HG10013568 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013568
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	V-type proton ATPase subunit c''2
Location	Chr02: 2673770 .. 2675298 (+)
RNA-Seq Expression	HG10013568
Synteny	HG10013568

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGCCTCGAACATGGCGGCATCTCTAAGCTCTTGGTCCCACGCGCTCGTCAGAATCTCCCCTTACACCTTCTCCGCCGTGGGCATTGCCATAGCCATCGGCGTCTCTGTCCTCGGAGCCGCCTGGTATTCATTCCATTTCATCCTTCTTGAAGCCCCTTTTTCGATTTAGGGTTACTTTCTCTTGAGCTTCTATCTAATTGTGGATTGCTGTTATTTCAGGGGAATCTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATCAAAGTTCCGCGTATTACCTCGAAGAATCTAATTAGGTAAGAAACCCTATTTCGATTCTTATTAACCCCGATTCGACATTTCCTTAGATGTATGTGGAGTTTGATGGAGTATACACTAATTGTTCAATGTTGATCTTCAGTCTTCATAGTGTTGTCTTTGGACTTGTTCAGAGAAGTTCAAAAGTGTGAAGTTTTCAATTGCTTCGTGGTGACTGATTGATCCATGGTTGTTGTTTAAGCTTAGATCATAGAAGTATCAGGAGATTATTCTGTTTTGGCTGTAGAATTTGGATAGAATTCGGACCACTTATGCTTTTGAATCTCAAATTTCCTTTCCATTGTTGAGGTTGTCATGATATATCATGTGGTTGATTCAAACGGTGCTTTGACAGTGATCAACAATTGATGATTGGCTCTACTTTTCAACCTGTGCAGTATATTAAATTTCTTCGGTATCTAGTGTTAAATTTTAACAAACAGCTGGCATTGGTTTTGTGATTGGACATGGAGGTTTGGGAGGTGGTGAAGTTTAATGCCTCTTAGAGTCGTTTGGATTAACTTTCTAAGTGTTTATAAACACTACTTTTGTACTTATAACACTTATTTAAACACTCATAAAGTCAATCCAAACGGACCCTTAGCAGCGTTGGTCACTAGATTTTTTCGAAACTATGGTATTGGTCATGTTCGAAAATTGGAGTCTTTGAACAAGAGCATTCTTTCTTTTTTTTTTTTCAATGAAAGCTGTATTTTTTTCAATGAGCATTTGTGATTAATTTGAATTTTGGACTGTCTTTATGAATGATTCGTTGTTTTCTTTCAGTGTAATTTTCTGTGAAGCTGTGGCCATATATGGTGTCATTGTGGCCATCATTCTACAAACAAAACTGGAGAGTGTTTCAGCCTCTCAAATTTATGCTCCTGAGTCTCTAAGAGCAGGATATTCAATTTTTGCCTCTGGGATTATCGTCGGCTTTGCCAACCTAGTTTGCGGGTTCGATCCTTCATCTCAAAACATTTTCATTGGTAGAATGAAAAAAAACCCCATCAATTGAAATTTTTTAACTAGGAGATATATTTTGTTTGTAAAGGTTGTGTGTAGGGATTATTGGCAGCAGTTGTGCATTGTCTGATGCCCAAAACTCATCCCTTTTTGTAAAGATTCTTGTGATCGAGATTTTCGGAAGCGCGCTCGGGTTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTGCAAAGGCAGTTTAG

mRNA sequence

ATGTCCGCCTCGAACATGGCGGCATCTCTAAGCTCTTGGTCCCACGCGCTCGTCAGAATCTCCCCTTACACCTTCTCCGCCGTGGGCATTGCCATAGCCATCGGCGTCTCTGTCCTCGGAGCCGCCTGGGGAATCTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATCAAAGTTCCGCGTATTACCTCGAAGAATCTAATTAGTGTAATTTTCTGTGAAGCTGTGGCCATATATGGTGTCATTGTGGCCATCATTCTACAAACAAAACTGGAGAGTGTTTCAGCCTCTCAAATTTATGCTCCTGAGTCTCTAAGAGCAGGATATTCAATTTTTGCCTCTGGGATTATCGTCGGCTTTGCCAACCTAGTTTGCGGGTTCGATCCTTCATCTCAAAACATTTTCATTGGGATTATTGGCAGCAGTTGTGCATTGTCTGATGCCCAAAACTCATCCCTTTTTGTAAAGATTCTTGTGATCGAGATTTTCGGAAGCGCGCTCGGGTTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTGCAAAGGCAGTTTAG

Coding sequence (CDS)

ATGTCCGCCTCGAACATGGCGGCATCTCTAAGCTCTTGGTCCCACGCGCTCGTCAGAATCTCCCCTTACACCTTCTCCGCCGTGGGCATTGCCATAGCCATCGGCGTCTCTGTCCTCGGAGCCGCCTGGGGAATCTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATCAAAGTTCCGCGTATTACCTCGAAGAATCTAATTAGTGTAATTTTCTGTGAAGCTGTGGCCATATATGGTGTCATTGTGGCCATCATTCTACAAACAAAACTGGAGAGTGTTTCAGCCTCTCAAATTTATGCTCCTGAGTCTCTAAGAGCAGGATATTCAATTTTTGCCTCTGGGATTATCGTCGGCTTTGCCAACCTAGTTTGCGGGTTCGATCCTTCATCTCAAAACATTTTCATTGGGATTATTGGCAGCAGTTGTGCATTGTCTGATGCCCAAAACTCATCCCTTTTTGTAAAGATTCTTGTGATCGAGATTTTCGGAAGCGCGCTCGGGTTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTGCAAAGGCAGTTTAG

Protein sequence

MSASNMAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGFANLVCGFDPSSQNIFIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKAV

Homology

[Close]

BLAST of HG10013568 vs. NCBI nr
Match: XP_038898797.1 (V-type proton ATPase subunit c''2 isoform X2 [Benincasa hispida])

HSP 1 Score: 305.1 bits (780), Expect = 4.3e-79
Identity = 174/189 (92.06%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 1   MSASNMAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVP 60
           M ASNMAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIK P
Sbjct: 1   MPASNMAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQI+APESL AGYSIF+SGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIHAPESLTAGYSIFSSGIIVGF 120

Query: 121 ANLVCGFDPSSQNIFIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180
           ANLVCG       + +GIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA
Sbjct: 121 ANLVCG-------LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180

Query: 181 QATWPAKAV 190
           QATWPAKAV
Sbjct: 181 QATWPAKAV 182

[Close]

BLAST of HG10013568 vs. NCBI nr
Match: XP_023523441.1 (V-type proton ATPase subunit c''2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301.2 bits (770), Expect = 6.2e-78
Identity = 171/189 (90.48%), Postives = 175/189 (92.59%), Query Frame = 0


Query: 1   MSASNMAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVP 60
           MS SNMA  L SWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIK P
Sbjct: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV AS+IYAPESLRAGYSIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGF 120

Query: 121 ANLVCGFDPSSQNIFIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180
           ANLVCG       + +G+IGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA
Sbjct: 121 ANLVCG-------LCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180

Query: 181 QATWPAKAV 190
           QATWPAKAV
Sbjct: 181 QATWPAKAV 182

[Close]

BLAST of HG10013568 vs. NCBI nr
Match: XP_022981207.1 (V-type proton ATPase subunit c''2 [Cucurbita maxima])

HSP 1 Score: 300.8 bits (769), Expect = 8.1e-78
Identity = 170/189 (89.95%), Postives = 175/189 (92.59%), Query Frame = 0


Query: 1   MSASNMAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVP 60
           MS SNMA  L SWSHALVRISPYTFSAVGIAIAIG+SVLGAAWGIYITGSSLIGAAIK P
Sbjct: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGISVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV AS+IYAPESLRAGYSIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGF 120

Query: 121 ANLVCGFDPSSQNIFIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180
           ANLVCG       + +G+IGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA
Sbjct: 121 ANLVCG-------LCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180

Query: 181 QATWPAKAV 190
           QATWPAKAV
Sbjct: 181 QATWPAKAV 182

[Close]

BLAST of HG10013568 vs. NCBI nr
Match: KAG7031779.1 (V-type proton ATPase subunit c''1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 299.7 bits (766), Expect = 1.8e-77
Identity = 170/189 (89.95%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MSASNMAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVP 60
           MS SNMA  L SWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIK P
Sbjct: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV AS+IYAPESLRAGYSIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGF 120

Query: 121 ANLVCGFDPSSQNIFIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180
           ANLVCG       + +G+IGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA
Sbjct: 121 ANLVCG-------LCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180

Query: 181 QATWPAKAV 190
           QATWP KAV
Sbjct: 181 QATWPTKAV 182

[Close]

BLAST of HG10013568 vs. NCBI nr
Match: KAG6608142.1 (V-type proton ATPase subunit c''1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 298.9 bits (764), Expect = 3.1e-77
Identity = 169/189 (89.42%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MSASNMAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVP 60
           MS SNMA  L SWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIY+TGSSLIGAAIK P
Sbjct: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYLTGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV AS+IYAPESLRAGYSIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGF 120

Query: 121 ANLVCGFDPSSQNIFIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180
           ANLVCG       + +G+IGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA
Sbjct: 121 ANLVCG-------LCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180

Query: 181 QATWPAKAV 190
           QATWP KAV
Sbjct: 181 QATWPTKAV 182

[Close]

BLAST of HG10013568 vs. ExPASy Swiss-Prot
Match: Q9SLA2 (V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE=1 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.1e-72
Identity = 154/184 (83.70%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 4   SNMAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVPRIT 63
           S +A   SSW  ALVRISPYTFSA+GIAI+IGVSVLGAAWGIYITGSSLIGAAI+ PRIT
Sbjct: 2   SGVAIHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRIT 61

Query: 64  SKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGFANL 123
           SKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGY+IFASGIIVGFANL
Sbjct: 62  SKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANL 121

Query: 124 VCGFDPSSQNIFIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQAT 183
           VCG       + +GIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQAT
Sbjct: 122 VCG-------LCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQAT 178

Query: 184 WPAK 188
           WP K
Sbjct: 182 WPTK 178

[Close]

BLAST of HG10013568 vs. ExPASy Swiss-Prot
Match: Q9SZY7 (V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE=1 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 6.9e-72
Identity = 152/177 (85.88%), Postives = 162/177 (91.53%), Query Frame = 0


Query: 11  SSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVPRITSKNLISV 70
           SSW  ALVRISPYTFSA+GIAI+IGVSVLGAAWGIYITGSSLIGAAI+ PRITSKNLISV
Sbjct: 11  SSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISV 70

Query: 71  IFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGFANLVCGFDPS 130
           IFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGY+IFASGIIVGFANLVCG    
Sbjct: 71  IFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCG---- 130

Query: 131 SQNIFIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 188
              + +GIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQATWP K
Sbjct: 131 ---LCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

[Close]

BLAST of HG10013568 vs. ExPASy Swiss-Prot
Match: P23968 (V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VMA16 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 8.0e-44
Identity = 94/167 (56.29%), Postives = 132/167 (79.04%), Query Frame = 0


Query: 17  LVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVPRITSKNLISVIFCEAV 76
           L+R SPY ++ +GIA+ +G+SV+GAAWGI+ITGSS+IGA ++ PRIT+KNLIS+IFCE V
Sbjct: 51  LLRTSPYMWANLGIALCVGLSVVGAAWGIFITGSSMIGAGVRAPRITTKNLISIIFCEVV 110

Query: 77  AIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGFANLVCGFDPSSQNIFI 136
           AIYG+I+AI+  +KL   +A  +Y+  +L  GYS+F +GI VG +NL+CG       I +
Sbjct: 111 AIYGLIIAIVFSSKLTVATAENMYSKSNLYTGYSLFWAGITVGASNLICG-------IAV 170

Query: 137 GIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQAT 184
           GI G++ A+SDA +S+LFVKILVIEIFGS LGL G+IVG++M+ +A+
Sbjct: 171 GITGATAAISDAADSALFVKILVIEIFGSILGLLGLIVGLLMAGKAS 210

[Close]

BLAST of HG10013568 vs. ExPASy Swiss-Prot
Match: Q91V37 (V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6v0b PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.8e-41
Identity = 92/167 (55.09%), Postives = 125/167 (74.85%), Query Frame = 0


Query: 17  LVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVPRITSKNLISVIFCEAV 76
           L   SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +K PRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 77  AIYGVIVAIILQTKLESVSASQIYA--PESLRAGYSIFASGIIVGFANLVCGFDPSSQNI 136
           AIYG+I+AI++    E  SA++  A    +  AGYS+F +G+ VG +NL CG       +
Sbjct: 101 AIYGIIMAIVISNMAEPFSATEPKAIGHRNYHAGYSMFGAGLTVGLSNLFCG-------V 160

Query: 137 FIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 182
            +GI+GS  AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 CVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

[Close]

BLAST of HG10013568 vs. ExPASy Swiss-Prot
Match: Q2TA24 (V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 8.3e-41
Identity = 91/167 (54.49%), Postives = 124/167 (74.25%), Query Frame = 0


Query: 17  LVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVPRITSKNLISVIFCEAV 76
           L   SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +K PRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 77  AIYGVIVAIILQTKLESVSAS--QIYAPESLRAGYSIFASGIIVGFANLVCGFDPSSQNI 136
           AIYG+I+AI++    E  SA+  +     +  AGYS+F +G+ VG +NL CG       +
Sbjct: 101 AIYGIIMAIVISNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCG-------V 160

Query: 137 FIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 182
            +GI+GS  AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 CVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

[Close]

BLAST of HG10013568 vs. ExPASy TrEMBL
Match: A0A6J1ITC9 (V-type proton ATPase subunit c''2 OS=Cucurbita maxima OX=3661 GN=LOC111480416 PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.9e-78
Identity = 170/189 (89.95%), Postives = 175/189 (92.59%), Query Frame = 0


Query: 1   MSASNMAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVP 60
           MS SNMA  L SWSHALVRISPYTFSAVGIAIAIG+SVLGAAWGIYITGSSLIGAAIK P
Sbjct: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGISVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV AS+IYAPESLRAGYSIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGF 120

Query: 121 ANLVCGFDPSSQNIFIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180
           ANLVCG       + +G+IGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA
Sbjct: 121 ANLVCG-------LCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180

Query: 181 QATWPAKAV 190
           QATWPAKAV
Sbjct: 181 QATWPAKAV 182

[Close]

BLAST of HG10013568 vs. ExPASy TrEMBL
Match: A0A6J1FPR0 (V-type proton ATPase subunit c''2 OS=Cucurbita moschata OX=3662 GN=LOC111445862 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77
Identity = 169/189 (89.42%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MSASNMAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVP 60
           MS SNMA  L SWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIK P
Sbjct: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKL+SV AS+IYAPESLRAGYSIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGF 120

Query: 121 ANLVCGFDPSSQNIFIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180
           ANLVCG       + +G+IGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA
Sbjct: 121 ANLVCG-------LCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180

Query: 181 QATWPAKAV 190
           QATWP KAV
Sbjct: 181 QATWPTKAV 182

[Close]

BLAST of HG10013568 vs. ExPASy TrEMBL
Match: A0A6J1BST1 (V-type proton ATPase subunit c''2-like OS=Momordica charantia OX=3673 GN=LOC111005387 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.2e-76
Identity = 168/189 (88.89%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MSASNMAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVP 60
           MS S MAA L SWS A+VRISPYTFSAVGIA+AIGVSVLGAAWGIYITGSSLIGAAIK P
Sbjct: 1   MSGSIMAADLRSWSRAIVRISPYTFSAVGIALAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGY+IF+SG IVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFSSGSIVGF 120

Query: 121 ANLVCGFDPSSQNIFIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180
           ANLVCG       + +GIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA
Sbjct: 121 ANLVCG-------VCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180

Query: 181 QATWPAKAV 190
           QATWPAKAV
Sbjct: 181 QATWPAKAV 182

[Close]

BLAST of HG10013568 vs. ExPASy TrEMBL
Match: A0A0A0LGQ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878880 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.4e-75
Identity = 165/184 (89.67%), Postives = 170/184 (92.39%), Query Frame = 0


Query: 6   MAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVPRITSK 65
           MAASLSSWSHALVRISPYTFSAVGIAI+IGVSVLGAAWGIYITGSSLIGAAIK PRITSK
Sbjct: 1   MAASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK 60

Query: 66  NLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGFANLVC 125
           NLISVIFCEAVAIYGVIVAIILQTKLESV ASQIY PESL AGYSIFASGIIVGF+NL C
Sbjct: 61  NLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFC 120

Query: 126 GFDPSSQNIFIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWP 185
           G       + +GIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWP
Sbjct: 121 G-------LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWP 177

Query: 186 AKAV 190
           AK +
Sbjct: 181 AKPI 177

[Close]

BLAST of HG10013568 vs. ExPASy TrEMBL
Match: A0A2P5CA56 (V-ATPase proteolipid subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_170290 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.8e-75
Identity = 167/189 (88.36%), Postives = 173/189 (91.53%), Query Frame = 0


Query: 1   MSASNMAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVP 60
           MS S + A+ SSWS ALVRISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIK P
Sbjct: 1   MSGSAVVAASSSWSSALVRISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV ASQIYAPESLRAGY+IFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGFDPSSQNIFIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180
           ANLVCG       + +GIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA
Sbjct: 121 ANLVCG-------LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 180

Query: 181 QATWPAKAV 190
           QATWPA AV
Sbjct: 181 QATWPATAV 182

[Close]

BLAST of HG10013568 vs. TAIR 10
Match: AT2G25610.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 272.7 bits (696), Expect = 2.2e-73
Identity = 154/184 (83.70%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 4   SNMAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVPRIT 63
           S +A   SSW  ALVRISPYTFSA+GIAI+IGVSVLGAAWGIYITGSSLIGAAI+ PRIT
Sbjct: 2   SGVAIHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRIT 61

Query: 64  SKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGFANL 123
           SKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGY+IFASGIIVGFANL
Sbjct: 62  SKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANL 121

Query: 124 VCGFDPSSQNIFIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQAT 183
           VCG       + +GIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQAT
Sbjct: 122 VCG-------LCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQAT 178

Query: 184 WPAK 188
           WP K
Sbjct: 182 WPTK 178

[Close]

BLAST of HG10013568 vs. TAIR 10
Match: AT4G32530.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 271.6 bits (693), Expect = 4.9e-73
Identity = 152/177 (85.88%), Postives = 162/177 (91.53%), Query Frame = 0


Query: 11  SSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVPRITSKNLISV 70
           SSW  ALVRISPYTFSA+GIAI+IGVSVLGAAWGIYITGSSLIGAAI+ PRITSKNLISV
Sbjct: 11  SSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISV 70

Query: 71  IFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGFANLVCGFDPS 130
           IFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGY+IFASGIIVGFANLVCG    
Sbjct: 71  IFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCG---- 130

Query: 131 SQNIFIGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 188
              + +GIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQATWP K
Sbjct: 131 ---LCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

[Close]

BLAST of HG10013568 vs. TAIR 10
Match: AT4G32530.2 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 264.2 bits (674), Expect = 7.9e-71
Identity = 153/200 (76.50%), Postives = 164/200 (82.00%), Query Frame = 0


Query: 11  SSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVPRITSKNLISV 70
           SSW  ALVRISPYTFSA+GIAI+IGVSVLGAAWGIYITGSSLIGAAI+ PRITSKNLISV
Sbjct: 11  SSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISV 70

Query: 71  IFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYSIFASGIIVGFANLVCGFDPS 130
           IFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGY+IFASGIIVGFANLVCG   +
Sbjct: 71  IFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGSVST 130

Query: 131 -----------------------SQNIFIGIIGSSCALSDAQNSSLFVKILVIEIFGSAL 188
                                  S  + +GIIGSSCALSDAQNS+LFVKILVIEIFGSAL
Sbjct: 131 LFSFLTVLVFGFHCQICNRGPHFSCRLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSAL 190

[Close]

BLAST of HG10013568 vs. TAIR 10
Match: AT1G75630.1 (vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 )

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-13
Identity = 53/158 (33.54%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 25  FSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVPRITSKNLISVIFCEAVAIYGVIVA 84
           F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 15  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 74

Query: 85  IILQTKLESVSASQIYAPESLRAGYSIFASGIIVGFANLVCGFDPSSQNIFIGIIGSSCA 144
           +I+ T +   + S       L  GY+  +SG+  G A L  G       + IGI+G +  
Sbjct: 75  VIISTGINPKAKSYY-----LFDGYAHLSSGLACGLAGLSAG-------MAIGIVGDAGV 134

Query: 145 LSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQA 183
            ++AQ   LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 135 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 160

[Close]

BLAST of HG10013568 vs. TAIR 10
Match: AT1G19910.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-13
Identity = 53/158 (33.54%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 25  FSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKVPRITSKNLISVIFCEAVAIYGVIVA 84
           F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 14  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 73

Query: 85  IILQTKLESVSASQIYAPESLRAGYSIFASGIIVGFANLVCGFDPSSQNIFIGIIGSSCA 144
           +I+ T +   + S       L  GY+  +SG+  G A L  G       + IGI+G +  
Sbjct: 74  VIISTGINPKAKSYY-----LFDGYAHLSSGLACGLAGLSAG-------MAIGIVGDAGV 133

Query: 145 LSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQA 183
            ++AQ   LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 134 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 159

The following BLAST results are available for this feature:

BLAST of HG10013568 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898797.1	4.3e-79	92.06	V-type proton ATPase subunit c''2 isoform X2 [Benincasa hispida]	[more]
XP_023523441.1	6.2e-78	90.48	V-type proton ATPase subunit c''2 [Cucurbita pepo subsp. pepo]	[more]
XP_022981207.1	8.1e-78	89.95	V-type proton ATPase subunit c''2 [Cucurbita maxima]	[more]
KAG7031779.1	1.8e-77	89.95	V-type proton ATPase subunit c''1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6608142.1	3.1e-77	89.42	V-type proton ATPase subunit c''1, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of HG10013568 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLA2	3.1e-72	83.70	V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE...	[more]
Q9SZY7	6.9e-72	85.88	V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE...	[more]
P23968	8.0e-44	56.29	V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508...	[more]
Q91V37	4.8e-41	55.09	V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6...	[more]
Q2TA24	8.3e-41	54.49	V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B...	[more]

BLAST of HG10013568 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ITC9	3.9e-78	89.95	V-type proton ATPase subunit c''2 OS=Cucurbita maxima OX=3661 GN=LOC111480416 PE...	[more]
A0A6J1FPR0	2.0e-77	89.42	V-type proton ATPase subunit c''2 OS=Cucurbita moschata OX=3662 GN=LOC111445862 ...	[more]
A0A6J1BST1	2.2e-76	88.89	V-type proton ATPase subunit c''2-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0LGQ0	1.4e-75	89.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878880 PE=3 SV=1	[more]
A0A2P5CA56	1.8e-75	88.36	V-ATPase proteolipid subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_1702...	[more]

BLAST of HG10013568 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25610.1	2.2e-73	83.70	ATPase, F0/V0 complex, subunit C protein	[more]
AT4G32530.1	4.9e-73	85.88	ATPase, F0/V0 complex, subunit C protein	[more]
AT4G32530.2	7.9e-71	76.50	ATPase, F0/V0 complex, subunit C protein	[more]
AT1G75630.1	1.2e-13	33.54	vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4	[more]
AT1G19910.1	1.2e-13	33.54	ATPase, F0/V0 complex, subunit C protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000245	V-ATPase proteolipid subunit	PRINTS	PR00122	VACATPASE	coord: 66..89 score: 46.93 coord: 39..65 score: 25.73
None	No IPR available	GENE3D	1.20.120.610		coord: 23..185 e-value: 9.1E-48 score: 163.7
None	No IPR available	PANTHER	PTHR10263	V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT	coord: 6..186
None	No IPR available	PANTHER	PTHR10263:SF56	V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT	coord: 6..186
None	No IPR available	CDD	cd18177	ATP-synt_Vo_c_ATP6F_rpt1	coord: 25..87 e-value: 2.92722E-26 score: 93.4811
None	No IPR available	CDD	cd18178	ATP-synt_Vo_c_ATP6F_rpt2	coord: 107..178 e-value: 2.80701E-21 score: 80.6287
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 112..178 e-value: 1.1E-8 score: 35.2 coord: 29..87 e-value: 2.5E-14 score: 53.3
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 21..90
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 104..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013568.1	HG10013568.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
molecular_function	GO:0015078	proton transmembrane transporter activity