HG10013716 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013716
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ubiquitin domain-containing protein
Location	Chr02: 4046859 .. 4050442 (-)
RNA-Seq Expression	HG10013716
Synteny	HG10013716

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTGTGCCGGATCGTCGCAGGCCAAAGGCGACGGTGAGATTATCCTTCAACTTACTTTTCCATTTTCTGTTTGTTTTCCCAGATTCCTCTTCTGGGAAATGAAGGATTGTCATCTTCTATCTCATGCTTAATTCTGGGTTTTTACTCGTTTTCAATACTACGATGAATTTGGCAGTGACCCCACTTTGATGGAGTGGTTAATCGTGTTTCGGAGAAGTGTGTGTGGAATGCGAGATGAGAATTTGTGGATTTGAATCGGCTTTATTGTCAAGCGAATAGATTGTTGGCATTTTAGTCTATGTGATTCACTGATTTCCTTTGAGCTTGTAGTGGATGATTGGTTTTCCCCTGAGTGTAATTTGCGTTTTTATTGCCTTTTCGTTTTAGGACATTTGGTTTTGAGCTTCTTAAGCTTGTAATTATTAGTCTTGAAGAGCTGAGATTGATTGTTTTTCATTTAGCTCTAGCAATTGATTTGATTGCTTAAGTTTTTAATTGGAATTGACTGTGGTATTTTTTCATCATTTTATTGGGAATGTCAATTTAGGGAGGATTAATTCTTTGTATCTCATACACCCCTGCGGTGATTGCAAAGCCTCTTTGGGCTAGTTGGCTGAACTCTTTTGGTCTTTGTTGGGTTTGGAATAGAGCCTGCTTCGCCACAGTGGAGGAGGTGCTTTTTTGTTTGTCTTTACGCAGTAAGGGTAAAGTCTTGTGATTGTGGCACGCCAGTTTCTTCACTATCATTTGATTTTGGGGTATTTGGCTTGAGTCTAATGATAGGATCTTTAGACAGGTCTCAGGTCATGTGGTGAAGCTTGGGAGTTAGCTAGATTTAATGCCTCCATTTGAGCATTTGTCATAAGGCCTTTTTGTAATTATAGTCTTGGTTTGATTTTGCTGCATTGGATCCCTTTTCTGTAGTTTGTTCTTGGGCTCACTTATTTTTTTGTTTGCCCTTGTAATTTTTTCGTTTTTTCTCAAAGGAATTTGAAAACAGTGTTAATTTTGTTGATCTCCCTCGTGGAGTTGAGTTTTGGAAGCTGATATGATACAATTATTAACGAAAGGATTGAAATATTCATAATAATTCTCATGGTTATGGGGAATTTAATGTTAACATTCTTAGCAAGATGGCTACTGTGGTGGCTTCTTATTTTGTAATGTTGATGTGATTAATGTAATTGCCATTTTTCTTATGAAATTCAGCCTCTTCAACTTTATTTCTTCAATTGTTGTTCATCAGATGTTAATCTCAAAAGTTATAAGGAACTTATGCCATCCACTTAGTCACTTGAAGATTCTTTTTGATTCAGGGCCTGTGAAAAAAATTAGGAAGCCTAAACCTTGGAAGCATCCCCAACCAATAACAAAGACAGATCTTGTGCGGATGCGTGATGAATTTTGGGATACTGCACCTCATTATGGTGGCAGAAAAGGTAATATTGTAATGTCAATTTTTTTGGTCTTACACGATATTTCTGGTTTGTGTTATTTATTATGAACTAATCATTGAACTTCATATCATATTTTATGTACAAGGTAACTGAAACTAGAATTACTAAAAGAAGTTCTTCATGCTCATTCAAATATATTATTCAGAAAGATGATTACATTGGTTTTATGCTACTGTATTGTCAAGATCATTATCTGTAAAGAATTCCTAGCCTAGTTAGTCACGATTCGTGACTCAAGAGAAGTAATCCTCTATAGTTAGCATCATGGCATCGTGAAGGATTTGGAATTTTATTAGAAAGGAAGATGATTTTGTATTTTGGATCTTTAGAGTTGATCTCTGTTTAAGACTGTGCTATTGAGTATTTCCCATCACCCTCATTTGTTAGAACATTTGTTAGACAGGCTGATCAAGGCTATCAGGAAATGCTTACTAGTTAGGAGTATTAGTTGGTCAGTTCTTTAAATTAAAGGTTCACTACATATCTCCTAATTTTGAACTGCAAATAGATAATGCACATCAAGTTTTAAACCTCTAGTTAAATTACTATATGTTCAGCAGAATGAACATCTTCAATGGAGGTTCTTTTTTGTAACCATGTCACAGATAGGACGTTCTTTTGTGATCTATTTCATCAATCAACGAAATGGTTTATATTTCCTATGAAAAAAATGATAATATGTATTGAAGCAAGTGGGAGAAATTATCAACAACACCCGAGGCTTTAAATTCAGTTTTAAATTTTGTTTCATGCATTTTGCAAATGAAGCTACACCTCTTCAATTGGTCATTACTGAAGTTAAAATATTAAAATGAAGGTTTCCCTTTCACTAGCCTATGGCATGTACATTACACAAGGCCTTTTCATAATCACTAATATTAGTTGGTTCTGAACAATGACTCAAGTTTGTGGAGTAACATATGGATTATTGGTCCTAAGATCTTTTTTTTTCCTTGAAAGAATTTGTCAGTTCAAATTAAATGTTGAATGAATTTGAAAGAATTTAGTTGGCTATTGTACATGCGTTCTATTGGAATCTTTGGGGCGAATGTAACAGCCGTCTTTTCAAGGATTCCTCCTCTACTTTTGATTGTTTTATGGATTTAGTTTTTACTAATGCTTTTTTTTTATGTAAATCTGAGCTTCTTTTACTTATTATAGTTTATCTTTTTCTTCTGTCCAATTGGAGAGATTTCTTGTACTCACCTTTAAGTATTGGGTTTTCCCTATTTCATTCATCCAATGAAATGTTTCTTTATCAAAAAATAACAATAATAATAATAAAAATAAAAAGATGCTCTACGAATTAAAGACATGCTGGGGTTCGAATGGTTCATATCTTTGAACATGAAAGTAGAATAAAGTTTTTGTTTGTTGTTCATATTCACTAGAAGATAAGACAAACAAATTATTATCCTCATTCCTTATATCTTGATTGTGCTCTGTAGTGTTCTTATTAATCCTGAAACCATTAAAAATAATCTTATTTTGTGGGTATTAGAGATCTGGGATGCACTTCGAGCTGCTGCAGAAGCTGATCTGACGCTAGCACAAGCAATTGTGGATAGTGCAGGGGTCATTGTACAAACTGCTGATTTAACCATTTGTTATGATGAAAGAGGTATTTAGACTCAACCCCACTTCTTTTATTAATCCAAAAAAACACCCCCACAACTCTTAAGAATATCTACACTCTACCCTACATATATAATTCTTGGATCTAGGATCTATTGCTTGGTTTCTGTGGTACTGGGAAACTCGTAATATTATTATATCTTATTCTGTTTGTGAAACTTGAAATATTATTATAACTTTTTCTGTTAGAATGAATGTTATTATTATGACCTATCTGAGCATAATTTAGTAGATAAGACATTAATTACTATCTCAAAAGTAGATGATTTCACCGTCCACTCTGTAATTGTTGAATTAAAAAAAAAAAAAAAAGGTCACGAGTATGAGTATGACATTAGTTGGTTCGATCCCCCACCCCTTTTGTGTATATTATCGTTATCGATTGGTTTAAATTTCCTGTTGTTTTTAACCTCTCACACAACTCAATTGCAGGTGCGAAATACGAATTGCCTAAGTATGTTTTGAGTGAGCCAACCAACTTGATTTGA

mRNA sequence

ATGGGTTGTGCCGGATCGTCGCAGGCCAAAGGCGACGGGCCTGTGAAAAAAATTAGGAAGCCTAAACCTTGGAAGCATCCCCAACCAATAACAAAGACAGATCTTGTGCGGATGCGTGATGAATTTTGGGATACTGCACCTCATTATGGTGGCAGAAAAGAGATCTGGGATGCACTTCGAGCTGCTGCAGAAGCTGATCTGACGCTAGCACAAGCAATTGTGGATAGTGCAGGGGTCATTGTACAAACTGCTGATTTAACCATTTGTTATGATGAAAGAGGTGCGAAATACGAATTGCCTAAGTATGTTTTGAGTGAGCCAACCAACTTGATTTGA

Coding sequence (CDS)

ATGGGTTGTGCCGGATCGTCGCAGGCCAAAGGCGACGGGCCTGTGAAAAAAATTAGGAAGCCTAAACCTTGGAAGCATCCCCAACCAATAACAAAGACAGATCTTGTGCGGATGCGTGATGAATTTTGGGATACTGCACCTCATTATGGTGGCAGAAAAGAGATCTGGGATGCACTTCGAGCTGCTGCAGAAGCTGATCTGACGCTAGCACAAGCAATTGTGGATAGTGCAGGGGTCATTGTACAAACTGCTGATTTAACCATTTGTTATGATGAAAGAGGTGCGAAATACGAATTGCCTAAGTATGTTTTGAGTGAGCCAACCAACTTGATTTGA

Protein sequence

MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI

Homology

[Close]

BLAST of HG10013716 vs. NCBI nr
Match: XP_038898666.1 (ubiquitin domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 227.3 bits (578), Expect = 6.7e-56
Identity = 108/111 (97.30%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQAKG+GPVKKIRKPKPWKHPQPI+KTDLVRMRDEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQAKGNGPVKKIRKPKPWKHPQPISKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQ+ADLTICYDERGAKYELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLI 111

[Close]

BLAST of HG10013716 vs. NCBI nr
Match: XP_008463752.1 (PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 224.6 bits (571), Expect = 4.4e-55
Identity = 107/111 (96.40%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQAKGDG VKKIRKPKPWK+PQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAG+IVQ+ADLTICYDERGAKYELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLI 111

[Close]

BLAST of HG10013716 vs. NCBI nr
Match: XP_022144511.1 (ubiquitin domain-containing protein 1-like [Momordica charantia])

HSP 1 Score: 224.6 bits (571), Expect = 4.4e-55
Identity = 107/111 (96.40%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQAKGDGPVKKIRKPK WKHPQPITKT+LV+MRDEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQ+ADLTICYDERGAKYELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLI 111

[Close]

BLAST of HG10013716 vs. NCBI nr
Match: XP_004146021.1 (ubiquitin domain-containing protein 1 [Cucumis sativus] >KGN55055.1 hypothetical protein Csa_012079 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 5.7e-55
Identity = 106/111 (95.50%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQAKGDG VKKIRKPKPWK+PQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAG+IVQ+ADLTICYDERGAKYELPKYVLSEPTNL+
Sbjct: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 111

[Close]

BLAST of HG10013716 vs. NCBI nr
Match: XP_022941497.1 (ubiquitin domain-containing protein 1-like [Cucurbita moschata] >XP_022981235.1 ubiquitin domain-containing protein 1-like [Cucurbita maxima] >XP_023525955.1 ubiquitin domain-containing protein 1-like [Cucurbita pepo subsp. pepo] >KAG6607920.1 Ubiquitin domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037447.1 Ubiquitin domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma] >KAG6607927.1 Ubiquitin domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 222.6 bits (566), Expect = 1.7e-54
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 1   MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQAKGDGPVKKIRKPK WKHPQPITKTDL RMRDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQ+ADLTICYDERGA+YELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 111

[Close]

BLAST of HG10013716 vs. ExPASy Swiss-Prot
Match: Q4V8W7 (Ubiquitin domain-containing protein 1 OS=Danio rerio OX=7955 GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 7.8e-23
Identity = 59/115 (51.30%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 2   GCAGSSQAKGDGPVKKIRKPKP-WKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 61
           G    +Q K  G  + ++K KP WK   P+T+  L   RDEFWDTAP + GRKEIWDAL+
Sbjct: 14  GRGSRTQRKRGGRNEPLKKDKPKWKSDYPMTEGQLRSKRDEFWDTAPAFEGRKEIWDALK 73

Query: 62  AAAEA----DLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           AAA A    D  LAQAIVD A + +    LT CYDE G +Y+LP Y L+ P NLI
Sbjct: 74  AAAVALECSDHELAQAIVDGANITLPHGSLTECYDELGNRYQLPVYCLAPPVNLI 128

[Close]

BLAST of HG10013716 vs. ExPASy Swiss-Prot
Match: Q6GL38 (Ubiquitin domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-22
Identity = 58/113 (51.33%), Postives = 70/113 (61.95%), Query Frame = 0


Query: 4   AGSSQAKGDGPVKKIRKPKP-WKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALRAA 63
           A   Q K  G  + ++K +P WK   P+T   L   RDEFWDTAP + GRKEIWDAL+AA
Sbjct: 19  ASGQQRKRAGRNEPLKKERPRWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAA 78

Query: 64  AEA----DLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           A A    D  LAQAIVD A + +    LT CYDE G +Y+LP Y L+ P NLI
Sbjct: 79  AFAVEANDHELAQAIVDGASITLPHGSLTECYDELGTRYQLPVYCLAPPVNLI 131

[Close]

BLAST of HG10013716 vs. ExPASy Swiss-Prot
Match: Q6DG43 (Ubiquitin domain-containing protein 2 OS=Danio rerio OX=7955 GN=ubtd2 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-22
Identity = 58/111 (52.25%), Postives = 69/111 (62.16%), Query Frame = 0


Query: 5   GSSQAKGDGPVKKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALRAAAE 64
           G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + GRKEIWDAL+AAA+
Sbjct: 21  GTGVALGRNQPLKREKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAQ 80

Query: 65  A----DLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           A    D  LAQAI+D A + +    LT CYDE G +Y+LP Y LS P N+I
Sbjct: 81  AFESNDHELAQAIIDGASITLPHGALTECYDELGNRYQLPVYCLSPPVNMI 130

[Close]

BLAST of HG10013716 vs. ExPASy Swiss-Prot
Match: Q5EAE3 (Ubiquitin domain-containing protein 2 OS=Bos taurus OX=9913 GN=UBTD2 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21
Identity = 57/111 (51.35%), Postives = 68/111 (61.26%), Query Frame = 0


Query: 5   GSSQAKGDGPVKKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALRAAAE 64
           G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + GRKEIWDAL+AAA 
Sbjct: 21  GTGVALGRNQPLKKEKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAH 80

Query: 65  A----DLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           A    D  LAQAI+D A + +    LT CYDE G +Y+LP Y L+ P N+I
Sbjct: 81  AFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMI 130

[Close]

BLAST of HG10013716 vs. ExPASy Swiss-Prot
Match: Q8WUN7 (Ubiquitin domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBTD2 PE=1 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21
Identity = 57/111 (51.35%), Postives = 68/111 (61.26%), Query Frame = 0


Query: 5   GSSQAKGDGPVKKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALRAAAE 64
           G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + GRKEIWDAL+AAA 
Sbjct: 21  GTGVALGRNQPLKKEKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAH 80

Query: 65  A----DLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           A    D  LAQAI+D A + +    LT CYDE G +Y+LP Y L+ P N+I
Sbjct: 81  AFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMI 130

[Close]

BLAST of HG10013716 vs. ExPASy TrEMBL
Match: A0A6J1CTM1 (ubiquitin domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC111014152 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.1e-55
Identity = 107/111 (96.40%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQAKGDGPVKKIRKPK WKHPQPITKT+LV+MRDEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQ+ADLTICYDERGAKYELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLI 111

[Close]

BLAST of HG10013716 vs. ExPASy TrEMBL
Match: A0A1S3CJZ5 (ubiquitin domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501821 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.1e-55
Identity = 107/111 (96.40%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQAKGDG VKKIRKPKPWK+PQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAG+IVQ+ADLTICYDERGAKYELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLI 111

[Close]

BLAST of HG10013716 vs. ExPASy TrEMBL
Match: A0A0A0KZH7 (UBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G626080 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.8e-55
Identity = 106/111 (95.50%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQAKGDG VKKIRKPKPWK+PQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAG+IVQ+ADLTICYDERGAKYELPKYVLSEPTNL+
Sbjct: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 111

[Close]

BLAST of HG10013716 vs. ExPASy TrEMBL
Match: A0A6J1IYX4 (ubiquitin domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111480432 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 8.0e-55
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 1   MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQAKGDGPVKKIRKPK WKHPQPITKTDL RMRDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQ+ADLTICYDERGA+YELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 111

[Close]

BLAST of HG10013716 vs. ExPASy TrEMBL
Match: A0A6J1FML0 (ubiquitin domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446780 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 8.0e-55
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 1   MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQAKGDGPVKKIRKPK WKHPQPITKTDL RMRDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQ+ADLTICYDERGA+YELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 111

[Close]

BLAST of HG10013716 vs. TAIR 10
Match: AT1G53400.1 (Ubiquitin domain-containing protein )

HSP 1 Score: 203.8 bits (517), Expect = 7.4e-53
Identity = 93/110 (84.55%), Postives = 104/110 (94.55%), Query Frame = 0


Query: 1   MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGS+Q++ DG VKKIRKPKPWKH QPITK +L+++R+EFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSTQSQADGSVKKIRKPKPWKHTQPITKAELMKLREEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNL 111
           AAAEAD++LAQAIVDSAGVIVQ  DLT+CYDERGAKYELPKYVLSEPTNL
Sbjct: 61  AAAEADISLAQAIVDSAGVIVQNTDLTVCYDERGAKYELPKYVLSEPTNL 110

[Close]

BLAST of HG10013716 vs. TAIR 10
Match: AT5G45740.1 (Ubiquitin domain-containing protein )

HSP 1 Score: 177.9 bits (450), Expect = 4.3e-45
Identity = 83/113 (73.45%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 1   MGCAGSSQAKGDGPV--KKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDA 60
           MGC GSSQA+ +G    KKI KPKPW H +PIT+  L  MR+EFWDT+PHYGG++EIW+A
Sbjct: 1   MGCIGSSQARNEGGAKRKKIMKPKPWAHTEPITRAQLTNMREEFWDTSPHYGGQREIWEA 60

Query: 61  LRAAAEADLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           LRAAAEADL LAQ IVDSAGVIVQ  DLT+C+DERGA+YELP+YVLSEPTNLI
Sbjct: 61  LRAAAEADLKLAQTIVDSAGVIVQNRDLTLCWDERGARYELPRYVLSEPTNLI 113

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BLAST of HG10013716 vs. TAIR 10
Match: AT1G16960.1 (Ubiquitin domain-containing protein )

HSP 1 Score: 168.3 bits (425), Expect = 3.4e-42
Identity = 79/112 (70.54%), Postives = 97/112 (86.61%), Query Frame = 0


Query: 1   MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGC+ SS+   +G  +KIR+PK WKHPQPI++ +L +MR+EFWDTAPHYGG+KEIWDALR
Sbjct: 1   MGCS-SSRTIAEGKKEKIRRPKTWKHPQPISRDELTQMREEFWDTAPHYGGKKEIWDALR 60

Query: 61  AAAEA-DLTLAQAIVDSAGVIVQTADLTICYDERGAKYELPKYVLSEPTNLI 112
           AAAE  DL+LAQ I++SAGVIVQ  DLTICYDE+G+KYELPKYVL +P+NLI
Sbjct: 61  AAAEEDDLSLAQTILESAGVIVQNTDLTICYDEKGSKYELPKYVLRDPSNLI 111

The following BLAST results are available for this feature:

BLAST of HG10013716 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898666.1	6.7e-56	97.30	ubiquitin domain-containing protein 1-like [Benincasa hispida]	[more]
XP_008463752.1	4.4e-55	96.40	PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis melo]	[more]
XP_022144511.1	4.4e-55	96.40	ubiquitin domain-containing protein 1-like [Momordica charantia]	[more]
XP_004146021.1	5.7e-55	95.50	ubiquitin domain-containing protein 1 [Cucumis sativus] >KGN55055.1 hypothetical...	[more]
XP_022941497.1	1.7e-54	95.50	ubiquitin domain-containing protein 1-like [Cucurbita moschata] >XP_022981235.1 ...	[more]

BLAST of HG10013716 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4V8W7	7.8e-23	51.30	Ubiquitin domain-containing protein 1 OS=Danio rerio OX=7955 GN=ubtd1 PE=2 SV=1	[more]
Q6GL38	1.7e-22	51.33	Ubiquitin domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=ubtd1 PE=...	[more]
Q6DG43	2.3e-22	52.25	Ubiquitin domain-containing protein 2 OS=Danio rerio OX=7955 GN=ubtd2 PE=2 SV=1	[more]
Q5EAE3	1.1e-21	51.35	Ubiquitin domain-containing protein 2 OS=Bos taurus OX=9913 GN=UBTD2 PE=2 SV=1	[more]
Q8WUN7	1.1e-21	51.35	Ubiquitin domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBTD2 PE=1 SV=2	[more]

BLAST of HG10013716 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTM1	2.1e-55	96.40	ubiquitin domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A1S3CJZ5	2.1e-55	96.40	ubiquitin domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC1035018...	[more]
A0A0A0KZH7	2.8e-55	95.50	UBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G626080 PE=4 SV...	[more]
A0A6J1IYX4	8.0e-55	95.50	ubiquitin domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1FML0	8.0e-55	95.50	ubiquitin domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of HG10013716 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53400.1	7.4e-53	84.55	Ubiquitin domain-containing protein	[more]
AT5G45740.1	4.3e-45	73.45	Ubiquitin domain-containing protein	[more]
AT1G16960.1	3.4e-42	70.54	Ubiquitin domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032752	DC-UbP/UBTD2, N-terminal domain	PFAM	PF16455	UBD	coord: 16..111 e-value: 4.6E-35 score: 119.9
IPR038169	DC-UbP/UBTD2, N-terminal domain superfamily	GENE3D	1.20.225.20		coord: 31..104 e-value: 4.2E-28 score: 99.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR13609:SF25	BINDING PROTEIN, PUTATIVE-RELATED	coord: 1..110
IPR039869	Ubiquitin domain-containing protein 1/2	PANTHER	PTHR13609	UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED	coord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013716.1	HG10013716.1	mRNA