HG10013620 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCTGAACCAGTACAATCCATTTTCATTCACTCACAAGCTCAAATCCTCAATCCGTTGTTTCCGCCCCGATCATGGCGATTTGGACGAAACCGAAGACGATTCTTCTCCAAGAACTCCTAGATCGCCTCTCAAATCAATGGCGTCAGAGCTCCCGGAGCTCCGGGGAATGTGCCGGAATCTCGTCGCTCGAATCAGCAGGAGTCGCCGACGGTACCATCACTCCGCCGATTTCCGATACGATCCTTCGAGTTATGCCCTTAATTTCGAGGACGAACAGATTCGCGATGATGATGAGTTTCCTATTAGGGATTTCACTTCGAGATTGCCGGCGTCGCCGCCACTGAAATGA ATGATGCTGAACCAGTACAATCCATTTTCATTCACTCACAAGCTCAAATCCTCAATCCGTTGTTTCCGCCCCGATCATGGCGATTTGGACGAAACCGAAGACGATTCTTCTCCAAGAACTCCTAGATCGCCTCTCAAATCAATGGCGTCAGAGCTCCCGGAGCTCCGGGGAATGTGCCGGAATCTCGTCGCTCGAATCAGCAGGAGTCGCCGACGGTACCATCACTCCGCCGATTTCCGATACGATCCTTCGAGTTATGCCCTTAATTTCGAGGACGAACAGATTCGCGATGATGATGAGTTTCCTATTAGGGATTTCACTTCGAGATTGCCGGCGTCGCCGCCACTGAAATGA ATGATGCTGAACCAGTACAATCCATTTTCATTCACTCACAAGCTCAAATCCTCAATCCGTTGTTTCCGCCCCGATCATGGCGATTTGGACGAAACCGAAGACGATTCTTCTCCAAGAACTCCTAGATCGCCTCTCAAATCAATGGCGTCAGAGCTCCCGGAGCTCCGGGGAATGTGCCGGAATCTCGTCGCTCGAATCAGCAGGAGTCGCCGACGGTACCATCACTCCGCCGATTTCCGATACGATCCTTCGAGTTATGCCCTTAATTTCGAGGACGAACAGATTCGCGATGATGATGAGTTTCCTATTAGGGATTTCACTTCGAGATTGCCGGCGTCGCCGCCACTGAAATGA MMLNQYNPFSFTHKLKSSIRCFRPDHGDLDETEDDSSPRTPRSPLKSMASELPELRGMCRNLVARISRSRRRYHHSADFRYDPSSYALNFEDEQIRDDDEFPIRDFTSRLPASPPLK Homology
BLAST of HG10013620 vs. NCBI nr
Match: XP_022981208.1 (uncharacterized protein LOC111480417 [Cucurbita maxima]) HSP 1 Score: 208.8 bits (530), Expect = 2.6e-50 Identity = 100/115 (86.96%), Postives = 106/115 (92.17%), Query Frame = 0
BLAST of HG10013620 vs. NCBI nr
Match: XP_023523424.1 (uncharacterized protein LOC111787637 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 207.6 bits (527), Expect = 5.8e-50 Identity = 101/114 (88.60%), Postives = 104/114 (91.23%), Query Frame = 0
BLAST of HG10013620 vs. NCBI nr
Match: XP_022940408.1 (uncharacterized protein LOC111446022 [Cucurbita moschata] >KAG6608139.1 hypothetical protein SDJN03_01481, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 206.8 bits (525), Expect = 9.9e-50 Identity = 101/115 (87.83%), Postives = 104/115 (90.43%), Query Frame = 0
BLAST of HG10013620 vs. NCBI nr
Match: KAG7031776.1 (hypothetical protein SDJN02_05817, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 204.9 bits (520), Expect = 3.8e-49 Identity = 100/114 (87.72%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of HG10013620 vs. NCBI nr
Match: XP_022138148.1 (uncharacterized protein LOC111009386 [Momordica charantia]) HSP 1 Score: 183.7 bits (465), Expect = 9.0e-43 Identity = 93/116 (80.17%), Postives = 100/116 (86.21%), Query Frame = 0
BLAST of HG10013620 vs. ExPASy TrEMBL
Match: A0A6J1J1H3 (uncharacterized protein LOC111480417 OS=Cucurbita maxima OX=3661 GN=LOC111480417 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.3e-50 Identity = 100/115 (86.96%), Postives = 106/115 (92.17%), Query Frame = 0
BLAST of HG10013620 vs. ExPASy TrEMBL
Match: A0A6J1FP70 (uncharacterized protein LOC111446022 OS=Cucurbita moschata OX=3662 GN=LOC111446022 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 4.8e-50 Identity = 101/115 (87.83%), Postives = 104/115 (90.43%), Query Frame = 0
BLAST of HG10013620 vs. ExPASy TrEMBL
Match: A0A6J1CC83 (uncharacterized protein LOC111009386 OS=Momordica charantia OX=3673 GN=LOC111009386 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 4.3e-43 Identity = 93/116 (80.17%), Postives = 100/116 (86.21%), Query Frame = 0
BLAST of HG10013620 vs. ExPASy TrEMBL
Match: A0A5A7VBS3 (DNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00970 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.3e-39 Identity = 92/117 (78.63%), Postives = 98/117 (83.76%), Query Frame = 0
BLAST of HG10013620 vs. ExPASy TrEMBL
Match: A0A1S3BVQ9 (uncharacterized protein LOC103493778 OS=Cucumis melo OX=3656 GN=LOC103493778 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.3e-39 Identity = 92/117 (78.63%), Postives = 98/117 (83.76%), Query Frame = 0
BLAST of HG10013620 vs. TAIR 10
Match: AT5G11070.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 3.3e-11 Identity = 47/97 (48.45%), Postives = 55/97 (56.70%), Query Frame = 0
BLAST of HG10013620 vs. TAIR 10
Match: AT5G35090.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 54.3 bits (129), Expect = 7.6e-08 Identity = 35/88 (39.77%), Postives = 48/88 (54.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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