HG10013463 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10013463
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionisoamylase 3, chloroplastic isoform X2
LocationChr02: 1736692 .. 1748172 (-)
RNA-Seq ExpressionHG10013463
SyntenyHG10013463
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATTCCAAACTCCCTTCCACCTGCCAAGCCAAAAAAAACCAGCACTACTACAGGTAAAAAACCCAAGCTACAAAGAGAACTCCTCGGCTTACACTCATCGATTCACTATGATAAGAAGCAACATTGGCCATCGGGAGGGTACTTCGGAAGATCAATGAAATTCATTTCTTGGAACGTTCGGGACTCATTCTGGAGGAAACGTACTTTGGTTAAAAAGCTCATCCAGCAACATAATCCAGGTATTGTTCTTTTGCAGGAAACAAAACTTTCTTCAGTGGATTCTTCCTTAATAAATCCATTGGAGCTCCGCTTATATGGCTGGACAACATTAGATGCCATTGACTCATCAGGGTATTTTATTCTATGAGTGAGCGGATACACTGTACTAGAGGTTATTCAGGGACATTTTTCTGTTTCGATTAATGTACCGTTGACAGATGGTTACTCATTTTGGATCACAGCAATTTATGGCCCCTCTGATAATTTGGCTGGATTGGGTGGTGATAATTGGGTTATTGGTGGAGATTTTAATGTTACTAGATGGTCTTGGGAGAAATCACACGACAGAACAATTTCATCCAGTATGCGCGCCTTACAATAGATTACCAACCATCAATTATGTGATATCCCACTAACAAATGGTTGTTTTACTTGGTCCAGTTCCGGTCCAATACAGTATTTGTCTCTCCTCGATCGGTTTTTAATTACGGACAATTGCCTTCGTAAATTTGGCTCAGTTTCCCTTAAACGTCTGGATAGAACAACATCTGATCATTTCCATTGGCATTATCATCCGGAAATATTGTCTGGGGTCCATGTCCTTTCAGATTTGAGAATGCATGGTTACAAGTTCCTTTATTTCGCAAACTGGTTGAGGACTGGTGGTGACAACATCCTATTACTGATTGGCCGGGACATGGTTTTATGATGAAATTGAAAGGATTGAAACTCGCTATCCGTGAATGGAATACAAATCAACGCATGGAAGCTTCTAAGCTTCCTTCTCTAGTGAATCAACTAAAGCATCTAGATGACTTGGAAGATAGAGGCACTCTCACGATGGAACAGATTAACAGACGTCGTTTGCTTCGAGAACAGATTGAAAACTTGACAGTTCAAGAACATTTCATTGGCAACAGCGATGCAAGCTTAAAGCTTCTCGAAGGGAATGAAAATACCAGTTTTTCATCGATTGTCGCTGCCCGCCGCCGTAAAAACTCCATTTCTGAAATTTATCGCGGGATGGCACAAGTCTGTTGACGGCACAAGCTATTGATAATGAATTCTTGGCTTTCTACTCATCCCTCTTCACAAAAGATGGTAATCAACGCTTCCTTCCACCAATCTAGACTGGAGTCCTATCCTCTACTCAATCATCCGAGCTAGAACGACCCTTCACAGAAAATGAGGTCTTTGCGGCAGTATCCTCTCTTGGTGCTTGCAAATCTCCTGGCCCTGATGGTTTTACAGCTGAATTCTTCAAGTTTTTCTGGGCCATATTAAAGATGATTTCATGCTATTGATTAATGATTCTTTAATTCTGGGGTCATCAATGTTAAACTAAATGAGACCTATATCTGCCTAATCCCAAAGAAAAGGACTCTAAATCAGTCTCTAATTATAGACCGATAAGTCTCATCCCATGTGCATACAAGATTGTTGCTCGTGTTCTCTCAAACAGACTTAAGATGGTCCTTCCTTTTACCATAGCTGACAATCAGCTGGCTTTTGTTGCCAACGGCAAATTCTTGATGCTTCTTTGATGGCTAATGAGCTCATAGACGATGGACCTCTTCGAGTAAGGTGGGATTGTTCTGAAGCTTGATCTTGAGAAGGCTTTCGACATGGTGGATTGGGCTTTCTTGATTCAGTTCTCAAGGCTAAAGGCTTTGGCCAACTCTAGCGCACATGGATAAGAGGTTGTCTATAGTGCCAACTACTCATTATCCTAATGGTGTCCTGTGGCAAGATTATTCCATCTCGAGGATAGGTAGGGACCTCTATCTCCCTTTATTCATTTTAGTCGCTGACTGCCTGAGTCGTTCCTCGACCATAGTTCCTCATTAGGTCTCACGATTCTCATCCCATTGGTCTTTCAGCTGTTTCTCTGAATCATTTACAGTTTGCTAATGACATTTTGCTGTTTTCTATTGCTGAGCGCTCTGCCATACAAAATCTATTTGATGTTGTCAGAATTTTGAATGCGCATCTGGTCTTAAAATTAATTTATCAAAGTGAGCTCCTTGGGATTCCGTTACAGAGGATGATTTGGAAGGATTGTGTGTGCTTTTGATGTAAAAAGGGCTCTTGCCGATACCTATCTGGGCTTACCATTGGGTGGCAATTCAAATTCTGTCAACTTTGGCAACCGGTGGTGGAACGTTTTCAGCATAAACTTCATAATTGGAAGTACGCTTATATTTCGAAAGGGGGTAGACATACGCTCATACAGGCCACTCTCTCTAGTCTCCCTACATATATTTGTCTTTGTTCAGAGCCCTGCTACAGTCATTAGTTGCCTTGATAGATGGTTCGTGATTTCTTTGGGAAGGTATTCGAGGTGATGGAGCATGCACAATGTTAATTGGGCAATCTCTCGCGTCTAGCATCTGAGAGGGCTAGGTATGGGAACTTAAGCATCGTAATTCTGCTCTTCTTGCTAAATGGGCGTGGCGTTCCTAACTGAGCGATCTGCCTATGGAGGAAACTTATTGTGGCCATGTATATCCTCCTGACTGCACATGGCCTACTTTAATTTCCGAGGTTCAGCAAAATCTCCATGGCGGTCCATCAGTCAGTATATTGATTGGTTGCCAACGTATAGTTCGTCATTTGGGTGATGGTGCTTCTACGTCATTTGGCATGATTCTTGGCTTAGTTGTGGTATTCTTGCGACAAATATCCACGACTTTATCGCATCACCGAACATCCAGAAATCACAGTTGCAAATGTCTGGGTCCCCTCTACTGGTGCGTGGAATTTAAATTTATGAGCAACCTTACTGAGTTAGAGATGGAATGGGCCTCCTACTTCTTACTGCCTCCATCAGATTGCGAAACTCTTCTGACACTTGGCTGTGACTCTTGACCCTGCCTCCAATTTCACTGTCAAATCTCATGGTGATTTAGTGGGCGCATTGGATGGGCTCCTACTGATCTTATTCTGTGATTTGGAAAGACAAATATCAAAAAGATTAAAATCTTTTTTGGGATCTCAGTTGGAGTGCATAATACTGCTGATTGCTTGCAACGCCGCTTTCCTCTTGGCATTTATCTCCTCTTGGTGCCACTTGGTTGTAGACAAAACGAAACGCCGACCCATCTCTTTTACATTGTTCCTTTGCTAACAGATTTGGAATACTGTCTTGCCTACTTTTGGATGGTCATACACATGCCCTAATAATATCTCAGACGCTCTGTCATCTTTGTGATGGGACATCCTTTGGTGGTACTAAGAAAATATTTGGTTGGCTCTATTCGAGCTTTCCTTTGGACACTCTGGGGAAAGATAGACGACTCTTTCAGGATCTCTCTCCTCTTATCAACACTTTTTGGAACTTGTTTTATTTACTGCCTTTTCTTGGTGTAAAACGCAACATCCTTTTACTCATTATAGTTTATCCTTTTTAGTCAGTAACTGACTATCCCTCCTATAATCTGTATTCTTTGGGGTTAATCAAACATCAATTATCAATAAACGTTTCCTTTACCAAAAAAAAAATAAGTCATAAATTAGTCCCTGTTGGTGGTCAATTATTGATTTTCTTAAAAAAAAAAAAGTTAGTATTAACATCCCTTTATAAATTTTGAAACTATATTCACATAGTTCTTCTTGCATGAAATTAAGTTGTATTTAACAAGTTTTGATAAAAAAAATTATTCAAAAGACAAGGATTAAATTTGGACACTTGAAAGTAAAGGGACTAGGAACCAAAATGGTATTTTAACCCTAAAATGCACAGCTTTTCATGTCATAATTTTACAATTTTTACACAAGTACTGTCATTGATATCATAGTGAGCTTCATGCTGCAATTTTTGAATGACAAAATTCTTGATTCTTCTGCAGTCTTGAAATTTTTTAATATATTCTTCAGTGTCAAGTCAATTTGTAATATTCCCTCTGAGATAATTGATCCATCTTCTGCGTGTTGCCATTGTCAATTTGTAATTATTGAACTGAATGTTGGGTCTACCTGTTAATGTTGCAATCTAATTAAGTGTATGTTTGGTGTAAATTTAGTCATCTTTATTTGCTTTGTAGATATCATATTTGCCTCTTGTCAGTTTAATTTTATTTTAGCATAAGTCAGGTAGATATGGCACAAGATTTACATCTTTTGTTGTTTCAGGCAATTTCAAAAGATGCTATTCTATCAAGGTGTAAAATAATTGCAGAACCTTGGGATTGTGGAGGTCTTTATCTTGTTGGAAGCTTTCCAAATTGGGATCGGTAGCTATCTCTTTCCCTCCGCATTATTAATTTTGGATTCCAATATATCTTTTGTTAGAGTTACATGTCAGAAACATGTATATGCATATGTCTCTTGTCTTTTGTTTTTGATATGAAACAACATATGCATATGTCTTTTGTTTGATTACCGTTCATCTTAGAAGCTTAAGCTTTTAAAATTAGTGATATTTAACAAGTTAAGTATGAGTTAATAACTGACATATGATATTAAATATGTGATATGTTCTTATTCTTTTTTGTATTGTATATTTTGTTGAGCATTGGGTTTTTTGCCCGACTTTAAGGGGGTGTTTGGGCTAACTTCAAGTGGGTGGAGTGAGCTATTATAGCCAACTCCATATTTGGGACTCCAATTATAATAGTTGGTGTTTCCGACTATTATAATGTAAGGATACTTCCTCACTAAATAGTATTTCAAGCGATATTTCCAGAAAACAGGGACTATCGTCTGAATACAGTAGAGTCAACAACAAACTAAGTAATACGAAATACAAATAAAGAGCAATAACCACAGCCAAAAAGTGGGCTGCTCTCCCCTTCCCAAGAACACTGTTCTATTTCAAAATTCAAGATAACTAACCCTAATGCCAAAACGATGTATAAATACTAACATTCCCTTCCCATCATTGTACTCCCCTGGACCACTCCTTATGCAGCTCCTGTCTAGGGTGTAATCCCCTTTTTGCCCCTCCTCGAATATACCTTTGTGATAGGAAGCTTAGCATATAACCTACAATTAACTATAGTATTACTATTTCAAATTCTTCTTTGTTATAGTGTTTACTATTTTCTTTCCTACTCATCATTTCTTTCTCTCTTTGTTACAACGTTTACTATTTCCTACTCAGACTAAAATAGTTTGCACCTCAAACACAAACTATTATAACCTATAGACTAGTATAACCTACTGACTATAATAACCACCCGACTATAATAACTAACTCAGCGCCAGAAACACTCCCTAAGTTATCTTTTAAAGTCTAGTCAAATCCTTCTACACTAGGCTATTAGTTTAATTGTTATGAATGCACATCAGATATTTTTACTTTGGGTTACCATGATGGTTTTCCCCCCTTTTTTTAATGGAAGCATCCATCCACTTTTGGTACATTCATTCATGCAGGTGGGCTGAATGGAACGGAATATACCGTGACGACATCAGAAAATTTATTAAGGTAATATTGAGTGGGAACAAAGTTCTATTTCTTTCTTTCCTTCTTTTTAATAGCTGACGTGTGAGTCAATATTGGATCAAATTAGTAAACGTGGAAAGGAATTTATTCTCATAATTATATCATATTTTTAATGTGAGGCTCTTAATACTTACATAATTTTGGATTTCAGGATATAGGCAGTAATGTCATCTTCGATAGAGTTCTTGCTGAATGTGTAACATTGAAGTATTTTTCTGTAGTGGATTCTCTGATTTGTGGAGATTATACTCATGATTACTTATGAGTAGCTAATGCAAATTAAGTTCGGAAAATCTTTGAGAACCCCAGTAATTACTATAAGTGGTGTGGCAGGAAAACCAATTAATTTTATTAATCTGATTAAAGTTTCATGTTTACGAGTGAAGGTGAGCACAAGTAGGTCAACTAATGGTAAAAACTTAATAAACAGGTAACGAATTGAGACCACTAATTCTCTAACTTTGCAGTAAATGTTAGAATATTCAGCAACTAACTATAGCTCATATACAATATAGTACATCAAATTTCTTTTCTTTAGAAACTTGTCTCAGTGGTAGGATGCTAATTGAAAACTATCAGAAGGATAGTACTCTTGAGGATTAGCCCCACTGAATGTGGGGGATGTGAAATCCAGCTGGTAACTCTACCCTACAGGCTGTTCTTCCCTTTGAAAAGATATATATTTGATATGATATTAAACATTACTTCCCTTTAACTCTAAAGCCAACGGTAACATACCTTAATAATTTTTCTTAAACCTTTTCCTATTTTAGGGGGACTGTGGCATGAAGGGAAGCTTTGCAACTCGAGTAGCTGGGTCTTCTGATCTTTACAAAGTAAGTTTTGGTGTTTCTTTCGAATTATTCTTGGTGAGAATAGTCTCTAAAAAATAATTATAAACATTAAAGAAAAAAGATCTTGGCGAGAATAGATTAAGTACATTGCTTTGGTTAGAGACAAATGTGAAAGTTTCTTGTCGCACGGTTTTATATTGTAATATGGGATTATGGTGTGGAATGTTGACTATGTTACTTGGCCCTTGGTTGTATTCCAGCAATAAAATGTTGGTTCTAGTTTTGTGGATCATTCTGTATCTTCACAATTATTTAATACTTAACTTCTATCATGTTTTATCAGTAGTTATATACAAGCTCTTTGAAATATATTGTTTAGGCTTTTCACTTTTTCTACAGGTGAATAAGCGTAAGCCTTGTCATGGTATTAATTTTGTTATTGCACATGATGGATTTACACTTCGTGATCTAGTTTCTTACAATGTCAAGGTATGTATAGTTGTCATGTACCAATTTTCTTTTGAATTGATCCTCATATCTGTAATCTAACTTTGTGTTCTCGTTTGTGTAGCACAATGATGCCAATGGAGAAGGTGGAAATGATGGAAGCAATGATAACTTCAGCTGGAATTGTGGTTTTGAAGGTATGTCCAAGTAATCTATTGGTGTGTTGCTAATTAGTCATTCGAGTTCAATGTAACATTGCTTTGTTTCAATACTCGAAAATACTATCAATTTCTTTTATGTTTTTTTATTTTTTATTTTTTTTCCAGAATGAATAGAATAAAAGAATAAATAACAGACCCAACATGGGCCTTTCCAGTGATGAAGGATAAAAAGAGAGGAATTAGAGATCTCAATGAAATGGGCTTAAATGGGCCATCTTCAACATTATTTTTAATAATTGCAACATTTTTTTATTTAAATTAAATAGAATAGATTTCAGTATACTCTTTACTTGAATCGTGTTTCCTTGAAGTTTTTCAAACATGCCTCTACAAACGTTAGATTTGAACATTAGTAGAGTTCTCTAGGGAAATTTTAGGATGTTATGTTTGTCATTAGCAAGTATAGTTAGGGAAAAGTGGTTATAAATAGTGTTAGTTTTCTCCTCTTCTCCTGGTCAACCTAGATTTGAGGCCTTTTCTGAATGTACCACCCTCGTAGGTTCATAGACTCCTCATCCTGTTTTGTCTTCTTTTGGCTAAGGGAATGCCCATTTTTCTTATTGAAAGAAAAAAGGGGTGCAAGTTTTGGGGTATCAGGGGTGTGCGGAATTTGACAGTAATTTCATGGGAGAGTCCAGTCCCTTCATCGAAATGCTTGAAAATTGTATTTTTTTTTCTTTTATATTTCCATACTATTTCCTGATATTTTTTAATCTGATTTCTGGTTCCTATCACCGTTCATAGCAAACAAGTTTCCATTCAGAGTGGGCTAATAGATTGATCAGCCCTGGTGGAAAGTGCCAATACTGAAATCAGTTTAAAGACTTTAAGTATGAGAGAAATTAATCTGACAACAAGTGCTTTAAACAATCAGTTACATGGAGCAAAGTTCGGAGTTACAACCTTACTTGACCAGGATCTGTTCTAAAGTAAATTTTGGAGCTGAAATGTGCACGGGAATAGGAAGGGCGATGGGAAGACTTGATTCATGAAAGGATTGGAAGATGTCCTGTATATTACGAACTTTCGAAGATTTGGACCATGTCCAGTGCTAACCTCCCCCAATAAACATTTTATTAAACAAGCAAGATTTGATGGTAGTGACCAACAAAATTAAAATTGAGGCTGATTCGGCAAACTAAGAACATGGTATACAAGAAAGCCACAAGCACAATTCCATCCATCAAGAAGCCTCCAGATTTAAAATGAAAGAAGATTTGCCTTTGTTTTGATGGTAGAATATGGAATAAGTTCAAAATTGGTTAAAGAATGTAGAAAACGTTGATGAAATATACGGAGATGCCAAAAACAAAAATAGTTTATTTGGTTGTCTGCAAGCTCGGGGGGAACTTCTACACGGTGGAATCATCTACATTAAGATGAGGTAGGAAACAACTAAGCCGTTAAAATACCCCATGCATTCTTCTTTCTTGCCCTCCACCTTTGCCTCTTGCTTGAAATTTGAAATGCACCCGAGCTTTCTTCCTTTTTGCTCTTAGTCTTTGTCTCATGCTTGAAATTTGAACAGCGCTCTCAACCCTTGCTGCTTTCTTGCATGCTCACACAATCTTATCGCACTAATTCTTTACTCTTGAGAACATTGACATGCAAATACTTTCTATCATGGCTCACTCTACATACGGCCAACAATATGTTCTACGCCTCCACCTCTCGTGAGATCATCACTGCTATAAACAACTCCCATGGACAATATCCAAATTGCTTCTAAGAAAATTCACTGGTCATAGCTGGTGATTTGAAGACAAGTGTTAGAAACGACCTTTACGAACTTGAGAATGATGCATGTTTCAAGAATGATCTTGTTAGTAGGGGCATATTAGTTGATAGCGGGTGAGTTTTTTCAGACGGAGTCACAAATGGTAGTTATGATTTTGAGTCAGGAAAGGTAAAGGCAACCTTTGTGTTTTTCTATCAGTATGATGGGAGTGTACTGACTTTGCAGGGGAGAGAGAGCCGTCTGGTAGGTTATCAACCTTTGTGTTTTTCTGTCAGTATTATCACAACAGTATATATTCTTAATTTTCCACCTCCGTTTCTGGTGGCTATCAAATCCTAAAATTACCGAGCAATGAGGTATGCAACTTGGAACCACATTTCAACAGATTATGTTTTTAGACAAAAATATTTTTTCAAGTTAATCTGCCTCCACCCTTCATGTGCCTTGCAACATGGAAAAAACCTTTCTAGGCAGAATCATACACGTTTTAAATTCAGCTTCATCATTTACTAAATAATACTAATAATAAAGTGTCATTAGGGTCAATACATATAAATGTTTTTCAATGCCTGTTTATATGACAGGAGAAACAGAAGATACAAGCATTAACGCTTTACGTGCAAGGCAAATGAAAAACTTCCATTTGGCTTTAATGACATCTCAGGTATAACATTTCCAAAACCCTTCCCTCAATAGTTATAGTAAGCTTCGAAGTCCATAGATCTGGATGTTCTTTTTCATTTCATTTCATTTTTTTTTTACAAAGTTAGATTGAGTAGAGAATATTCTTTTACACTGTAACATGAAATTCTGGATCCACCACTCATTACACACCTAAAAAAAATCGTTTTTTATTTGTTTCTGTTCATCATAGTGAAGCTTTATATGTCTCTGGTGGCATGTACTTTTTCTTATACTCTCTCTAACGTGGTTCTGGAATTCTGTTAGTTCTATCTTCCCTCTTATTTAAATTATGGGAACTAATGTTAGTTTCTGGTTGCTTATTTTCAGGGAACGCCAATGATGTTAATGGGGGATGAGTACGGGCACACTCGTTATGGAAATAACAATAGCTATGGACATGATAACGCTCTTAACCATTTCCTTTGGGAACAGGTCTTTGTTATGTCACTAACCTTCTATAGCCCTTGTATAGTCGAAGTTCATATAACAACTATTTATGTTTTTGGTCTGTAGTTAGAGGCACGAAAGAGGGATCACTTCAGATTTTTCTCTGAAGTGATAAAGTTTCGGAGGAAGCATCCCCATTTATTCAGCCGGGAAAATTTTCTAAGCAAGGTGATTTCTCTTCACTTATGCTCCCCATTCCTCTGTTTTGTTTTGTTTTGGTTTTTTTTTTTTTTTTTTACCCTTCAAATATGCTCCCCCTGGGATTAACAGAGGATTCATTTCAGAATGATATAACTTGGCACGAAAGCAATTGGGACAATCCTGAAAGTAAATTTCTTGCCTACACGTAAGCACTCTTGAATTCTGCAAAACTTGAAAATTCATATTTGTTTCGCCAAGTCCATTATGCATGAGGTATGAATTTCAGCAGCATTTGCATGCTGATTTTATTATTGAATCAGCAAAGTCAGCACACTCCCATCATATTTTGTTTGTACGGAGCAACTAATATAAAGAACGTGTATGGTTGATTGAGTATCAATAAACCCTAAACCCTTAGACAAGTATCAACAAACCCTAAACCCTTGATTGAGTATTACTTACCTTAGATATTGAACATTAACTTCTCTTATGAATTCAACTAGGATAGTATTGAGCTTGTTCTGAACAGCCACCTTGTCAAAACCAATTGAAGGAATTGATTAAATAGCTAAGATTTTGATGCATAGGTTGTGTTAATGTTTTAAACGCCTATTGGCCTTTTCATTGGTATGCATAGGAGGATTTGATTCTGTACATTGTGATTTTATCATATTCTATAATCCGAGCAGTACAGGTTTGTCATATATATACACACATACTCACTTAACTGGGAACAGGAGTCGGTGAAATTTTATGTTCTGATTAGCCCACCTTCTTGGGATTGGCTTCGTGTAATGTGGATATGCACAAAAATGGTCATGCAAACCTTTTAGGGAACTTGTGTGTTTTATGTTTTGAAGCTTACTGGTATTTACAGGCTTCATGATGATAATGGAGAAGACGTTTACTTGGCATTCAATGCTCATGATTATTTTGTCAATGTTTCGTTACCCTCTCCTCCAACAAATCGAAGCTGGTTTCGTGTGGTTAGTTTCTCCCTTGCCATTTTTTTGCTTCTAATTTGTTGGTACTCGTCTTTTTCCAAAACATGGAAGTTCGAATCAATTCTGCACATCTTTACAATTCAATCTCAACATACAACACATCCTGCAACAAATTTAGCTTGGTAGAACTAATAGTTACATTTTAATGCATAATTTTCAAACAATGTTCGTGAATGAAATTTTGTGGCTTTTCCTTTCTCCTGCAGGTGGACACCAATCTGGAGTCTCCCCATGACTTTGTACTGGATGGCATTCCGGGCGTTGGAAACACCTATAATTTGGCTCCCTATTCCTCAATTCTTCTGAAAGCCAAGTCAGAAAACGAACTTCTTTGA

mRNA sequence

ATGGCCATTCCAAACTCCCTTCCACCTGCCAAGCCAAAAAAAACCAGCACTACTACAGGTAAAAAACCCAAGCTACAAAGAGAACTCCTCGGCTTACACTCATCGATTCACTATGATAAGAAGCAACATTGGCCATCGGGAGGGTACTTCGGAAGATCAATGAAATTCATTTCTTGGAACGTTCGGGACTCATTCTGGAGGAAACGTACTTTGGTTAAAAAGCTCATCCAGCAACATAATCCAGGAGAAACAGAAGATACAAGCATTAACGCTTTACGTGCAAGGCAAATGAAAAACTTCCATTTGGCTTTAATGACATCTCAGGGAACGCCAATGATGTTAATGGGGGATGAGTACGGGCACACTCGTTATGGAAATAACAATAGCTATGGACATGATAACGCTCTTAACCATTTCCTTTGGGAACAGTTAGAGGCACGAAAGAGGGATCACTTCAGATTTTTCTCTGAAGTGATAAAGTTTCGGAGGAAGCATCCCCATTTATTCAGCCGGGAAAATTTTCTAAGCAAGAATGATATAACTTGGCACGAAAGCAATTGGGACAATCCTGAAAGTAAATTTCTTGCCTACACGCTTCATGATGATAATGGAGAAGACGTTTACTTGGCATTCAATGCTCATGATTATTTTGTCAATGTTTCGTTACCCTCTCCTCCAACAAATCGAAGCTGGTTTCGTGTGGTGGACACCAATCTGGAGTCTCCCCATGACTTTGTACTGGATGGCATTCCGGGCGTTGGAAACACCTATAATTTGGCTCCCTATTCCTCAATTCTTCTGAAAGCCAAGTCAGAAAACGAACTTCTTTGA

Coding sequence (CDS)

ATGGCCATTCCAAACTCCCTTCCACCTGCCAAGCCAAAAAAAACCAGCACTACTACAGGTAAAAAACCCAAGCTACAAAGAGAACTCCTCGGCTTACACTCATCGATTCACTATGATAAGAAGCAACATTGGCCATCGGGAGGGTACTTCGGAAGATCAATGAAATTCATTTCTTGGAACGTTCGGGACTCATTCTGGAGGAAACGTACTTTGGTTAAAAAGCTCATCCAGCAACATAATCCAGGAGAAACAGAAGATACAAGCATTAACGCTTTACGTGCAAGGCAAATGAAAAACTTCCATTTGGCTTTAATGACATCTCAGGGAACGCCAATGATGTTAATGGGGGATGAGTACGGGCACACTCGTTATGGAAATAACAATAGCTATGGACATGATAACGCTCTTAACCATTTCCTTTGGGAACAGTTAGAGGCACGAAAGAGGGATCACTTCAGATTTTTCTCTGAAGTGATAAAGTTTCGGAGGAAGCATCCCCATTTATTCAGCCGGGAAAATTTTCTAAGCAAGAATGATATAACTTGGCACGAAAGCAATTGGGACAATCCTGAAAGTAAATTTCTTGCCTACACGCTTCATGATGATAATGGAGAAGACGTTTACTTGGCATTCAATGCTCATGATTATTTTGTCAATGTTTCGTTACCCTCTCCTCCAACAAATCGAAGCTGGTTTCGTGTGGTGGACACCAATCTGGAGTCTCCCCATGACTTTGTACTGGATGGCATTCCGGGCGTTGGAAACACCTATAATTTGGCTCCCTATTCCTCAATTCTTCTGAAAGCCAAGTCAGAAAACGAACTTCTTTGA

Protein sequence

MAIPNSLPPAKPKKTSTTTGKKPKLQRELLGLHSSIHYDKKQHWPSGGYFGRSMKFISWNVRDSFWRKRTLVKKLIQQHNPGETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLWEQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESNWDNPESKFLAYTLHDDNGEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPGVGNTYNLAPYSSILLKAKSENELL
Homology
[Close]
BLAST of HG10013463 vs. NCBI nr
Match: XP_011652565.1 (isoamylase 3, chloroplastic isoform X1 [Cucumis sativus] >KGN60235.1 hypothetical protein Csa_002537 [Cucumis sativus])

HSP 1 Score: 390.6 bits (1002), Expect = 1.1e-104
Identity = 183/195 (93.85%), Postives = 189/195 (96.92%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           GETEDTSI ALR RQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW
Sbjct: 581 GETEDTSIKALRTRQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 640

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESNWDNPESKFLAYTLHD 201
           EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFL+KNDITWHESNWDNPESKFLAYTLHD
Sbjct: 641 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLNKNDITWHESNWDNPESKFLAYTLHD 700

Query: 202 DNGEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPGVGNTYNLAP 261
           DNGEDVYLAFNAH+YFVNVSLPSPPT R WFRVVDTNLESPHDFVLDGIPGVG++YN+AP
Sbjct: 701 DNGEDVYLAFNAHEYFVNVSLPSPPTKRKWFRVVDTNLESPHDFVLDGIPGVGSSYNVAP 760

Query: 262 YSSILLKAKSENELL 277
           YSSILLKA  EN+LL
Sbjct: 761 YSSILLKANLENDLL 775

[Close]
BLAST of HG10013463 vs. NCBI nr
Match: XP_011652566.1 (isoamylase 3, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 390.6 bits (1002), Expect = 1.1e-104
Identity = 183/195 (93.85%), Postives = 189/195 (96.92%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           GETEDTSI ALR RQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW
Sbjct: 491 GETEDTSIKALRTRQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 550

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESNWDNPESKFLAYTLHD 201
           EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFL+KNDITWHESNWDNPESKFLAYTLHD
Sbjct: 551 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLNKNDITWHESNWDNPESKFLAYTLHD 610

Query: 202 DNGEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPGVGNTYNLAP 261
           DNGEDVYLAFNAH+YFVNVSLPSPPT R WFRVVDTNLESPHDFVLDGIPGVG++YN+AP
Sbjct: 611 DNGEDVYLAFNAHEYFVNVSLPSPPTKRKWFRVVDTNLESPHDFVLDGIPGVGSSYNVAP 670

Query: 262 YSSILLKAKSENELL 277
           YSSILLKA  EN+LL
Sbjct: 671 YSSILLKANLENDLL 685

[Close]
BLAST of HG10013463 vs. NCBI nr
Match: XP_008466196.1 (PREDICTED: isoamylase 3, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 388.3 bits (996), Expect = 5.7e-104
Identity = 182/188 (96.81%), Postives = 186/188 (98.94%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           GETEDTSI ALR+RQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW
Sbjct: 491 GETEDTSIKALRSRQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 550

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESNWDNPESKFLAYTLHD 201
           EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFL+KNDITWHESNWDNPESKFLAYTLHD
Sbjct: 551 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLNKNDITWHESNWDNPESKFLAYTLHD 610

Query: 202 DNGEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPGVGNTYNLAP 261
           DNGEDVYLAFNAHDYFVNVSLPSPPTNR WFRVVDTNLESPHDFVLDGIPGVG++YNLAP
Sbjct: 611 DNGEDVYLAFNAHDYFVNVSLPSPPTNRRWFRVVDTNLESPHDFVLDGIPGVGSSYNLAP 670

Query: 262 YSSILLKA 270
           YSSILLKA
Sbjct: 671 YSSILLKA 678

[Close]
BLAST of HG10013463 vs. NCBI nr
Match: XP_008466194.1 (PREDICTED: isoamylase 3, chloroplastic isoform X1 [Cucumis melo] >XP_008466195.1 PREDICTED: isoamylase 3, chloroplastic isoform X1 [Cucumis melo] >TYK31297.1 isoamylase 3 [Cucumis melo var. makuwa])

HSP 1 Score: 388.3 bits (996), Expect = 5.7e-104
Identity = 182/188 (96.81%), Postives = 186/188 (98.94%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           GETEDTSI ALR+RQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW
Sbjct: 580 GETEDTSIKALRSRQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 639

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESNWDNPESKFLAYTLHD 201
           EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFL+KNDITWHESNWDNPESKFLAYTLHD
Sbjct: 640 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLNKNDITWHESNWDNPESKFLAYTLHD 699

Query: 202 DNGEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPGVGNTYNLAP 261
           DNGEDVYLAFNAHDYFVNVSLPSPPTNR WFRVVDTNLESPHDFVLDGIPGVG++YNLAP
Sbjct: 700 DNGEDVYLAFNAHDYFVNVSLPSPPTNRRWFRVVDTNLESPHDFVLDGIPGVGSSYNLAP 759

Query: 262 YSSILLKA 270
           YSSILLKA
Sbjct: 760 YSSILLKA 767

[Close]
BLAST of HG10013463 vs. NCBI nr
Match: KAA0038687.1 (isoamylase 3 [Cucumis melo var. makuwa])

HSP 1 Score: 388.3 bits (996), Expect = 5.7e-104
Identity = 182/188 (96.81%), Postives = 186/188 (98.94%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           GETEDTSI ALR+RQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW
Sbjct: 581 GETEDTSIKALRSRQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 640

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESNWDNPESKFLAYTLHD 201
           EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFL+KNDITWHESNWDNPESKFLAYTLHD
Sbjct: 641 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLNKNDITWHESNWDNPESKFLAYTLHD 700

Query: 202 DNGEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPGVGNTYNLAP 261
           DNGEDVYLAFNAHDYFVNVSLPSPPTNR WFRVVDTNLESPHDFVLDGIPGVG++YNLAP
Sbjct: 701 DNGEDVYLAFNAHDYFVNVSLPSPPTNRRWFRVVDTNLESPHDFVLDGIPGVGSSYNLAP 760

Query: 262 YSSILLKA 270
           YSSILLKA
Sbjct: 761 YSSILLKA 768

[Close]
BLAST of HG10013463 vs. ExPASy Swiss-Prot
Match: Q9M0S5 (Isoamylase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ISA3 PE=1 SV=2)

HSP 1 Score: 287.3 bits (734), Expect = 1.8e-76
Identity = 132/190 (69.47%), Postives = 157/190 (82.63%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           GET D  I +LR RQMKNFHLALM SQGTPMMLMGDEYGHTRYGNNNSYGHD +LN+F W
Sbjct: 576 GETGDAHIKSLRTRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTSLNNFQW 635

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESNWDNPESKFLAYTLHD 201
           ++L+A+K++HFRFFSEVIKFR  H H+   ENFL++ +ITWHE NWDN ESKFLA+TLHD
Sbjct: 636 KELDAKKQNHFRFFSEVIKFRHSH-HVLKHENFLTQGEITWHEDNWDNSESKFLAFTLHD 695

Query: 202 D-NGEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPGVGNTYNLA 261
              G D+Y+AFNAHDYFV   +P PP  + WFRV DTNLESP DFV +G+ GV +TYN+A
Sbjct: 696 GIGGRDIYVAFNAHDYFVKALIPQPPPGKQWFRVADTNLESPDDFVREGVAGVADTYNVA 755

Query: 262 PYSSILLKAK 271
           P+SSILL++K
Sbjct: 756 PFSSILLQSK 764

[Close]
BLAST of HG10013463 vs. ExPASy Swiss-Prot
Match: B9G434 (Isoamylase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ISA3 PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.1e-73
Identity = 129/190 (67.89%), Postives = 155/190 (81.58%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           GET D ++ +LR+RQMKNFH+ALM SQGTPMMLMGDEYGHTRYGNNNSYGHD  +N+F W
Sbjct: 593 GETNDLNVLSLRSRQMKNFHVALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTCINNFQW 652

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESNWDNPESKFLAYTLHD 201
           EQLE R+  HFRFFSE+IKFR  +P +  R+ FL+KND+TWHE  W+N ESKFLA+T+HD
Sbjct: 653 EQLEQRRDGHFRFFSEMIKFRHSNP-ILRRDRFLNKNDVTWHEDCWENQESKFLAFTVHD 712

Query: 202 DN-GEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPGVGNTYNLA 261
            N G D+YLAFNAHDYFV+  +P PP ++ W RVVDTNLESP+D V +G+P  G  Y +A
Sbjct: 713 HNSGGDIYLAFNAHDYFVDAVIPPPPHHKCWNRVVDTNLESPNDIVPEGVPFTGPKYRIA 772

Query: 262 PYSSILLKAK 271
           PYSSILLKAK
Sbjct: 773 PYSSILLKAK 781

[Close]
BLAST of HG10013463 vs. ExPASy Swiss-Prot
Match: O04196 (Isoamylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ISA1 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.5e-30
Identity = 80/203 (39.41%), Postives = 113/203 (55.67%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           G+    S+  LR RQM+NF ++LM SQG PM+ MGDEYGHT+ GNNN+Y HDN +N+F W
Sbjct: 576 GDFASISVKRLRKRQMRNFFVSLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYMNYFRW 635

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHE-----SNWDNPESKFLA 201
           ++ E    D FRF   +IKFR +   L    +F +   + WH       NW +  S+F+A
Sbjct: 636 DKKEEAHSDFFRFCRILIKFRDECESL-GLNDFPTAKRLQWHGLAPEIPNW-SETSRFVA 695

Query: 202 YTLHDDNGEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPG---- 261
           ++L D   +++Y+AFN       VSLP+ P  R W   VDT+  SP+D +   +P     
Sbjct: 696 FSLVDSVKKEIYVAFNTSHLATLVSLPNRPGYR-WEPFVDTSKPSPYDCITPDLPERETA 755

Query: 262 --------VGNTYNLAPYSSILL 268
                     N Y +  YSSI+L
Sbjct: 756 MKQYRHFLDANVYPMLSYSSIIL 775

[Close]
BLAST of HG10013463 vs. ExPASy Swiss-Prot
Match: D0TZF0 (Isoamylase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ISA1 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.2e-29
Identity = 78/208 (37.50%), Postives = 115/208 (55.29%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           GE    S+  LR RQM+NF ++LM SQG PM  MGDEYGHT+ GNNN+Y HD+ +N+F W
Sbjct: 599 GEFAGLSVKRLRKRQMRNFFVSLMVSQGVPMFYMGDEYGHTKGGNNNTYCHDHYVNYFRW 658

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESNWDNPE----SKFLAY 201
           ++ E    D  RF S + KFR++   L    +F +   + WH      P+    S+F+A+
Sbjct: 659 DKKE-ESSDLQRFCSLMTKFRKQCESL-GLADFPTAQRLHWHGHQPGKPDWSETSRFVAF 718

Query: 202 TLHDDNGEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPG----- 261
           +  D+   ++Y+AFNA      V LP  P  R W  +VDT   +P+DF+ D +P      
Sbjct: 719 STKDETKGEIYVAFNASHLPAVVGLPERPGYR-WEPLVDTGKPAPYDFLTDDLPDRAHAV 778

Query: 262 -------VGNTYNLAPYSSILLKAKSEN 274
                    N Y +  YSSI+L+ + ++
Sbjct: 779 HLFSHFLNSNLYPMLSYSSIILELQPDD 803

[Close]
BLAST of HG10013463 vs. ExPASy Swiss-Prot
Match: P0A4Y5 (Glycogen operon protein GlgX homolog OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=glgX PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.9e-16
Identity = 67/186 (36.02%), Postives = 85/186 (45.70%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           G T+D  I ALRARQM+N    LM SQGTPM+  GDE G T+YGNNN Y  D+ L+   W
Sbjct: 508 GPTDDPDILALRARQMRNMWATLMVSQGTPMIAHGDEIGRTQYGNNNVYCQDSELSWMDW 567

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFL---------SKNDITW---------H 201
             ++ +  D   F  +    R+ H  +F R  F             DI W         H
Sbjct: 568 SLVD-KNADLLAFARKATTLRKNH-KVFRRRRFFEGEPIRSGDEVRDIAWLTPSGREMTH 627

Query: 202 ES---NWDNPESKFL---AYTLHDDNGEDV-----YLAFNAHDYFVNVSLPSPPTNRSWF 239
           E     +D   + FL   A T  D  GE V      L FNAHD+ V   +P     + W 
Sbjct: 628 EDWGRGFDRCVAVFLNGEAITAPDARGERVVDDSFLLCFNAHDHDVEFVMPHDGYAQQWT 687

[Close]
BLAST of HG10013463 vs. ExPASy TrEMBL
Match: A0A0A0LE02 (Aamy domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889910 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 5.5e-105
Identity = 183/195 (93.85%), Postives = 189/195 (96.92%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           GETEDTSI ALR RQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW
Sbjct: 581 GETEDTSIKALRTRQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 640

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESNWDNPESKFLAYTLHD 201
           EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFL+KNDITWHESNWDNPESKFLAYTLHD
Sbjct: 641 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLNKNDITWHESNWDNPESKFLAYTLHD 700

Query: 202 DNGEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPGVGNTYNLAP 261
           DNGEDVYLAFNAH+YFVNVSLPSPPT R WFRVVDTNLESPHDFVLDGIPGVG++YN+AP
Sbjct: 701 DNGEDVYLAFNAHEYFVNVSLPSPPTKRKWFRVVDTNLESPHDFVLDGIPGVGSSYNVAP 760

Query: 262 YSSILLKAKSENELL 277
           YSSILLKA  EN+LL
Sbjct: 761 YSSILLKANLENDLL 775

[Close]
BLAST of HG10013463 vs. ExPASy TrEMBL
Match: A0A1S3CS22 (isoamylase 3, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503684 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.7e-104
Identity = 182/188 (96.81%), Postives = 186/188 (98.94%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           GETEDTSI ALR+RQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW
Sbjct: 580 GETEDTSIKALRSRQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 639

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESNWDNPESKFLAYTLHD 201
           EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFL+KNDITWHESNWDNPESKFLAYTLHD
Sbjct: 640 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLNKNDITWHESNWDNPESKFLAYTLHD 699

Query: 202 DNGEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPGVGNTYNLAP 261
           DNGEDVYLAFNAHDYFVNVSLPSPPTNR WFRVVDTNLESPHDFVLDGIPGVG++YNLAP
Sbjct: 700 DNGEDVYLAFNAHDYFVNVSLPSPPTNRRWFRVVDTNLESPHDFVLDGIPGVGSSYNLAP 759

Query: 262 YSSILLKA 270
           YSSILLKA
Sbjct: 760 YSSILLKA 767

[Close]
BLAST of HG10013463 vs. ExPASy TrEMBL
Match: A0A5A7TAT5 (Isoamylase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G002290 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.7e-104
Identity = 182/188 (96.81%), Postives = 186/188 (98.94%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           GETEDTSI ALR+RQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW
Sbjct: 581 GETEDTSIKALRSRQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 640

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESNWDNPESKFLAYTLHD 201
           EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFL+KNDITWHESNWDNPESKFLAYTLHD
Sbjct: 641 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLNKNDITWHESNWDNPESKFLAYTLHD 700

Query: 202 DNGEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPGVGNTYNLAP 261
           DNGEDVYLAFNAHDYFVNVSLPSPPTNR WFRVVDTNLESPHDFVLDGIPGVG++YNLAP
Sbjct: 701 DNGEDVYLAFNAHDYFVNVSLPSPPTNRRWFRVVDTNLESPHDFVLDGIPGVGSSYNLAP 760

Query: 262 YSSILLKA 270
           YSSILLKA
Sbjct: 761 YSSILLKA 768

[Close]
BLAST of HG10013463 vs. ExPASy TrEMBL
Match: A0A5D3E5B0 (Isoamylase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005950 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.7e-104
Identity = 182/188 (96.81%), Postives = 186/188 (98.94%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           GETEDTSI ALR+RQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW
Sbjct: 580 GETEDTSIKALRSRQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 639

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESNWDNPESKFLAYTLHD 201
           EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFL+KNDITWHESNWDNPESKFLAYTLHD
Sbjct: 640 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLNKNDITWHESNWDNPESKFLAYTLHD 699

Query: 202 DNGEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPGVGNTYNLAP 261
           DNGEDVYLAFNAHDYFVNVSLPSPPTNR WFRVVDTNLESPHDFVLDGIPGVG++YNLAP
Sbjct: 700 DNGEDVYLAFNAHDYFVNVSLPSPPTNRRWFRVVDTNLESPHDFVLDGIPGVGSSYNLAP 759

Query: 262 YSSILLKA 270
           YSSILLKA
Sbjct: 760 YSSILLKA 767

[Close]
BLAST of HG10013463 vs. ExPASy TrEMBL
Match: A0A1S3CQN6 (isoamylase 3, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503684 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.7e-104
Identity = 182/188 (96.81%), Postives = 186/188 (98.94%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           GETEDTSI ALR+RQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW
Sbjct: 491 GETEDTSIKALRSRQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 550

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESNWDNPESKFLAYTLHD 201
           EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFL+KNDITWHESNWDNPESKFLAYTLHD
Sbjct: 551 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLNKNDITWHESNWDNPESKFLAYTLHD 610

Query: 202 DNGEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPGVGNTYNLAP 261
           DNGEDVYLAFNAHDYFVNVSLPSPPTNR WFRVVDTNLESPHDFVLDGIPGVG++YNLAP
Sbjct: 611 DNGEDVYLAFNAHDYFVNVSLPSPPTNRRWFRVVDTNLESPHDFVLDGIPGVGSSYNLAP 670

Query: 262 YSSILLKA 270
           YSSILLKA
Sbjct: 671 YSSILLKA 678

[Close]
BLAST of HG10013463 vs. TAIR 10
Match: AT4G09020.1 (isoamylase 3 )

HSP 1 Score: 287.3 bits (734), Expect = 1.3e-77
Identity = 132/190 (69.47%), Postives = 157/190 (82.63%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           GET D  I +LR RQMKNFHLALM SQGTPMMLMGDEYGHTRYGNNNSYGHD +LN+F W
Sbjct: 576 GETGDAHIKSLRTRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTSLNNFQW 635

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESNWDNPESKFLAYTLHD 201
           ++L+A+K++HFRFFSEVIKFR  H H+   ENFL++ +ITWHE NWDN ESKFLA+TLHD
Sbjct: 636 KELDAKKQNHFRFFSEVIKFRHSH-HVLKHENFLTQGEITWHEDNWDNSESKFLAFTLHD 695

Query: 202 D-NGEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPGVGNTYNLA 261
              G D+Y+AFNAHDYFV   +P PP  + WFRV DTNLESP DFV +G+ GV +TYN+A
Sbjct: 696 GIGGRDIYVAFNAHDYFVKALIPQPPPGKQWFRVADTNLESPDDFVREGVAGVADTYNVA 755

Query: 262 PYSSILLKAK 271
           P+SSILL++K
Sbjct: 756 PFSSILLQSK 764

[Close]
BLAST of HG10013463 vs. TAIR 10
Match: AT2G39930.1 (isoamylase 1 )

HSP 1 Score: 134.0 bits (336), Expect = 1.8e-31
Identity = 80/203 (39.41%), Postives = 113/203 (55.67%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           G+    S+  LR RQM+NF ++LM SQG PM+ MGDEYGHT+ GNNN+Y HDN +N+F W
Sbjct: 576 GDFASISVKRLRKRQMRNFFVSLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYMNYFRW 635

Query: 142 EQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHE-----SNWDNPESKFLA 201
           ++ E    D FRF   +IKFR +   L    +F +   + WH       NW +  S+F+A
Sbjct: 636 DKKEEAHSDFFRFCRILIKFRDECESL-GLNDFPTAKRLQWHGLAPEIPNW-SETSRFVA 695

Query: 202 YTLHDDNGEDVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLESPHDFVLDGIPG---- 261
           ++L D   +++Y+AFN       VSLP+ P  R W   VDT+  SP+D +   +P     
Sbjct: 696 FSLVDSVKKEIYVAFNTSHLATLVSLPNRPGYR-WEPFVDTSKPSPYDCITPDLPERETA 755

Query: 262 --------VGNTYNLAPYSSILL 268
                     N Y +  YSSI+L
Sbjct: 756 MKQYRHFLDANVYPMLSYSSIIL 775

[Close]
BLAST of HG10013463 vs. TAIR 10
Match: AT1G03310.2 (debranching enzyme 1 )

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-14
Identity = 61/215 (28.37%), Postives = 96/215 (44.65%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           G T  +++   R +Q++NF      S G P++ MGDE G +  G+        +   F W
Sbjct: 666 GATNKSAVLQRRLKQIRNFLFIQYISLGVPVLNMGDECGISTRGSPLL----ESRKPFDW 725

Query: 142 EQL-EARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESN-----WDNPESKFL 201
             L  A      +F S +   R +   +F R +FL   +I W+ ++     W++P SKFL
Sbjct: 726 NLLASAFGTQITQFISFMTSVRARRSDVFQRRDFLKPENIVWYANDQTTPKWEDPASKFL 785

Query: 202 AYTLHDDNGE---------------DVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLE 261
           A  +  ++ E               D+++ FNA D+  +V LPS P    W R+VDT L 
Sbjct: 786 ALEIKSESEEEETASLAEPNEPKSNDLFIGFNASDHPESVVLPSLPDGSKWRRLVDTALP 845

Query: 262 SPHDFVLDGIPGVGN-------TYNLAPYSSILLK 269
            P  F ++G   V          Y + PYS  L +
Sbjct: 846 FPGFFSVEGETVVAEEPLQQLVVYEMKPYSCTLFE 876

[Close]
BLAST of HG10013463 vs. TAIR 10
Match: AT1G03310.1 (debranching enzyme 1 )

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-14
Identity = 61/215 (28.37%), Postives = 96/215 (44.65%), Query Frame = 0 

Query: 82  GETEDTSINALRARQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLW 141
           G T  +++   R +Q++NF      S G P++ MGDE G +  G+        +   F W
Sbjct: 666 GATNKSAVLQRRLKQIRNFLFIQYISLGVPVLNMGDECGISTRGSPLL----ESRKPFDW 725

Query: 142 EQL-EARKRDHFRFFSEVIKFRRKHPHLFSRENFLSKNDITWHESN-----WDNPESKFL 201
             L  A      +F S +   R +   +F R +FL   +I W+ ++     W++P SKFL
Sbjct: 726 NLLASAFGTQITQFISFMTSVRARRSDVFQRRDFLKPENIVWYANDQTTPKWEDPASKFL 785

Query: 202 AYTLHDDNGE---------------DVYLAFNAHDYFVNVSLPSPPTNRSWFRVVDTNLE 261
           A  +  ++ E               D+++ FNA D+  +V LPS P    W R+VDT L 
Sbjct: 786 ALEIKSESEEEETASLAEPNEPKSNDLFIGFNASDHPESVVLPSLPDGSKWRRLVDTALP 845

Query: 262 SPHDFVLDGIPGVGN-------TYNLAPYSSILLK 269
            P  F ++G   V          Y + PYS  L +
Sbjct: 846 FPGFFSVEGETVVAEEPLQQLVVYEMKPYSCTLFE 876

The following BLAST results are available for this feature:
BLAST of HG10013463 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011652565.11.1e-10493.85isoamylase 3, chloroplastic isoform X1 [Cucumis sativus] >KGN60235.1 hypothetica... [more]
XP_011652566.11.1e-10493.85isoamylase 3, chloroplastic isoform X2 [Cucumis sativus][more]
XP_008466196.15.7e-10496.81PREDICTED: isoamylase 3, chloroplastic isoform X2 [Cucumis melo][more]
XP_008466194.15.7e-10496.81PREDICTED: isoamylase 3, chloroplastic isoform X1 [Cucumis melo] >XP_008466195.1... [more]
KAA0038687.15.7e-10496.81isoamylase 3 [Cucumis melo var. makuwa][more]
BLAST of HG10013463 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M0S51.8e-7669.47Isoamylase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ISA3 PE=1 SV=2[more]
B9G4343.1e-7367.89Isoamylase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ISA3 PE=... [more]
O041962.5e-3039.41Isoamylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ISA1 PE=1 SV=1[more]
D0TZF06.2e-2937.50Isoamylase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ISA1 PE=... [more]
P0A4Y57.9e-1636.02Glycogen operon protein GlgX homolog OS=Mycobacterium bovis (strain ATCC BAA-935... [more]
BLAST of HG10013463 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LE025.5e-10593.85Aamy domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889910 PE=4 S... [more]
A0A1S3CS222.7e-10496.81isoamylase 3, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503684 P... [more]
A0A5A7TAT52.7e-10496.81Isoamylase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G002290 P... [more]
A0A5D3E5B02.7e-10496.81Isoamylase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005950 ... [more]
A0A1S3CQN62.7e-10496.81isoamylase 3, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503684 P... [more]
BLAST of HG10013463 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G09020.11.3e-7769.47isoamylase 3 [more]
AT2G39930.11.8e-3139.41isoamylase 1 [more]
AT1G03310.21.2e-1428.37debranching enzyme 1 [more]
AT1G03310.11.2e-1428.37debranching enzyme 1 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.80Glycosidasescoord: 64..177
e-value: 3.8E-32
score: 113.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR43002GLYCOGEN DEBRANCHING ENZYMEcoord: 82..270
NoneNo IPR availableSUPERFAMILY51011Glycosyl hydrolase domaincoord: 177..270
IPR013780Glycosyl hydrolase, all-betaGENE3D2.60.40.1180coord: 178..275
e-value: 8.3E-28
score: 98.8
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 78..169

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10013463.1HG10013463.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005977 glycogen metabolic process
molecular_function GO:0019156 isoamylase activity