++++   AL++I   +  +P   E +  S  RLL E+++ S
Sbjct: 183 EADARTVDVMRLLLFNALDSIVISRGEVPPGKELVHESARRLLLELVEFS 220

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038898284.13.4e-13688.42uncharacterized protein LOC120085986 [Benincasa hispida][more]
XP_004146085.11.3e-12482.11uncharacterized protein LOC101222492 [Cucumis sativus] >KGN55046.1 hypothetical ... [more]
KAG7024649.12.9e-11979.86hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAA0066744.13.8e-11980.70uncharacterized protein E6C27_scaffold271G00820 [Cucumis melo var. makuwa] >TYK2... [more]
KAG6591767.12.4e-11879.51hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L4J96.5e-12582.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1[more]
A0A5A7VHD01.8e-11980.70Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1F7472.0e-11880.07uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC1114427... [more]
A0A6J1IGS83.2e-11678.13uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088... [more]
A0A6J1CC231.7e-7764.02uncharacterized protein LOC111009818 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
Match NameE-valueIdentityDescription
AT1G53460.19.8e-4946.22BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfa... [more]
AT1G55040.11.6e-1131.01zinc finger (Ran-binding) family protein [more]
AT1G70650.11.5e-0931.52Ran BP2/NZF zinc finger-like superfamily protein [more]
AT1G70650.21.5e-0931.52Ran BP2/NZF zinc finger-like superfamily protein [more]
AT1G48570.13.8e-0828.82zinc finger (Ran-binding) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23111:SF24OS01G0203300 PROTEINcoord: 87..278
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 87..278

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10013727.1HG10013727.1mRNA