HG10013486 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013486
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	cryptochrome-1
Location	Chr02: 1953854 .. 1957643 (-)
RNA-Seq Expression	HG10013486
Synteny	HG10013486

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGTGGCGGTTGCAGCATAGTTTGGTTCAGAAGAGATCTCAGGGTTGAAGATAACCCAGCTCTTACCGCCGCCGTCAGGGCTGGCGCCGTCGTCGCCGTCTTCATCTGGGCTCCGGAGGAAGAGGGTCACTATTATCCCGGTAGGGTCTCCCGATGGTGGCTCAAACAGAGCTTAGCCCATCTTGATTCCTCTCTTAGAAGCCTTGGTACTTTTCTTCTCACTAAGAGATCCACCAACACCATTTCTGCTTTGCTTGACGTCGTTAAAGCCACTGGTGCTTCTCAACTCTTCTTCAATCACTTATACGGTCTGTTTTTCTTCTTCAATTGCAAACCCCTTCTTTAATTTCTCTGCTTTTCTTCTTTCTTTCTCTGTAATTGAAGTTTGTTTCCTATCACCCTTTTCTAGAATTGATTTGTTTGTGTTGTGGTCAGTGTATGATGTTCTTGGATGTGCTTGGAATAATTTGTATAGTGATCTAATTTTTCTTCCGTTTTGTAGGTTTTTTAATGATGAAGATATTTTGTTGATGTGTGTGTGGCATTATACTGAGATTTTTATTCATCTGCTTGTCAATTGTTATTAATTACTGGGCGAAGTCTGCTTATTATTGATATAAATTGTCTTCTCGGACTACTACTGTAAGTCTGTAAGTGTTCGAGTTTTCATAGAATTGGAAAGAGTGGTTCCTAAATGATTGTGATGTGAATAGATTCTCCCCTTTAGAATTGGTATCTTATGGAATTTTCTTTGATGTCTTGATAATGATTTGGAAATACATATCTTATGAAAGCAAATCTGTTTGTCAGATCCTTTGTCGCTCATTCGGGATCATCGAGCGAAGGAGGTTTTATCTGCTCAAGGCATAGGTGTGAGGTCCTACAATGCGGATTTACTGTACGAACCATGGGATGTTAAGGATGCCAACGGCAATCCATTTACTACCTTTGCTGGTTTCTGGGAGAGATGTCTCAGCATGCCTTGTGATCCAGAGGCACCACTACTCCCACCTAAGAGAATAATTTCAGGTTGCTTTTCTAAAATTTAGTTGAACAAGTCTTGTGTTTACTTCATTTTTTTTTCTTATCATGTATTTGATTGATCACTAACACTCTCTAGTTGTTGTGTTTGTTTGTTTGTTTGTTCTACATGATGGTTTTCGCTAGAGAGAACACTTTCTAATTGTGATTCTCAAATATTTGTTCATCCATTTTAGTTTCAGTCAATGCTGTGAAGTTTGAAGTGTTATAAAGCTGGTCCTTGTTCTTTCTAATATATCAAGTGTGTTTTGGGTACCGCGAAGTAGCATAGTTGGTTTCATTAGTCTAAGCTTCTTCTCCTTTCACATAATTGGTGGAAAACAGAGACAATTATACTTCCCACACATGATTTTACACTCTTATATGACTATATGAGAGAGTCCGGCCATCCTACTTTAATGTTATTTGCTTCTGGTTAGATTAATAAGAAAGTAGTATCACTTGTTACATGTTTAGATGGCTTGTTCCAGCTTATTATTAGGTTGGTGCATAAACATAGAATAGCATTTGAGAACACTGGCCTTGCTGAAATTTAGCTGTCTGATTGAGAAAACAAATAGCCAATGGAGAGAGGTGCTAGGCCTATGCAATTCTGTTGTCAAGAGATCTTAAATCTAGAGTCATCAAACTACTTTTCAGGTTTATGTTCGCTTATAGAGTACTTATCCTTCTAAGAGATGGTTACTTGCAAACTAGTAGACCATGAAAAGGAGGTTTCTTCTGATGTAGATGGGCTTGCCGTGGAAATAAACCATTGCATATTTTCACATTTGAAGTATGTGCTTGCTGTTCATTCATTGTTTCTCTTTTATCTAAATGGAAAGCTACTTGGGAATGAAGCATTTTGTGGGAACTTTAACTTCCTCCCCATATATTGCCTCTATCTCTTCTATCGAAGGCATGTACTGTTTTTGAACATCATCTGTCTTAAAAGATTCACTCTACATATTGTGCTTGCTCCTTCAGGTGATGCATCTAGGTGCCCATGTGACACGTTGGTATTTGAAGATGAATCTGAGAAGGGAAGCAATGCGCTTCTCGCCCGAGCATGGTCTCCTGGATGGAGCAACGCAGATAAAGCTTTGACCACGTTCATCAATGGACCATTACTTGAATACTCAAAAAATCGTAGGAAGGCGGATAGTGCAACCACCTCGTTTCTGTCTCCCCACTTGCATTTTGGAGAGGTGAGTGTGAGAAAAGTGTTTCATCTTGTTCGAATGAAGCAGGTTTTATGGGCCAATGAAGGAAACAAGGCCGGCGATGAGAGTGTCAACTTGTTTCTCAAGTCTATTGGACTCAGAGAATATTCCAGATACATGAGTTTCAACCATCCTTACAGTCATGAAAGGCCTCTTCTTGGGCATCTTAAATTCTTTCCCTGGGTTGTGGGTGAAGGCTATTTTAAGGCATGGAGGCAAGGAAGGACTGGTTATCCATTAGTGGATGCTGGTATGAGGGAATTGTGGGCTACGGGGTGGCTGCATGATCGGATTCGAGTTGTCGTTTCTAGTTTCTTTGTGAAGGTTCTGCAGCTTCCTTGGAGATGGGGAATGAAGTATTTCTGGGATACTCTCTTGGATGCAGACCTCGAGAGTGATGCGCTTGGTTGGCAATACATATCTGGCACACTTCCCGATGGCCGTGAATTTGATCGCATTGACAATCCACAGGTGCACACACCTTTAGAGTTCTTCCTCAAAATTTCACATCTATCCTCTGAATTTATCTAAAAGTTGACATCTTCCTACTCCTTGCTTGTGCAAAGAGGTTTCTTATTGAGGGTTTTAGAAATGAAAATTTCCAAAAAACGGGTTTATTTTATAGCTGCAACTCTATCCTCTGCAATTGACTAGACTTGAGTCCTCAATTTGCTTGCTCATGCTCTTGTATGACGTGTTTCTGGATGAAATTATCTGTACTAATTGTTGGTTTTCTACAGCTGGAGGGTTATAAATTCGCCCCAAATGGAGAATATGTCCGGAGATGGCTTCCTGAACTTTCTAGATTGCCCACTGAATGGATTCATCACCCATGGAATGCACCTGAATCTGTGCTCCAAGCTGCTGGGATTGAGCTTGGATCAAACTACCCTCTTCCCATCGTAGGACTGGATGCAGCTAAAGCTAGGTTGGAAGAAGCGCTGTCCGAGATGTGGCAACAAGAAGCGGCTTCAAGGGCTGCAATTGAGAATGGAACTGAAGAGGGACTCGGGGACTCTTCTGAGTCGATCCCAATTGCATTTCCTCAAGACATAGCAATGGAGGAGGAAGACCTTGAGCCTGCAAGGATGAACGCTCATACAGTTCGGTGCTACGAGGATCAGATGGTCCCGAGCATGACTAGTTCGGTGAGATTAGAAGATGAACCTTCTTTAAATATTCAAAGTACGCAGAGGGCAGAGAAAAGTACCTACAAATGCAAATCTACTCCAAGAGCCCACCAGAGATGCAGTAAACCCAAGAGTTCTGCCAACTGCTCCGACACAGACTCGACGCCCCTATACCGCAGGTATAGCCCTAAGAACTTCTGTTGAAGACTCCACTGCCGAGTCTTCTTCCAGTAGTGATGTTAGAAGAGAGAGAGATGGAGGTGTGGTTCCGGTTTGGTCTCCACCAAGTTCAAGTTACACGGAGCAGTTTGTGGTTGATGAAAATGGCATCGGAACAAGCTCTTCGTTCTTGCAGGGGCATCAACAGACTCATCAAATAATCAATTGGAGGCGGCTATCTCAGACTGGGTAA

mRNA sequence

ATGTCAGGTGGCGGTTGCAGCATAGTTTGGTTCAGAAGAGATCTCAGGGTTGAAGATAACCCAGCTCTTACCGCCGCCGTCAGGGCTGGCGCCGTCGTCGCCGTCTTCATCTGGGCTCCGGAGGAAGAGGGTCACTATTATCCCGGTAGGGTCTCCCGATGGTGGCTCAAACAGAGCTTAGCCCATCTTGATTCCTCTCTTAGAAGCCTTGGTACTTTTCTTCTCACTAAGAGATCCACCAACACCATTTCTGCTTTGCTTGACGTCGTTAAAGCCACTGGTGCTTCTCAACTCTTCTTCAATCACTTATACGATCCTTTGTCGCTCATTCGGGATCATCGAGCGAAGGAGGTTTTATCTGCTCAAGGCATAGGTGTGAGGTCCTACAATGCGGATTTACTGTACGAACCATGGGATGTTAAGGATGCCAACGGCAATCCATTTACTACCTTTGCTGGTTTCTGGGAGAGATGTCTCAGCATGCCTTGTGATCCAGAGGCACCACTACTCCCACCTAAGAGAATAATTTCAGGTGATGCATCTAGGTGCCCATGTGACACGTTGGTATTTGAAGATGAATCTGAGAAGGGAAGCAATGCGCTTCTCGCCCGAGCATGGTCTCCTGGATGGAGCAACGCAGATAAAGCTTTGACCACGTTCATCAATGGACCATTACTTGAATACTCAAAAAATCGTAGGAAGGCGGATAGTGCAACCACCTCGTTTCTGTCTCCCCACTTGCATTTTGGAGAGGTGAGTGTGAGAAAAGTGTTTCATCTTGTTCGAATGAAGCAGGTTTTATGGGCCAATGAAGGAAACAAGGCCGGCGATGAGAGTGTCAACTTGTTTCTCAAGTCTATTGGACTCAGAGAATATTCCAGATACATGAGTTTCAACCATCCTTACAGTCATGAAAGGCCTCTTCTTGGGCATCTTAAATTCTTTCCCTGGGTTGTGGGTGAAGGCTATTTTAAGGCATGGAGGCAAGGAAGGACTGGTTATCCATTAGTGGATGCTGGTATGAGGGAATTGTGGGCTACGGGGTGGCTGCATGATCGGATTCGAGTTGTCGTTTCTAGTTTCTTTGTGAAGGTTCTGCAGCTTCCTTGGAGATGGGGAATGAAGTATTTCTGGGATACTCTCTTGGATGCAGACCTCGAGAGTGATGCGCTTGGTTGGCAATACATATCTGGCACACTTCCCGATGGCCGTGAATTTGATCGCATTGACAATCCACAGCTGGAGGGTTATAAATTCGCCCCAAATGGAGAATATGTCCGGAGATGGCTTCCTGAACTTTCTAGATTGCCCACTGAATGGATTCATCACCCATGGAATGCACCTGAATCTGTGCTCCAAGCTGCTGGGATTGAGCTTGGATCAAACTACCCTCTTCCCATCGTAGGACTGGATGCAGCTAAAGCTAGGTTGGAAGAAGCGCTGTCCGAGATGTGGCAACAAGAAGCGGCTTCAAGGGCTGCAATTGAGAATGGAACTGAAGAGGGACTCGGGGACTCTTCTGAGTCGATCCCAATTGCATTTCCTCAAGACATAGCAATGGAGGAGGAAGACCTTGAGCCTGCAAGGATGAACGCTCATACAGTTCGGTGCTACGAGGATCAGATGGTCCCGAGCATGACTAGTTCGACTCGACGCCCCTATACCGCAGGTATAGCCCTAAGAACTTCTGTTGAAGACTCCACTGCCGAGTCTTCTTCCAGTAGTGATGTTAGAAGAGAGAGAGATGGAGGTGTGGTTCCGGTTTGGTCTCCACCAAGTTCAAGTTACACGGAGCAGTTTGTGGTTGATGAAAATGGCATCGGAACAAGCTCTTCGTTCTTGCAGGGGCATCAACAGACTCATCAAATAATCAATTGGAGGCGGCTATCTCAGACTGGGTAA

Coding sequence (CDS)

ATGTCAGGTGGCGGTTGCAGCATAGTTTGGTTCAGAAGAGATCTCAGGGTTGAAGATAACCCAGCTCTTACCGCCGCCGTCAGGGCTGGCGCCGTCGTCGCCGTCTTCATCTGGGCTCCGGAGGAAGAGGGTCACTATTATCCCGGTAGGGTCTCCCGATGGTGGCTCAAACAGAGCTTAGCCCATCTTGATTCCTCTCTTAGAAGCCTTGGTACTTTTCTTCTCACTAAGAGATCCACCAACACCATTTCTGCTTTGCTTGACGTCGTTAAAGCCACTGGTGCTTCTCAACTCTTCTTCAATCACTTATACGATCCTTTGTCGCTCATTCGGGATCATCGAGCGAAGGAGGTTTTATCTGCTCAAGGCATAGGTGTGAGGTCCTACAATGCGGATTTACTGTACGAACCATGGGATGTTAAGGATGCCAACGGCAATCCATTTACTACCTTTGCTGGTTTCTGGGAGAGATGTCTCAGCATGCCTTGTGATCCAGAGGCACCACTACTCCCACCTAAGAGAATAATTTCAGGTGATGCATCTAGGTGCCCATGTGACACGTTGGTATTTGAAGATGAATCTGAGAAGGGAAGCAATGCGCTTCTCGCCCGAGCATGGTCTCCTGGATGGAGCAACGCAGATAAAGCTTTGACCACGTTCATCAATGGACCATTACTTGAATACTCAAAAAATCGTAGGAAGGCGGATAGTGCAACCACCTCGTTTCTGTCTCCCCACTTGCATTTTGGAGAGGTGAGTGTGAGAAAAGTGTTTCATCTTGTTCGAATGAAGCAGGTTTTATGGGCCAATGAAGGAAACAAGGCCGGCGATGAGAGTGTCAACTTGTTTCTCAAGTCTATTGGACTCAGAGAATATTCCAGATACATGAGTTTCAACCATCCTTACAGTCATGAAAGGCCTCTTCTTGGGCATCTTAAATTCTTTCCCTGGGTTGTGGGTGAAGGCTATTTTAAGGCATGGAGGCAAGGAAGGACTGGTTATCCATTAGTGGATGCTGGTATGAGGGAATTGTGGGCTACGGGGTGGCTGCATGATCGGATTCGAGTTGTCGTTTCTAGTTTCTTTGTGAAGGTTCTGCAGCTTCCTTGGAGATGGGGAATGAAGTATTTCTGGGATACTCTCTTGGATGCAGACCTCGAGAGTGATGCGCTTGGTTGGCAATACATATCTGGCACACTTCCCGATGGCCGTGAATTTGATCGCATTGACAATCCACAGCTGGAGGGTTATAAATTCGCCCCAAATGGAGAATATGTCCGGAGATGGCTTCCTGAACTTTCTAGATTGCCCACTGAATGGATTCATCACCCATGGAATGCACCTGAATCTGTGCTCCAAGCTGCTGGGATTGAGCTTGGATCAAACTACCCTCTTCCCATCGTAGGACTGGATGCAGCTAAAGCTAGGTTGGAAGAAGCGCTGTCCGAGATGTGGCAACAAGAAGCGGCTTCAAGGGCTGCAATTGAGAATGGAACTGAAGAGGGACTCGGGGACTCTTCTGAGTCGATCCCAATTGCATTTCCTCAAGACATAGCAATGGAGGAGGAAGACCTTGAGCCTGCAAGGATGAACGCTCATACAGTTCGGTGCTACGAGGATCAGATGGTCCCGAGCATGACTAGTTCGACTCGACGCCCCTATACCGCAGGTATAGCCCTAAGAACTTCTGTTGAAGACTCCACTGCCGAGTCTTCTTCCAGTAGTGATGTTAGAAGAGAGAGAGATGGAGGTGTGGTTCCGGTTTGGTCTCCACCAAGTTCAAGTTACACGGAGCAGTTTGTGGTTGATGAAAATGGCATCGGAACAAGCTCTTCGTTCTTGCAGGGGCATCAACAGACTCATCAAATAATCAATTGGAGGCGGCTATCTCAGACTGGGTAA

Protein sequence

MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDASRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYKFAPNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYEDQMVPSMTSSTRRPYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQIINWRRLSQTG

Homology

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BLAST of HG10013486 vs. NCBI nr
Match: XP_038897472.1 (cryptochrome-1 isoform X1 [Benincasa hispida] >XP_038897473.1 cryptochrome-1 isoform X2 [Benincasa hispida])

HSP 1 Score: 1275.4 bits (3299), Expect = 0.0e+00
Identity = 625/681 (91.78%), Postives = 628/681 (92.22%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGAS LFFNHLYDPLSLIRDHRAKEVLS
Sbjct: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASHLFFNHLYDPLSLIRDHRAKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA
Sbjct: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180

Query: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240
           SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT
Sbjct: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240

Query: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFNH 300
           SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAG+ESVNLFLKSIGLREYSRYMSFNH
Sbjct: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH 300

Query: 301 PYSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
           PYSHERPLLGHLKFFPWVV EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
Sbjct: 301 PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360

Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYKFA 420
           FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPD REFDRIDNPQLEGYKF 
Sbjct: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420

Query: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480
           PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPI+GLDAAKARLEEA
Sbjct: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIIGLDAAKARLEEA 480

Query: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYED 540
           LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPAR+NAHTVRCYED
Sbjct: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARINAHTVRCYED 540

Query: 541 QMVPSMTSS------------------------------------------------TRR 600
           QMVPSMTSS                                                TR 
Sbjct: 541 QMVPSMTSSVRLEDEPSLNIQSTAEDGRAEVPTNANLPQEPTRDAVNPRALPTAPTQTRH 600

Query: 601 PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS 634
           PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS
Sbjct: 601 PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS 660

[Close]

BLAST of HG10013486 vs. NCBI nr
Match: XP_004136290.1 (cryptochrome-1 isoform X2 [Cucumis sativus] >XP_011652550.1 cryptochrome-1 isoform X1 [Cucumis sativus])

HSP 1 Score: 1267.3 bits (3278), Expect = 0.0e+00
Identity = 619/681 (90.90%), Postives = 625/681 (91.78%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLR+EDNPALTAAVRAGAVV VFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRIEDNPALTAAVRAGAVVVVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLGT+LLTKRSTNTISALLDV KATGAS LFFNHLYDPLSLIRDHR KEVLS
Sbjct: 61  AHLDSSLRSLGTYLLTKRSTNTISALLDVFKATGASHLFFNHLYDPLSLIRDHRVKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGI VRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA
Sbjct: 121 AQGIRVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180

Query: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240
           SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT
Sbjct: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240

Query: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFNH 300
           SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAG+ESVNLFLKSIGLREYSRYMSFNH
Sbjct: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH 300

Query: 301 PYSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
           PYSHERPLLGHLKFFPWVV EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
Sbjct: 301 PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360

Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYKFA 420
           FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPD REFDRIDNPQLEGYKF 
Sbjct: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420

Query: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480
           PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAG+ELGSNYPLPIVGLDAAKARLEEA
Sbjct: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGVELGSNYPLPIVGLDAAKARLEEA 480

Query: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYED 540
           LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAM+EED+EPARMNAHTVRCYED
Sbjct: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMDEEDIEPARMNAHTVRCYED 540

Query: 541 QMVPSMTSS------------------------------------------------TRR 600
           QMVPSMTSS                                                TRR
Sbjct: 541 QMVPSMTSSVRLEDESSLNIQSTAEDGRAEVPTNANLPQEPARDAVNPRAMPTAPTQTRR 600

Query: 601 PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS 634
           PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS
Sbjct: 601 PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS 660

[Close]

BLAST of HG10013486 vs. NCBI nr
Match: XP_008466232.1 (PREDICTED: cryptochrome-1 isoform X1 [Cucumis melo] >XP_008466233.1 PREDICTED: cryptochrome-1 isoform X2 [Cucumis melo] >KAA0038710.1 cryptochrome-1 isoform X1 [Cucumis melo var. makuwa] >TYK31322.1 cryptochrome-1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1265.8 bits (3274), Expect = 0.0e+00
Identity = 619/681 (90.90%), Postives = 625/681 (91.78%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLR+EDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRIEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLGTFLLTKRSTNTISALLDV KATGAS LFFNHLYDPLSLIRDHR KEVLS
Sbjct: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVFKATGASHLFFNHLYDPLSLIRDHRVKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGI VRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRI+SGDA
Sbjct: 121 AQGIRVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIVSGDA 180

Query: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240
           SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT
Sbjct: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240

Query: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFNH 300
           SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAG+ESVNLFLKSIGLREYSRYMSFNH
Sbjct: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH 300

Query: 301 PYSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
           PYSHERPLLGHLKFFPWVV EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
Sbjct: 301 PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360

Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYKFA 420
           FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPD REFDRIDNPQLEGYKF 
Sbjct: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420

Query: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480
           PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA
Sbjct: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480

Query: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYED 540
           LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAM+EED+EPAR+NAHTVRCYED
Sbjct: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMDEEDIEPARVNAHTVRCYED 540

Query: 541 QMVPSMTSS------------------------------------------------TRR 600
           QMVPSMTSS                                                TR 
Sbjct: 541 QMVPSMTSSVRLEDESSLNIQSTAEDGRAEVPTNANLPQEPARDAVNPRAMPTAPTQTRL 600

Query: 601 PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS 634
           PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS
Sbjct: 601 PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS 660

[Close]

BLAST of HG10013486 vs. NCBI nr
Match: KAG6591664.1 (Cryptochrome-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1240.3 bits (3208), Expect = 0.0e+00
Identity = 608/682 (89.15%), Postives = 620/682 (90.91%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLRVEDNPALTAAVR+GAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRSGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           A LDSSLRSLGTFL+TKRSTNTISALLDVVKATGASQLFFNHLYDPLSL+RDHRAKEVLS
Sbjct: 61  ALLDSSLRSLGTFLVTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLVRDHRAKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA
Sbjct: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180

Query: 181 S-RCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSAT 240
           S RCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPL+EYSKNRRKADSAT
Sbjct: 181 SRRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSAT 240

Query: 241 TSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFN 300
           TSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN+AG+ESVNLFLKSIGLREYSRYMSFN
Sbjct: 241 TSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEAGEESVNLFLKSIGLREYSRYMSFN 300

Query: 301 HPYSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS 360
           HPYSHERPLLGHLKFFPWVV EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS
Sbjct: 301 HPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS 360

Query: 361 SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYKF 420
           SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPD REFDRIDNPQLEGYK 
Sbjct: 361 SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKC 420

Query: 421 APNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEE 480
            P GEYVRRWLPELSRLPTEWIHHPWNAPE VLQAAGIELGSNYPLPIVGLDAAKARLEE
Sbjct: 421 DPYGEYVRRWLPELSRLPTEWIHHPWNAPEYVLQAAGIELGSNYPLPIVGLDAAKARLEE 480

Query: 481 ALSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYE 540
           ALSEMWQQEAASRAAIENGTEEGLGDSSESIP+AFPQ+I MEEED+EPARMNAHT+RCYE
Sbjct: 481 ALSEMWQQEAASRAAIENGTEEGLGDSSESIPMAFPQEITMEEEDVEPARMNAHTIRCYE 540

Query: 541 DQMVPSMTSS------------------------------------------------TR 600
           DQMVPSMTSS                                                TR
Sbjct: 541 DQMVPSMTSSVRLGDEPSLNIQSTAEDGRGEVPINANLNQEPTRNVVNPRVRPTDPTQTR 600

Query: 601 RPYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSS 634
            PYT GI LRT+ EDSTAES SSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSS
Sbjct: 601 LPYTPGIGLRTAAEDSTAESYSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSS 660

[Close]

BLAST of HG10013486 vs. NCBI nr
Match: XP_022936701.1 (cryptochrome-1 [Cucurbita moschata])

HSP 1 Score: 1239.9 bits (3207), Expect = 0.0e+00
Identity = 608/682 (89.15%), Postives = 620/682 (90.91%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLRVEDNPALTAAVR+GAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRSGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           A LDSSLRSLGTFL+TKRSTNTISALLDVVKATGASQLFFNHLYDPLSL+RDHRAKEVLS
Sbjct: 61  ALLDSSLRSLGTFLVTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLVRDHRAKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA
Sbjct: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180

Query: 181 S-RCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSAT 240
           S RCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPL+EYSKNRRKADSAT
Sbjct: 181 SRRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSAT 240

Query: 241 TSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFN 300
           TSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN+AG+ESVNLFLKSIGLREYSRYMSFN
Sbjct: 241 TSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEAGEESVNLFLKSIGLREYSRYMSFN 300

Query: 301 HPYSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS 360
           HPYSHERPLLGHLKFFPWVV EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS
Sbjct: 301 HPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS 360

Query: 361 SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYKF 420
           SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPD REFDRIDNPQLEGYK 
Sbjct: 361 SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKC 420

Query: 421 APNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEE 480
            P GEYVRRWLPELSRLPTEWIHHPWNAPE VLQAAGIELGSNYPLPIVGLDAAKARLEE
Sbjct: 421 DPYGEYVRRWLPELSRLPTEWIHHPWNAPEYVLQAAGIELGSNYPLPIVGLDAAKARLEE 480

Query: 481 ALSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYE 540
           ALSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQ+I MEEED+EPARMNAHT+RCYE
Sbjct: 481 ALSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQEITMEEEDVEPARMNAHTIRCYE 540

Query: 541 DQMVPSMTSS------------------------------------------------TR 600
           DQMVPSMTSS                                                TR
Sbjct: 541 DQMVPSMTSSVRLGDEPSLNIQSTAEDGRAEVPINANLNQELTRNVVNPRVRPNDPTQTR 600

Query: 601 RPYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSS 634
            PYT GI LRT+ EDSTAES SSSDVRRERDGGVVPVWSPPSSSYTEQFVV+ENGIGTSS
Sbjct: 601 LPYTPGIGLRTAAEDSTAESYSSSDVRRERDGGVVPVWSPPSSSYTEQFVVEENGIGTSS 660

[Close]

BLAST of HG10013486 vs. ExPASy Swiss-Prot
Match: Q43125 (Cryptochrome-1 OS=Arabidopsis thaliana OX=3702 GN=CRY1 PE=1 SV=2)

HSP 1 Score: 1052.0 bits (2719), Expect = 2.7e-306
Identity = 524/683 (76.72%), Postives = 568/683 (83.16%), Query Frame = 0


Query: 4   GGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHL 63
           GGCSIVWFRRDLRVEDNPAL AAVRAG V+A+F+WAPEEEGHY+PGRVSRWWLK SLA L
Sbjct: 11  GGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLKNSLAQL 70

Query: 64  DSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQG 123
           DSSLRSLGT L+TKRST+++++LLDVVK+TGASQ+FFNHLYDPLSL+RDHRAK+VL+AQG
Sbjct: 71  DSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQG 130

Query: 124 IGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDASRC 183
           I VRS+NADLLYEPW+V D  G PF+ FA FWERCLSMP DPE+PLLPPK+IISGD S+C
Sbjct: 131 IAVRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKIISGDVSKC 190

Query: 184 PCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATTSFL 243
             D LVFED+SEKGSNALLARAWSPGWSN DKALTTFINGPLLEYSKNRRKADSATTSFL
Sbjct: 191 VADPLVFEDDSEKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRRKADSATTSFL 250

Query: 244 SPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYS 303
           SPHLHFGEVSVRKVFHLVR+KQV WANEGN+AG+ESVNLFLKSIGLREYSRY+SFNHPYS
Sbjct: 251 SPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISFNHPYS 310

Query: 304 HERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV 363
           HERPLLGHLKFFPW V E YFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV
Sbjct: 311 HERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV 370

Query: 364 KVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYKFAPNG 423
           KVLQLPWRWGMKYFWDTLLDADLESDALGWQYI+GTLPD REFDRIDNPQ EGYKF PNG
Sbjct: 371 KVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPNG 430

Query: 424 EYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSE 483
           EYVRRWLPELSRLPT+WIHHPWNAPESVLQAAGIELGSNYPLPIVGLD AKARL EALS+
Sbjct: 431 EYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEALSQ 490

Query: 484 MWQQEAASRAAIENGTEEGLGDSS--ESIPIAFPQDIAMEEEDLEPARMNAHTVRCYEDQ 543
           MWQ EAASRAAIENG+EEGLGDS+  E  PI FP+DI MEE   EP R+N +  R YEDQ
Sbjct: 491 MWQLEAASRAAIENGSEEGLGDSAEVEEAPIEFPRDITMEE--TEPTRLNPN--RRYEDQ 550

Query: 544 MVPSMTSSTRRP---YTAGIALRTSV---------------------------------- 603
           MVPS+TSS  RP     + + LR SV                                  
Sbjct: 551 MVPSITSSLIRPEEDEESSLNLRNSVGDSRAEVPRNMVNTNQAQQRRAEPASNQVTAMIP 610

Query: 604 -----------EDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIG---TS 634
                      EDSTAESSSS   RRER GG+VP WSP    Y+EQF  +ENGIG   T+
Sbjct: 611 EFNIRIVAESTEDSTAESSSSG--RRERSGGIVPEWSP---GYSEQFPSEENGIGGGSTT 670

[Close]

BLAST of HG10013486 vs. ExPASy Swiss-Prot
Match: Q96524 (Cryptochrome-2 OS=Arabidopsis thaliana OX=3702 GN=CRY2 PE=1 SV=2)

HSP 1 Score: 661.4 bits (1705), Expect = 1.0e-188
Identity = 322/579 (55.61%), Postives = 407/579 (70.29%), Query Frame = 0


Query: 7   SIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHLDSS 66
           +IVWFRRDLR+EDNPAL AA   G+V  VFIW PEEEG +YPGR SRWW+KQSLAHL  S
Sbjct: 7   TIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSLAHLSQS 66

Query: 67  LRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQGIGV 126
           L++LG+ L   ++ NTISA+LD ++ TGA+++ FNHLYDP+SL+RDH  KE L  +GI V
Sbjct: 67  LKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVKEKLVERGISV 126

Query: 127 RSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDAS----- 186
           +SYN DLLYEPW++    G PFT+F  +W++CL M  +    L PP R++   A+     
Sbjct: 127 QSYNGDLLYEPWEIYCEKGKPFTSFNSYWKKCLDMSIE-SVMLPPPWRLMPITAAAEAIW 186

Query: 187 RCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATTS 246
            C  + L  E+E+EK SNALL RAWSPGWSNADK L  FI   L++Y+KN +K    +TS
Sbjct: 187 ACSIEELGLENEAEKPSNALLTRAWSPGWSNADKLLNEFIEKQLIDYAKNSKKVVGNSTS 246

Query: 247 FLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHP 306
            LSP+LHFGE+SVR VF   RMKQ++WA + N  G+ES +LFL+ IGLREYSRY+ FN P
Sbjct: 247 LLSPYLHFGEISVRHVFQCARMKQIIWARDKNSEGEESADLFLRGIGLREYSRYICFNFP 306

Query: 307 YSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSF 366
           ++HE+ LL HL+FFPW      FKAWRQGRTGYPLVDAGMRELWATGW+H+RIRV+VSSF
Sbjct: 307 FTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSF 366

Query: 367 FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYKFAP 426
            VK L LPW+WGMKYFWDTLLDADLE D LGWQYISG++PDG E DR+DNP L+G K+ P
Sbjct: 367 AVKFLLLPWKWGMKYFWDTLLDADLECDILGWQYISGSIPDGHELDRLDNPALQGAKYDP 426

Query: 427 NGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEAL 486
            GEY+R+WLPEL+RLPTEWIHHPW+AP +VL+A+G+ELG+NY  PIV +D A+  L +A+
Sbjct: 427 EGEYIRQWLPELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTARELLAKAI 486

Query: 487 SEMWQQEAASRAA---IENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCY 546
           S   + +    AA   I   + E LG ++   P   P   + +++     R N       
Sbjct: 487 SRTREAQIMIGAAPDEIVADSFEALGANTIKEPGLCPSVSSNDQQVPSAVRYNG------ 546

Query: 547 EDQMVPSMTSSTRRPYTAGIALRTSVEDSTAESSSSSDV 578
             ++ P          + G   R     STAESSSSS V
Sbjct: 547 SKRVKPEEEEERDMKKSRGFDERELF--STAESSSSSSV 576

[Close]

BLAST of HG10013486 vs. ExPASy Swiss-Prot
Match: P40115 (Cryptochrome-1 OS=Sinapis alba OX=3728 GN=PHR1 PE=2 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 8.3e-178
Identity = 293/488 (60.04%), Postives = 367/488 (75.20%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MS    +IVWFRRDLR+EDNPAL AA   G+V  VFIW PEEEG +YPGR SRWW+KQSL
Sbjct: 1   MSTNKKTIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHL  SL++LG+ L   ++ +T+SA+LD V+ATGA+++ FNHLYDP+SL+RDH  KE L 
Sbjct: 61  AHLRQSLKALGSELTLIKTHSTVSAILDCVRATGATKVVFNHLYDPVSLVRDHTVKEKLV 120

Query: 121 AQGIGVRSYNADLLYEP--WDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISG 180
            +GI V+SYN DL   P  + VK AN        G  ++CL M  +    L PP R++  
Sbjct: 121 ERGISVQSYNGDLCMSPGRYTVKRANLLLVLILTG--KKCLDMSVE-SVVLPPPWRLMPL 180

Query: 181 DASR----CPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRK 240
            A+     C  + L  E+E+EK SNALL RAWSPGWSNADK L  FI   L++Y+KN +K
Sbjct: 181 SAAETVWACSVEELGLENEAEKPSNALLTRAWSPGWSNADKILNEFIEKQLIDYAKNSKK 240

Query: 241 ADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSR 300
               +TS LSP+LHFGE+SVR+VF   RMKQ++WA + N  G+ES +LFL+ IGLR+YSR
Sbjct: 241 VVGNSTSLLSPYLHFGEISVRRVFQCARMKQIIWARDKNGEGEESADLFLRGIGLRDYSR 300

Query: 301 YMSFNHPYSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRI 360
            + FN P++HE+ LL HL+FFPW      FKAWRQGRTGYPLVDAGMRELWATGW+H+RI
Sbjct: 301 IICFNFPFTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRI 360

Query: 361 RVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQL 420
           RV+VSSF VK L LPW+WGMKYFWDTLLDADLE D +GWQYISG+LPDG E DR+DNP +
Sbjct: 361 RVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDIIGWQYISGSLPDGHELDRLDNPAI 420

Query: 421 EGYKFAPNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAK 480
           +G K+ P GEY+R+WLPEL+RLPTEWIHHPW+AP +VL+A+G+ELG+NY  PIV +D A+
Sbjct: 421 QGAKYDPEGEYIRQWLPELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVVIDTAR 480

Query: 481 ARLEEALS 483
             L +A+S
Sbjct: 481 ELLTKAIS 485

[Close]

BLAST of HG10013486 vs. ExPASy Swiss-Prot
Match: A9CJC9 (Deoxyribodipyrimidine photo-lyase OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=phrA PE=1 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.5e-86
Identity = 191/487 (39.22%), Postives = 263/487 (54.00%), Query Frame = 0


Query: 8   IVWFRRDLRVEDNPALTAAV-RAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHLDSS 67
           IVWFR+DLR+ DN AL AAV   G V+ V+I    E+     G    WWL  SLA L SS
Sbjct: 9   IVWFRKDLRLSDNLALLAAVEHGGPVIPVYI---REKSAGPLGGAQEWWLHHSLAALSSS 68

Query: 68  LRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQGIGV 127
           L   G  L+   S +    L D++  TGA  + +N  YDP  +  D   K+ L   G+ V
Sbjct: 69  LEKAGGRLVL-ASGDAERILRDLISETGADTVVWNRRYDPTGMATDKALKQKLRDDGLTV 128

Query: 128 RSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDASRCPCD 187
           RS++  LL+EP  ++  +G P+  +  FW R L    +P AP  PPK + +         
Sbjct: 129 RSFSGQLLHEPSRLQTKSGGPYRVYTPFW-RALEGSDEPHAPADPPKSLTAPKV------ 188

Query: 188 TLVFEDESEKGSNALL-----------ARAWSPGWSNADKALTTFINGPLLEYSKNRRKA 247
                 +SEK SN  L           +  W+PG + A   L  FI+G L  Y + R   
Sbjct: 189 ----WPKSEKLSNWKLLPTKPDWAKDFSDIWTPGETGALDKLDDFIDGALKGYEEGRDFP 248

Query: 248 DSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRY 307
               TS LSPHL  GE+S   V+H  +                 ++ F K I  RE+  +
Sbjct: 249 AKPATSLLSPHLAAGEISPAAVWHATK-------GLSRHIASNDISRFRKEIVWREFCYH 308

Query: 308 MSFNHPYSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIR 367
           + F+ P   E+        F W   E  FKAW +G TGYP+VDAGMR+LW  G +H+R+R
Sbjct: 309 LLFHFPELGEKNWNDSFDAFSWRDDEKSFKAWTRGMTGYPIVDAGMRQLWQHGTMHNRVR 368

Query: 368 VVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLE 427
           ++V+SF +K L + WR G K+F DTL+DAD  S+A  WQ+++G+  D   F RI NP L+
Sbjct: 369 MIVASFLIKHLLIDWRKGEKWFRDTLVDADPASNAANWQWVAGSGADASPFFRIFNPILQ 428

Query: 428 GYKFAPNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKA 483
           G KF  +G+YVRR++PEL +L  ++IH P+ AP+  L+ AG+ELG  YPLPIV  D  KA
Sbjct: 429 GEKFDGDGDYVRRFVPELEKLERKYIHKPFEAPKDALKKAGVELGKTYPLPIV--DHGKA 470

[Close]

BLAST of HG10013486 vs. ExPASy Swiss-Prot
Match: Q9KNA8 (Deoxyribodipyrimidine photo-lyase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=phrA PE=1 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.5e-57
Identity = 142/459 (30.94%), Postives = 228/459 (49.67%), Query Frame = 0


Query: 8   IVWFRRDLRVEDNPALTAAVRAG-AVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHLDSS 67
           +VWFRRDLR  DN ALTAA+ +G  V A++I  PE+   ++   +    + + LA L   
Sbjct: 3   LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQE 62

Query: 68  LRSLGTFLLTKRSTNTISALLDV---VKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQG 127
           L +L   L  ++  +  +A + V    K   A+Q+  N  Y+     RD  A+++LS QG
Sbjct: 63  LAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQG 122

Query: 128 IGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDASRC 187
           I   +++   +  P  V+   G  F  F  F    L++    + P++   R ++      
Sbjct: 123 IIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTL---FQPPVIGKNRPVALWNVPS 182

Query: 188 PCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATTSFL 247
               LV+  E       + +  W+  +      L  F    + +Y + R       TS L
Sbjct: 183 ALAELVWHPEQAFDYPRIDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPAREGTSSL 242

Query: 248 SPHLHFGEVSVR----KVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFN 307
           SP+L  G +S R    +++H   M ++           E   ++L  +  RE+ +++   
Sbjct: 243 SPYLAIGVLSARQCVARLYHESSMGEL----------SEGAQVWLSELIWREFYQHLVAI 302

Query: 308 HP-YSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVV 367
            P  S  R  +       W      F+ W +G+TGYP+VDA MR+L  TGW+H+R+R++V
Sbjct: 303 EPNLSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIV 362

Query: 368 SSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYK 427
           +SF  K L + WRWG +YF   L+D D  ++  GWQ+ + T  DG+ + RI NP  +G K
Sbjct: 363 ASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEK 422

Query: 428 FAPNGEYVRRWLPELSRLPTEWIHHPWNAP--ESVLQAA 456
           F PNG+++RRW+PEL  + + +IH PW  P   SVL  A
Sbjct: 423 FDPNGDFIRRWVPELRSVSSAYIHQPWTYPAVNSVLYPA 448

[Close]

BLAST of HG10013486 vs. ExPASy TrEMBL
Match: A0A0A0LDY1 (Photolyase/cryptochrome alpha/beta domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889670 PE=3 SV=1)

HSP 1 Score: 1267.3 bits (3278), Expect = 0.0e+00
Identity = 619/681 (90.90%), Postives = 625/681 (91.78%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLR+EDNPALTAAVRAGAVV VFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRIEDNPALTAAVRAGAVVVVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLGT+LLTKRSTNTISALLDV KATGAS LFFNHLYDPLSLIRDHR KEVLS
Sbjct: 61  AHLDSSLRSLGTYLLTKRSTNTISALLDVFKATGASHLFFNHLYDPLSLIRDHRVKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGI VRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA
Sbjct: 121 AQGIRVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180

Query: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240
           SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT
Sbjct: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240

Query: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFNH 300
           SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAG+ESVNLFLKSIGLREYSRYMSFNH
Sbjct: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH 300

Query: 301 PYSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
           PYSHERPLLGHLKFFPWVV EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
Sbjct: 301 PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360

Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYKFA 420
           FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPD REFDRIDNPQLEGYKF 
Sbjct: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420

Query: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480
           PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAG+ELGSNYPLPIVGLDAAKARLEEA
Sbjct: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGVELGSNYPLPIVGLDAAKARLEEA 480

Query: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYED 540
           LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAM+EED+EPARMNAHTVRCYED
Sbjct: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMDEEDIEPARMNAHTVRCYED 540

Query: 541 QMVPSMTSS------------------------------------------------TRR 600
           QMVPSMTSS                                                TRR
Sbjct: 541 QMVPSMTSSVRLEDESSLNIQSTAEDGRAEVPTNANLPQEPARDAVNPRAMPTAPTQTRR 600

Query: 601 PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS 634
           PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS
Sbjct: 601 PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS 660

[Close]

BLAST of HG10013486 vs. ExPASy TrEMBL
Match: A0A1S3CS50 (cryptochrome-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503708 PE=3 SV=1)

HSP 1 Score: 1265.8 bits (3274), Expect = 0.0e+00
Identity = 619/681 (90.90%), Postives = 625/681 (91.78%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLR+EDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRIEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLGTFLLTKRSTNTISALLDV KATGAS LFFNHLYDPLSLIRDHR KEVLS
Sbjct: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVFKATGASHLFFNHLYDPLSLIRDHRVKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGI VRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRI+SGDA
Sbjct: 121 AQGIRVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIVSGDA 180

Query: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240
           SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT
Sbjct: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240

Query: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFNH 300
           SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAG+ESVNLFLKSIGLREYSRYMSFNH
Sbjct: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH 300

Query: 301 PYSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
           PYSHERPLLGHLKFFPWVV EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
Sbjct: 301 PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360

Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYKFA 420
           FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPD REFDRIDNPQLEGYKF 
Sbjct: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420

Query: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480
           PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA
Sbjct: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480

Query: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYED 540
           LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAM+EED+EPAR+NAHTVRCYED
Sbjct: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMDEEDIEPARVNAHTVRCYED 540

Query: 541 QMVPSMTSS------------------------------------------------TRR 600
           QMVPSMTSS                                                TR 
Sbjct: 541 QMVPSMTSSVRLEDESSLNIQSTAEDGRAEVPTNANLPQEPARDAVNPRAMPTAPTQTRL 600

Query: 601 PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS 634
           PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS
Sbjct: 601 PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS 660

[Close]

BLAST of HG10013486 vs. ExPASy TrEMBL
Match: A0A5D3E5Y8 (Cryptochrome-1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006220 PE=3 SV=1)

HSP 1 Score: 1265.8 bits (3274), Expect = 0.0e+00
Identity = 619/681 (90.90%), Postives = 625/681 (91.78%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLR+EDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRIEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLGTFLLTKRSTNTISALLDV KATGAS LFFNHLYDPLSLIRDHR KEVLS
Sbjct: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVFKATGASHLFFNHLYDPLSLIRDHRVKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGI VRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRI+SGDA
Sbjct: 121 AQGIRVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIVSGDA 180

Query: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240
           SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT
Sbjct: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240

Query: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFNH 300
           SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAG+ESVNLFLKSIGLREYSRYMSFNH
Sbjct: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH 300

Query: 301 PYSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
           PYSHERPLLGHLKFFPWVV EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
Sbjct: 301 PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360

Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYKFA 420
           FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPD REFDRIDNPQLEGYKF 
Sbjct: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420

Query: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480
           PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA
Sbjct: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480

Query: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYED 540
           LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAM+EED+EPAR+NAHTVRCYED
Sbjct: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMDEEDIEPARVNAHTVRCYED 540

Query: 541 QMVPSMTSS------------------------------------------------TRR 600
           QMVPSMTSS                                                TR 
Sbjct: 541 QMVPSMTSSVRLEDESSLNIQSTAEDGRAEVPTNANLPQEPARDAVNPRAMPTAPTQTRL 600

Query: 601 PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS 634
           PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS
Sbjct: 601 PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS 660

[Close]

BLAST of HG10013486 vs. ExPASy TrEMBL
Match: A0A6J1F880 (cryptochrome-1 OS=Cucurbita moschata OX=3662 GN=LOC111443215 PE=3 SV=1)

HSP 1 Score: 1239.9 bits (3207), Expect = 0.0e+00
Identity = 608/682 (89.15%), Postives = 620/682 (90.91%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLRVEDNPALTAAVR+GAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRSGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           A LDSSLRSLGTFL+TKRSTNTISALLDVVKATGASQLFFNHLYDPLSL+RDHRAKEVLS
Sbjct: 61  ALLDSSLRSLGTFLVTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLVRDHRAKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA
Sbjct: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180

Query: 181 S-RCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSAT 240
           S RCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPL+EYSKNRRKADSAT
Sbjct: 181 SRRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSAT 240

Query: 241 TSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFN 300
           TSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN+AG+ESVNLFLKSIGLREYSRYMSFN
Sbjct: 241 TSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEAGEESVNLFLKSIGLREYSRYMSFN 300

Query: 301 HPYSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS 360
           HPYSHERPLLGHLKFFPWVV EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS
Sbjct: 301 HPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS 360

Query: 361 SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYKF 420
           SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPD REFDRIDNPQLEGYK 
Sbjct: 361 SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKC 420

Query: 421 APNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEE 480
            P GEYVRRWLPELSRLPTEWIHHPWNAPE VLQAAGIELGSNYPLPIVGLDAAKARLEE
Sbjct: 421 DPYGEYVRRWLPELSRLPTEWIHHPWNAPEYVLQAAGIELGSNYPLPIVGLDAAKARLEE 480

Query: 481 ALSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYE 540
           ALSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQ+I MEEED+EPARMNAHT+RCYE
Sbjct: 481 ALSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQEITMEEEDVEPARMNAHTIRCYE 540

Query: 541 DQMVPSMTSS------------------------------------------------TR 600
           DQMVPSMTSS                                                TR
Sbjct: 541 DQMVPSMTSSVRLGDEPSLNIQSTAEDGRAEVPINANLNQELTRNVVNPRVRPNDPTQTR 600

Query: 601 RPYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSS 634
            PYT GI LRT+ EDSTAES SSSDVRRERDGGVVPVWSPPSSSYTEQFVV+ENGIGTSS
Sbjct: 601 LPYTPGIGLRTAAEDSTAESYSSSDVRRERDGGVVPVWSPPSSSYTEQFVVEENGIGTSS 660

[Close]

BLAST of HG10013486 vs. ExPASy TrEMBL
Match: A0A6J1IHZ1 (cryptochrome-1 OS=Cucurbita maxima OX=3661 GN=LOC111476454 PE=3 SV=1)

HSP 1 Score: 1238.8 bits (3204), Expect = 0.0e+00
Identity = 607/682 (89.00%), Postives = 619/682 (90.76%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLRVEDNPALTAAVR+GAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRSGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLGTFL+TKRSTNTISALLDVVKATGASQLFFNHLYDPLSL+RDHRAKEVLS
Sbjct: 61  AHLDSSLRSLGTFLVTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLVRDHRAKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA
Sbjct: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180

Query: 181 S-RCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSAT 240
           S RC CDTL+FEDESEKGSNALLARAWSPGWSNADKALTTFINGPL+EYSKNRRKADSAT
Sbjct: 181 SRRCQCDTLLFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSAT 240

Query: 241 TSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFN 300
           TSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAG+ESVNLFLKSIGLREYSRYMSFN
Sbjct: 241 TSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFN 300

Query: 301 HPYSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS 360
           HPYSHERPLLGHLKFFPWVV EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS
Sbjct: 301 HPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS 360

Query: 361 SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYKF 420
           SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPD REFDRIDNPQLEGYK 
Sbjct: 361 SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKC 420

Query: 421 APNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEE 480
            P GEYVRRWLPELSRLPTEWIHHPWNAPE VLQAAGIELGSNYPLPIVGLDAAKARLEE
Sbjct: 421 DPYGEYVRRWLPELSRLPTEWIHHPWNAPEYVLQAAGIELGSNYPLPIVGLDAAKARLEE 480

Query: 481 ALSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYE 540
           ALSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQ+I MEEED+EPARMNAHT+RCYE
Sbjct: 481 ALSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQEITMEEEDVEPARMNAHTIRCYE 540

Query: 541 DQMVPSMTSS------------------------------------------------TR 600
           DQMVPSMTSS                                                TR
Sbjct: 541 DQMVPSMTSSVRLGDEPSLNIQSTAEDGRAEVPINANLNQEPTRNVVNPRVRPTNPTQTR 600

Query: 601 RPYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSS 634
            PYT GI L T+ EDSTAES SSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSS
Sbjct: 601 LPYTPGIGLGTAAEDSTAESYSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSS 660

[Close]

BLAST of HG10013486 vs. TAIR 10
Match: AT4G08920.1 (cryptochrome 1 )

HSP 1 Score: 1052.0 bits (2719), Expect = 1.9e-307
Identity = 524/683 (76.72%), Postives = 568/683 (83.16%), Query Frame = 0


Query: 4   GGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHL 63
           GGCSIVWFRRDLRVEDNPAL AAVRAG V+A+F+WAPEEEGHY+PGRVSRWWLK SLA L
Sbjct: 11  GGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLKNSLAQL 70

Query: 64  DSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQG 123
           DSSLRSLGT L+TKRST+++++LLDVVK+TGASQ+FFNHLYDPLSL+RDHRAK+VL+AQG
Sbjct: 71  DSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQG 130

Query: 124 IGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDASRC 183
           I VRS+NADLLYEPW+V D  G PF+ FA FWERCLSMP DPE+PLLPPK+IISGD S+C
Sbjct: 131 IAVRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKIISGDVSKC 190

Query: 184 PCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATTSFL 243
             D LVFED+SEKGSNALLARAWSPGWSN DKALTTFINGPLLEYSKNRRKADSATTSFL
Sbjct: 191 VADPLVFEDDSEKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRRKADSATTSFL 250

Query: 244 SPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYS 303
           SPHLHFGEVSVRKVFHLVR+KQV WANEGN+AG+ESVNLFLKSIGLREYSRY+SFNHPYS
Sbjct: 251 SPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISFNHPYS 310

Query: 304 HERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV 363
           HERPLLGHLKFFPW V E YFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV
Sbjct: 311 HERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV 370

Query: 364 KVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYKFAPNG 423
           KVLQLPWRWGMKYFWDTLLDADLESDALGWQYI+GTLPD REFDRIDNPQ EGYKF PNG
Sbjct: 371 KVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPNG 430

Query: 424 EYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSE 483
           EYVRRWLPELSRLPT+WIHHPWNAPESVLQAAGIELGSNYPLPIVGLD AKARL EALS+
Sbjct: 431 EYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEALSQ 490

Query: 484 MWQQEAASRAAIENGTEEGLGDSS--ESIPIAFPQDIAMEEEDLEPARMNAHTVRCYEDQ 543
           MWQ EAASRAAIENG+EEGLGDS+  E  PI FP+DI MEE   EP R+N +  R YEDQ
Sbjct: 491 MWQLEAASRAAIENGSEEGLGDSAEVEEAPIEFPRDITMEE--TEPTRLNPN--RRYEDQ 550

Query: 544 MVPSMTSSTRRP---YTAGIALRTSV---------------------------------- 603
           MVPS+TSS  RP     + + LR SV                                  
Sbjct: 551 MVPSITSSLIRPEEDEESSLNLRNSVGDSRAEVPRNMVNTNQAQQRRAEPASNQVTAMIP 610

Query: 604 -----------EDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIG---TS 634
                      EDSTAESSSS   RRER GG+VP WSP    Y+EQF  +ENGIG   T+
Sbjct: 611 EFNIRIVAESTEDSTAESSSSG--RRERSGGIVPEWSP---GYSEQFPSEENGIGGGSTT 670

[Close]

BLAST of HG10013486 vs. TAIR 10
Match: AT1G04400.2 (cryptochrome 2 )

HSP 1 Score: 661.4 bits (1705), Expect = 7.4e-190
Identity = 322/579 (55.61%), Postives = 407/579 (70.29%), Query Frame = 0


Query: 7   SIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHLDSS 66
           +IVWFRRDLR+EDNPAL AA   G+V  VFIW PEEEG +YPGR SRWW+KQSLAHL  S
Sbjct: 7   TIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSLAHLSQS 66

Query: 67  LRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQGIGV 126
           L++LG+ L   ++ NTISA+LD ++ TGA+++ FNHLYDP+SL+RDH  KE L  +GI V
Sbjct: 67  LKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVKEKLVERGISV 126

Query: 127 RSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDAS----- 186
           +SYN DLLYEPW++    G PFT+F  +W++CL M  +    L PP R++   A+     
Sbjct: 127 QSYNGDLLYEPWEIYCEKGKPFTSFNSYWKKCLDMSIE-SVMLPPPWRLMPITAAAEAIW 186

Query: 187 RCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATTS 246
            C  + L  E+E+EK SNALL RAWSPGWSNADK L  FI   L++Y+KN +K    +TS
Sbjct: 187 ACSIEELGLENEAEKPSNALLTRAWSPGWSNADKLLNEFIEKQLIDYAKNSKKVVGNSTS 246

Query: 247 FLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHP 306
            LSP+LHFGE+SVR VF   RMKQ++WA + N  G+ES +LFL+ IGLREYSRY+ FN P
Sbjct: 247 LLSPYLHFGEISVRHVFQCARMKQIIWARDKNSEGEESADLFLRGIGLREYSRYICFNFP 306

Query: 307 YSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSF 366
           ++HE+ LL HL+FFPW      FKAWRQGRTGYPLVDAGMRELWATGW+H+RIRV+VSSF
Sbjct: 307 FTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSF 366

Query: 367 FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYKFAP 426
            VK L LPW+WGMKYFWDTLLDADLE D LGWQYISG++PDG E DR+DNP L+G K+ P
Sbjct: 367 AVKFLLLPWKWGMKYFWDTLLDADLECDILGWQYISGSIPDGHELDRLDNPALQGAKYDP 426

Query: 427 NGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEAL 486
            GEY+R+WLPEL+RLPTEWIHHPW+AP +VL+A+G+ELG+NY  PIV +D A+  L +A+
Sbjct: 427 EGEYIRQWLPELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTARELLAKAI 486

Query: 487 SEMWQQEAASRAA---IENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCY 546
           S   + +    AA   I   + E LG ++   P   P   + +++     R N       
Sbjct: 487 SRTREAQIMIGAAPDEIVADSFEALGANTIKEPGLCPSVSSNDQQVPSAVRYNG------ 546

Query: 547 EDQMVPSMTSSTRRPYTAGIALRTSVEDSTAESSSSSDV 578
             ++ P          + G   R     STAESSSSS V
Sbjct: 547 SKRVKPEEEEERDMKKSRGFDERELF--STAESSSSSSV 576

[Close]

BLAST of HG10013486 vs. TAIR 10
Match: AT1G04400.1 (cryptochrome 2 )

HSP 1 Score: 661.4 bits (1705), Expect = 7.4e-190
Identity = 322/579 (55.61%), Postives = 407/579 (70.29%), Query Frame = 0


Query: 7   SIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHLDSS 66
           +IVWFRRDLR+EDNPAL AA   G+V  VFIW PEEEG +YPGR SRWW+KQSLAHL  S
Sbjct: 7   TIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSLAHLSQS 66

Query: 67  LRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQGIGV 126
           L++LG+ L   ++ NTISA+LD ++ TGA+++ FNHLYDP+SL+RDH  KE L  +GI V
Sbjct: 67  LKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVKEKLVERGISV 126

Query: 127 RSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDAS----- 186
           +SYN DLLYEPW++    G PFT+F  +W++CL M  +    L PP R++   A+     
Sbjct: 127 QSYNGDLLYEPWEIYCEKGKPFTSFNSYWKKCLDMSIE-SVMLPPPWRLMPITAAAEAIW 186

Query: 187 RCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATTS 246
            C  + L  E+E+EK SNALL RAWSPGWSNADK L  FI   L++Y+KN +K    +TS
Sbjct: 187 ACSIEELGLENEAEKPSNALLTRAWSPGWSNADKLLNEFIEKQLIDYAKNSKKVVGNSTS 246

Query: 247 FLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHP 306
            LSP+LHFGE+SVR VF   RMKQ++WA + N  G+ES +LFL+ IGLREYSRY+ FN P
Sbjct: 247 LLSPYLHFGEISVRHVFQCARMKQIIWARDKNSEGEESADLFLRGIGLREYSRYICFNFP 306

Query: 307 YSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSF 366
           ++HE+ LL HL+FFPW      FKAWRQGRTGYPLVDAGMRELWATGW+H+RIRV+VSSF
Sbjct: 307 FTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSF 366

Query: 367 FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLEGYKFAP 426
            VK L LPW+WGMKYFWDTLLDADLE D LGWQYISG++PDG E DR+DNP L+G K+ P
Sbjct: 367 AVKFLLLPWKWGMKYFWDTLLDADLECDILGWQYISGSIPDGHELDRLDNPALQGAKYDP 426

Query: 427 NGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEAL 486
            GEY+R+WLPEL+RLPTEWIHHPW+AP +VL+A+G+ELG+NY  PIV +D A+  L +A+
Sbjct: 427 EGEYIRQWLPELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTARELLAKAI 486

Query: 487 SEMWQQEAASRAA---IENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCY 546
           S   + +    AA   I   + E LG ++   P   P   + +++     R N       
Sbjct: 487 SRTREAQIMIGAAPDEIVADSFEALGANTIKEPGLCPSVSSNDQQVPSAVRYNG------ 546

Query: 547 EDQMVPSMTSSTRRPYTAGIALRTSVEDSTAESSSSSDV 578
             ++ P          + G   R     STAESSSSS V
Sbjct: 547 SKRVKPEEEEERDMKKSRGFDERELF--STAESSSSSSV 576

[Close]

BLAST of HG10013486 vs. TAIR 10
Match: AT3G15620.1 (DNA photolyase family protein )

HSP 1 Score: 172.6 bits (436), Expect = 1.0e-42
Identity = 147/512 (28.71%), Postives = 235/512 (45.90%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGA-VVAVFIWAP----EEEGHYYPGR----V 60
           M+ G  S++WFR+ LRV DNPAL  A +    +  VF+  P     +   + PG     V
Sbjct: 20  MATGSGSLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHYMESDPSAFSPGSSRAGV 79

Query: 61  SR-WWLKQSLAHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLI 120
           +R  +L +SL  LDSSL+ LG+ LL  +       L+  ++     +L F +  DP    
Sbjct: 80  NRIRFLLESLKDLDSSLKKLGSRLLVFKG-EPGEVLVRCLQEWKVKRLCFEYDTDPYYQA 139

Query: 121 RDHRAKEVLSAQGIGVRSYNADLLYEPWDVKDAN-GNPFTTFAGFWE-----RCLSMPCD 180
            D + K+  S+ G+ V S  +  L+ P  + + N G P  ++  F +      C      
Sbjct: 140 LDVKVKDYASSTGVEVFSPVSHTLFNPAHIIEKNGGKPPLSYQSFLKVAGEPSCAKSELV 199

Query: 181 PEAPLLPPKRIIS--GDASRCPCDTLVFEDESEKGSNALLARAWSP---GWSNADKALTT 240
                LPP   I   G +     + L ++D+ +          W+P   G S A K LT 
Sbjct: 200 MSYSSLPPIGDIGNLGISEVPSLEELGYKDDEQAD--------WTPFRGGESEALKRLTK 259

Query: 241 FINGPLLEYSKNRRKADSA-----TTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNK 300
            I+      +  + K D +      T+ +SP+L FG +S R  +  +   Q ++  +  K
Sbjct: 260 SISDKAWVANFEKPKGDPSAFLKPATTVMSPYLKFGCLSSRYFYQCL---QNIY-KDVKK 319

Query: 301 AGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVGEGYFKAWRQGRTGY 360
                V+L L  +  RE+    +F  P   +       K  PW        AWR G+TGY
Sbjct: 320 HTSPPVSL-LGQLLWREFFYTTAFGTPNFDKMKGNRICKQIPWNEDHAMLAAWRDGKTGY 379

Query: 361 PLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGW 420
           P +DA M +L   GW+H   R  V+ F  +  L + W  G   F   L+D+D   +   W
Sbjct: 380 PWIDAIMVQLLKWGWMHHLARHCVACFLTRGDLFIHWEQGRDVFERLLIDSDWAINNGNW 439

Query: 421 QYISGTLPDGREFDRIDNPQLEGYKFAPNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQ 480
            ++S +     +F+RI +P   G K+ P+G+Y+R +LP L  +P ++I+ PW AP SV  
Sbjct: 440 MWLSCS-SFFYQFNRIYSPISFGKKYDPDGKYIRHFLPVLKDMPKQYIYEPWTAPLSVQT 499

Query: 481 AAGIELGSNYPLPIVGLDAAKARLEEALSEMW 486
            A   +G +YP P+V  D+A    +  + E +
Sbjct: 500 KANCIVGKDYPKPMVLHDSASKECKRKMGEAY 516

[Close]

BLAST of HG10013486 vs. TAIR 10
Match: AT5G24850.1 (cryptochrome 3 )

HSP 1 Score: 130.2 bits (326), Expect = 5.9e-30
Identity = 136/467 (29.12%), Postives = 197/467 (42.18%), Query Frame = 0


Query: 3   GGGCSIVWFRRDLRVEDNPALTAA-VRAGAVVAVFIWAPE--EEGHYY----PGRVSRWW 62
           G G +I+WFR DLRV DN AL  A   +  ++ V+   P      H++     G +   +
Sbjct: 39  GKGVTILWFRNDLRVLDNDALYKAWSSSDTILPVYCLDPRLFHTTHFFNFPKTGALRGGF 98

Query: 63  LKQSLAHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRA 122
           L + L  L  +L   G  LL  RS      L  + K  GA  +F +       +  +   
Sbjct: 99  LMECLVDLRKNLMKRGLNLLI-RSGKPEEILPSLAKDFGARTVFAHKETCSEEVDVERLV 158

Query: 123 KEVLSAQG--------IGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEA 182
            + L   G         G   Y+ D L  P+DV D   + +T F    E   S+      
Sbjct: 159 NQGLKRVGNSTKLELIWGSTMYHKDDL--PFDVFDL-PDVYTQFRKSVEAKCSIRSSTRI 218

Query: 183 PL-LPPKRIISGDASRCPCDTLVFE-DESEKGSNALLARAWSPGWSNADKALTTFINGPL 242
           PL L P   +         + L  E  E  +G   +   +   G     +    F    L
Sbjct: 219 PLSLGPTPSVDDWGDVPTLEKLGVEPQEVTRGMRFVGGESAGVG-----RVFEYFWKKDL 278

Query: 243 LEYSKNRRK---ADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNL 302
           L+  K  R        +T F SP L FG +S R ++  V+        E  +  + S   
Sbjct: 279 LKVYKETRNGMLGPDYSTKF-SPWLAFGCISPRFIYEEVQ------RYEKERVANNSTYW 338

Query: 303 FLKSIGLREYSRYMSFNHPYSHERPLLGHL-----KFFPWVVGEGYFKAWRQGRTGYPLV 362
            L  +  R+Y R++S     S     L HL         W   +  F++WR  +TGYPL+
Sbjct: 339 VLFELIWRDYFRFLSIKCGNS-----LFHLGGPRNVQGKWSQDQKLFESWRDAKTGYPLI 398

Query: 363 DAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 422
           DA M+EL  TG++ +R R +V SF V+ + L WR G ++F   LLD D  S+   W Y +
Sbjct: 399 DANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGA 458

Query: 423 GTLPDGREFDRIDNPQLEGYKFAPNGEYVRRWLPELSRLPTEWIHHP 445
           G   D RE DR  +   +   + P GEYV  WL +L RLP E  H P
Sbjct: 459 GVGNDPRE-DRYFSIPKQAQNYDPEGEYVAFWLQQLRRLPKEKRHWP 483

The following BLAST results are available for this feature:

BLAST of HG10013486 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897472.1	0.0e+00	91.78	cryptochrome-1 isoform X1 [Benincasa hispida] >XP_038897473.1 cryptochrome-1 iso...	[more]
XP_004136290.1	0.0e+00	90.90	cryptochrome-1 isoform X2 [Cucumis sativus] >XP_011652550.1 cryptochrome-1 isofo...	[more]
XP_008466232.1	0.0e+00	90.90	PREDICTED: cryptochrome-1 isoform X1 [Cucumis melo] >XP_008466233.1 PREDICTED: c...	[more]
KAG6591664.1	0.0e+00	89.15	Cryptochrome-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022936701.1	0.0e+00	89.15	cryptochrome-1 [Cucurbita moschata]	[more]

BLAST of HG10013486 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43125	2.7e-306	76.72	Cryptochrome-1 OS=Arabidopsis thaliana OX=3702 GN=CRY1 PE=1 SV=2	[more]
Q96524	1.0e-188	55.61	Cryptochrome-2 OS=Arabidopsis thaliana OX=3702 GN=CRY2 PE=1 SV=2	[more]
P40115	8.3e-178	60.04	Cryptochrome-1 OS=Sinapis alba OX=3728 GN=PHR1 PE=2 SV=1	[more]
A9CJC9	1.5e-86	39.22	Deoxyribodipyrimidine photo-lyase OS=Agrobacterium fabrum (strain C58 / ATCC 339...	[more]
Q9KNA8	2.5e-57	30.94	Deoxyribodipyrimidine photo-lyase OS=Vibrio cholerae serotype O1 (strain ATCC 39...	[more]

BLAST of HG10013486 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDY1	0.0e+00	90.90	Photolyase/cryptochrome alpha/beta domain-containing protein OS=Cucumis sativus ...	[more]
A0A1S3CS50	0.0e+00	90.90	cryptochrome-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503708 PE=3 SV=1	[more]
A0A5D3E5Y8	0.0e+00	90.90	Cryptochrome-1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1F880	0.0e+00	89.15	cryptochrome-1 OS=Cucurbita moschata OX=3662 GN=LOC111443215 PE=3 SV=1	[more]
A0A6J1IHZ1	0.0e+00	89.00	cryptochrome-1 OS=Cucurbita maxima OX=3661 GN=LOC111476454 PE=3 SV=1	[more]

BLAST of HG10013486 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G08920.1	1.9e-307	76.72	cryptochrome 1	[more]
AT1G04400.2	7.4e-190	55.61	cryptochrome 2	[more]
AT1G04400.1	7.4e-190	55.61	cryptochrome 2	[more]
AT3G15620.1	1.0e-42	28.71	DNA photolyase family protein	[more]
AT5G24850.1	5.9e-30	29.12	cryptochrome 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 470..490
None	No IPR available	GENE3D	1.10.579.10	DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3	coord: 301..502 e-value: 1.4E-75 score: 255.0
None	No IPR available	GENE3D	1.25.40.80		coord: 134..293 e-value: 2.9E-98 score: 331.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 558..595
None	No IPR available	PANTHER	PTHR11455:SF50	CRYPTOCHROME-1	coord: 1..586
IPR002081	Cryptochrome/DNA photolyase class 1	PRINTS	PR00147	DNAPHOTLYASE	coord: 352..370 score: 40.13 coord: 143..159 score: 20.59 coord: 391..405 score: 31.67 coord: 332..348 score: 66.91
IPR002081	Cryptochrome/DNA photolyase class 1	PANTHER	PTHR11455	CRYPTOCHROME	coord: 1..586
IPR006050	DNA photolyase, N-terminal	PFAM	PF00875	DNA_photolyase	coord: 7..161 e-value: 1.1E-38 score: 132.8
IPR006050	DNA photolyase, N-terminal	PROSITE	PS51645	PHR_CRY_ALPHA_BETA	coord: 5..134 score: 34.034527
IPR014134	Cryptochrome, plant	TIGRFAM	TIGR02766	TIGR02766	coord: 6..482 e-value: 4.8E-284 score: 940.4
IPR005101	Cryptochrome/DNA photolyase, FAD-binding domain	PFAM	PF03441	FAD_binding_7	coord: 283..481 e-value: 1.8E-61 score: 207.1
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 8..206 e-value: 2.9E-98 score: 331.1
IPR020978	Cryptochrome C-terminal	PFAM	PF12546	Cryptochrome_C	coord: 511..577 e-value: 1.2E-11 score: 45.2
IPR018394	Cryptochrome/DNA photolyase class 1, conserved site, C-terminal	PROSITE	PS00394	DNA_PHOTOLYASES_1_1	coord: 332..344
IPR018394	Cryptochrome/DNA photolyase class 1, conserved site, C-terminal	PROSITE	PS00691	DNA_PHOTOLYASES_1_2	coord: 352..371
IPR036155	Cryptochrome/photolyase, N-terminal domain superfamily	SUPERFAMILY	52425	Cryptochrome/photolyase, N-terminal domain	coord: 7..175
IPR036134	Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily	SUPERFAMILY	48173	Cryptochrome/photolyase FAD-binding domain	coord: 192..488

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013486.1	HG10013486.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009785	blue light signaling pathway
biological_process	GO:0032922	circadian regulation of gene expression
biological_process	GO:0043153	entrainment of circadian clock by photoperiod
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0006950	response to stress
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0009882	blue light photoreceptor activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0071949	FAD binding