HG10013706 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013706
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	rab3 GTPase-activating protein non-catalytic subunit
Location	Chr02: 3992560 .. 3996798 (-)
RNA-Seq Expression	HG10013706
Synteny	HG10013706

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGACGAACCTTCACGACGGAGTTAGGCTGCATAGCTTGCGAGGAGCTTGCCGATTTTGGCGCTGGAAAGGAAGGCTGGCTCGTCGACAACCCCAATCTTCTATGCGCCCTCGATTCCCACTCTCTGGCGCTGGCCAATCGATCCATCATTCTTGTTCTTGGTTGGACCGGTTCCGATGGATATCAGGTGAAGATCAGGCCTTCTGATTTGTCTCCGATCGAAGCGGAGTACATCTCCGCTTTAGAATGGTTGGTGTTCGATGAAATTAAGGTGATTTTGGTCGGGACTTCTTGTGGGTATTTGCTGATTTACTCCTTGATGTGGGATTTGATTCTCAAACAGGTAGTCGGCCACTCTTGTCCTTTTAAATTGTCTTTGATATGTTCATTTCATCATCAGAAAAGCTTAAAGGGGGAATTGAAAATTAAGAAACTTTCGCGGGATTACTATTCTCAAATCTATGACCAAAATCAAAATCAAAAGTTGTCAAATTAGAAGAAGAGTATTAACTTAAGATGTATAATTATGAACCTTTCTTGTTGGTGGCTCCTTTTTGTGGGTTTCTGCCCGTGCATTCTTTCATTTCCCTCTCAATGGAAGTAAGGTTTTCTCATAAAAAAAAAAAGATGTATAATTATGGAGGAAGTACTTGTAGGTTTTGTATGATCTTTCACCTGGGAAGATGCTGTTGGAATGGTAGATGCATTTATTTAGTTGAACACTGTATTGGTAATTTAAAATCCAGATGCTTCTATGATTGTTGGCGTTCATTTGGATATCTTCAAGACCTCACAAAATTTGCAATTGCCTAATATTATTTGAGGAGTATATTTGAATTCATGTATCTTTGGGAAAGAGTAAAAGGAGGAGACAACATCTCAGCTAAGTATGCTTCAAGTTAAACCGTAGGTTAGTTACATGTGATACACAAGATGATTTTCTACTGGAAATGCGTGGGAGTAAGATGTATACAATTGTCATCCCTCCTGCAGGGAAAATATGAAATGAAAAACATTTGGTTTCTTGATTTAGAATTTTATTCATTTTGACTGAAGTGTCCGTTGGTAGTATAAGTCCATCCTGGCAGAATTCTAAAGATTATGGTCCATGGTCCGAGGAGAGAGTTATCCCATGGATCTTCTTTCGAGGAGGTTTCAGTTGCTATGCCAGGTGTAATTGCTCGAATTGAAGGATCTGATATTCAGGTTCTTGCTACCACTCTTTAATTACTAAATCTTGAAACTACGCATAGGTTTTGATTATTGTGCTGATTTTTCTTGGAATTTATTGATTGCGCTGTTGAGATAGTCTCCATATTCCTAATTTTTCCTTTCTCTTGAGAACTCTGATGTTAGTCTCTACATCCACATATGTTCTTTACTATGACCTCTGTGCTTCAACTTAAAGAAATATGGCCTTCTGCCTTTATGGATGATTTGTTTTGGACCACTATAACATGGCCTACATGCTTTGGTCACAGAATAAATTGCAAAAATGGTTTCAAGAATCAAATGCACGGTTTTGGGATCCAGAATCAGACCGGCAAGATATGGAGGATTCTGAAAATTCTTTTGAAAAGTTAGTTTATCAAGTATGGAACGTCAGCAAATACGGTTCCTGTGCAGATGCAGCAATCACCGGTGTTATGCCTCCTCCATTGATGGAACTTCAGGTAAAAGGTGGTTTCTTTATTTCATTAGAAAAACTTGGAGATTGTTCTAGGAGCGTGCTTATGTCATGGAAGCTCTCTGAATTTATTCTGGTATTTGAATTCAGCTGCTTTTATTGTTGGGCAGTCAAGTGAACGTTATTTTTGTGCAGTCACTGTTGGAGAGGATGCTGTTATTTCAGCATTCAGGTCAGGTTGCTGGTCTTTTGCTATTTATGATTCTCAAGTTATTGTGAATAATGGAATTAATTTTCATCCATGTGATAAAAATATTATAGTTGAATCTTGTCAATTATTGTGACATTTTGTTTACTTTGTATGGTGGCATCATGTAAAAAGACTTTCTGAAGACAAGAGCAGGTCTTTAGTTGGAGCCATTTTATCAAAAGTTGTCCCTGCAACATTTTCAACAATAGCTTCATTTTCAAAAATGATTTGGCGAAGTGAACCAAAAACATCTAAAAAGACGGATGTGAAGGGTCAAGCTTTTGCTCGAGGTGCGAATAATTGGTTGCAATATTTAATCAATTATTGTTTTCCTAAGATTCTATGTTTTGTTTCGCTGGACCTCCTATCTAATTCTTTTTGTCAAGCAAGCTTGACGTGCAAAGATATCAAGTTCTGTATTGGTCATTGTGAACAGATGGGCAGCTTTAACTATCTAAGAAGTTAAATACTATGGCCATCATACATTGTTGATTCAAAGTTCTATTACTGTGCAGTTTTTGTTATTGTTAATAACTTCTGCTCATTAGGGCTGTCTTTTTCTTTCTTTTTCTTTATAAGTCCTATGATTAGTATCGTGGGGGCTTAAATAGAGAAATTTGATGTATACTTTTCATTTTCCGTTTAGCATGTGTTTAGGAGTGATTTTAAAATCGTTAAAATCACAAAAAAACACACTTTAACCACTCAAAATTAAGTTAATTTTCAATTTTACACTTTTAAATGTAATTTTCAATCATCAAATTTAGTTTTGAAGTATTAAAAATATATTTCACGGTGATTTTGAAAATGACAAAATTGATTTGAGTCATTTTAAAATCACTCTCAAACATTCCCTTAGTTATATGATAAAGATGCAAGTTTCATTTGATATTGATATATCTAGATCTTGAGTTCATGCCACTGTTAGTTACATGTTGCTCGAGTGTTCTAACAACTACGCATCAGCTATTGTACTATTTTTACAAAATTTTTAGGAACTTCTTGGCATCATGATTGCTGCAGCCTCTCCTTTGACGTGCTTGAAGGACCATCCAAGAAAGGGTGAGAAACTGACTTTGTCTCCAAGCGGTACATTGGCAGCTATTACAGATTCACTGGGTCGAATACTGCTTCTGGACACGCAGGCACTTGTGGTGGTGCGACTATGGAAGGTCATCTTTTAAACTTTGATGATTTAAAATAAATTCTCTTCCATCATTTGATCCCTCTTTCTCCTAAACAAACTCTTTAAAACAAAATACAGGGATATCGTGATGCCAACTGTTTGTTCATGGAGATGCTAGTTAATAGAGATGCTGCATCATCAAGTTCTAATTCCATAGATTATGAACCAGCAAAACATGATTACTGCTTGTGTTTGGCTATTCATGCACCAAAAAAGGGGATAGTTGAGGTACTCTTTTCCACTCATAAATTGAGTTTACTCTTTACATTTGTTCAAAAAAAAAAAAAAATTATCATCTCATCTTTTGAACATTCTTGACTGTCAACTTCTGCTCGGTCTCCCCCTTGTCAGAAACCAGACTTTTACAAGAAAGTTAATATGATTTGCACCATTAGAAGATAAAACACAACCATCTAATAGAACTCAAATATATTGAAAGTTAAATAACCAGACTATAAGATAAACCAAGTGTTCGATGTACATGGACTCTCCCTCTCTTGAGATCTCTCTCAAGTCCTAAATCACTAACCAAAATAATGCTTACCCCCTCCTTTCTCACTCACTGTATTTATAACAAACCTTTCCTAACAAACTCCTTAGCTAATTACTAACATACCCCTGATACGTACTAATACTATTTCTATACCAATGGCATTTTTATCAACTTCTTATTTGTTAATGGATATTATTAACTTGGTTACTCTTTGCTAATAGTAGATGAAAACAACAAATGTAAGGAGCCTATCCACTATGAAGCTTTCCTAGGAAGACCTCTTGAGGATAAAAAATGATAATCCTTTTGTTATAATTCTGCATTGAATGCAAGCAAAAGAGCAGAAGTTTCTGGAATCATGGATATATATATTAGTTTGTCCTATAAATGACATTTTTCTTTGGAATCTTCTTAAATGTTCTGGCACATTCTGGTTCTATTTAAGCACAGGCTTCTTCTTAGTGACTGAAAAGTGAAAATGATTTCTGTGATCTGTGGCAGATATGGCAGATGAGAACGGGGCGTCGCCTCCGAACCATTCAATGTACAAAAGGTAGCAAACTACTGCAACCTTCCTCCAGGTTTGGAGCGTCCATGGCTTCCCCTTATGTTCCATTGGAAGTTTTCTTAGTAAACGGAGATTCTGGTCAGATTTCTGTTATAAACCGAACCCTTTGA

mRNA sequence

ATGGCGAGACGAACCTTCACGACGGAGTTAGGCTGCATAGCTTGCGAGGAGCTTGCCGATTTTGGCGCTGGAAAGGAAGGCTGGCTCGTCGACAACCCCAATCTTCTATGCGCCCTCGATTCCCACTCTCTGGCGCTGGCCAATCGATCCATCATTCTTGTTCTTGGTTGGACCGGTTCCGATGGATATCAGGTGAAGATCAGGCCTTCTGATTTGTCTCCGATCGAAGCGGAGTACATCTCCGCTTTAGAATGGTTGGTGTTCGATGAAATTAAGGTGATTTTGGTCGGGACTTCTTGTGGAATTCTAAAGATTATGGTCCATGGTCCGAGGAGAGAGTTATCCCATGGATCTTCTTTCGAGGAGGTTTCAGTTGCTATGCCAGGTGTAATTGCTCGAATTGAAGGATCTGATATTCAGAATAAATTGCAAAAATGGTTTCAAGAATCAAATGCACGGTTTTGGGATCCAGAATCAGACCGGCAAGATATGGAGGATTCTGAAAATTCTTTTGAAAAGTTAGTTTATCAAGTATGGAACGTCAGCAAATACGGTTCCTGTGCAGATGCAGCAATCACCGGTGTTATGCCTCCTCCATTGATGGAACTTCAGGAACTTCTTGGCATCATGATTGCTGCAGCCTCTCCTTTGACGTGCTTGAAGGACCATCCAAGAAAGGGTGAGAAACTGACTTTGTCTCCAAGCGGTACATTGGCAGCTATTACAGATTCACTGGGTCGAATACTGCTTCTGGACACGCAGGCACTTGTGGTGGTGCGACTATGGAAGGGATATCGTGATGCCAACTGTTTGTTCATGGAGATGCTAGTTAATAGAGATGCTGCATCATCAAGTTCTAATTCCATAGATTATGAACCAGCAAAACATGATTACTGCTTGTGTTTGGCTATTCATGCACCAAAAAAGGGGATAGTTGAGATATGGCAGATGAGAACGGGGCGTCGCCTCCGAACCATTCAATGTACAAAAGGTAGCAAACTACTGCAACCTTCCTCCAGGTTTGGAGCGTCCATGGCTTCCCCTTATGTTCCATTGGAAGTTTTCTTAGTAAACGGAGATTCTGGTCAGATTTCTGTTATAAACCGAACCCTTTGA

Coding sequence (CDS)

ATGGCGAGACGAACCTTCACGACGGAGTTAGGCTGCATAGCTTGCGAGGAGCTTGCCGATTTTGGCGCTGGAAAGGAAGGCTGGCTCGTCGACAACCCCAATCTTCTATGCGCCCTCGATTCCCACTCTCTGGCGCTGGCCAATCGATCCATCATTCTTGTTCTTGGTTGGACCGGTTCCGATGGATATCAGGTGAAGATCAGGCCTTCTGATTTGTCTCCGATCGAAGCGGAGTACATCTCCGCTTTAGAATGGTTGGTGTTCGATGAAATTAAGGTGATTTTGGTCGGGACTTCTTGTGGAATTCTAAAGATTATGGTCCATGGTCCGAGGAGAGAGTTATCCCATGGATCTTCTTTCGAGGAGGTTTCAGTTGCTATGCCAGGTGTAATTGCTCGAATTGAAGGATCTGATATTCAGAATAAATTGCAAAAATGGTTTCAAGAATCAAATGCACGGTTTTGGGATCCAGAATCAGACCGGCAAGATATGGAGGATTCTGAAAATTCTTTTGAAAAGTTAGTTTATCAAGTATGGAACGTCAGCAAATACGGTTCCTGTGCAGATGCAGCAATCACCGGTGTTATGCCTCCTCCATTGATGGAACTTCAGGAACTTCTTGGCATCATGATTGCTGCAGCCTCTCCTTTGACGTGCTTGAAGGACCATCCAAGAAAGGGTGAGAAACTGACTTTGTCTCCAAGCGGTACATTGGCAGCTATTACAGATTCACTGGGTCGAATACTGCTTCTGGACACGCAGGCACTTGTGGTGGTGCGACTATGGAAGGGATATCGTGATGCCAACTGTTTGTTCATGGAGATGCTAGTTAATAGAGATGCTGCATCATCAAGTTCTAATTCCATAGATTATGAACCAGCAAAACATGATTACTGCTTGTGTTTGGCTATTCATGCACCAAAAAAGGGGATAGTTGAGATATGGCAGATGAGAACGGGGCGTCGCCTCCGAACCATTCAATGTACAAAAGGTAGCAAACTACTGCAACCTTCCTCCAGGTTTGGAGCGTCCATGGCTTCCCCTTATGTTCCATTGGAAGTTTTCTTAGTAAACGGAGATTCTGGTCAGATTTCTGTTATAAACCGAACCCTTTGA

Protein sequence

MARRTFTTELGCIACEELADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWTGSDGYQVKIRPSDLSPIEAEYISALEWLVFDEIKVILVGTSCGILKIMVHGPRRELSHGSSFEEVSVAMPGVIARIEGSDIQNKLQKWFQESNARFWDPESDRQDMEDSENSFEKLVYQVWNVSKYGSCADAAITGVMPPPLMELQELLGIMIAAASPLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEMLVNRDAASSSSNSIDYEPAKHDYCLCLAIHAPKKGIVEIWQMRTGRRLRTIQCTKGSKLLQPSSRFGASMASPYVPLEVFLVNGDSGQISVINRTL

Homology

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BLAST of HG10013706 vs. NCBI nr
Match: XP_038898701.1 (rab3 GTPase-activating protein non-catalytic subunit [Benincasa hispida])

HSP 1 Score: 662.1 bits (1707), Expect = 2.7e-186
Identity = 342/456 (75.00%), Postives = 358/456 (78.51%), Query Frame = 0


Query: 1   MARRTFTTELGCIACEELADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWTGS 60
           MARRTFTTELGCIACEELADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGW GS
Sbjct: 1   MARRTFTTELGCIACEELADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWAGS 60

Query: 61  DGYQVKIRPSDLSPIEAEYISALEWLVFDEIKVILVGTSCG------------------- 120
           DGYQ KIRPSDLSPIEAEYISALEWLVFDEIKV+LVGTSCG                   
Sbjct: 61  DGYQAKIRPSDLSPIEAEYISALEWLVFDEIKVLLVGTSCGYLLIYSLSGDLILKQMIHP 120

Query: 121 --ILKIMVHGPRRELSHGSSFEEVSVAMPGVIARIEGSDIQNKLQKWFQESNARFWDPES 180
             I+KI VHG +R+LSHGSSFEEVS+AMPGVIARIEGSD+QN LQKWFQESNARFWDP+S
Sbjct: 121 GRIIKIRVHGSKRDLSHGSSFEEVSIAMPGVIARIEGSDMQNTLQKWFQESNARFWDPKS 180

Query: 181 DRQDMEDSENSFEKLVYQVWNVSKYGSCADAAITGVMPPPLMELQ--------------- 240
           DR DMEDSENSFEKL YQVWNVSKYG+CADAAITGVMPPPLMELQ               
Sbjct: 181 DRWDMEDSENSFEKLAYQVWNVSKYGACADAAITGVMPPPLMELQSSERYFCAVTVGEDA 240

Query: 241 -------------------------------------------------ELLGIMIAAAS 300
                                                            ++ G   A AS
Sbjct: 241 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKLIWRSEPKTSKKPDVKGQAFARAS 300

Query: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360
           PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM
Sbjct: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360

Query: 361 LVNRDAASSSSNSIDYEPAKHDYCLCLAIHAPKKGIVEIWQMRTGRRLRTIQCTKGSKLL 372
           LVNRD ASSSSNSIDYEP+K+DYCLCLAIHAP+KGIVEIWQMRTGRRLRTI+CTKGSKLL
Sbjct: 361 LVNRDTASSSSNSIDYEPSKNDYCLCLAIHAPRKGIVEIWQMRTGRRLRTIRCTKGSKLL 420

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BLAST of HG10013706 vs. NCBI nr
Match: XP_008463738.1 (PREDICTED: rab3 GTPase-activating protein non-catalytic subunit isoform X1 [Cucumis melo] >KAA0066767.1 rab3 GTPase-activating protein non-catalytic subunit isoform X1 [Cucumis melo var. makuwa] >TYK27914.1 rab3 GTPase-activating protein non-catalytic subunit isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 648.7 bits (1672), Expect = 3.1e-182
Identity = 337/456 (73.90%), Postives = 357/456 (78.29%), Query Frame = 0


Query: 1   MARRTFTTELGCIACEELADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWTGS 60
           MARRTFTTELGCIACE+LADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGW+GS
Sbjct: 1   MARRTFTTELGCIACEDLADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWSGS 60

Query: 61  DGYQVKIRPSDLSPIEAEYISALEWLVFDEIKVILVGTSCG------------------- 120
           DGY++KIRPSDLSPIEAEYISALEWLV DEIKVILVGTSCG                   
Sbjct: 61  DGYRLKIRPSDLSPIEAEYISALEWLVLDEIKVILVGTSCGYFLIYSLSGDLILKQMIHP 120

Query: 121 --ILKIMVHGPRRELSHGSSFEEVSVAMPGVIARIEGSDIQNKLQKWFQESNARFWDPES 180
             ILKI VHG +R+LSHGSS EEVSVAMPGVIARIEGSDIQN LQKWFQESNARFWDP+S
Sbjct: 121 GRILKIRVHGSKRDLSHGSSLEEVSVAMPGVIARIEGSDIQNTLQKWFQESNARFWDPKS 180

Query: 181 DRQDMEDSENSFEKLVYQVWNVSKYGSCADAAITGVMPPPLMELQ--------------- 240
            +QDM DSENS EKL YQVWNVSKYG+CADAAITGVMPPPLMELQ               
Sbjct: 181 QQQDMNDSENSVEKLAYQVWNVSKYGACADAAITGVMPPPLMELQSSERYFCAVTVGEDA 240

Query: 241 -------------ELLGIMI------------------------------------AAAS 300
                         L+G ++                                    A AS
Sbjct: 241 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKMIWRSEPKTSKKPDAKGQAFARAS 300

Query: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360
           PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM
Sbjct: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360

Query: 361 LVNRDAASSSSNSIDYEPAKHDYCLCLAIHAPKKGIVEIWQMRTGRRLRTIQCTKGSKLL 372
           LVNRD ASSSSNS+DYEPAK+DYCLCLAIHAP+KGIVEIWQMRTGRRLRTI+C+KGSKLL
Sbjct: 361 LVNRDTASSSSNSMDYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGRRLRTIRCSKGSKLL 420

[Close]

BLAST of HG10013706 vs. NCBI nr
Match: XP_022982109.1 (uncharacterized protein LOC111481046 isoform X3 [Cucurbita maxima])

HSP 1 Score: 638.3 bits (1645), Expect = 4.2e-179
Identity = 321/395 (81.27%), Postives = 342/395 (86.58%), Query Frame = 0


Query: 1   MARRTFTTELGCIACEELADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWTGS 60
           MARRT+TTELGCIACEEL DFGAG EGWLVDNPNLLCALDSHSLALANRS+ILVLGW GS
Sbjct: 1   MARRTYTTELGCIACEELDDFGAGNEGWLVDNPNLLCALDSHSLALANRSVILVLGWVGS 60

Query: 61  DGYQVKIRPSDLSPIEAEYISALEWLVFDEIKVILVGTSCG------------------- 120
           DGYQVKI+PSDLSPIEAEYISALEWLV DEIKVIL GTSCG                   
Sbjct: 61  DGYQVKIKPSDLSPIEAEYISALEWLVLDEIKVILAGTSCGYLLIYSLSGDLILKQMIHP 120

Query: 121 --ILKIMVHGPRRELSHGSSFEEVSVAMPGVIARIEGSDIQNKLQKWFQESNARFWDPES 180
             ILKI V G +R+LS+GSS+EEVS+ MPGVIARIEGSDIQN L+KWFQESNAR WDP+S
Sbjct: 121 ARILKIRVRGLKRDLSYGSSYEEVSIVMPGVIARIEGSDIQNTLRKWFQESNARIWDPKS 180

Query: 181 DRQDMEDSENSFEKLVYQVWNVSKYGSCADAAITGVMPPPLMELQELLGIMIA---AASP 240
             +DMEDS NSFE L YQVWNVSKY +CADAAITGVMPPPLMELQ L G M+    +AS 
Sbjct: 181 SSRDMEDSGNSFETLAYQVWNVSKYSACADAAITGVMPPPLMELQSLSGRMLLFRHSASL 240

Query: 241 LTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEML 300
           LTCLKDHPRKGEKLTLSPSGTLA ITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEML
Sbjct: 241 LTCLKDHPRKGEKLTLSPSGTLAVITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEML 300

Query: 301 VNRDAASSSSNSIDYEPAKHDYCLCLAIHAPKKGIVEIWQMRTGRRLRTIQCTKGSKLLQ 360
           VNRD ASSS  SIDYEP K+DYCLCLAIHAPKKGI EIWQMRTGRRLRTI+C KGSKLLQ
Sbjct: 301 VNRDTASSS--SIDYEPEKNDYCLCLAIHAPKKGIAEIWQMRTGRRLRTIRCAKGSKLLQ 360

Query: 361 PSSRFGASMASPYVPLEVFLVNGDSGQISVINRTL 372
           PSSRFG+SMASPYVPLEVFL+NGDSG+IS++NRTL
Sbjct: 361 PSSRFGSSMASPYVPLEVFLLNGDSGEISILNRTL 393

[Close]

BLAST of HG10013706 vs. NCBI nr
Match: XP_004146026.1 (rab3 GTPase-activating protein non-catalytic subunit [Cucumis sativus])

HSP 1 Score: 634.0 bits (1634), Expect = 8.0e-178
Identity = 330/456 (72.37%), Postives = 353/456 (77.41%), Query Frame = 0


Query: 1   MARRTFTTELGCIACEELADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWTGS 60
           MARRTFTTELGCIACE+LADFGAGKEGWLVD+PNLLCALDSHSLALANRSIILVLGW+GS
Sbjct: 1   MARRTFTTELGCIACEDLADFGAGKEGWLVDSPNLLCALDSHSLALANRSIILVLGWSGS 60

Query: 61  DGYQVKIRPSDLSPIEAEYISALEWLVFDEIKVILVGTSCG------------------- 120
           DGY +KIRPSDLSPIEAEYISALEWLV DEIKVILVGTSCG                   
Sbjct: 61  DGYPLKIRPSDLSPIEAEYISALEWLVLDEIKVILVGTSCGYFLIYSLRGDLILKQMIHP 120

Query: 121 --ILKIMVHGPRRELSHGSSFEEVSVAMPGVIARIEGSDIQNKLQKWFQESNARFWDPES 180
             ILKI VHG +R+LSHGSS EEVS+AMPGVIARIEGSDIQN LQKWFQES+++FWDP+S
Sbjct: 121 GRILKIRVHGSKRDLSHGSSLEEVSIAMPGVIARIEGSDIQNTLQKWFQESSSQFWDPKS 180

Query: 181 DRQDMEDSENSFEKLVYQVWNVSKYGSCADAAITGVMPPPLMELQ--------------- 240
            ++DM DSENS EKL YQVWNVSKYG+CADAAITGVMPPPLMELQ               
Sbjct: 181 HQRDMNDSENSVEKLAYQVWNVSKYGACADAAITGVMPPPLMELQSSERYFCAVTVGEDA 240

Query: 241 -------------ELLGIMI------------------------------------AAAS 300
                         L+G ++                                    A AS
Sbjct: 241 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKMIWRSEPKTSKKPDAKGQAFARAS 300

Query: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360
           PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM
Sbjct: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360

Query: 361 LVNRDAASSSSNSIDYEPAKHDYCLCLAIHAPKKGIVEIWQMRTGRRLRTIQCTKGSKLL 372
           LVNRD ASSSSNS+DYEPAK+DYCLCLAIHAP+KGIVEIWQMRTGRRLRTI+CTKGSKLL
Sbjct: 361 LVNRDTASSSSNSMDYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGRRLRTIRCTKGSKLL 420

[Close]

BLAST of HG10013706 vs. NCBI nr
Match: XP_022982108.1 (rab3 GTPase-activating protein non-catalytic subunit-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 628.2 bits (1619), Expect = 4.4e-176
Identity = 321/410 (78.29%), Postives = 342/410 (83.41%), Query Frame = 0


Query: 1   MARRTFTTELGCIACEELADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWTGS 60
           MARRT+TTELGCIACEEL DFGAG EGWLVDNPNLLCALDSHSLALANRS+ILVLGW GS
Sbjct: 1   MARRTYTTELGCIACEELDDFGAGNEGWLVDNPNLLCALDSHSLALANRSVILVLGWVGS 60

Query: 61  DGYQVKIRPSDLSPIEAEYISALEWLVFDEIKVILVGTSCG------------------- 120
           DGYQVKI+PSDLSPIEAEYISALEWLV DEIKVIL GTSCG                   
Sbjct: 61  DGYQVKIKPSDLSPIEAEYISALEWLVLDEIKVILAGTSCGYLLIYSLSGDLILKQMIHP 120

Query: 121 --ILKIMVHGPRRELSHGSSFEEVSVAMPGVIARIEGSDIQNKLQKWFQESNARFWDPES 180
             ILKI V G +R+LS+GSS+EEVS+ MPGVIARIEGSDIQN L+KWFQESNAR WDP+S
Sbjct: 121 ARILKIRVRGLKRDLSYGSSYEEVSIVMPGVIARIEGSDIQNTLRKWFQESNARIWDPKS 180

Query: 181 DRQDMEDSENSFEKLVYQVWNVSKYGSCADAAITGVMPPPLMEL---------------Q 240
             +DMEDS NSFE L YQVWNVSKY +CADAAITGVMPPPLMEL               Q
Sbjct: 181 SSRDMEDSGNSFETLAYQVWNVSKYSACADAAITGVMPPPLMELQLFLLLGSQVNVIFVQ 240

Query: 241 ELLGIMIA---AASPLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRL 300
            L G M+    +AS LTCLKDHPRKGEKLTLSPSGTLA ITDSLGRILLLDTQALVVVRL
Sbjct: 241 SLSGRMLLFRHSASLLTCLKDHPRKGEKLTLSPSGTLAVITDSLGRILLLDTQALVVVRL 300

Query: 301 WKGYRDANCLFMEMLVNRDAASSSSNSIDYEPAKHDYCLCLAIHAPKKGIVEIWQMRTGR 360
           WKGYRDANCLFMEMLVNRD ASSS  SIDYEP K+DYCLCLAIHAPKKGI EIWQMRTGR
Sbjct: 301 WKGYRDANCLFMEMLVNRDTASSS--SIDYEPEKNDYCLCLAIHAPKKGIAEIWQMRTGR 360

Query: 361 RLRTIQCTKGSKLLQPSSRFGASMASPYVPLEVFLVNGDSGQISVINRTL 372
           RLRTI+C KGSKLLQPSSRFG+SMASPYVPLEVFL+NGDSG+IS++NRTL
Sbjct: 361 RLRTIRCAKGSKLLQPSSRFGSSMASPYVPLEVFLLNGDSGEISILNRTL 408

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BLAST of HG10013706 vs. ExPASy Swiss-Prot
Match: Q9H2M9 (Rab3 GTPase-activating protein non-catalytic subunit OS=Homo sapiens OX=9606 GN=RAB3GAP2 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.4e-15
Identity = 53/171 (30.99%), Postives = 83/171 (48.54%), Query Frame = 0


Query: 211 IAAASPLTC---LKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRD 270
           +  A+PL     L D  R GE + LSP  TLAA+TD  GR++LLD    + +R+WKGYRD
Sbjct: 368 VEPATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRD 427

Query: 271 ANCLFMEMLVNRDAASSSSNSIDYEPAKHD-----YCLCLAIHAPKKGIVEIWQMRTGRR 330
           A   +++ +   D         D+ P  +          L I+AP++GI+E+W  + G R
Sbjct: 428 AQIGWIQTV--EDLHERVPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 487

Query: 331 LRTIQCTKGSKLLQPSSRF-----GASMASPYVPLEVFLVNGDSGQISVIN 369
           +      K  +LL P  +        S +      ++ LV+  SG +  +N
Sbjct: 488 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536

[Close]

BLAST of HG10013706 vs. ExPASy Swiss-Prot
Match: Q5U1Z0 (Rab3 GTPase-activating protein non-catalytic subunit OS=Rattus norvegicus OX=10116 GN=Rab3gap2 PE=1 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-14
Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = 0


Query: 214 ASPLTC---LKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANC 273
           A+PL     L D  R GE + LSP  TLAA+TD  GR++LLD    + +R+WKGYRDA  
Sbjct: 369 ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQI 428

Query: 274 LFMEMLVNRDAASSSSNSIDYEP-----AKHDYCLCLAIHAPKKGIVEIWQMRTGRRLRT 333
            +++++   D         D+ P             L I+AP++GI+E+W  + G R+  
Sbjct: 429 GWIQIV--EDLHERVPEKGDFSPFGNTQGPSRVAQFLVIYAPRRGILEVWSTQQGPRVGA 488

Query: 334 IQCTKGSKLLQP 338
               K  +LL P
Sbjct: 489 FNVGKHCRLLYP 498

[Close]

BLAST of HG10013706 vs. ExPASy Swiss-Prot
Match: Q8BMG7 (Rab3 GTPase-activating protein non-catalytic subunit OS=Mus musculus OX=10090 GN=Rab3gap2 PE=1 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 2.6e-14
Identity = 47/130 (36.15%), Postives = 65/130 (50.00%), Query Frame = 0


Query: 214 ASPLTC---LKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDAN- 273
           A+PL     L D  R GE + LSP  TLAA+TD  GR++LLD    + +R+WKGYRDA  
Sbjct: 369 ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQV 428

Query: 274 --CLFMEMLVNRDAASSSSNSIDYEPAKHDYCLCLAIHAPKKGIVEIWQMRTGRRLRTIQ 333
                +E L  R       +              L I+AP++GI+E+W  + G R+    
Sbjct: 429 GWIQIVEDLHERVPEKGGFSPFGNTQGPSRVAQFLVIYAPRRGILEVWNTQQGPRVGAFN 488

Query: 334 CTKGSKLLQP 338
             K  +LL P
Sbjct: 489 VGKHCRLLYP 498

[Close]

BLAST of HG10013706 vs. ExPASy Swiss-Prot
Match: Q9VKB9 (Rab3 GTPase-activating protein regulatory subunit OS=Drosophila melanogaster OX=7227 GN=Rab3-GAP PE=1 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 7.6e-14
Identity = 40/116 (34.48%), Postives = 65/116 (56.03%), Query Frame = 0


Query: 220 LKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEMLVNR 279
           L D  R G  L+++P G LA +TD+L R++L+DT   +++R+WKGYRDA C F+ +    
Sbjct: 324 LYDGKRDGLTLSVAPGGRLAVVTDNLDRVMLVDTHQAIILRVWKGYRDAQCAFVPV---- 383

Query: 280 DAASSSSNSIDYEPAKHDYCLCLAIHAPKKGIVEIWQMRTGRRLRTIQCTKGSKLL 336
                S   I     K    L L I+AP+ G ++IW ++ G ++     +K  +L+
Sbjct: 384 --KEKSVRGIKTHKRK---ALFLVIYAPRMGCLDIWALQNGPKVAAFNVSKSGQLM 430

[Close]

BLAST of HG10013706 vs. ExPASy TrEMBL
Match: A0A5A7VI11 (Rab3 GTPase-activating protein non-catalytic subunit isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00990 PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.5e-182
Identity = 337/456 (73.90%), Postives = 357/456 (78.29%), Query Frame = 0


Query: 1   MARRTFTTELGCIACEELADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWTGS 60
           MARRTFTTELGCIACE+LADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGW+GS
Sbjct: 1   MARRTFTTELGCIACEDLADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWSGS 60

Query: 61  DGYQVKIRPSDLSPIEAEYISALEWLVFDEIKVILVGTSCG------------------- 120
           DGY++KIRPSDLSPIEAEYISALEWLV DEIKVILVGTSCG                   
Sbjct: 61  DGYRLKIRPSDLSPIEAEYISALEWLVLDEIKVILVGTSCGYFLIYSLSGDLILKQMIHP 120

Query: 121 --ILKIMVHGPRRELSHGSSFEEVSVAMPGVIARIEGSDIQNKLQKWFQESNARFWDPES 180
             ILKI VHG +R+LSHGSS EEVSVAMPGVIARIEGSDIQN LQKWFQESNARFWDP+S
Sbjct: 121 GRILKIRVHGSKRDLSHGSSLEEVSVAMPGVIARIEGSDIQNTLQKWFQESNARFWDPKS 180

Query: 181 DRQDMEDSENSFEKLVYQVWNVSKYGSCADAAITGVMPPPLMELQ--------------- 240
            +QDM DSENS EKL YQVWNVSKYG+CADAAITGVMPPPLMELQ               
Sbjct: 181 QQQDMNDSENSVEKLAYQVWNVSKYGACADAAITGVMPPPLMELQSSERYFCAVTVGEDA 240

Query: 241 -------------ELLGIMI------------------------------------AAAS 300
                         L+G ++                                    A AS
Sbjct: 241 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKMIWRSEPKTSKKPDAKGQAFARAS 300

Query: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360
           PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM
Sbjct: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360

Query: 361 LVNRDAASSSSNSIDYEPAKHDYCLCLAIHAPKKGIVEIWQMRTGRRLRTIQCTKGSKLL 372
           LVNRD ASSSSNS+DYEPAK+DYCLCLAIHAP+KGIVEIWQMRTGRRLRTI+C+KGSKLL
Sbjct: 361 LVNRDTASSSSNSMDYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGRRLRTIRCSKGSKLL 420

[Close]

BLAST of HG10013706 vs. ExPASy TrEMBL
Match: A0A1S3CJY7 (rab3 GTPase-activating protein non-catalytic subunit isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501813 PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.5e-182
Identity = 337/456 (73.90%), Postives = 357/456 (78.29%), Query Frame = 0


Query: 1   MARRTFTTELGCIACEELADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWTGS 60
           MARRTFTTELGCIACE+LADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGW+GS
Sbjct: 1   MARRTFTTELGCIACEDLADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWSGS 60

Query: 61  DGYQVKIRPSDLSPIEAEYISALEWLVFDEIKVILVGTSCG------------------- 120
           DGY++KIRPSDLSPIEAEYISALEWLV DEIKVILVGTSCG                   
Sbjct: 61  DGYRLKIRPSDLSPIEAEYISALEWLVLDEIKVILVGTSCGYFLIYSLSGDLILKQMIHP 120

Query: 121 --ILKIMVHGPRRELSHGSSFEEVSVAMPGVIARIEGSDIQNKLQKWFQESNARFWDPES 180
             ILKI VHG +R+LSHGSS EEVSVAMPGVIARIEGSDIQN LQKWFQESNARFWDP+S
Sbjct: 121 GRILKIRVHGSKRDLSHGSSLEEVSVAMPGVIARIEGSDIQNTLQKWFQESNARFWDPKS 180

Query: 181 DRQDMEDSENSFEKLVYQVWNVSKYGSCADAAITGVMPPPLMELQ--------------- 240
            +QDM DSENS EKL YQVWNVSKYG+CADAAITGVMPPPLMELQ               
Sbjct: 181 QQQDMNDSENSVEKLAYQVWNVSKYGACADAAITGVMPPPLMELQSSERYFCAVTVGEDA 240

Query: 241 -------------ELLGIMI------------------------------------AAAS 300
                         L+G ++                                    A AS
Sbjct: 241 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKMIWRSEPKTSKKPDAKGQAFARAS 300

Query: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360
           PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM
Sbjct: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360

Query: 361 LVNRDAASSSSNSIDYEPAKHDYCLCLAIHAPKKGIVEIWQMRTGRRLRTIQCTKGSKLL 372
           LVNRD ASSSSNS+DYEPAK+DYCLCLAIHAP+KGIVEIWQMRTGRRLRTI+C+KGSKLL
Sbjct: 361 LVNRDTASSSSNSMDYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGRRLRTIRCSKGSKLL 420

[Close]

BLAST of HG10013706 vs. ExPASy TrEMBL
Match: A0A6J1J3N8 (uncharacterized protein LOC111481046 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111481046 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 2.0e-179
Identity = 321/395 (81.27%), Postives = 342/395 (86.58%), Query Frame = 0


Query: 1   MARRTFTTELGCIACEELADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWTGS 60
           MARRT+TTELGCIACEEL DFGAG EGWLVDNPNLLCALDSHSLALANRS+ILVLGW GS
Sbjct: 1   MARRTYTTELGCIACEELDDFGAGNEGWLVDNPNLLCALDSHSLALANRSVILVLGWVGS 60

Query: 61  DGYQVKIRPSDLSPIEAEYISALEWLVFDEIKVILVGTSCG------------------- 120
           DGYQVKI+PSDLSPIEAEYISALEWLV DEIKVIL GTSCG                   
Sbjct: 61  DGYQVKIKPSDLSPIEAEYISALEWLVLDEIKVILAGTSCGYLLIYSLSGDLILKQMIHP 120

Query: 121 --ILKIMVHGPRRELSHGSSFEEVSVAMPGVIARIEGSDIQNKLQKWFQESNARFWDPES 180
             ILKI V G +R+LS+GSS+EEVS+ MPGVIARIEGSDIQN L+KWFQESNAR WDP+S
Sbjct: 121 ARILKIRVRGLKRDLSYGSSYEEVSIVMPGVIARIEGSDIQNTLRKWFQESNARIWDPKS 180

Query: 181 DRQDMEDSENSFEKLVYQVWNVSKYGSCADAAITGVMPPPLMELQELLGIMIA---AASP 240
             +DMEDS NSFE L YQVWNVSKY +CADAAITGVMPPPLMELQ L G M+    +AS 
Sbjct: 181 SSRDMEDSGNSFETLAYQVWNVSKYSACADAAITGVMPPPLMELQSLSGRMLLFRHSASL 240

Query: 241 LTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEML 300
           LTCLKDHPRKGEKLTLSPSGTLA ITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEML
Sbjct: 241 LTCLKDHPRKGEKLTLSPSGTLAVITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEML 300

Query: 301 VNRDAASSSSNSIDYEPAKHDYCLCLAIHAPKKGIVEIWQMRTGRRLRTIQCTKGSKLLQ 360
           VNRD ASSS  SIDYEP K+DYCLCLAIHAPKKGI EIWQMRTGRRLRTI+C KGSKLLQ
Sbjct: 301 VNRDTASSS--SIDYEPEKNDYCLCLAIHAPKKGIAEIWQMRTGRRLRTIRCAKGSKLLQ 360

Query: 361 PSSRFGASMASPYVPLEVFLVNGDSGQISVINRTL 372
           PSSRFG+SMASPYVPLEVFL+NGDSG+IS++NRTL
Sbjct: 361 PSSRFGSSMASPYVPLEVFLLNGDSGEISILNRTL 393

[Close]

BLAST of HG10013706 vs. ExPASy TrEMBL
Match: A0A0A0L025 (RAB3GAP2_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G627180 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 3.9e-178
Identity = 330/456 (72.37%), Postives = 353/456 (77.41%), Query Frame = 0


Query: 1   MARRTFTTELGCIACEELADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWTGS 60
           MARRTFTTELGCIACE+LADFGAGKEGWLVD+PNLLCALDSHSLALANRSIILVLGW+GS
Sbjct: 1   MARRTFTTELGCIACEDLADFGAGKEGWLVDSPNLLCALDSHSLALANRSIILVLGWSGS 60

Query: 61  DGYQVKIRPSDLSPIEAEYISALEWLVFDEIKVILVGTSCG------------------- 120
           DGY +KIRPSDLSPIEAEYISALEWLV DEIKVILVGTSCG                   
Sbjct: 61  DGYPLKIRPSDLSPIEAEYISALEWLVLDEIKVILVGTSCGYFLIYSLRGDLILKQMIHP 120

Query: 121 --ILKIMVHGPRRELSHGSSFEEVSVAMPGVIARIEGSDIQNKLQKWFQESNARFWDPES 180
             ILKI VHG +R+LSHGSS EEVS+AMPGVIARIEGSDIQN LQKWFQES+++FWDP+S
Sbjct: 121 GRILKIRVHGSKRDLSHGSSLEEVSIAMPGVIARIEGSDIQNTLQKWFQESSSQFWDPKS 180

Query: 181 DRQDMEDSENSFEKLVYQVWNVSKYGSCADAAITGVMPPPLMELQ--------------- 240
            ++DM DSENS EKL YQVWNVSKYG+CADAAITGVMPPPLMELQ               
Sbjct: 181 HQRDMNDSENSVEKLAYQVWNVSKYGACADAAITGVMPPPLMELQSSERYFCAVTVGEDA 240

Query: 241 -------------ELLGIMI------------------------------------AAAS 300
                         L+G ++                                    A AS
Sbjct: 241 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKMIWRSEPKTSKKPDAKGQAFARAS 300

Query: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360
           PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM
Sbjct: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360

Query: 361 LVNRDAASSSSNSIDYEPAKHDYCLCLAIHAPKKGIVEIWQMRTGRRLRTIQCTKGSKLL 372
           LVNRD ASSSSNS+DYEPAK+DYCLCLAIHAP+KGIVEIWQMRTGRRLRTI+CTKGSKLL
Sbjct: 361 LVNRDTASSSSNSMDYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGRRLRTIRCTKGSKLL 420

[Close]

BLAST of HG10013706 vs. ExPASy TrEMBL
Match: A0A6J1J405 (rab3 GTPase-activating protein non-catalytic subunit-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481046 PE=4 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 2.1e-176
Identity = 321/410 (78.29%), Postives = 342/410 (83.41%), Query Frame = 0


Query: 1   MARRTFTTELGCIACEELADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWTGS 60
           MARRT+TTELGCIACEEL DFGAG EGWLVDNPNLLCALDSHSLALANRS+ILVLGW GS
Sbjct: 1   MARRTYTTELGCIACEELDDFGAGNEGWLVDNPNLLCALDSHSLALANRSVILVLGWVGS 60

Query: 61  DGYQVKIRPSDLSPIEAEYISALEWLVFDEIKVILVGTSCG------------------- 120
           DGYQVKI+PSDLSPIEAEYISALEWLV DEIKVIL GTSCG                   
Sbjct: 61  DGYQVKIKPSDLSPIEAEYISALEWLVLDEIKVILAGTSCGYLLIYSLSGDLILKQMIHP 120

Query: 121 --ILKIMVHGPRRELSHGSSFEEVSVAMPGVIARIEGSDIQNKLQKWFQESNARFWDPES 180
             ILKI V G +R+LS+GSS+EEVS+ MPGVIARIEGSDIQN L+KWFQESNAR WDP+S
Sbjct: 121 ARILKIRVRGLKRDLSYGSSYEEVSIVMPGVIARIEGSDIQNTLRKWFQESNARIWDPKS 180

Query: 181 DRQDMEDSENSFEKLVYQVWNVSKYGSCADAAITGVMPPPLMEL---------------Q 240
             +DMEDS NSFE L YQVWNVSKY +CADAAITGVMPPPLMEL               Q
Sbjct: 181 SSRDMEDSGNSFETLAYQVWNVSKYSACADAAITGVMPPPLMELQLFLLLGSQVNVIFVQ 240

Query: 241 ELLGIMIA---AASPLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRL 300
            L G M+    +AS LTCLKDHPRKGEKLTLSPSGTLA ITDSLGRILLLDTQALVVVRL
Sbjct: 241 SLSGRMLLFRHSASLLTCLKDHPRKGEKLTLSPSGTLAVITDSLGRILLLDTQALVVVRL 300

Query: 301 WKGYRDANCLFMEMLVNRDAASSSSNSIDYEPAKHDYCLCLAIHAPKKGIVEIWQMRTGR 360
           WKGYRDANCLFMEMLVNRD ASSS  SIDYEP K+DYCLCLAIHAPKKGI EIWQMRTGR
Sbjct: 301 WKGYRDANCLFMEMLVNRDTASSS--SIDYEPEKNDYCLCLAIHAPKKGIAEIWQMRTGR 360

Query: 361 RLRTIQCTKGSKLLQPSSRFGASMASPYVPLEVFLVNGDSGQISVINRTL 372
           RLRTI+C KGSKLLQPSSRFG+SMASPYVPLEVFL+NGDSG+IS++NRTL
Sbjct: 361 RLRTIRCAKGSKLLQPSSRFGSSMASPYVPLEVFLLNGDSGEISILNRTL 408

[Close]

BLAST of HG10013706 vs. TAIR 10
Match: AT3G14910.1 (unknown protein; Has 158 Blast hits to 158 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). )

HSP 1 Score: 477.6 bits (1228), Expect = 8.9e-135
Identity = 250/458 (54.59%), Postives = 308/458 (67.25%), Query Frame = 0


Query: 1   MARRTFTTELGCIACEELADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWTGS 60
           MA+R   TELGCIACEEL + GAGKEGWLV+NPNLL ALDSHSLALANR +IL++ W   
Sbjct: 1   MAKRIHLTELGCIACEELTELGAGKEGWLVNNPNLLSALDSHSLALANRFLILIVNWGDP 60

Query: 61  DGYQVKIRPSDLSPIEAEYISALEWLVFDEIKVILVGTSCG------------------- 120
           D  +VKIRP DLSPIEAE I+A+EWLVFD+++V++ GTSCG                   
Sbjct: 61  DAPRVKIRP-DLSPIEAESITAIEWLVFDDVRVVVAGTSCGYLLVYSVTGDLIHKQIVHQ 120

Query: 121 --ILKIMVHGPRRELSHGSSFEEVSVAMPGVIARIEGSDIQNKLQKWFQESNARFWDPES 180
             ILKI V G +++L   +S EE+ + +PGVIAR +GS+IQ+ +QKW QE N+ FWD ++
Sbjct: 121 SRILKIRVRGTKKDLMQETSSEEICIVLPGVIARFDGSNIQSMVQKWVQEKNSNFWDQKN 180

Query: 181 DRQDMEDSENSFEKLVYQVWNVSKYGSCADAAITGVMPPPLMELQ--------------- 240
            + D ED+ + +++L YQ+WNV+K G C DA +TGVMPPPL+ELQ               
Sbjct: 181 RKGDAEDTGSLYQRLPYQIWNVNKNGVCVDATVTGVMPPPLLELQSSQRYYCAVTIGEDS 240

Query: 241 -------------ELLGIMI-------------------------------------AAA 300
                         L+G ++                                     A A
Sbjct: 241 VISAYRLSEDRGRSLVGAILSKVVPAAASTIASFSKLIWRSNDQSPKRKPEAKTQSFARA 300

Query: 301 SPLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFME 360
           S LTC+KD+PRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDA+C+FME
Sbjct: 301 SSLTCIKDYPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFME 360

Query: 361 MLVNRDAASSSSNSIDYEPAKHDYCLCLAIHAPKKGIVEIWQMRTGRRLRTIQCTKGSKL 372
           ML  +D   S    I  EP K DYCLCLAIHAP+KGI+E+WQMRTG RL TIQC KGSKL
Sbjct: 361 MLAKKDKGKS---VIHTEPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKL 420

The following BLAST results are available for this feature:

BLAST of HG10013706 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898701.1	2.7e-186	75.00	rab3 GTPase-activating protein non-catalytic subunit [Benincasa hispida]	[more]
XP_008463738.1	3.1e-182	73.90	PREDICTED: rab3 GTPase-activating protein non-catalytic subunit isoform X1 [Cucu...	[more]
XP_022982109.1	4.2e-179	81.27	uncharacterized protein LOC111481046 isoform X3 [Cucurbita maxima]	[more]
XP_004146026.1	8.0e-178	72.37	rab3 GTPase-activating protein non-catalytic subunit [Cucumis sativus]	[more]
XP_022982108.1	4.4e-176	78.29	rab3 GTPase-activating protein non-catalytic subunit-like isoform X2 [Cucurbita ...	[more]

BLAST of HG10013706 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9H2M9	1.4e-15	30.99	Rab3 GTPase-activating protein non-catalytic subunit OS=Homo sapiens OX=9606 GN=...	[more]
Q5U1Z0	1.2e-14	35.61	Rab3 GTPase-activating protein non-catalytic subunit OS=Rattus norvegicus OX=101...	[more]
Q8BMG7	2.6e-14	36.15	Rab3 GTPase-activating protein non-catalytic subunit OS=Mus musculus OX=10090 GN...	[more]
Q9VKB9	7.6e-14	34.48	Rab3 GTPase-activating protein regulatory subunit OS=Drosophila melanogaster OX=...	[more]

BLAST of HG10013706 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VI11	1.5e-182	73.90	Rab3 GTPase-activating protein non-catalytic subunit isoform X1 OS=Cucumis melo ...	[more]
A0A1S3CJY7	1.5e-182	73.90	rab3 GTPase-activating protein non-catalytic subunit isoform X1 OS=Cucumis melo ...	[more]
A0A6J1J3N8	2.0e-179	81.27	uncharacterized protein LOC111481046 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0L025	3.9e-178	72.37	RAB3GAP2_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G627180 ...	[more]
A0A6J1J405	2.1e-176	78.29	rab3 GTPase-activating protein non-catalytic subunit-like isoform X2 OS=Cucurbit...	[more]

BLAST of HG10013706 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14910.1	8.9e-135	54.59	unknown protein; Has 158 Blast hits to 158 proteins in 77 species: Archae - 0; B...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032839	Rab3-GAP regulatory subunit, N-terminal	PFAM	PF14655	RAB3GAP2_N	coord: 103..203 e-value: 1.6E-14 score: 54.0 coord: 213..335 e-value: 2.5E-50 score: 171.9
IPR026059	Rab3-GAP regulatory subunit	PANTHER	PTHR12472	RAB3-GAP REGULATORY DOMAIN	coord: 1..204 coord: 213..367
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 215..331

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013706.1	HG10013706.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043087	regulation of GTPase activity
molecular_function	GO:0005515	protein binding