HG10013455 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013455
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	t-SNARE coiled-coil homology domain-containing protein
Location	Chr02: 1684029 .. 1688211 (+)
RNA-Seq Expression	HG10013455
Synteny	HG10013455

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCTTTCTACAATGGCAACGCCGCCCCATATCGCTCCAGGTATTTCTCGTTCTTCTGTCATGTTAAATTCCCAGTATATTTCCAGGAATTGTATAGGTTTTGCAAGGATTAGGAGTTTGTATCATTTGTCTCGTGGAATTGTTCAAATCGTTTATATATTTACCGGCGTTAAGAATGATGGTTACTCAATTCATATCACTCAAGTGCAATCGTCCTTTGTTTTGGGTATTCAGGGAGGGGCTTAGCACAAGACCGGCGGCCGCATCCGATGAAATTCAACTTCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTTGGTCTCCACAGCCAAGTTAAAAGGCTTAGAAATGTGAGTATAAAGTTTTTTCGTTAATCTATGGTACGGCTTTATACTTAGGTTTATTGAATTGCAAACTAGAACGCGCAGCTACCCGATGCTGGCATCTTCATCGGATAACTAGAAAAAAAGTACTTGACAGAAATCTTCAGATTTCTTTCGGTGCTCCAATAATATTTGAATTTAGCTATGTTCGAGGCTGATCTATCTGTATTGGTACTCTTGGAATTTGCATTGCTCGTGGTTCCTTTCTTATTTGAGTTTATGAGCTGTACGCTACGTAATTGATACATTTTCACGTGGTATAGCTGTATTCTGCGTGCTTATCTTTGGATTTCATTATAAAGGTGGTAACGGCCACAGGTGACTGGCATGGTTTTATTTCTGTGAAGTTTCGTGATTTGCCTCCAATCTTTTTATATAAAATACCCGACTTCTTGTTATTTAAGAAAAATGGGATATATGAGACATTGACATTCAACCGGTACAAGCAGAATCCAATTTTACGAGTGCTCGTTCTTGCATTTCTAGTCTATTGGCTCATCACCGTTCAAAATGTTTTATAGGCAATGAAAGAAATGCATGGTAATAATGTAACAAGCATATCAATATAAATTATAATTCTTGGAAGAATCTATTGGGTATTGATTTCCAATATAAGCATCTATCTGACAGGATTCATCGACTACTGTAATTGACCTGGAGGCTAATTCTCTGTCATTCTATTTGGTAGCTGCAATTATGTTCTCACCAAACTCTTAATTATACATATACATATACATATATATGTATACATATACATATATATATCCGTGAGTGTCAAGACCAGCTTACGCACACCTCGACTAATCTCAGGGGACAACTTGCCTGACCCTACAACATTTGGGTGCCAAAGAAACTCGTAAGAAATTAATTCCTAGGTAGGTGGCCATCATGGATTGAACCCATGACCTCTTTTAGCCATTTATTGAGACTATGCTCCCTTTTTACCACTAGGCCAACTCATGATGGTTTTCACCAAACTCTTAATTCTGACTATTTTTCAGGAGTAGCTTCATGTTTCCTCCTTGTAACTTCCTCTCCTTTTAGCTGTTTGATGAGGAGGTCTGATCTATCACAAGGCCCCATATAGGAGCTAGGGGTTGGTTGCGATTGATACCCTACTTCAAGGAGGTTCCTGATATAAGGATCCTCTTTCCTTGGAACACTCGATGGAAACGTTCCTTAGGGAGGAGGGGAGGAGCAAAGGGAGGAAAGAAGTAAATAAAGTCAGTTTCTTTTCTTTCTTTCTTCTTTTTTTAAGAAGAGAAACAAGTTTCATTGATAGGAGAAACCCCAAAGCACCTAAAGGTGAATTACATAAAAATTCTCCAATTAGAAATCAGATGTTTTGGAAGTCATAAGTTCAATCATTAGTCTCTGCTCACTGTCTACCTTTTTACCATTTTTCAAGTCTCCAAAAATGTCTGACAATTGCCTACTGCCTTAAATACACTAGGTTTAGAGCATAATGATTACTCGATTAGCCATTAGGCACTTATTGGAAAGTGCCTAGGCACTGAACACGACATTAAGAATTTTTTGTGCTTCCACTTTCTAAAGTTCTGGTGCCAACGTGCTGCTCTTTTGAGCCCTACAACTTGGCTTCGTCCTTTCACTTTTGGTGCATGATACTGGGCCTAATTGCGTGCACTTTGGTTAGGATTTAGGAGTACCATATCTCAGCCCCAGAAGCGGTAAAAACTACAAGTCACTTTTTCGTACAGTCCTATAAAATGAACTAGGATGCAAAAATTGAACTGATAAAATTCTTTATAACTAACTATATGCCTATAGAAAGATATCCAGGCTTTTTTTTTTTAAGAAAGATATCCAGTTATTGAGCGTATTCTTTCATTTTTTTCCTCAGTGAAAGGTTGTTTATTCATAAAAAAATGGAAAATAATCTAGTTGTTGAGTGTGAATCTCACTTTTGGTATTTATAGCATGTTATGATTCTACACTTAAAATTATGATATATTGCATATCATAATGAAATCAATAGATTTTTAAGTATGACTTTTCTTTTGGGTAAGAAATCAAGCTTTCCCGAAGAATAATAATCGAACATACAAGCACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACGAACCCAACAAAAAGGAGAGTGTGAAACCTAACTAAAAAGGTCTCTAATCCAACAGAACAAACCTAACTAAAAAGGACTTCAATCCAACAGAATAACACCTAGCTCATAATTACCAAAAGAAAGTGTGACGGGCACCCATGAGGTTGCATTAAACCTAACAAAAGGTTTTTGAGGGCCTGATAATTGACGAGCGCCCCCTCAGGTCAATGTAGGGCTTGATAATTGAGACACCAAACAAAGCTATTTAGTGGATACTGGGTAGCTCAAATGGTTTTTGAGAGTATATTCTGTAACTCATCCCTTGGGTCAGTGTAGGATATACTACAAGGTTCTATAACCACCTGATTTCTAGAGCACCCAGTACCCACCATCGTACTTAGGAGCTTGACAAACCATCTGGAAAATAAATCATCCTAAGAATAGTTTTTTGTCTCGTTTTTTGCTTGGATAAAATGCTATCAAAATCTGGGGAATGAGGACCATCTTTTCTTGACCAGCTAATTTGCTTCTTAATAACATTATTATTATTTGTAGAAAGATTTGCTTCTAAATGTTGTGCTAAGCGTTCTAGTGAGTTTGGTTTGAGCCATTGTATACCTCATTGTATGGCGTCCAATGTTGATCAGCTCCTTCTGCTTCATATTATCAACGTAAGCTCCTCTTGTTTCCTATTGAGGAAAAAATAACAGATTATGTATTCTTTTCTGTGATCCCAAAGTCAAATGTCCGGTTATGGGCTACTTGAATAACATACACGTTAATCTGCAAAGGTAAATTTATACTGACAACAGCTTGGCCCTTTTTCTGTTCAATGTGCAAAACTCGTAGGATCTTCATTTAGCATAGTGGAACCCCCCACGGCAACCTATGATTTCTTGTGGTTCTTCAAAGTTTTATCATAATTATAAGCTTATTGAGATCATGTACAGATTATATATGCCAGTTCGTTTACTTATTCCAGATTAATCTTTTGATCCTTACTTTTCGGTATCTGGTGTAATTGTTCTGTGCAGATTGCTCAAGACATTGGGACAGAAGCAAAGTCTCAGCAAGATTTTCTAGATCAGTTGGTATGTTAATTGTTTTCTTAATACTGTTCATAGTTGTCATATTTCCACTTGTGTTTGTATTTTGATTTTAATTCTTGGTTTGTACTTATTGATGTTCGTACTTGTGAGGAGGAAAAAAAAAATTTGGTTGTGATTACTTGAGAAAATGGAAACGACAGATAATTGGAGTAAAAGAAGTCAACAGGGAAAGCAATAGAATGAGAATTAAAAATTGAATGTCGCACTTTTTTAAATTATTTTGGAGCAAGGATCAGAATGCAAATGATTGTCACGGACTCACGTATTTATTGCTTTTGCTATTTCTTTTTTCCTTTTTCTTTTTTGTAATCCTTTTTACTTTTTCGTTTTTTTTTCCTGTTGTGGAGTTTGTATCTTTAAAGCATTAGTCTCTTTTTATTTGCTCGATAACTTCAGAGTCTAAATTACATAGAGCTCTATCAGATTAAAAGAAACTAACTGAAGAAAATCAGTCTCATATTGATTTGTATCGGTTCAAAACATGTGGAATTGCCGATACCTCTTTCACTTCTGTCAGATTCAAACTTCTGTTTTCTGTCTTGTTGCAGCAAATGACATTGATTAA

mRNA sequence

ATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCTTTCTACAATGGCAACGCCGCCCCATATCGCTCCAGGGAGGGGCTTAGCACAAGACCGGCGGCCGCATCCGATGAAATTCAACTTCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTTGGTCTCCACAGCCAAGTTAAAAGGCTTAGAAATATTGCTCAAGACATTGGGACAGAAGCAAAGTCTCAGCAAGATTTTCTAGATCAGTTGATTCAAACTTCTGTTTTCTGTCTTGTTGCAGCAAATGACATTGATTAA

Coding sequence (CDS)

ATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCTTTCTACAATGGCAACGCCGCCCCATATCGCTCCAGGGAGGGGCTTAGCACAAGACCGGCGGCCGCATCCGATGAAATTCAACTTCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTTGGTCTCCACAGCCAAGTTAAAAGGCTTAGAAATATTGCTCAAGACATTGGGACAGAAGCAAAGTCTCAGCAAGATTTTCTAGATCAGTTGATTCAAACTTCTGTTTTCTGTCTTGTTGCAGCAAATGACATTGATTAA

Protein sequence

MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSVFCLVAANDID

Homology

[Close]

BLAST of HG10013455 vs. NCBI nr
Match: KGN60384.2 (hypothetical protein Csa_001559 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 1.6e-40
Identity = 93/99 (93.94%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
          MASSSFRGGSSFYNG+AA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61 RLRNIAQDIGTEAKSQQDFLDQLIQTSV-FCLVAANDID 99
          RLRNIAQDIGTEAKSQQDFLDQLIQTSV FCLV ANDID
Sbjct: 61 RLRNIAQDIGTEAKSQQDFLDQLIQTSVLFCLVPANDID 99

[Close]

BLAST of HG10013455 vs. NCBI nr
Match: XP_008466185.1 (PREDICTED: bet1-like protein At1g29060 [Cucumis melo] >KAA0038681.1 bet1-like protein [Cucumis melo var. makuwa] >TYK31291.1 bet1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 159.5 bits (402), Expect = 1.5e-35
Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = 0


Query: 1  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
          MASSSFRGGSSFYNG+AAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61 RLRNIAQDIGTEAKSQQDFLDQLIQTSV 89
          RLRNIAQDIGTEAKSQQDFLDQL  T +
Sbjct: 61 RLRNIAQDIGTEAKSQQDFLDQLQMTLI 88

[Close]

BLAST of HG10013455 vs. NCBI nr
Match: XP_038896659.1 (bet1-like protein At1g29060 [Benincasa hispida])

HSP 1 Score: 157.5 bits (397), Expect = 5.8e-35
Identity = 82/88 (93.18%), Postives = 83/88 (94.32%), Query Frame = 0


Query: 1  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
          MASSSFRGGSSFYN NAA YRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1  MASSSFRGGSSFYNSNAAAYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61 RLRNIAQDIGTEAKSQQDFLDQLIQTSV 89
          RLRNIAQDIGTEAKSQQDFLDQL  T +
Sbjct: 61 RLRNIAQDIGTEAKSQQDFLDQLQMTLI 88

[Close]

BLAST of HG10013455 vs. NCBI nr
Match: XP_004136265.1 (bet1-like protein At1g29060 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 3.7e-34
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
          MASSSFRGGSSFYNG+AA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61 RLRNIAQDIGTEAKSQQDFLDQLIQTSV 89
          RLRNIAQDIGTEAKSQQDFLDQL  T +
Sbjct: 61 RLRNIAQDIGTEAKSQQDFLDQLQMTLI 88

[Close]

BLAST of HG10013455 vs. NCBI nr
Match: XP_022940948.1 (bet1-like protein At1g29060 [Cucurbita moschata] >KAG7037611.1 Bet1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.5 bits (389), Expect = 4.9e-34
Identity = 78/88 (88.64%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
          MAS+S+RGGSSFYNG+AAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDD+IVGLH QVK
Sbjct: 1  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVK 60

Query: 61 RLRNIAQDIGTEAKSQQDFLDQLIQTSV 89
          RLRNIAQ+IGTEAKSQQDFLDQL  T +
Sbjct: 61 RLRNIAQEIGTEAKSQQDFLDQLQMTLI 88

[Close]

BLAST of HG10013455 vs. ExPASy Swiss-Prot
Match: Q8L9S0 (Bet1-like protein At1g29060 OS=Arabidopsis thaliana OX=3702 GN=At1g29060 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-23
Identity = 58/88 (65.91%), Postives = 72/88 (81.82%), Query Frame = 0


Query: 1  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
          MAS+   GGS +  G A PYRSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV+
Sbjct: 1  MASNRGAGGSLY--GGADPYRSREGLSTRNASGSEEIQLRIDPMHSDLDDEILGLHGQVR 60

Query: 61 RLRNIAQDIGTEAKSQQDFLDQLIQTSV 89
          +L+NIAQ+IG+EAKSQ+DFLD+L  T +
Sbjct: 61 QLKNIAQEIGSEAKSQRDFLDELQMTLI 86

[Close]

BLAST of HG10013455 vs. ExPASy Swiss-Prot
Match: Q8VXX9 (Bet1-like protein At4g14600 OS=Arabidopsis thaliana OX=3702 GN=At4g14600 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-23
Identity = 60/90 (66.67%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 1  MASSSFRGGS--SFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQ 60
          MAS+  R G+  S Y G AAPYRSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH Q
Sbjct: 1  MASNPHRSGAGGSLY-GGAAPYRSREGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQ 60

Query: 61 VKRLRNIAQDIGTEAKSQQDFLDQLIQTSV 89
          V++L+NIAQ+IG+EAK Q+DFLD+L  T +
Sbjct: 61 VRQLKNIAQEIGSEAKFQRDFLDELQMTLI 89

[Close]

BLAST of HG10013455 vs. ExPASy TrEMBL
Match: A0A5A7TAQ3 (Bet1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005890 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.3e-36
Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = 0


Query: 1  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
          MASSSFRGGSSFYNG+AAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61 RLRNIAQDIGTEAKSQQDFLDQLIQTSV 89
          RLRNIAQDIGTEAKSQQDFLDQL  T +
Sbjct: 61 RLRNIAQDIGTEAKSQQDFLDQLQMTLI 88

[Close]

BLAST of HG10013455 vs. ExPASy TrEMBL
Match: A0A1S3CQM7 (bet1-like protein At1g29060 OS=Cucumis melo OX=3656 GN=LOC103503676 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.3e-36
Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = 0


Query: 1  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
          MASSSFRGGSSFYNG+AAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61 RLRNIAQDIGTEAKSQQDFLDQLIQTSV 89
          RLRNIAQDIGTEAKSQQDFLDQL  T +
Sbjct: 61 RLRNIAQDIGTEAKSQQDFLDQLQMTLI 88

[Close]

BLAST of HG10013455 vs. ExPASy TrEMBL
Match: A0A0A0LHL4 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889980 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.8e-34
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
          MASSSFRGGSSFYNG+AA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61 RLRNIAQDIGTEAKSQQDFLDQLIQTSV 89
          RLRNIAQDIGTEAKSQQDFLDQL  T +
Sbjct: 61 RLRNIAQDIGTEAKSQQDFLDQLQMTLI 88

[Close]

BLAST of HG10013455 vs. ExPASy TrEMBL
Match: A0A6J1IFD8 (bet1-like protein At1g29060 OS=Cucurbita maxima OX=3661 GN=LOC111476742 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.4e-34
Identity = 81/96 (84.38%), Postives = 82/96 (85.42%), Query Frame = 0


Query: 1  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
          MASSSFRGGSSFYNGNAAPYRSREGLSTR AAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1  MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61 RLRNIAQDIGTEAKSQQDFLDQLIQTSVFCLVAAND 97
          RLRNIA DIGTEAK Q DFLDQL  T +       D
Sbjct: 61 RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKD 96

[Close]

BLAST of HG10013455 vs. ExPASy TrEMBL
Match: A0A6J1F6I9 (bet1-like protein At4g14600 OS=Cucurbita moschata OX=3662 GN=LOC111442618 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.4e-34
Identity = 81/96 (84.38%), Postives = 82/96 (85.42%), Query Frame = 0


Query: 1  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
          MASSSFRGGSSFYNGNAAPYRSREGLSTR AAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1  MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61 RLRNIAQDIGTEAKSQQDFLDQLIQTSVFCLVAAND 97
          RLRNIA DIGTEAK Q DFLDQL  T +       D
Sbjct: 61 RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKD 96

[Close]

BLAST of HG10013455 vs. TAIR 10
Match: AT1G29060.1 (Target SNARE coiled-coil domain protein )

HSP 1 Score: 110.2 bits (274), Expect = 9.8e-25
Identity = 58/88 (65.91%), Postives = 72/88 (81.82%), Query Frame = 0


Query: 1  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
          MAS+   GGS +  G A PYRSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV+
Sbjct: 1  MASNRGAGGSLY--GGADPYRSREGLSTRNASGSEEIQLRIDPMHSDLDDEILGLHGQVR 60

Query: 61 RLRNIAQDIGTEAKSQQDFLDQLIQTSV 89
          +L+NIAQ+IG+EAKSQ+DFLD+L  T +
Sbjct: 61 QLKNIAQEIGSEAKSQRDFLDELQMTLI 86

[Close]

BLAST of HG10013455 vs. TAIR 10
Match: AT4G14600.1 (Target SNARE coiled-coil domain protein )

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-24
Identity = 60/90 (66.67%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 1  MASSSFRGGS--SFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQ 60
          MAS+  R G+  S Y G AAPYRSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH Q
Sbjct: 1  MASNPHRSGAGGSLY-GGAAPYRSREGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQ 60

Query: 61 VKRLRNIAQDIGTEAKSQQDFLDQLIQTSV 89
          V++L+NIAQ+IG+EAK Q+DFLD+L  T +
Sbjct: 61 VRQLKNIAQEIGSEAKFQRDFLDELQMTLI 89

The following BLAST results are available for this feature:

BLAST of HG10013455 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60384.2	1.6e-40	93.94	hypothetical protein Csa_001559 [Cucumis sativus]	[more]
XP_008466185.1	1.5e-35	93.18	PREDICTED: bet1-like protein At1g29060 [Cucumis melo] >KAA0038681.1 bet1-like pr...	[more]
XP_038896659.1	5.8e-35	93.18	bet1-like protein At1g29060 [Benincasa hispida]	[more]
XP_004136265.1	3.7e-34	90.91	bet1-like protein At1g29060 [Cucumis sativus]	[more]
XP_022940948.1	4.9e-34	88.64	bet1-like protein At1g29060 [Cucurbita moschata] >KAG7037611.1 Bet1-like protein...	[more]

BLAST of HG10013455 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9S0	1.4e-23	65.91	Bet1-like protein At1g29060 OS=Arabidopsis thaliana OX=3702 GN=At1g29060 PE=2 SV...	[more]
Q8VXX9	1.8e-23	66.67	Bet1-like protein At4g14600 OS=Arabidopsis thaliana OX=3702 GN=At4g14600 PE=2 SV...	[more]

BLAST of HG10013455 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TAQ3	7.3e-36	93.18	Bet1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00...	[more]
A0A1S3CQM7	7.3e-36	93.18	bet1-like protein At1g29060 OS=Cucumis melo OX=3656 GN=LOC103503676 PE=4 SV=1	[more]
A0A0A0LHL4	1.8e-34	90.91	t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=365...	[more]
A0A6J1IFD8	2.4e-34	84.38	bet1-like protein At1g29060 OS=Cucurbita maxima OX=3661 GN=LOC111476742 PE=4 SV=...	[more]
A0A6J1F6I9	2.4e-34	84.38	bet1-like protein At4g14600 OS=Cucurbita moschata OX=3662 GN=LOC111442618 PE=4 S...	[more]

BLAST of HG10013455 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29060.1	9.8e-25	65.91	Target SNARE coiled-coil domain protein	[more]
AT4G14600.1	1.3e-24	66.67	Target SNARE coiled-coil domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.5.110		coord: 44..86 e-value: 9.1E-7 score: 30.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	PANTHER	PTHR12791:SF55	BNAC03G58880D PROTEIN	coord: 9..86
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 36..83
IPR039897	BET1-like protein	PANTHER	PTHR12791	GOLGI SNARE BET1-RELATED	coord: 9..86
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 42..83 score: 9.707277

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013455.1	HG10013455.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0030173	integral component of Golgi membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding