HG10013627 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013627
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ethylene-responsive transcription factor ERF003-like
Location	Chr02: 3154632 .. 3155256 (+)
RNA-Seq Expression	HG10013627
Synteny	HG10013627

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAGACCGCAAAAGCGCTACCGTGGTGTAAGACAGAGGCATTGGGGCTCTTGGGTTTCTGAAATTCGTCATCCTTTATTGTGGGTCTCTTGCATTTTCTCAATCTTCTTCAATAACTTTTCTTTAAACTCATAATCGACTCTGTTTTTACAGGAAAACAAGAATTTGGTTGGGAACATTTGAAACGGCGGAGGATGCTGCGAGAGCTTACGATGAAGCTGCAAGATTAATGTGTGGACCAAAAGCAAGAACGAATTTCCCATACAATCCAAATGCAATTCAATCCTCGAATTTCAGGATTTTGTCGGCTAATTTGACTGCAAAATTGCATCGGTGTTATATGGCTTCTTTGCAGATTAGTAACCAAGCTTCAAGGGAGTTTAAAAGAGACATTCCGGCGCCGGCGCCGCTGCCTTATGCGGTTGTTAGCACCGGTGTGGCGAATTCAGCGGTGGAGGAGATTAGACCGGCGGCGGAGGAAGGGTCGTGTACGGCGGATTGGATGGTGGGAAGTGTGAAAATGGAAAATGAATTTGGGGAGCTTAAATTGTTGGAAGATGATCACATTGAGCAAATGATTGAGGAGCTTCTTTATTATGGATCCATGGAGTTTTGTTTGTGA

mRNA sequence

ATGGCCAGACCGCAAAAGCGCTACCGTGGTGTAAGACAGAGGCATTGGGGCTCTTGGGTTTCTGAAATTCGTCATCCTTTATTGAAAACAAGAATTTGGTTGGGAACATTTGAAACGGCGGAGGATGCTGCGAGAGCTTACGATGAAGCTGCAAGATTAATGTGTGGACCAAAAGCAAGAACGAATTTCCCATACAATCCAAATGCAATTCAATCCTCGAATTTCAGGATTTTGTCGGCTAATTTGACTGCAAAATTGCATCGGTGTTATATGGCTTCTTTGCAGATTAGTAACCAAGCTTCAAGGGAGTTTAAAAGAGACATTCCGGCGCCGGCGCCGCTGCCTTATGCGGTTGTTAGCACCGGTGTGGCGAATTCAGCGGTGGAGGAGATTAGACCGGCGGCGGAGGAAGGGTCGTGTACGGCGGATTGGATGGTGGGAAGTGTGAAAATGGAAAATGAATTTGGGGAGCTTAAATTGTTGGAAGATGATCACATTGAGCAAATGATTGAGGAGCTTCTTTATTATGGATCCATGGAGTTTTGTTTGTGA

Coding sequence (CDS)

ATGGCCAGACCGCAAAAGCGCTACCGTGGTGTAAGACAGAGGCATTGGGGCTCTTGGGTTTCTGAAATTCGTCATCCTTTATTGAAAACAAGAATTTGGTTGGGAACATTTGAAACGGCGGAGGATGCTGCGAGAGCTTACGATGAAGCTGCAAGATTAATGTGTGGACCAAAAGCAAGAACGAATTTCCCATACAATCCAAATGCAATTCAATCCTCGAATTTCAGGATTTTGTCGGCTAATTTGACTGCAAAATTGCATCGGTGTTATATGGCTTCTTTGCAGATTAGTAACCAAGCTTCAAGGGAGTTTAAAAGAGACATTCCGGCGCCGGCGCCGCTGCCTTATGCGGTTGTTAGCACCGGTGTGGCGAATTCAGCGGTGGAGGAGATTAGACCGGCGGCGGAGGAAGGGTCGTGTACGGCGGATTGGATGGTGGGAAGTGTGAAAATGGAAAATGAATTTGGGGAGCTTAAATTGTTGGAAGATGATCACATTGAGCAAATGATTGAGGAGCTTCTTTATTATGGATCCATGGAGTTTTGTTTGTGA

Protein sequence

MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPNAIQSSNFRILSANLTAKLHRCYMASLQISNQASREFKRDIPAPAPLPYAVVSTGVANSAVEEIRPAAEEGSCTADWMVGSVKMENEFGELKLLEDDHIEQMIEELLYYGSMEFCL

Homology

[Close]

BLAST of HG10013627 vs. NCBI nr
Match: XP_038899563.1 (ethylene-responsive transcription factor ERF003-like [Benincasa hispida])

HSP 1 Score: 314.7 bits (805), Expect = 5.3e-82
Identity = 155/183 (84.70%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 1   MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 42  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 101

Query: 61  TNFPYNPNAIQSSNFRILSANLTAKLHRCYMASLQISNQASREFKRDIPAPAPLPYAVVS 120
           TNFP+NPNAIQSS+ RILSANLTAKLHRCYMASLQISNQ S EFKRD+ AP P P  +  
Sbjct: 102 TNFPFNPNAIQSSSSRILSANLTAKLHRCYMASLQISNQVSGEFKRDVTAPFPEPAPLPC 161

Query: 121 TGVANSAVEEIRPAAEEGSCTADWMVGSVKMENEFGELKLLEDDHIEQMIEELLYYGSME 180
            GVA+S VEEI    E+G C ADWMV SVK+E+EFGELKLLEDDHIEQMIEEL YYGSME
Sbjct: 162 GGVASSVVEEIGTLVEQGPCAADWMVRSVKIESEFGELKLLEDDHIEQMIEELRYYGSME 221

Query: 181 FCL 184
           FCL
Sbjct: 222 FCL 224

[Close]

BLAST of HG10013627 vs. NCBI nr
Match: XP_008452875.1 (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo])

HSP 1 Score: 301.2 bits (770), Expect = 6.0e-78
Identity = 153/184 (83.15%), Postives = 161/184 (87.50%), Query Frame = 0


Query: 1   MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 22  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 81

Query: 61  TNFPYNPNAIQSSNFRILSANLTAKLHRCYMASLQISNQAS-REFKRDIPAPAPLPYAVV 120
           TNFPY+ +AIQSSN RILS+NLTAKLHRCYMASLQISNQ S  EFKRDI +  P P +  
Sbjct: 82  TNFPYSSSAIQSSNSRILSSNLTAKLHRCYMASLQISNQGSGEEFKRDITSAFPAPAS-- 141

Query: 121 STGVANSAVEEIRPAAEEGSCTADWMVGSVKMENEFGELKLLEDDHIEQMIEELLYYGSM 180
                +S VE+I PAAEEG C ADWMV SVKME+EFGELKLLEDDHIEQMIEEL YYGSM
Sbjct: 142 ----TSSVVEDIIPAAEEGPCAADWMVRSVKMESEFGELKLLEDDHIEQMIEELRYYGSM 199

Query: 181 EFCL 184
           EFCL
Sbjct: 202 EFCL 199

[Close]

BLAST of HG10013627 vs. NCBI nr
Match: XP_011654234.1 (ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KAE8649946.1 hypothetical protein Csa_012743 [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 7.9e-78
Identity = 151/183 (82.51%), Postives = 159/183 (86.89%), Query Frame = 0


Query: 1   MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 43  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 102

Query: 61  TNFPYNPNAIQSSNFRILSANLTAKLHRCYMASLQISNQASREFKRDIPAPAPLPYAVVS 120
           TNFPY+P+AIQSSN RILS+NLTAKLHRCYMASL+ISNQ S EFK DI A  P P +   
Sbjct: 103 TNFPYSPSAIQSSNSRILSSNLTAKLHRCYMASLEISNQGSAEFKSDITAAFPAPAS--- 162

Query: 121 TGVANSAVEEIRPAAEEGSCTADWMVGSVKMENEFGELKLLEDDHIEQMIEELLYYGSME 180
               +S VEEI PA EE  C ADWMV SVK+E+EFGELKLLEDDHIEQMIEEL YYGSME
Sbjct: 163 ---TSSVVEEIIPAVEEVPCAADWMVRSVKIESEFGELKLLEDDHIEQMIEELRYYGSME 219

Query: 181 FCL 184
           FCL
Sbjct: 223 FCL 219

[Close]

BLAST of HG10013627 vs. NCBI nr
Match: KAG7031771.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256.1 bits (653), Expect = 2.2e-64
Identity = 138/184 (75.00%), Postives = 144/184 (78.26%), Query Frame = 0


Query: 1   MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQ++YRGVRQRHWGSWVSEIRHP LKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 61  TNFPYNPNAIQSSNFRILSANLTAKLHRCYMASLQISNQASREFKRDIPAP-APLPYAVV 120
           TNFPYNPN IQSSN +ILSANLTAKLHRCYMASLQISNQ   EFKR++P P A   YA  
Sbjct: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQ---EFKRELPPPFAAASYA-- 120

Query: 121 STGVANSAVEEIRPAAEEGSCTADWMVGSVKMENEFGELKLLEDDHIEQMIEELLYYGSM 180
               A S VEE RP A E +              E  ELKLLEDDHIEQMIEELLYYGSM
Sbjct: 121 --DAARSMVEENRPTAPEAA--------------EQEELKLLEDDHIEQMIEELLYYGSM 163

Query: 181 EFCL 184
           EFCL
Sbjct: 181 EFCL 163

[Close]

BLAST of HG10013627 vs. NCBI nr
Match: KAG6608134.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254.2 bits (648), Expect = 8.5e-64
Identity = 137/184 (74.46%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 1   MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQ++YRGVRQRHWGSWVSEIRHP L TRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLSTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 61  TNFPYNPNAIQSSNFRILSANLTAKLHRCYMASLQISNQASREFKRDIPAP-APLPYAVV 120
           TNFPYNPN IQSSN +ILSANLTAKLHRCYMASLQISNQ   EFKR++P P A   YA  
Sbjct: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQ---EFKRELPPPFAAASYA-- 120

Query: 121 STGVANSAVEEIRPAAEEGSCTADWMVGSVKMENEFGELKLLEDDHIEQMIEELLYYGSM 180
               A S VEE RP A E +              E  ELKLLEDDHIEQMIEELLYYGSM
Sbjct: 121 --DAARSMVEENRPTAPEAA--------------EQEELKLLEDDHIEQMIEELLYYGSM 163

Query: 181 EFCL 184
           EFCL
Sbjct: 181 EFCL 163

[Close]

BLAST of HG10013627 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.4e-55
Identity = 112/182 (61.54%), Postives = 133/182 (73.08%), Query Frame = 0


Query: 1   MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQ+R+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNAIQSSNFRILSANLTAKLHRCYMASLQISNQASREFKRDIPAPAPLPYAVVS 120
           TNFPYNPNAI +S+ ++LSA LTAKLH+CYMASLQ++ Q   + +           +  S
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQ----TQTARSQSADS 120

Query: 121 TGVANSAVEEIRPAAEEGSCTADWMVGSVKMENEFGELKLLEDDHIEQMIEELLYYGSME 180
            GV  +     R   E  +    W  G+  M+  F   + LE+DHIEQMIEELL+YGS+E
Sbjct: 121 DGVTANESHLNRGVTE--TTEIKWEDGNANMQQNF---RPLEEDHIEQMIEELLHYGSIE 173

Query: 181 FC 183
            C
Sbjct: 181 LC 173

[Close]

BLAST of HG10013627 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 7.7e-44
Identity = 101/170 (59.41%), Postives = 118/170 (69.41%), Query Frame = 0


Query: 1   MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQ+RYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAARLMCG +AR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFPYNPNAIQSSNFRILSANLTAKLHRCYMASLQISNQAS-REFKRDIPAPAPLPYAVV 120
           TNFPYNPNA QSS+ ++LSA L AKLHRCYMASLQ++  +S  E  R I +P     AV 
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLIAKLHRCYMASLQMTRPSSLPEAPRIIASP---NNAVK 120

Query: 121 STGVANSAVEEIRPAAE-EGSCTADWMVGSVKMENEFGELKLLEDDHIEQ 169
             G     + + R   E E     D+    V+   +F   K LE+DHI Q
Sbjct: 121 GIGADAMLLPKKREQEEQETGGNLDFKKVKVECSQQF---KPLEEDHIAQ 164

[Close]

BLAST of HG10013627 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.8e-24
Identity = 59/101 (58.42%), Postives = 69/101 (68.32%), Query Frame = 0


Query: 6   KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 65
           K++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NPN-----------------AIQSSNFRILSANLTAKLHRC 90
           N N                    S++   LS+ L+AKL +C
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]

BLAST of HG10013627 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.4e-22
Identity = 80/187 (42.78%), Postives = 104/187 (55.61%), Query Frame = 0


Query: 6   KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 65
           K++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  ----NPNAIQSSNF----RILSANLTAKLHR-C-----YMASLQISNQASR---EFKRDI 125
                 N+++ ++     + LS  L AKL + C     Y+  L++ N +S      KR  
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 PAPAPLPYAVVSTGVANSAVEEIRPAAEEGSCTADWMVGSVKMENEFGELKLLEDDHIE- 175
              +P    +V  G   +A    RP         D     +K+ NE     + EDD +  
Sbjct: 125 SKTSPNWVKLVELGDKVNA----RPG-------GDIETNKMKVRNE----DVQEDDQMAM 176

[Close]

BLAST of HG10013627 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.4e-21
Identity = 46/59 (77.97%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 6  KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFP 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFP 63

[Close]

BLAST of HG10013627 vs. ExPASy TrEMBL
Match: A0A1S3BUB9 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103493770 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.9e-78
Identity = 153/184 (83.15%), Postives = 161/184 (87.50%), Query Frame = 0


Query: 1   MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 22  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 81

Query: 61  TNFPYNPNAIQSSNFRILSANLTAKLHRCYMASLQISNQAS-REFKRDIPAPAPLPYAVV 120
           TNFPY+ +AIQSSN RILS+NLTAKLHRCYMASLQISNQ S  EFKRDI +  P P +  
Sbjct: 82  TNFPYSSSAIQSSNSRILSSNLTAKLHRCYMASLQISNQGSGEEFKRDITSAFPAPAS-- 141

Query: 121 STGVANSAVEEIRPAAEEGSCTADWMVGSVKMENEFGELKLLEDDHIEQMIEELLYYGSM 180
                +S VE+I PAAEEG C ADWMV SVKME+EFGELKLLEDDHIEQMIEEL YYGSM
Sbjct: 142 ----TSSVVEDIIPAAEEGPCAADWMVRSVKMESEFGELKLLEDDHIEQMIEELRYYGSM 199

Query: 181 EFCL 184
           EFCL
Sbjct: 202 EFCL 199

[Close]

BLAST of HG10013627 vs. ExPASy TrEMBL
Match: A0A0A0L5N2 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G652640 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.8e-78
Identity = 151/183 (82.51%), Postives = 159/183 (86.89%), Query Frame = 0


Query: 1   MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 27  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 86

Query: 61  TNFPYNPNAIQSSNFRILSANLTAKLHRCYMASLQISNQASREFKRDIPAPAPLPYAVVS 120
           TNFPY+P+AIQSSN RILS+NLTAKLHRCYMASL+ISNQ S EFK DI A  P P +   
Sbjct: 87  TNFPYSPSAIQSSNSRILSSNLTAKLHRCYMASLEISNQGSAEFKSDITAAFPAPAS--- 146

Query: 121 TGVANSAVEEIRPAAEEGSCTADWMVGSVKMENEFGELKLLEDDHIEQMIEELLYYGSME 180
               +S VEEI PA EE  C ADWMV SVK+E+EFGELKLLEDDHIEQMIEEL YYGSME
Sbjct: 147 ---TSSVVEEIIPAVEEVPCAADWMVRSVKIESEFGELKLLEDDHIEQMIEELRYYGSME 203

Query: 181 FCL 184
           FCL
Sbjct: 207 FCL 203

[Close]

BLAST of HG10013627 vs. ExPASy TrEMBL
Match: A0A6J1IVF7 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111480324 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 5.3e-64
Identity = 137/184 (74.46%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 1   MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQ++YRGVRQRHWGSWVSEIRHP LKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 61  TNFPYNPNAIQSSNFRILSANLTAKLHRCYMASLQISNQASREFKRDIPAP-APLPYAVV 120
           TNFPYNPN IQSSN +ILSANLTAKLHRCYMASLQISNQ   EFKR++P P A   YA  
Sbjct: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQ---EFKRELPPPFATASYA-- 120

Query: 121 STGVANSAVEEIRPAAEEGSCTADWMVGSVKMENEFGELKLLEDDHIEQMIEELLYYGSM 180
               A S VEE RP A E +              E  E KLLEDDHIEQMIEELLYYGSM
Sbjct: 121 --DAARSMVEENRPTAAEAA--------------EQEEQKLLEDDHIEQMIEELLYYGSM 163

Query: 181 EFCL 184
           EFCL
Sbjct: 181 EFCL 163

[Close]

BLAST of HG10013627 vs. ExPASy TrEMBL
Match: A0A6J1CHC9 (ethylene-responsive transcription factor ERF003-like OS=Momordica charantia OX=3673 GN=LOC111010874 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.5e-61
Identity = 129/183 (70.49%), Postives = 142/183 (77.60%), Query Frame = 0


Query: 1   MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 52  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 111

Query: 61  TNFPYNPNAIQSSNFRILSANLTAKLHRCYMASLQISNQASREFKRD-IPAPAPLPYAVV 120
           TNF YNPN +Q    ++LSANLTAKLHRCY+ASLQI +Q  R F+R+ + APAP P  V+
Sbjct: 112 TNFAYNPNGVQCC--KLLSANLTAKLHRCYVASLQIGSQGPRGFRREHLAAPAPAPVVVM 171

Query: 121 STGVANSAVEEIRPAAEEGSCTADWMVGSVKMENEFGELKLLEDDHIEQMIEELLYYGSM 180
                     E +P    G         +VK E+E GELK+LEDDHIEQMIEELLYYGSM
Sbjct: 172 ----------EEQPPYAAGR--------NVKRESECGELKVLEDDHIEQMIEELLYYGSM 214

Query: 181 EFC 183
           EFC
Sbjct: 232 EFC 214

[Close]

BLAST of HG10013627 vs. ExPASy TrEMBL
Match: A0A498HUD1 (AP2 domain class transcription factor OS=Malus domestica OX=3750 GN=ERF10 PE=2 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.0e-59
Identity = 123/182 (67.58%), Postives = 144/182 (79.12%), Query Frame = 0


Query: 1   MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQ+RYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNAIQSSNFRILSANLTAKLHRCYMASLQISNQASREFKRDIPAPAPLPYAVVS 120
           TNFPYNPNA QSS  ++LSA LTAKLHRCYMASLQ++  + +E K+        P  +VS
Sbjct: 61  TNFPYNPNASQSSASKLLSATLTAKLHRCYMASLQMTKTSLQEPKK--------PKTLVS 120

Query: 121 TGVANSAVEEIRPAAEEGSCTADWMVGSVKMENEFGELKLLEDDHIEQMIEELLYYGSME 180
           +G      E IRP  ++G+   +W+V  VK+E+   + K LEDDHIEQMIEELL+YGS+E
Sbjct: 121 SGA--KMPEMIRPEIQQGA-EENWIVREVKVESSSQQFKPLEDDHIEQMIEELLHYGSIE 171

Query: 181 FC 183
            C
Sbjct: 181 LC 171

[Close]

BLAST of HG10013627 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 215.7 bits (548), Expect = 3.1e-56
Identity = 112/182 (61.54%), Postives = 133/182 (73.08%), Query Frame = 0


Query: 1   MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQ+R+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNAIQSSNFRILSANLTAKLHRCYMASLQISNQASREFKRDIPAPAPLPYAVVS 120
           TNFPYNPNAI +S+ ++LSA LTAKLH+CYMASLQ++ Q   + +           +  S
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQ----TQTARSQSADS 120

Query: 121 TGVANSAVEEIRPAAEEGSCTADWMVGSVKMENEFGELKLLEDDHIEQMIEELLYYGSME 180
            GV  +     R   E  +    W  G+  M+  F   + LE+DHIEQMIEELL+YGS+E
Sbjct: 121 DGVTANESHLNRGVTE--TTEIKWEDGNANMQQNF---RPLEEDHIEQMIEELLHYGSIE 173

Query: 181 FC 183
            C
Sbjct: 181 LC 173

[Close]

BLAST of HG10013627 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-25
Identity = 59/101 (58.42%), Postives = 69/101 (68.32%), Query Frame = 0


Query: 6   KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 65
           K++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NPN-----------------AIQSSNFRILSANLTAKLHRC 90
           N N                    S++   LS+ L+AKL +C
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]

BLAST of HG10013627 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 4.5e-23
Identity = 80/187 (42.78%), Postives = 104/187 (55.61%), Query Frame = 0


Query: 6   KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 65
           K++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  ----NPNAIQSSNF----RILSANLTAKLHR-C-----YMASLQISNQASR---EFKRDI 125
                 N+++ ++     + LS  L AKL + C     Y+  L++ N +S      KR  
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 PAPAPLPYAVVSTGVANSAVEEIRPAAEEGSCTADWMVGSVKMENEFGELKLLEDDHIE- 175
              +P    +V  G   +A    RP         D     +K+ NE     + EDD +  
Sbjct: 125 SKTSPNWVKLVELGDKVNA----RPG-------GDIETNKMKVRNE----DVQEDDQMAM 176

[Close]

BLAST of HG10013627 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 3.8e-22
Identity = 46/59 (77.97%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 6  KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFP 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFP 63

[Close]

BLAST of HG10013627 vs. TAIR 10
Match: AT4G13620.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 9.4e-21
Identity = 51/99 (51.52%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 4   PQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF 63
           P K YRGVRQRHWG WV+EIR P  +TR+WLGTFETAE AA AYD AA ++ G  A  NF
Sbjct: 228 PTKLYRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNF 287

Query: 64  PYNPNAIQSSNFRILSAN-LTAKLHRCYMASLQISNQAS 102
           P   + ++S + R + A+ L +K+ +  ++S Q+SN  S
Sbjct: 288 PDLKHQLKSGSLRCMIASLLESKIQQ--ISSSQVSNSPS 324

The following BLAST results are available for this feature:

BLAST of HG10013627 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899563.1	5.3e-82	84.70	ethylene-responsive transcription factor ERF003-like [Benincasa hispida]	[more]
XP_008452875.1	6.0e-78	83.15	PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo]	[more]
XP_011654234.1	7.9e-78	82.51	ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KAE8649946.1 ...	[more]
KAG7031771.1	2.2e-64	75.00	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
KAG6608134.1	8.5e-64	74.46	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of HG10013627 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AW5	4.4e-55	61.54	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	7.7e-44	59.41	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
Q9XI33	1.8e-24	58.42	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E958	6.4e-22	42.78	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	5.4e-21	77.97	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of HG10013627 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BUB9	2.9e-78	83.15	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0L5N2	3.8e-78	82.51	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G652640 PE=...	[more]
A0A6J1IVF7	5.3e-64	74.46	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1CHC9	2.5e-61	70.49	ethylene-responsive transcription factor ERF003-like OS=Momordica charantia OX=3...	[more]
A0A498HUD1	1.0e-59	67.58	AP2 domain class transcription factor OS=Malus domestica OX=3750 GN=ERF10 PE=2 S...	[more]

BLAST of HG10013627 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25190.1	3.1e-56	61.54	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	1.3e-25	58.42	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	4.5e-23	42.78	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	3.8e-22	77.97	Integrase-type DNA-binding superfamily protein	[more]
AT4G13620.1	9.4e-21	51.52	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 8..19 score: 66.97 coord: 30..46 score: 70.91
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 7..70 e-value: 1.7E-40 score: 150.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 7..56 e-value: 6.4E-12 score: 45.5
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 7..64 score: 21.126986
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 6..66 e-value: 1.38494E-34 score: 114.676
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 6..65 e-value: 9.9E-27 score: 94.9
None	No IPR available	PANTHER	PTHR31194:SF112	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003	coord: 1..182
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..182
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 7..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013627.1	HG10013627.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity