HG10013615 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013615
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Serine-rich protein
Location	Chr02: 3047238 .. 3047879 (+)
RNA-Seq Expression	HG10013615
Synteny	HG10013615

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGACTTCATCTTCTTCCTCGAAAACCAGATCCAGCGGCCCGGTGCTCCGATCACTCTCGCCGGGCGGCCGGTTCTGTAACTCTCCTTCTTTGTCCTCTTCTACGTCCGCCTTTGCTTCATCTTCAAGCTTTTACTCGTCTTCTTCTACTTTCCGTCACGATGACCATCGTGATTTTCGCAGCCATCATCATCAACATAGATCCACATCTCCTAGCCGTGTTAATGTTTATTCATCTCCTTCTCTTACTCCTTCTGTCCGTTTCTTTATCAATAACCGTTCGAGTTCTCCGAATCGATCGGCTATCGTTTCCAGGAAAAATCGGCCGGTGTCTAATGTTAAAAGGACTTGTATGTGTTCTCCGACCACGCATCCAGGCTCGTTCCGGTGTAGTCTCCACAAAAACGTTTCGAATAGCGGTGGCCATAGCCAGGCAGCGTCGTTTCCTTCAACCAGGTTGAATATGTGGAGATCGGCTATGGCGAACTCGATTGTACGAATCGGCGGTGTAGAAGGAGAGTTGGTGAAACGTGCATTGACTACTTTGATTCGGCCTTCTTCGCACCAGCAGAGGAGGAGAGCGGCATTTCAACCTAGATCTAGTCGGCTCTCGGTCATGACCAAAGCCGACGACGCTTGA

mRNA sequence

ATGGTGACTTCATCTTCTTCCTCGAAAACCAGATCCAGCGGCCCGGTGCTCCGATCACTCTCGCCGGGCGGCCGGTTCTGTAACTCTCCTTCTTTGTCCTCTTCTACGTCCGCCTTTGCTTCATCTTCAAGCTTTTACTCGTCTTCTTCTACTTTCCGTCACGATGACCATCGTGATTTTCGCAGCCATCATCATCAACATAGATCCACATCTCCTAGCCGTGTTAATGTTTATTCATCTCCTTCTCTTACTCCTTCTGTCCGTTTCTTTATCAATAACCGTTCGAGTTCTCCGAATCGATCGGCTATCGTTTCCAGGAAAAATCGGCCGGTGTCTAATGTTAAAAGGACTTGTATGTGTTCTCCGACCACGCATCCAGGCTCGTTCCGGTGTAGTCTCCACAAAAACGTTTCGAATAGCGGTGGCCATAGCCAGGCAGCGTCGTTTCCTTCAACCAGGTTGAATATGTGGAGATCGGCTATGGCGAACTCGATTGTACGAATCGGCGGTGTAGAAGGAGAGTTGGTGAAACGTGCATTGACTACTTTGATTCGGCCTTCTTCGCACCAGCAGAGGAGGAGAGCGGCATTTCAACCTAGATCTAGTCGGCTCTCGGTCATGACCAAAGCCGACGACGCTTGA

Coding sequence (CDS)

ATGGTGACTTCATCTTCTTCCTCGAAAACCAGATCCAGCGGCCCGGTGCTCCGATCACTCTCGCCGGGCGGCCGGTTCTGTAACTCTCCTTCTTTGTCCTCTTCTACGTCCGCCTTTGCTTCATCTTCAAGCTTTTACTCGTCTTCTTCTACTTTCCGTCACGATGACCATCGTGATTTTCGCAGCCATCATCATCAACATAGATCCACATCTCCTAGCCGTGTTAATGTTTATTCATCTCCTTCTCTTACTCCTTCTGTCCGTTTCTTTATCAATAACCGTTCGAGTTCTCCGAATCGATCGGCTATCGTTTCCAGGAAAAATCGGCCGGTGTCTAATGTTAAAAGGACTTGTATGTGTTCTCCGACCACGCATCCAGGCTCGTTCCGGTGTAGTCTCCACAAAAACGTTTCGAATAGCGGTGGCCATAGCCAGGCAGCGTCGTTTCCTTCAACCAGGTTGAATATGTGGAGATCGGCTATGGCGAACTCGATTGTACGAATCGGCGGTGTAGAAGGAGAGTTGGTGAAACGTGCATTGACTACTTTGATTCGGCCTTCTTCGCACCAGCAGAGGAGGAGAGCGGCATTTCAACCTAGATCTAGTCGGCTCTCGGTCATGACCAAAGCCGACGACGCTTGA

Protein sequence

MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSSFYSSSSTFRHDDHRDFRSHHHQHRSTSPSRVNVYSSPSLTPSVRFFINNRSSSPNRSAIVSRKNRPVSNVKRTCMCSPTTHPGSFRCSLHKNVSNSGGHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKRALTTLIRPSSHQQRRRAAFQPRSSRLSVMTKADDA

Homology

[Close]

BLAST of HG10013615 vs. NCBI nr
Match: XP_038899899.1 (uncharacterized protein LOC120087091 [Benincasa hispida])

HSP 1 Score: 375.9 bits (964), Expect = 2.2e-100
Identity = 202/213 (94.84%), Postives = 209/213 (98.12%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSSFYSSSSTFRHDDHRDF 60
           MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSSFYSSSSTFRHDDHRDF
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSSFYSSSSTFRHDDHRDF 60

Query: 61  RSHHHQHRSTSPSRVNVYSSPSLTPSVRFFINNRSSSPNRSAIVSRKNRPVSNVKRTCMC 120
           RSH+HQ RSTSPSRVNVYSSPSLTPSVRFFI+NRSSSPNRS IVSRK+RPVSNVKRTCMC
Sbjct: 61  RSHNHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKSRPVSNVKRTCMC 120

Query: 121 SPTTHPGSFRCSLHKNVSNSGGHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180
           SPTTHPGSFRCSLHKNV++SG HSQA SFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL
Sbjct: 121 SPTTHPGSFRCSLHKNVTSSGDHSQAVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180

Query: 181 TTLIRPSSHQQRRRAAFQPRSSRLSVMTKADDA 214
           TTLIRPSSHQQRRRAAFQPRSSRLSVM+KAD+A
Sbjct: 181 TTLIRPSSHQQRRRAAFQPRSSRLSVMSKADEA 213

[Close]

BLAST of HG10013615 vs. NCBI nr
Match: XP_008452898.1 (PREDICTED: putative protein TPRXL [Cucumis melo] >ADN34124.1 serine-rich protein [Cucumis melo subsp. melo])

HSP 1 Score: 373.6 bits (958), Expect = 1.1e-99
Identity = 201/213 (94.37%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSSFYSSSSTFRHDDHRDF 60
           MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSS SAFASSSSFYSSSSTFRHDDHRDF
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSPSAFASSSSFYSSSSTFRHDDHRDF 60

Query: 61  RSHHHQHRSTSPSRVNVYSSPSLTPSVRFFINNRSSSPNRSAIVSRKNRPVSNVKRTCMC 120
            +H+HQ RSTSPSRVNVYSSPSLTPSVRFFI+NRSSSPNRS IVSRKNRPVSNVKRTCMC
Sbjct: 61  PTHNHQTRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 120

Query: 121 SPTTHPGSFRCSLHKNVSNSGGHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180
           SPTTHPGSFRCSLHKNVS+ GGHSQ  SFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL
Sbjct: 121 SPTTHPGSFRCSLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180

Query: 181 TTLIRPSSHQQRRRAAFQPRSSRLSVMTKADDA 214
           TTLIRPSSHQQRRRAAFQPRSSRLSVM+KADDA
Sbjct: 181 TTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 213

[Close]

BLAST of HG10013615 vs. NCBI nr
Match: XP_004145523.1 (uncharacterized protein LOC101218391 [Cucumis sativus] >KGN55469.1 hypothetical protein Csa_012851 [Cucumis sativus])

HSP 1 Score: 364.8 bits (935), Expect = 5.2e-97
Identity = 196/212 (92.45%), Postives = 203/212 (95.75%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSSFYSSSSTFRHDDHRDF 60
           MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSS+FYSSSSTFRHDDHRDF
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSTFYSSSSTFRHDDHRDF 60

Query: 61  RSHHHQHRSTSPSRVNVYSSPSLTPSVRFFINNRSSSPNRSAIVSRKNRPVSNVKRTCMC 120
            +H+H  RSTSPSRVNVYSSPSLT SVRFFI+NRSSSPNRS IVSRKNRPVSNVKRTCMC
Sbjct: 61  PNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 120

Query: 121 SPTTHPGSFRCSLHKNVSNSGGHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180
           SPTTHPGSFRCSLHKNVS+ GGHSQ  SFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL
Sbjct: 121 SPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180

Query: 181 TTLIRPSSHQQRRRAAFQPRSSRLSVMTKADD 213
           TTLIRPSSHQQRRRA+FQPRSSRLSVM+KA D
Sbjct: 181 TTLIRPSSHQQRRRASFQPRSSRLSVMSKAAD 212

[Close]

BLAST of HG10013615 vs. NCBI nr
Match: XP_023536440.1 (uncharacterized serine-rich protein C215.13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362.8 bits (930), Expect = 2.0e-96
Identity = 199/215 (92.56%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFAS--SSSFYSSSSTFRHDDHR 60
           MVTSSSSSKTRSSGPVLRS SPGGRFCNS SLSSS SAFAS  SS+FYSS+STFR DDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60

Query: 61  DFRSHHHQHRSTSPSRVNVYSSPSLTPSVRFFINNRSSSPNRSAIVSRKNRPVSNVKRTC 120
            FRSHHHQ RSTSPSRVNVYSSPSLTPSVRFFI+NRSSSPNRSAIVSRKNRPVSNVKRTC
Sbjct: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSNSGGHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180
           MCSPTTHPGSFRCSLHKNVS+SG HSQ+ASFPSTRLNMWRSAMANSIVRIGGVEGELVKR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQSASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMTKADDA 214
           ALTTLIRPSSHQQRRRA+FQPRSSRLSVM+KADDA
Sbjct: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215

[Close]

BLAST of HG10013615 vs. NCBI nr
Match: XP_022937125.1 (uncharacterized protein LOC111443517 [Cucurbita moschata] >KAG7024442.1 hypothetical protein SDJN02_13257, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 362.5 bits (929), Expect = 2.6e-96
Identity = 199/215 (92.56%), Postives = 205/215 (95.35%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFAS--SSSFYSSSSTFRHDDHR 60
           MVTSSSSSKTRSSGPVLRS SPGGRFCNS SLSSS SAFAS  SS+FYSS+STFR DDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60

Query: 61  DFRSHHHQHRSTSPSRVNVYSSPSLTPSVRFFINNRSSSPNRSAIVSRKNRPVSNVKRTC 120
            FRSHHHQ RSTSPSRVNVYSSPSLTPSVRFFI+NRSSSPNRS IVSRKNRPVSNVKRTC
Sbjct: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSNSGGHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180
           MCSPTTHPGSFRCSLHKNVS+SG HSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMTKADDA 214
           ALTTLIRPSSHQQRRRA+FQPRSSRLSVM+KADDA
Sbjct: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215

[Close]

BLAST of HG10013615 vs. ExPASy TrEMBL
Match: E5GCC5 (Serine-rich protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 5.4e-100
Identity = 201/213 (94.37%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSSFYSSSSTFRHDDHRDF 60
           MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSS SAFASSSSFYSSSSTFRHDDHRDF
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSPSAFASSSSFYSSSSTFRHDDHRDF 60

Query: 61  RSHHHQHRSTSPSRVNVYSSPSLTPSVRFFINNRSSSPNRSAIVSRKNRPVSNVKRTCMC 120
            +H+HQ RSTSPSRVNVYSSPSLTPSVRFFI+NRSSSPNRS IVSRKNRPVSNVKRTCMC
Sbjct: 61  PTHNHQTRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 120

Query: 121 SPTTHPGSFRCSLHKNVSNSGGHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180
           SPTTHPGSFRCSLHKNVS+ GGHSQ  SFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL
Sbjct: 121 SPTTHPGSFRCSLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180

Query: 181 TTLIRPSSHQQRRRAAFQPRSSRLSVMTKADDA 214
           TTLIRPSSHQQRRRAAFQPRSSRLSVM+KADDA
Sbjct: 181 TTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 213

[Close]

BLAST of HG10013615 vs. ExPASy TrEMBL
Match: A0A1S3BUD9 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103493784 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 5.4e-100
Identity = 201/213 (94.37%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSSFYSSSSTFRHDDHRDF 60
           MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSS SAFASSSSFYSSSSTFRHDDHRDF
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSPSAFASSSSFYSSSSTFRHDDHRDF 60

Query: 61  RSHHHQHRSTSPSRVNVYSSPSLTPSVRFFINNRSSSPNRSAIVSRKNRPVSNVKRTCMC 120
            +H+HQ RSTSPSRVNVYSSPSLTPSVRFFI+NRSSSPNRS IVSRKNRPVSNVKRTCMC
Sbjct: 61  PTHNHQTRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 120

Query: 121 SPTTHPGSFRCSLHKNVSNSGGHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180
           SPTTHPGSFRCSLHKNVS+ GGHSQ  SFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL
Sbjct: 121 SPTTHPGSFRCSLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180

Query: 181 TTLIRPSSHQQRRRAAFQPRSSRLSVMTKADDA 214
           TTLIRPSSHQQRRRAAFQPRSSRLSVM+KADDA
Sbjct: 181 TTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 213

[Close]

BLAST of HG10013615 vs. ExPASy TrEMBL
Match: A0A0A0L364 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652810 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.5e-97
Identity = 196/212 (92.45%), Postives = 203/212 (95.75%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSSFYSSSSTFRHDDHRDF 60
           MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSS+FYSSSSTFRHDDHRDF
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSTFYSSSSTFRHDDHRDF 60

Query: 61  RSHHHQHRSTSPSRVNVYSSPSLTPSVRFFINNRSSSPNRSAIVSRKNRPVSNVKRTCMC 120
            +H+H  RSTSPSRVNVYSSPSLT SVRFFI+NRSSSPNRS IVSRKNRPVSNVKRTCMC
Sbjct: 61  PNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 120

Query: 121 SPTTHPGSFRCSLHKNVSNSGGHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180
           SPTTHPGSFRCSLHKNVS+ GGHSQ  SFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL
Sbjct: 121 SPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180

Query: 181 TTLIRPSSHQQRRRAAFQPRSSRLSVMTKADD 213
           TTLIRPSSHQQRRRA+FQPRSSRLSVM+KA D
Sbjct: 181 TTLIRPSSHQQRRRASFQPRSSRLSVMSKAAD 212

[Close]

BLAST of HG10013615 vs. ExPASy TrEMBL
Match: A0A6J1FFN3 (uncharacterized protein LOC111443517 OS=Cucurbita moschata OX=3662 GN=LOC111443517 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.2e-96
Identity = 199/215 (92.56%), Postives = 205/215 (95.35%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFAS--SSSFYSSSSTFRHDDHR 60
           MVTSSSSSKTRSSGPVLRS SPGGRFCNS SLSSS SAFAS  SS+FYSS+STFR DDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60

Query: 61  DFRSHHHQHRSTSPSRVNVYSSPSLTPSVRFFINNRSSSPNRSAIVSRKNRPVSNVKRTC 120
            FRSHHHQ RSTSPSRVNVYSSPSLTPSVRFFI+NRSSSPNRS IVSRKNRPVSNVKRTC
Sbjct: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSNSGGHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180
           MCSPTTHPGSFRCSLHKNVS+SG HSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMTKADDA 214
           ALTTLIRPSSHQQRRRA+FQPRSSRLSVM+KADDA
Sbjct: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215

[Close]

BLAST of HG10013615 vs. ExPASy TrEMBL
Match: A0A5A7VBK5 (TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00920 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 5.2e-95
Identity = 190/202 (94.06%), Postives = 195/202 (96.53%), Query Frame = 0


Query: 12  SSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSSFYSSSSTFRHDDHRDFRSHHHQHRSTS 71
           SSGPVLRSLSPGGRFCNSPSLSSS SAFASSSSFYSSSSTFRHDDHRDF +H+HQ RSTS
Sbjct: 41  SSGPVLRSLSPGGRFCNSPSLSSSPSAFASSSSFYSSSSTFRHDDHRDFPTHNHQTRSTS 100

Query: 72  PSRVNVYSSPSLTPSVRFFINNRSSSPNRSAIVSRKNRPVSNVKRTCMCSPTTHPGSFRC 131
           PSRVNVYSSPSLTPSVRFFI+NRSSSPNRS IVSRKNRPVSNVKRTCMCSPTTHPGSFRC
Sbjct: 101 PSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMCSPTTHPGSFRC 160

Query: 132 SLHKNVSNSGGHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKRALTTLIRPSSHQQ 191
           SLHKNVS+ GGHSQ  SFPSTRLNMWRSAMANSIVRIGGVEGELVKRALTTLIRPSSHQQ
Sbjct: 161 SLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRALTTLIRPSSHQQ 220

Query: 192 RRRAAFQPRSSRLSVMTKADDA 214
           RRRAAFQPRSSRLSVM+KADDA
Sbjct: 221 RRRAAFQPRSSRLSVMSKADDA 242

[Close]

BLAST of HG10013615 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 208.8 bits (530), Expect = 4.4e-54
Identity = 126/215 (58.60%), Postives = 159/215 (73.95%), Query Frame = 0


Query: 5   SSSSKTRSSGPVLRSLSPGGRFCNSPSL---SSSTSAFASS-SSFYSSSSTFRHDDHRDF 64
           ++SS+T+S+GPVLRS SP GRFC   S    SSS+SAFASS SS +SS S+    +HR  
Sbjct: 3   TTSSRTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAFFSNHRHH 62

Query: 65  RSHHHQHRSTSPSRVNVYSSPSLTPSVRFFINNRSSSPNRSAIVSRKNRPVSN---VKRT 124
            S+H  HRS SP+RVN+Y++  ++ S R+ +++RS SP   +I   KN+P S+   + R 
Sbjct: 63  ESNHSHHRSASPTRVNLYTAQPMSQSFRYSLDSRSISPTNKSISVSKNQPPSHNHKISRR 122

Query: 125 CMCSPTTHPGSFRCSLHKNVSNSGGHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVK 184
           CMCSPTTHPGSFRCSLHKNV+N  G    AS+ +  LNM RSAM NS+VRIGGVEGE V+
Sbjct: 123 CMCSPTTHPGSFRCSLHKNVANPHGQG-TASYTTNGLNMRRSAMTNSLVRIGGVEGEWVR 182

Query: 185 RALTTLIRPSSHQQRRRAAFQPRSSRLSVMTKADD 213
           RALTTLIRPSSH  +RRAA+QPR SRLS+M KAD+
Sbjct: 183 RALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKADE 216

[Close]

BLAST of HG10013615 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 198.7 bits (504), Expect = 4.6e-51
Identity = 128/220 (58.18%), Postives = 158/220 (71.82%), Query Frame = 0


Query: 5   SSSSKTRSSGPV-LRSLSPGGRFC-----NSPSLSSSTSAFASS-SSFYSSSSTFRHDDH 64
           +SS  TRS+G   LRS SP GRFC       PS S S+S FASS SS +SS ST     H
Sbjct: 4   TSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSH 63

Query: 65  RDFRSHHHQHRSTSPSRVNVYSSPSLTPSVRFFINNRSSSPNRSAIVSRKNRP-----VS 124
              +++HHQHRS SP+RVN+++S  +T S R+ I+NRS SPNRS  VS  N+P     + 
Sbjct: 64  N--QNNHHQHRSASPTRVNLFTSAPMTQSFRYSIDNRSISPNRSIAVS-SNKPSNHHKIP 123

Query: 125 NVKRTCMCSPTTHPGSFRCSLHKNVSNSGGHSQAASFPSTRLNMWRSAMANSIVRIGGVE 184
           + +R CMCSPTTHPGSFRCSLHKNV+N  G    AS+ +  LNM RSAM NS+VRIGGVE
Sbjct: 124 DSRRRCMCSPTTHPGSFRCSLHKNVANPHGQG-TASYTTNGLNMRRSAMTNSLVRIGGVE 183

Query: 185 GELVKRALTTLIRPSSHQQRRRAAFQPRSSRLSVMTKADD 213
           GE V+RALTTLIRPSSHQ +RR+A++PR SRL+ M+KA+D
Sbjct: 184 GEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

[Close]

BLAST of HG10013615 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 198.7 bits (504), Expect = 4.6e-51
Identity = 128/220 (58.18%), Postives = 158/220 (71.82%), Query Frame = 0


Query: 5   SSSSKTRSSGPV-LRSLSPGGRFC-----NSPSLSSSTSAFASS-SSFYSSSSTFRHDDH 64
           +SS  TRS+G   LRS SP GRFC       PS S S+S FASS SS +SS ST     H
Sbjct: 4   TSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSH 63

Query: 65  RDFRSHHHQHRSTSPSRVNVYSSPSLTPSVRFFINNRSSSPNRSAIVSRKNRP-----VS 124
              +++HHQHRS SP+RVN+++S  +T S R+ I+NRS SPNRS  VS  N+P     + 
Sbjct: 64  N--QNNHHQHRSASPTRVNLFTSAPMTQSFRYSIDNRSISPNRSIAVS-SNKPSNHHKIP 123

Query: 125 NVKRTCMCSPTTHPGSFRCSLHKNVSNSGGHSQAASFPSTRLNMWRSAMANSIVRIGGVE 184
           + +R CMCSPTTHPGSFRCSLHKNV+N  G    AS+ +  LNM RSAM NS+VRIGGVE
Sbjct: 124 DSRRRCMCSPTTHPGSFRCSLHKNVANPHGQG-TASYTTNGLNMRRSAMTNSLVRIGGVE 183

Query: 185 GELVKRALTTLIRPSSHQQRRRAAFQPRSSRLSVMTKADD 213
           GE V+RALTTLIRPSSHQ +RR+A++PR SRL+ M+KA+D
Sbjct: 184 GEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

[Close]

BLAST of HG10013615 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 78.2 bits (191), Expect = 9.0e-15
Identity = 62/172 (36.05%), Postives = 85/172 (49.42%), Query Frame = 0


Query: 47  SSSSTFR--HDDHRDFRSHHHQHRSTSPSRVNVYSSPSLTPSVRFFINNRSSSPNRSAIV 106
           SS S  R      R   +HHH HR  SPS  N     +L   ++F+  +  S P  S + 
Sbjct: 7   SSRSVLRPLSSSQRLHNNHHHHHRQRSPSPCN----KNLNLRLKFY--SPGSIPKPSVVT 66

Query: 107 SRKNRPVSNVKRTCMCSPTTHPGSFRCSLHKNVSNSGGHSQAASF------------PST 166
              N      KR C+CSPTTHPGSFRCS H+ + +    + A+S              + 
Sbjct: 67  VSSNH---QTKRKCLCSPTTHPGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNV 126

Query: 167 RLNMWRSAMANSIVRIGGVEGELVKRAL-TTLIRPSSHQQRRRAAFQPRSSR 204
            LN+ + A+ NS+ +IG VE E  +R+L   L +PSS    RR  F+PR SR
Sbjct: 127 GLNLRKLALMNSLAKIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]

BLAST of HG10013615 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 2.9e-05
Identity = 18/31 (58.06%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 108 NRPVSNVKRTCMCSPTTHPGSFRCSLHKNVS 139
           +R  S  K  C+CSPTTHPGSFRC +H+++S
Sbjct: 34  SRQTSMTKTNCLCSPTTHPGSFRCRIHRSLS 64

The following BLAST results are available for this feature:

BLAST of HG10013615 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899899.1	2.2e-100	94.84	uncharacterized protein LOC120087091 [Benincasa hispida]	[more]
XP_008452898.1	1.1e-99	94.37	PREDICTED: putative protein TPRXL [Cucumis melo] >ADN34124.1 serine-rich protein...	[more]
XP_004145523.1	5.2e-97	92.45	uncharacterized protein LOC101218391 [Cucumis sativus] >KGN55469.1 hypothetical ...	[more]
XP_023536440.1	2.0e-96	92.56	uncharacterized serine-rich protein C215.13 [Cucurbita pepo subsp. pepo]	[more]
XP_022937125.1	2.6e-96	92.56	uncharacterized protein LOC111443517 [Cucurbita moschata] >KAG7024442.1 hypothet...	[more]

BLAST of HG10013615 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10013615 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GCC5	5.4e-100	94.37	Serine-rich protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BUD9	5.4e-100	94.37	Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103493784 PE=4 SV=1	[more]
A0A0A0L364	2.5e-97	92.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652810 PE=4 SV=1	[more]
A0A6J1FFN3	1.2e-96	92.56	uncharacterized protein LOC111443517 OS=Cucurbita moschata OX=3662 GN=LOC1114435...	[more]
A0A5A7VBK5	5.2e-95	94.06	TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00920 ...	[more]

BLAST of HG10013615 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11090.1	4.4e-54	58.60	serine-rich protein-related	[more]
AT5G25280.1	4.6e-51	58.18	serine-rich protein-related	[more]
AT5G25280.2	4.6e-51	58.18	serine-rich protein-related	[more]
AT5G20370.1	9.0e-15	36.05	serine-rich protein-related	[more]
AT1G67910.1	2.9e-05	58.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..205
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 6..212
None	No IPR available	PANTHER	PTHR33132:SF75	SUBFAMILY NOT NAMED	coord: 6..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013615.1	HG10013615.1	mRNA