HG10013427 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10013427
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRhamnogalacturonan endolyase
LocationChr02: 1371267 .. 1377905 (+)
RNA-Seq ExpressionHG10013427
SyntenyHG10013427
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCCGCCGCCGGACACGACCCCGACCCCGCGGCACCTCCTCCGTTGCAACTAAGGATTTACGACCAACATGTAATGTTCTCAACTCTCTTATATGTTTTTCTAATGTTTTTAAATGGTTGAAATTCGTGTAATTTACCTCTCAAATCACAATTATCCAAATTTAATAGTACTTGTACTTTTAGGTAAAGCTTAAAATTGGTCCATATTTTTAGTTTATTGTTAATTTTTTAATTTTTTGTTTATATTAAGTAACTTCCTTATATGAATTTTGGAAAATATATGGTCATGTTGCGTGTTCTTTTTTTCTTTAAAAAATGATAATTATTATCTAATAAATTTCGATAAAAATAAATTTCAAATTAATAGTAATTTTAAGCTTTTTTTTATTGAAAATATAGTGATTAAAATTATTAAACATTTGTAATGAAAACAAAAAGTATATGACTAAAATAGTATTTCAGTTTGTTTTAATTAAGACTAATATTTTTAAAAAAATATTTGTGAATGTTGTCATTTATTTAAAAAATACTACTATACTTATCAAAGTTGCAATATTACTCTTGACCTTTTATCAACGTTTCAAATCTACAATTGAAGTAGAAATTCTCTAGAATTATTTTTAAAATTAGAACTTGGAACAATGTAGTTGTGAATTAGAAGGGTGTGACAATCCAAATTTCGGTTCCTAAACTATTGTCACACCATTTTATGTCCTTAATAATTTTTGTGCAAAATTCAAAAAATTTCTACTGGCAATTTAAAAATCTTTACAATGGATCAAATGTGATATTGTAACTTGGTTTTGAGGTAATTTATTATTTAACCCTTAATTAATCAAGTTGACAAAAAATAGTCTCATTGTTTTTGTTGGCACAGCTATTGCAATGCGATAATTATGTGTATGTAATTACTTGACTTGATACAAATTATTTAAGGTGAACATTATCGGACTATTGTGTTGGTCTAGGTTGTGATGGACAACGGCATAATCGGAGTTAACTTGTCGAATCCAAATGGTATGGTAATTGGAATACAATACAAAGAGATTGAAAACTTGCTTGAGGTTGATAATGCCGAAGATGATAGAGGGTAATTGATTTTAATTTTTTAATGCTCTATTTGATAATGATTTTATTTTTAGTTTTCTTTATTTATTAACTATTTTTTGGTTTTAATTAAAAAAACTGTTTGAATGTTTAATCAAATTTTAAAAACAAAAATAATTTTAAAAAAATAAAAAGTAATTTTTTGTTTTTCAAACTCAACCAAGAATTCCAACGCTTCCTTAATAAACATGAAAATTATTGAAAAGAAATGGTGAGAAAATAAACCCAATTAAAAAAAAAACTAAATAGTTAACAAATAAGACCTAAATTATTAATAATTCTTTACTACCATTTTTTTCTTGCATATAAAAAATAGTTATTTGTTTTAAAAATTATTATTATTATTTTTGCGTTAAAAATAAGAAAATCAAAGCATTGAGCTATGCCCGATTTGAAGAGTAGAGAAGATTTCTTATTTTAAAGAAAAGAGCTTAACTAATTTTATAAAAGCAAAATGTTTATCAGAACATTACTTAAATATCAAAGCTAATGCCTTGTAATTTTATGGGCTGAATTGAATATTCAGATATTGGGACATCGTTTGGAATGTGGCAGGAAGTTCAGGAACCAAGGGCATTTTTGATCGGTAAGACTCCCAAAAAAACCAGCACTTCTAGTTAATGTATCAAATTTCTCCTGAATTTTGGTGAAGATGATAGAAGTAATAAACATAATCTGATAGTATTTCGAAAAATCTGAAGCAACTGCATTTTATGTACAGAATTGAAGCAACAGATTTCAAGGTAATTGTAGAAAATGATGAACAAATAGAACTCTCATTCAGCAGAACCTACAATTCATCTATCGGAGGTGACCTCATTCCCTTAAACATCGACAAAAGGTAACCAAACAGAAACGATTCTAAAAAAATTCTCGGAATTTAAATCATCATGACAACGAACGATTAAGGGCGAAAAATCGAAATCGAAATCTTCTTCTACAGGTTTGTGATGCTTCGTAATTCATCAGGATTCTATTCGTACGCTATTTACGAACACTTGAAAGAATGGCCTGCGTTTATCATCGACAACACCAGAATCGTATTCAAGCTCCGAAAAGACAAGTAAAGAAATCGCAGTTTCAATTTTCGTTTTGACTTGGGACAAATTGTGATTGAATGAACCATGGAAATGGTAAATTTTGAATGATTAGGTTTCGTTACATGGCTGTAGCAGATAAGAGACAGAGATTCATGCCTTTACCCGACGATCGGAAGCCACCGCGAGGGGAAGCCCTAGCTTATCCGGAGGCCGTTCTTCTTGTCGATCCTGTAGAACCAGAGCTCAAGGGGGAGGTGCCTCTCTTTCTCTATTATATTTCTCGGCAAAATTATAACAAATATTTCTCGGCAAAATTATAACAAATACTTTAATATATATATTATATATATATTAAAAGTTATTAACTTTAGAATTAATCTACAGAAGAAATTAATTTTAGAATTAATCTACCGAAGAAAATCGTTCTAAGTCCTACAACGTTCGTATCTCAGAAAGAATTTAAAAGGGGCTATTGTTATTATTATTTTTATTTAGACTATATATATATATATATTTATTATTACTATACCAACTTATAATGATTAAGATTAAACTACAATTTTAATTAGGTAATTATAATGAGTAGCAATTTTATGGATAGTAATCTAAGTGTATAGCAATATTTTAAAATATTGCAAATATAACAAAGTCTATCACAGACTATAAAAGTGATAGACTACCTAGATTATAAAAATCTATATGCAATAAAAGTTTATCATGGATAGACTTGGTTATATTTACAATTTTTTTAAAAATTTTTGCTATATATTAATACTTTGAATTTAATTACTATATTTACAATTGTCTTATTTTAATTTCTATACATTGAAATTTGTGTTTATTTGTTCCTTAATTTTTAAAATTTCAAATATAATTCTTGAGCTATCATTTTTTTTAATTAGTAGATTTGTTAATATACAATGTTAAAAATTTAGAGGTATAAAATCGAAAATTTAGAAAACTACTCCATTACAAATTTAATAGATACTTTTAAAAGCTTAGAGACCAAATGGATAAAAACTTAATCTACATAATTTAAACTTATTTTTATAATTTGTTAGGAGGATTAAAATGGTAATTTGACATGTGAATAAACGTAACACATTTTTTTTAAATAATAACTTTTTCGGGAAAGGAATTTGAGTGTCAACTGTCAATGTGTCATTTAATAAGTCGGATGCAGGTGGATGACAAGTACCAATACGGCTGCGAAAGCAAAGATGCTCGGGTTCACGGGTGGATATCCACCGACCCGCCCATTGGCCTTTGGCAAATCGCAGCCACCGAGGAGTTTCGCTCCGGTGGACCCCTCAAACAGTTTCTCACCTCCCATGTGGGTCCCACAACCCTTACTGTGAGTGCTCTCTGCTCCAGCTTCAAGCGAAATACATCGCTTTCTTCCTCTTCCTTCTCTCATGGAATCTATTTCCAATTGGCAATTAGTTTTCTTGAAAATTGGCGATTATTGAAGCTTTCATTTGAGTTACAAAGTAATGTCAGTCCAGAAGATTGCTTATGAACCTGATCAATGCCTTCCTATTAGGCTTGAAATGTACATGATGTTTATTGATGATTGATTATGTTTTTGACAAAGTCCATTATGGCTTTTGAACTAATCGTTTTAACATCTGGAACGTAATGGTAATGGTAATTGTATTTGTTAGGTTTTTCATAGCGCTCATTACGCAGGAGAGGATATGGTTATAAAGTTCGGAAGTAATGAGCCATGGAAGAAGGTTTTCGGTCCTATCTTTATCCATCTTAATTCCTTGCCTGAAGGAGAGGATCCCCTTACACTCTGGGATAATGCTAAAAAACAGGTATATAATTTTTACAAGGATGGAAATTATTTTGATGAATCGATGAGCAATGATCCAAATAGAGTTGTCGTTTTCAGATGATGGTCGAAGTTCAAAGCTGGCCTTACGGTTTCCCTGCTTCTGAGGATTTTCTCAAATCCGATCAACGAGGCACCGTCAGCGGCAGATTGATAATGCGGGAGAGGTAGCTTATTATCTGCGTGTTGCAGTTCTTAGAGCAAGAAAGAAAACAAAAATTAGCATGATTTTGTTCTTCTTTTCTAAATTTTACAATTTATAATTCTTCGTCCTGCTTAGATTTGTGAGTGATGAATCTGTGCCTGCAAGTGGTGCATATGTGGGGTTGGCACTTCCTGGAGAACTTGGCTCTTGGCAAACCGAAAGCAAGGTGCAGCGACATCTGAGAATCTTATATACTCATCCAAATTGCTTGCGCATATTCTTTTTAATAATAATTATGATTAGATATTGTTTATAATTCTTGTTGTTCAAGATCAATTGGATGTATTGGTAATTTAAAATAGTCGAATTTAGTTAAAGATAAAATTAATTAATAATTATTACGAATAGTTTGAGGATAGTTAAACTAGCTAGTCAAAGTCAAGTATTTGTGTTTAGTTAGCCAAATCATTGACTGACTTGGATAATAGTTGAAATTTCCAATCTACAAAATTTACTGCTTTTGAGATTTTTATACTTTGAAGGTTGCTTTCCAGAAAATTCACTTCTTAAATTGCTGGTTAGATGCAAATGCCCCCTAAAACTACACCCTGCCCGTAACTTGTTCATCTTCAGTCAGTGGCATGAGCAGAAATCTTTCTTTCATTTCATCAATTGTTGATGACCTATGGCTGACTTCAACACGTTTGGCAACTCAGGGCTACCAATTCTGGACGAGAGCAGATCAGAATGGATGTTTCTCTTTGGATAATGTTCGCAGTGGAAACTATAGTCTTTATGGATGGGTCCCTAATTTTATCGGCAATTACCAATACAATCGTTTCATTGCTGTAACCCCAGGTTTTTACCTCACTTCCATCATATTTTCATGCTTCATTGAGTGTATGATTAGTATTTTAATCTCATTGAGTATGTAGGCAGTGACATCAATGTCGGTGAACTTGTTTTTGAGCCCCCAAGAGATGGTCCTACATTGTGGGAAATAGGCATTCCTGACCGTACTGCTGCAGAATTCTATGTACCGGATCCTAATCCGAAGTATATTAATAAACTTTATGTCAATCATTCAGATAAGTAAGTTTTCCTTGGAGTTTTCACTTTTCTTTCTATATGTACTTTTCCCTTTCAAGCATAGGTACAGTAGCATGTTGGAGTGGTGTAAAGTAGCATGTTGGAGTGATGTGTAGTCTAATGATAGTTATATTATCTTCTTTATATATTTATACACGTTTGGGGTGTCGATGCTATAGTTTTATGATAATTTACTTATATTTTTATGATAATTTACTCAATCGATTATTATGCCAGGTTTAGGCAGTATGGATTATGGGAAAGATACGCAGAGTTATATCCTGACGAGGATCTAGTTTATACAGTTGGGCTTAGTGAGTACAGAAAAGATTGGTTCTTTGCACAAGTTACCAGGTTTCCTTCCTTAAGACTGTTCTTGCAGTTTTCATTCATTTTTTTCAATGATTTTTTGTTGCTAAATAATATTTTAAAATTGGCCAGTCATAAAAGTGACATATGCATTCTCTCATTTTACATTTGGCAGTAACGTTCACAAATGCAGAAATCAATGCACAATACTTCAAACACTTGACATTAGCTCATTTTGTTTAATGGAACATGCTCACATTTCTTGATACGATATATACAATGATTGTATCTTATACGTCTCAATTATCTATCATTGAGTTTGTTTTTACCTTTTATGCATTCTTTGATGGCTTGTGCGGTGTATTCTGCAATTGTAGGGGCTGTAAATAGATGCATTGAATTTTACCTATCAATGATCTACTGGCTAACCTTGAATCAAGCTTACTGAAGCTGGGTTTTCCTTTGGCTGACAATTTGACATTGCATATGTTTAATTCTTGTTAGCCTTTCCATAACATTGTTGTTAACATGGAATTGAATTGGTAGACACTTTGGCTATAATCCTTTTTTGCACTGTAGGAAGATAGGGGACAACAAATATGCTGGAACTACCTGGAAAATTAAGTTCCAACTTGACAGTCCAGATACACATGGAACATATAGGCTGCGTCTTGCATTGGCCACTGCACATGCTGCAGAATTACAAGTATGAAACTCTATCTTTATCTTATATTTGACTGCTCATGACCTGTCACTTTGGGGTTTTGGGGTGTGGGGGCGGTGTAGGATCACATTCATTTTTTTCCAGCATGCATGTCTCCATTTTTACTTGAAACTAAAACATATTGTTACTTTAAGGTTCGACTGAATGATGCACAAGCACTTCCTCCATTATTCACAACTGGATTGATTGGAAAGGACAATACTATAGCTAGACATGGAATCCATGGTCTCTATCGTATGTACACGGTTGACATTCCGGGCGGTGAGCTTGTGGTGGGCAACAATACAATTCTTCTTACGCAAGCAAGTAGCAACAGTCCTTTTGTGGGGATCATGTATGATTATATTCGTCTAGAAGGACCCTTATCATCCAAAATGATGTAA

mRNA sequence

ATGGCCGCCGCCGCCGGACACGACCCCGACCCCGCGGCACCTCCTCCGTTGCAACTAAGGATTTACGACCAACATGTTGTGATGGACAACGGCATAATCGGAGTTAACTTGTCGAATCCAAATGGTATGGTAATTGGAATACAATACAAAGAGATTGAAAACTTGCTTGAGGTTGATAATGCCGAAGATGATAGAGGATATTGGGACATCGTTTGGAATGTGGCAGGAAGTTCAGGAACCAAGGGCATTTTTGATCGAATTGAAGCAACAGATTTCAAGGTAATTGTAGAAAATGATGAACAAATAGAACTCTCATTCAGCAGAACCTACAATTCATCTATCGGAGGTGACCTCATTCCCTTAAACATCGACAAAAGGTTTGTGATGCTTCGTAATTCATCAGGATTCTATTCGTACGCTATTTACGAACACTTGAAAGAATGGCCTGCGTTTATCATCGACAACACCAGAATCGTATTCAAGCTCCGAAAAGACAAGTTTCGTTACATGGCTGTAGCAGATAAGAGACAGAGATTCATGCCTTTACCCGACGATCGGAAGCCACCGCGAGGGGAAGCCCTAGCTTATCCGGAGGCCGTTCTTCTTGTCGATCCTGTAGAACCAGAGCTCAAGGGGGAGGTGGATGACAAGTACCAATACGGCTGCGAAAGCAAAGATGCTCGGGTTCACGGGTGGATATCCACCGACCCGCCCATTGGCCTTTGGCAAATCGCAGCCACCGAGGAGTTTCGCTCCGGTGGACCCCTCAAACAGTTTCTCACCTCCCATGTGGGTCCCACAACCCTTACTGTTTTTCATAGCGCTCATTACGCAGGAGAGGATATGGTTATAAAGTTCGGAAGTAATGAGCCATGGAAGAAGGTTTTCGGTCCTATCTTTATCCATCTTAATTCCTTGCCTGAAGGAGAGGATCCCCTTACACTCTGGGATAATGCTAAAAAACAGATGATGGTCGAAGTTCAAAGCTGGCCTTACGGTTTCCCTGCTTCTGAGGATTTTCTCAAATCCGATCAACGAGGCACCGTCAGCGGCAGATTGATAATGCGGGAGAGATTTGTGAGTGATGAATCTGTGCCTGCAAGTGGTGCATATGTGGGGTTGGCACTTCCTGGAGAACTTGGCTCTTGGCAAACCGAAAGCAAGGGCTACCAATTCTGGACGAGAGCAGATCAGAATGGATGTTTCTCTTTGGATAATGTTCGCAGTGGAAACTATAGTCTTTATGGATGGGTCCCTAATTTTATCGGCAATTACCAATACAATCGTTTCATTGCTGTAACCCCAGGCAGTGACATCAATGTCGGTGAACTTGTTTTTGAGCCCCCAAGAGATGGTCCTACATTGTGGGAAATAGGCATTCCTGACCGTACTGCTGCAGAATTCTATGTACCGGATCCTAATCCGAAGTATATTAATAAACTTTATGTCAATCATTCAGATAAGTTTAGGCAGTATGGATTATGGGAAAGATACGCAGAGTTATATCCTGACGAGGATCTAGTTTATACAGTTGGGCTTAGTGAGTACAGAAAAGATTGGTTCTTTGCACAAGTTACCAGGAAGATAGGGGACAACAAATATGCTGGAACTACCTGGAAAATTAAGTTCCAACTTGACAGTCCAGATACACATGGAACATATAGGCTGCGTCTTGCATTGGCCACTGCACATGCTGCAGAATTACAAGTTCGACTGAATGATGCACAAGCACTTCCTCCATTATTCACAACTGGATTGATTGGAAAGGACAATACTATAGCTAGACATGGAATCCATGGTCTCTATCGTATGTACACGGTTGACATTCCGGGCGGTGAGCTTGTGGTGGGCAACAATACAATTCTTCTTACGCAAGCAAGTAGCAACAGTCCTTTTGTGGGGATCATGTATGATTATATTCGTCTAGAAGGACCCTTATCATCCAAAATGATGTAA

Coding sequence (CDS)

ATGGCCGCCGCCGCCGGACACGACCCCGACCCCGCGGCACCTCCTCCGTTGCAACTAAGGATTTACGACCAACATGTTGTGATGGACAACGGCATAATCGGAGTTAACTTGTCGAATCCAAATGGTATGGTAATTGGAATACAATACAAAGAGATTGAAAACTTGCTTGAGGTTGATAATGCCGAAGATGATAGAGGATATTGGGACATCGTTTGGAATGTGGCAGGAAGTTCAGGAACCAAGGGCATTTTTGATCGAATTGAAGCAACAGATTTCAAGGTAATTGTAGAAAATGATGAACAAATAGAACTCTCATTCAGCAGAACCTACAATTCATCTATCGGAGGTGACCTCATTCCCTTAAACATCGACAAAAGGTTTGTGATGCTTCGTAATTCATCAGGATTCTATTCGTACGCTATTTACGAACACTTGAAAGAATGGCCTGCGTTTATCATCGACAACACCAGAATCGTATTCAAGCTCCGAAAAGACAAGTTTCGTTACATGGCTGTAGCAGATAAGAGACAGAGATTCATGCCTTTACCCGACGATCGGAAGCCACCGCGAGGGGAAGCCCTAGCTTATCCGGAGGCCGTTCTTCTTGTCGATCCTGTAGAACCAGAGCTCAAGGGGGAGGTGGATGACAAGTACCAATACGGCTGCGAAAGCAAAGATGCTCGGGTTCACGGGTGGATATCCACCGACCCGCCCATTGGCCTTTGGCAAATCGCAGCCACCGAGGAGTTTCGCTCCGGTGGACCCCTCAAACAGTTTCTCACCTCCCATGTGGGTCCCACAACCCTTACTGTTTTTCATAGCGCTCATTACGCAGGAGAGGATATGGTTATAAAGTTCGGAAGTAATGAGCCATGGAAGAAGGTTTTCGGTCCTATCTTTATCCATCTTAATTCCTTGCCTGAAGGAGAGGATCCCCTTACACTCTGGGATAATGCTAAAAAACAGATGATGGTCGAAGTTCAAAGCTGGCCTTACGGTTTCCCTGCTTCTGAGGATTTTCTCAAATCCGATCAACGAGGCACCGTCAGCGGCAGATTGATAATGCGGGAGAGATTTGTGAGTGATGAATCTGTGCCTGCAAGTGGTGCATATGTGGGGTTGGCACTTCCTGGAGAACTTGGCTCTTGGCAAACCGAAAGCAAGGGCTACCAATTCTGGACGAGAGCAGATCAGAATGGATGTTTCTCTTTGGATAATGTTCGCAGTGGAAACTATAGTCTTTATGGATGGGTCCCTAATTTTATCGGCAATTACCAATACAATCGTTTCATTGCTGTAACCCCAGGCAGTGACATCAATGTCGGTGAACTTGTTTTTGAGCCCCCAAGAGATGGTCCTACATTGTGGGAAATAGGCATTCCTGACCGTACTGCTGCAGAATTCTATGTACCGGATCCTAATCCGAAGTATATTAATAAACTTTATGTCAATCATTCAGATAAGTTTAGGCAGTATGGATTATGGGAAAGATACGCAGAGTTATATCCTGACGAGGATCTAGTTTATACAGTTGGGCTTAGTGAGTACAGAAAAGATTGGTTCTTTGCACAAGTTACCAGGAAGATAGGGGACAACAAATATGCTGGAACTACCTGGAAAATTAAGTTCCAACTTGACAGTCCAGATACACATGGAACATATAGGCTGCGTCTTGCATTGGCCACTGCACATGCTGCAGAATTACAAGTTCGACTGAATGATGCACAAGCACTTCCTCCATTATTCACAACTGGATTGATTGGAAAGGACAATACTATAGCTAGACATGGAATCCATGGTCTCTATCGTATGTACACGGTTGACATTCCGGGCGGTGAGCTTGTGGTGGGCAACAATACAATTCTTCTTACGCAAGCAAGTAGCAACAGTCCTTTTGTGGGGATCATGTATGATTATATTCGTCTAGAAGGACCCTTATCATCCAAAATGATGTAA

Protein sequence

MAAAAGHDPDPAAPPPLQLRIYDQHVVMDNGIIGVNLSNPNGMVIGIQYKEIENLLEVDNAEDDRGYWDIVWNVAGSSGTKGIFDRIEATDFKVIVENDEQIELSFSRTYNSSIGGDLIPLNIDKRFVMLRNSSGFYSYAIYEHLKEWPAFIIDNTRIVFKLRKDKFRYMAVADKRQRFMPLPDDRKPPRGEALAYPEAVLLVDPVEPELKGEVDDKYQYGCESKDARVHGWISTDPPIGLWQIAATEEFRSGGPLKQFLTSHVGPTTLTVFHSAHYAGEDMVIKFGSNEPWKKVFGPIFIHLNSLPEGEDPLTLWDNAKKQMMVEVQSWPYGFPASEDFLKSDQRGTVSGRLIMRERFVSDESVPASGAYVGLALPGELGSWQTESKGYQFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQYNRFIAVTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDKFRQYGLWERYAELYPDEDLVYTVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHGTYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPGGELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPLSSKMM
Homology
[Close]
BLAST of HG10013427 vs. NCBI nr
Match: XP_038899395.1 (probable rhamnogalacturonate lyase B isoform X3 [Benincasa hispida])

HSP 1 Score: 1237.2 bits (3200), Expect = 0.0e+00
Identity = 585/623 (93.90%), Postives = 600/623 (96.31%), Query Frame = 0 

Query: 28  MDNGIIGVNLSNPNGMVIGIQYKEIENLLEVDNAEDDRGYWDIVWNVAGSSGTKGIFDRI 87
           MDNGIIGVNLSNP GMVIGIQYK +ENLLEV NAEDDRGYWDIVWN+AGSSGTKGIFDR+
Sbjct: 1   MDNGIIGVNLSNPKGMVIGIQYKGVENLLEVGNAEDDRGYWDIVWNLAGSSGTKGIFDRL 60

Query: 88  EATDFKVIVENDEQIELSFSRTYNSSIGGDLIPLNIDKRFVMLRNSSGFYSYAIYEHLKE 147
           EATDFKVIVENDEQIELSFSRTYNSS GGDLIPLNIDKRFVMLRNSSGFYSYAIYEHLKE
Sbjct: 61  EATDFKVIVENDEQIELSFSRTYNSSTGGDLIPLNIDKRFVMLRNSSGFYSYAIYEHLKE 120

Query: 148 WPAFIIDNTRIVFKLRKDKFRYMAVADKRQRFMPLPDDRKPPRGEALAYPEAVLLVDPVE 207
           WPAFIIDNTRIVFK RKDKF YMAVADKRQRFMPLPDDRKPP+GEALAYPEAVLLVDP+E
Sbjct: 121 WPAFIIDNTRIVFKPRKDKFHYMAVADKRQRFMPLPDDRKPPQGEALAYPEAVLLVDPIE 180

Query: 208 PELKGEVDDKYQYGCESKDARVHGWISTDPPIGLWQIAATEEFRSGGPLKQFLTSHVGPT 267
           PE KGEVDDKYQYGCESKDARVHGWISTDPPIG W IA TEEFRSGGPLKQFLTSHVGPT
Sbjct: 181 PEFKGEVDDKYQYGCESKDARVHGWISTDPPIGFWHIAPTEEFRSGGPLKQFLTSHVGPT 240

Query: 268 TLTVFHSAHYAGEDMVIKFGSNEPWKKVFGPIFIHLNSLPEGEDPLTLWDNAKKQMMVEV 327
           TLTVFHSAHYAGEDMV+KFG NEPWKKVFGPIFIHLNS PEGEDPL LW NAK+QMM EV
Sbjct: 241 TLTVFHSAHYAGEDMVVKFGCNEPWKKVFGPIFIHLNSFPEGEDPLRLWQNAKEQMMAEV 300

Query: 328 QSWPYGFPASEDFLKSDQRGTVSGRLIMRERFVSDESVPASGAYVGLALPGELGSWQTES 387
           QSWPYGF ASEDF KSDQRGTV+GRLI+RER+VSDE VPASGAYVGLALPGELGSWQTES
Sbjct: 301 QSWPYGFLASEDFPKSDQRGTVNGRLIIRERYVSDEYVPASGAYVGLALPGELGSWQTES 360

Query: 388 KGYQFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQYNRFIAVTPGSDINVGELVFE 447
           KGYQFWTRADQNG FSL+NVRSGNYSLYGWVPNFIGNYQYN FIAVTPGSDINVGELVFE
Sbjct: 361 KGYQFWTRADQNGSFSLNNVRSGNYSLYGWVPNFIGNYQYNAFIAVTPGSDINVGELVFE 420

Query: 448 PPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDKFRQYGLWERYAELYPDEDL 507
           PPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSD+FRQYGLWERY ELYPDEDL
Sbjct: 421 PPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDRFRQYGLWERYTELYPDEDL 480

Query: 508 VYTVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHGTYRLRLALATAHAAE 567
           VYTV LS+YRKDWFFAQVTRKI DNKYAGTTWKIKFQLDSPDTHGTYRLRLALATAHAAE
Sbjct: 481 VYTVDLSDYRKDWFFAQVTRKIEDNKYAGTTWKIKFQLDSPDTHGTYRLRLALATAHAAE 540

Query: 568 LQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPGGELVVGNNTILLTQAS 627
           LQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYR+YTVDIPGGELVVGNNTILLTQAS
Sbjct: 541 LQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRLYTVDIPGGELVVGNNTILLTQAS 600

Query: 628 SNSPFVGIMYDYIRLEGPLSSKM 651
           SNSPFVGIMYDYIRLEGPL+SKM
Sbjct: 601 SNSPFVGIMYDYIRLEGPLTSKM 623

[Close]
BLAST of HG10013427 vs. NCBI nr
Match: XP_038899393.1 (probable rhamnogalacturonate lyase B isoform X1 [Benincasa hispida])

HSP 1 Score: 1235.7 bits (3196), Expect = 0.0e+00
Identity = 584/623 (93.74%), Postives = 600/623 (96.31%), Query Frame = 0 

Query: 28  MDNGIIGVNLSNPNGMVIGIQYKEIENLLEVDNAEDDRGYWDIVWNVAGSSGTKGIFDRI 87
           MDNGIIGVNLSNP GMVIGIQYK +ENLLEV NAEDDRGYWDIVWN+AGSSGTKGIFDR+
Sbjct: 1   MDNGIIGVNLSNPKGMVIGIQYKGVENLLEVGNAEDDRGYWDIVWNLAGSSGTKGIFDRL 60

Query: 88  EATDFKVIVENDEQIELSFSRTYNSSIGGDLIPLNIDKRFVMLRNSSGFYSYAIYEHLKE 147
           EATDFKVIVENDEQIELSFSRTYNSS GGDLIPLNIDKRFVMLRNSSGFYSYAIYEHLKE
Sbjct: 61  EATDFKVIVENDEQIELSFSRTYNSSTGGDLIPLNIDKRFVMLRNSSGFYSYAIYEHLKE 120

Query: 148 WPAFIIDNTRIVFKLRKDKFRYMAVADKRQRFMPLPDDRKPPRGEALAYPEAVLLVDPVE 207
           WPAFIIDNTRIVFK RKDKF YMAVADKRQRFMPLPDDRKPP+GEALAYPEAVLLVDP+E
Sbjct: 121 WPAFIIDNTRIVFKPRKDKFHYMAVADKRQRFMPLPDDRKPPQGEALAYPEAVLLVDPIE 180

Query: 208 PELKGEVDDKYQYGCESKDARVHGWISTDPPIGLWQIAATEEFRSGGPLKQFLTSHVGPT 267
           PE KGEVDDKYQYGCESKDARVHGWISTDPPIG W IA TEEFRSGGPLKQFLTSHVGPT
Sbjct: 181 PEFKGEVDDKYQYGCESKDARVHGWISTDPPIGFWHIAPTEEFRSGGPLKQFLTSHVGPT 240

Query: 268 TLTVFHSAHYAGEDMVIKFGSNEPWKKVFGPIFIHLNSLPEGEDPLTLWDNAKKQMMVEV 327
           TLTVFHSAHYAGEDMV+KFG NEPWKKVFGPIFIHLNS PEGEDPL LW NAK+QMM EV
Sbjct: 241 TLTVFHSAHYAGEDMVVKFGCNEPWKKVFGPIFIHLNSFPEGEDPLRLWQNAKEQMMAEV 300

Query: 328 QSWPYGFPASEDFLKSDQRGTVSGRLIMRERFVSDESVPASGAYVGLALPGELGSWQTES 387
           QSWPYGF ASEDF KSDQRGTV+GRLI+RER+VSDE VPASGAYVGLALPGELGSWQTES
Sbjct: 301 QSWPYGFLASEDFPKSDQRGTVNGRLIIRERYVSDEYVPASGAYVGLALPGELGSWQTES 360

Query: 388 KGYQFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQYNRFIAVTPGSDINVGELVFE 447
           KGYQFWTRADQNG FSL+NVRSGNYSLYGWVPNFIGNYQYN FIAVTPGSDINVGELVFE
Sbjct: 361 KGYQFWTRADQNGSFSLNNVRSGNYSLYGWVPNFIGNYQYNAFIAVTPGSDINVGELVFE 420

Query: 448 PPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDKFRQYGLWERYAELYPDEDL 507
           PPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSD+FRQYGLWERY ELYPDEDL
Sbjct: 421 PPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDRFRQYGLWERYTELYPDEDL 480

Query: 508 VYTVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHGTYRLRLALATAHAAE 567
           VYTV LS+YRKDWFFAQVTRKI DNKYAGTTWKIKFQLDSPDTHGTYRLRLALATAHAAE
Sbjct: 481 VYTVDLSDYRKDWFFAQVTRKIEDNKYAGTTWKIKFQLDSPDTHGTYRLRLALATAHAAE 540

Query: 568 LQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPGGELVVGNNTILLTQAS 627
           LQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYR+YTVDIPGGELVVGNNTILLTQAS
Sbjct: 541 LQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRLYTVDIPGGELVVGNNTILLTQAS 600

Query: 628 SNSPFVGIMYDYIRLEGPLSSKM 651
           SNSPFVGIMYDYIRLEGPL+SK+
Sbjct: 601 SNSPFVGIMYDYIRLEGPLTSKI 623

[Close]
BLAST of HG10013427 vs. NCBI nr
Match: KAA0038654.1 (putative rhamnogalacturonate lyase B isoform X1 [Cucumis melo var. makuwa] >TYK31257.1 putative rhamnogalacturonate lyase B isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1225.3 bits (3169), Expect = 0.0e+00
Identity = 577/638 (90.44%), Postives = 602/638 (94.36%), Query Frame = 0 

Query: 14  PPPLQLRIYDQHVVMDNGIIGVNLSNPNGMVIGIQYKEIENLLEVDNAEDDRGYWDIVWN 73
           PPPLQL I DQHVVMDNGII VNLSNP GMV GI+Y  IENLL  DN EDDRGYWDIVWN
Sbjct: 14  PPPLQLHIIDQHVVMDNGIIKVNLSNPKGMVNGIEYGGIENLLSTDNDEDDRGYWDIVWN 73

Query: 74  VAGSSGTKGIFDRIEATDFKVIVENDEQIELSFSRTY-NSSIGGDLIPLNIDKRFVMLRN 133
           + GSSGTKGI DR+E TDFKVIVEN+EQIELSFSRTY NSS GG LIPLNIDKRFVMLRN
Sbjct: 74  LEGSSGTKGILDRLETTDFKVIVENEEQIELSFSRTYNNSSTGGKLIPLNIDKRFVMLRN 133

Query: 134 SSGFYSYAIYEHLKEWPAFIIDNTRIVFKLRKDKFRYMAVADKRQRFMPLPDDRKPPRGE 193
           SSGFY+YAIYEHLKEWPAF +DNTRI FK RKDKF YMAVADKRQR MPLPDDRKPPRG+
Sbjct: 134 SSGFYTYAIYEHLKEWPAFNLDNTRIAFKPRKDKFHYMAVADKRQRLMPLPDDRKPPRGQ 193

Query: 194 ALAYPEAVLLVDPVEPELKGEVDDKYQYGCESKDARVHGWISTDPPIGLWQIAATEEFRS 253
           ALAYPEAVLLVDP+EP+ KGEVDDKYQYGCESKD+RVHGWISTDPPIGLWQI+ TEEFRS
Sbjct: 194 ALAYPEAVLLVDPIEPQFKGEVDDKYQYGCESKDSRVHGWISTDPPIGLWQISPTEEFRS 253

Query: 254 GGPLKQFLTSHVGPTTLTVFHSAHYAGEDMVIKFGSNEPWKKVFGPIFIHLNSLPEGEDP 313
           GGPLKQFLTSHVGPTTLTVFHS HYAGEDMVIKFG NEPWKKVFGPIFIHLNSLPEGEDP
Sbjct: 254 GGPLKQFLTSHVGPTTLTVFHSTHYAGEDMVIKFGDNEPWKKVFGPIFIHLNSLPEGEDP 313

Query: 314 LTLWDNAKKQMMVEVQSWPYGFPASEDFLKSDQRGTVSGRLIMRERFVSDESVPASGAYV 373
           L LW NAK+QMM EVQSWPYGF ASEDF KSDQRGTVSGR ++RER+ SDESVPASGAYV
Sbjct: 314 LRLWQNAKEQMMAEVQSWPYGFIASEDFPKSDQRGTVSGRFLIRERYASDESVPASGAYV 373

Query: 374 GLALPGELGSWQTESKGYQFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQYNRFIA 433
           GLALPGELGSWQ ESKGYQFWTRADQNG FSL+NVRSGNYSLYGWVPNFIGNYQY+ FI 
Sbjct: 374 GLALPGELGSWQNESKGYQFWTRADQNGSFSLNNVRSGNYSLYGWVPNFIGNYQYSAFIV 433

Query: 434 VTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDKFRQY 493
           VTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFY+PDPNPKYINKLYVNHSD+FRQY
Sbjct: 434 VTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYIPDPNPKYINKLYVNHSDRFRQY 493

Query: 494 GLWERYAELYPDEDLVYTVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHG 553
           GLWERYAELYP+EDLVYTVGLS+Y+KDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHG
Sbjct: 494 GLWERYAELYPNEDLVYTVGLSDYKKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHG 553

Query: 554 TYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPGG 613
           TYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNT+ARHGIHGLYR+YTVDIPGG
Sbjct: 554 TYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNTVARHGIHGLYRLYTVDIPGG 613

Query: 614 ELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPLSSKM 651
           ELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPL+SKM
Sbjct: 614 ELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPLTSKM 651

[Close]
BLAST of HG10013427 vs. NCBI nr
Match: XP_008466140.2 (PREDICTED: probable rhamnogalacturonate lyase B isoform X1 [Cucumis melo])

HSP 1 Score: 1225.3 bits (3169), Expect = 0.0e+00
Identity = 577/638 (90.44%), Postives = 602/638 (94.36%), Query Frame = 0 

Query: 14  PPPLQLRIYDQHVVMDNGIIGVNLSNPNGMVIGIQYKEIENLLEVDNAEDDRGYWDIVWN 73
           PPPLQL I DQHVVMDNGII VNLSNP GMV GI+Y  IENLL  DN EDDRGYWDIVWN
Sbjct: 46  PPPLQLHIIDQHVVMDNGIIKVNLSNPKGMVNGIEYGGIENLLSTDNDEDDRGYWDIVWN 105

Query: 74  VAGSSGTKGIFDRIEATDFKVIVENDEQIELSFSRTY-NSSIGGDLIPLNIDKRFVMLRN 133
           + GSSGTKGI DR+E TDFKVIVEN+EQIELSFSRTY NSS GG LIPLNIDKRFVMLRN
Sbjct: 106 LEGSSGTKGILDRLETTDFKVIVENEEQIELSFSRTYNNSSTGGKLIPLNIDKRFVMLRN 165

Query: 134 SSGFYSYAIYEHLKEWPAFIIDNTRIVFKLRKDKFRYMAVADKRQRFMPLPDDRKPPRGE 193
           SSGFY+YAIYEHLKEWPAF +DNTRI FK RKDKF YMAVADKRQR MPLPDDRKPPRG+
Sbjct: 166 SSGFYTYAIYEHLKEWPAFNLDNTRIAFKPRKDKFHYMAVADKRQRLMPLPDDRKPPRGQ 225

Query: 194 ALAYPEAVLLVDPVEPELKGEVDDKYQYGCESKDARVHGWISTDPPIGLWQIAATEEFRS 253
           ALAYPEAVLLVDP+EP+ KGEVDDKYQYGCESKD+RVHGWISTDPPIGLWQI+ TEEFRS
Sbjct: 226 ALAYPEAVLLVDPIEPQFKGEVDDKYQYGCESKDSRVHGWISTDPPIGLWQISPTEEFRS 285

Query: 254 GGPLKQFLTSHVGPTTLTVFHSAHYAGEDMVIKFGSNEPWKKVFGPIFIHLNSLPEGEDP 313
           GGPLKQFLTSHVGPTTLTVFHS HYAGEDMVIKFG NEPWKKVFGPIFIHLNSLPEGEDP
Sbjct: 286 GGPLKQFLTSHVGPTTLTVFHSTHYAGEDMVIKFGDNEPWKKVFGPIFIHLNSLPEGEDP 345

Query: 314 LTLWDNAKKQMMVEVQSWPYGFPASEDFLKSDQRGTVSGRLIMRERFVSDESVPASGAYV 373
           L LW NAK+QMM EVQSWPYGF ASEDF KSDQRGTVSGR ++RER+ SDESVPASGAYV
Sbjct: 346 LRLWQNAKEQMMAEVQSWPYGFIASEDFPKSDQRGTVSGRFLIRERYASDESVPASGAYV 405

Query: 374 GLALPGELGSWQTESKGYQFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQYNRFIA 433
           GLALPGELGSWQ ESKGYQFWTRADQNG FSL+NVRSGNYSLYGWVPNFIGNYQY+ FI 
Sbjct: 406 GLALPGELGSWQNESKGYQFWTRADQNGSFSLNNVRSGNYSLYGWVPNFIGNYQYSAFIV 465

Query: 434 VTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDKFRQY 493
           VTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFY+PDPNPKYINKLYVNHSD+FRQY
Sbjct: 466 VTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYIPDPNPKYINKLYVNHSDRFRQY 525

Query: 494 GLWERYAELYPDEDLVYTVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHG 553
           GLWERYAELYP+EDLVYTVGLS+Y+KDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHG
Sbjct: 526 GLWERYAELYPNEDLVYTVGLSDYKKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHG 585

Query: 554 TYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPGG 613
           TYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNT+ARHGIHGLYR+YTVDIPGG
Sbjct: 586 TYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNTVARHGIHGLYRLYTVDIPGG 645

Query: 614 ELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPLSSKM 651
           ELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPL+SKM
Sbjct: 646 ELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPLTSKM 683

[Close]
BLAST of HG10013427 vs. NCBI nr
Match: XP_038899394.1 (probable rhamnogalacturonate lyase C isoform X2 [Benincasa hispida])

HSP 1 Score: 1222.2 bits (3161), Expect = 0.0e+00
Identity = 580/623 (93.10%), Postives = 596/623 (95.67%), Query Frame = 0 

Query: 28  MDNGIIGVNLSNPNGMVIGIQYKEIENLLEVDNAEDDRGYWDIVWNVAGSSGTKGIFDRI 87
           MDNGIIGVNLSNP GMVIGIQYK +ENLLEV NAEDDRGYWDIVWN+AGSSGTKGIFDR+
Sbjct: 1   MDNGIIGVNLSNPKGMVIGIQYKGVENLLEVGNAEDDRGYWDIVWNLAGSSGTKGIFDRL 60

Query: 88  EATDFKVIVENDEQIELSFSRTYNSSIGGDLIPLNIDKRFVMLRNSSGFYSYAIYEHLKE 147
           EATDFKVIVENDEQIELSFSRTYNSS GGDLIPLNIDKRFVMLRNSSGFYSYAIYEHLKE
Sbjct: 61  EATDFKVIVENDEQIELSFSRTYNSSTGGDLIPLNIDKRFVMLRNSSGFYSYAIYEHLKE 120

Query: 148 WPAFIIDNTRIVFKLRKDKFRYMAVADKRQRFMPLPDDRKPPRGEALAYPEAVLLVDPVE 207
           WPAFIIDNTRIVFK RKDKF YMAVADKRQRFMPLPDDRKPP+GEALAYPEAVLLVDP+E
Sbjct: 121 WPAFIIDNTRIVFKPRKDKFHYMAVADKRQRFMPLPDDRKPPQGEALAYPEAVLLVDPIE 180

Query: 208 PELKGEVDDKYQYGCESKDARVHGWISTDPPIGLWQIAATEEFRSGGPLKQFLTSHVGPT 267
           PE KGEVDDKYQYGCESKDARVHGWISTDPPIG W IA TEEFRSGGPLKQFLTSHVGPT
Sbjct: 181 PEFKGEVDDKYQYGCESKDARVHGWISTDPPIGFWHIAPTEEFRSGGPLKQFLTSHVGPT 240

Query: 268 TLTVFHSAHYAGEDMVIKFGSNEPWKKVFGPIFIHLNSLPEGEDPLTLWDNAKKQMMVEV 327
           TLTVFHSAHYAGEDMV+KFG NEPWKKVFGPIFIHLNS PEGEDPL LW NAK+QMM EV
Sbjct: 241 TLTVFHSAHYAGEDMVVKFGCNEPWKKVFGPIFIHLNSFPEGEDPLRLWQNAKEQMMAEV 300

Query: 328 QSWPYGFPASEDFLKSDQRGTVSGRLIMRERFVSDESVPASGAYVGLALPGELGSWQTES 387
           QSWPYGF ASEDF KSDQRGTV+GRLI+RER+VSDE VPASGAYVGLALPGELGSWQTES
Sbjct: 301 QSWPYGFLASEDFPKSDQRGTVNGRLIIRERYVSDEYVPASGAYVGLALPGELGSWQTES 360

Query: 388 KGYQFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQYNRFIAVTPGSDINVGELVFE 447
           KGYQFWTRADQNG FSL+NVRSGNYSLYGWVPNFIGNYQYN FIAVTPGSDINVGELVFE
Sbjct: 361 KGYQFWTRADQNGSFSLNNVRSGNYSLYGWVPNFIGNYQYNAFIAVTPGSDINVGELVFE 420

Query: 448 PPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDKFRQYGLWERYAELYPDEDL 507
           PPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSD+FRQYGLWERY ELYPDEDL
Sbjct: 421 PPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDRFRQYGLWERYTELYPDEDL 480

Query: 508 VYTVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHGTYRLRLALATAHAAE 567
           VYTV LS+YRKDWFFAQ    I DNKYAGTTWKIKFQLDSPDTHGTYRLRLALATAHAAE
Sbjct: 481 VYTVDLSDYRKDWFFAQ----IEDNKYAGTTWKIKFQLDSPDTHGTYRLRLALATAHAAE 540

Query: 568 LQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPGGELVVGNNTILLTQAS 627
           LQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYR+YTVDIPGGELVVGNNTILLTQAS
Sbjct: 541 LQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRLYTVDIPGGELVVGNNTILLTQAS 600

Query: 628 SNSPFVGIMYDYIRLEGPLSSKM 651
           SNSPFVGIMYDYIRLEGPL+SK+
Sbjct: 601 SNSPFVGIMYDYIRLEGPLTSKI 619

[Close]
BLAST of HG10013427 vs. ExPASy Swiss-Prot
Match: Q8RJP2 (Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) OX=198628 GN=rhiE PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.4e-31
Identity = 146/561 (26.02%), Postives = 222/561 (39.57%), Query Frame = 0 

Query: 93  KVIVENDEQIELSFSRTYNSSIGGDLIPLNIDKRFVMLRNSSGFYSYAIYEHLKEWPAFI 152
           +VI +  +Q+ L++    N         L ++   +M R+ SG YSY +  +    P  +
Sbjct: 100 EVIKQTPDQVHLAYIDDQNGK-------LRLEYHLIMTRDVSGLYSYVVAANTGSAPVTV 159

Query: 153 IDNTRIVFKLRKDKFRYMAVADKRQRFMPLPDDRKPPRGEALAYPEAVLLVDPVEPELKG 212
            +   +    R D  R   + +  +R  PL  D      E    P+   + D       G
Sbjct: 160 SELRNV---YRFDATRLDTLFNSIRRGTPLLYD------ELEQLPK---VQDETWRLPDG 219

Query: 213 EVDDKYQYGCESKDARVHGWISTDPPIGLWQIAATEEFRSGGPLKQFLTSHVGPTTLTVF 272
            V  KY +    +++R  G +      G W + A+ E+ SG  LKQ L  H     L   
Sbjct: 220 SVYSKYDFAGYQRESRYWGVMGNG--YGAWMVPASGEYYSGDALKQELLVHQDAIILNYL 279

Query: 273 HSAHYAGEDMVIKFGSNEPWKKVFGPIFIHLNSLPEGEDPLTLWDNAKKQMMVEVQSWPY 332
             +H+   DMV + G    ++K++GP  +++N   +G D   + D   ++   E  SWPY
Sbjct: 280 TGSHFGTPDMVAQPG----FEKLYGPWLLYIN---QGNDRELVAD-VSRRAEHERASWPY 339

Query: 333 GFPASEDFLKSDQRGTVSGRLIMRERFVSDESVPASGAYVGLALPGELGSWQTESKGYQF 392
            +   +D     QR TVSGRL                 +  + L     ++  ++ GY F
Sbjct: 340 RW--LDDARYPRQRATVSGRL------------RTEAPHATVVLNSSAENFDIQTTGYLF 399

Query: 393 WTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQYNRFIAVT---PGSDINVGELVFEPP 452
             R +++G FSL NV  G Y L  +     G  Q       T    G    +G++    P
Sbjct: 400 SARTNRDGRFSLSNVPPGEYRLSAYAD---GGTQIGLLAQQTVRVEGKKTRLGQIDARQP 459

Query: 453 RDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDKFRQYGLWERYAELYPDEDLVY 512
              P  W IG  DR A EF                  DK RQY    R+    P  DL +
Sbjct: 460 --APLAWAIGQADRRADEF---------------RFGDKPRQY----RWQTEVP-ADLTF 519

Query: 513 TVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHGTYRLRLALAT------- 572
            +G S  RKDW++AQ             +W I F   +P+   T  + +A A+       
Sbjct: 520 EIGKSRERKDWYYAQT---------QPGSWHILFNTRTPEQPYTLNIAIAAASNNGMTTP 573

Query: 573 AHAAELQVRLNDAQALPPLFTTGLIGKDNTIARHGIH-GLYRMYTVDIPGGELVVGNNTI 632
           A + +L V+LN       L TT     D +I R  +  G Y    + +P G L  G N I
Sbjct: 580 ASSPQLAVKLNG-----QLLTTLKYDNDKSIYRGAMQSGRYHEAHIPLPAGALQQGGNRI 573

Query: 633 LLTQASSNSPFVGIMYDYIRL 643
            L           +MYD I L
Sbjct: 640 TLELLGGM-----VMYDAITL 573

[Close]
BLAST of HG10013427 vs. ExPASy Swiss-Prot
Match: A5ABH4 (Probable rhamnogalacturonate lyase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rglB PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 4.4e-17
Identity = 109/446 (24.44%), Postives = 168/446 (37.67%), Query Frame = 0 

Query: 217 KYQYGCESKDARVHGW-----ISTDPPIGLWQIAATEEFRSGGPLKQFLTSHVGPTTLTV 276
           KY +    +D  VHG       S     G W +  T++   GGPL   LT  V       
Sbjct: 216 KYTFSNAWRDNSVHGMYADGSTSNGSTFGAWLVMNTKDTYYGGPLHSDLT--VDGIVYNY 275

Query: 277 FHSAHYAGEDMVIKFGSNEPWKKVFGPIFIHLNSLPEGEDPLTLWDNAKKQM-MVEVQSW 336
             S H+      I +G    + + FGP + H N    G+         K     +   SW
Sbjct: 276 LVSNHHGEGTPNITYG----FDRTFGPQYYHFNG---GKGSTASLQELKSDAETLADPSW 335

Query: 337 PYGFPAS-----EDFLKSDQRGTVSGRLIMRERFVSDESVPASGAYVGLALPGE-LGSWQ 396
              F  S       +  S QRG+V G++ + +         A+     L + G+      
Sbjct: 336 NVDFYDSIAKHVVGYTPSSQRGSVQGKIKLPK--------GATRPIAVLTVDGQYFQDNS 395

Query: 397 TESKGYQFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQYNRFIAVTPGSDINVGEL 456
             S  YQ+W   D +G FS+D+V+ G Y L  +     G++  +  + V  G    + E 
Sbjct: 396 VNSSSYQYWAEIDDSGHFSVDHVKEGPYRLTVYADGIFGDFVRDG-VQVKAGKKTTIQE- 455

Query: 457 VFEPPRDGPTLWEIGIPDRTAAEF---YVPDPNPKYINKLYVNHSDKFRQYGLWERYAEL 516
            +E    G  +W +G PD+++ EF      DP        +  H  ++  Y     +   
Sbjct: 456 TWEAESAGTEIWRLGTPDKSSGEFRHGVARDPT-------HPLHPPEYLIYWGAYDWQSD 515

Query: 517 YPDEDLVYTVGLSEYRKD-----WFFAQVTRKIGDNKYAGT-TWKIKFQLDSPD----TH 576
           +PD  + YT+G S+   D     W     T      +Y  T  W I F L   D    + 
Sbjct: 516 FPD-GINYTIGTSDPATDLNTVHWSVFGPTPNDPRVEYDTTHDWTINFPLSEDDLAERSK 575

Query: 577 GTYRLRLALATA--------HAAE------LQVRLNDAQALPPLFTTGLIGKDNTIARHG 624
            T  ++LA A A        +A+E      L+  +ND QA P     G     + I R  
Sbjct: 576 ATLTIQLAGAKAASGNTDVYNASEPYTNLALESYIND-QAEPLTLLIGFNQSSSCIVRSA 633

[Close]
BLAST of HG10013427 vs. ExPASy Swiss-Prot
Match: Q5AZ85 (Rhamnogalacturonate lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rglB PE=2 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 4.9e-16
Identity = 133/572 (23.25%), Postives = 217/572 (37.94%), Query Frame = 0 

Query: 134 SGFYSYAIYEHLKEWPAFI--IDNTRIVFKLRKDKFRYMAVADKRQRFMPLPDDRKPPRG 193
           +GF+ ++   +  E   F+  +   R +F+   D + ++  +D +    PLP D      
Sbjct: 130 TGFHMFSRLAYYNETTPFLRNLQELRTLFRPNTDLWTHLTSSDLQT--APLPSD------ 189

Query: 194 EALAYPEAVLLVDPVEPELKGEVDD-----------KYQYGCESKDARVHGW-----IST 253
           EA+A     ++V      L    DD           KY +    +D  VHG       S 
Sbjct: 190 EAIA---EQIVVQDATWRLNNTPDDAYYQQFSEYFTKYTFSNHWRDNDVHGLYADGSTSD 249

Query: 254 DPPIGLWQIAATEEFRSGGPLKQFLTSHVGPTTLTVFHSAHYAGEDMVIKFGSNEPWKKV 313
               G W +  T++   GGPL   LT  V         S H+      I  G    + + 
Sbjct: 250 GTTYGAWLVMNTKDTYYGGPLHSDLT--VDGIIYNYIVSNHHGEGTPNITNG----FDRT 309

Query: 314 FGPIFIHLNSLPEGEDPLTLWDNAKKQMMVEVQSWPYGFPAS-----EDFLKSDQRGTVS 373
           FGP F   N    G    +L +   +   +   SW   F  S       ++ S QRG+V 
Sbjct: 310 FGPQFYLFN----GGGSSSLEELRDEARSLASPSWNADFYDSIAKHVIGYVPSSQRGSVK 369

Query: 374 GRLIMRERFVSDESV-PASGAYV--GLALPGELGSWQTESKGYQFWTRADQNGCFSLDNV 433
           G + + +   S  +V    G Y     A+P            +Q+W   D+NG FS+D V
Sbjct: 370 GTIKLPKNAKSPIAVLTVDGHYFQDNSAVP----------SSHQYWADIDKNGRFSIDRV 429

Query: 434 RSGNYSLYGWVPNFIGNYQYNRFIAVTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAE 493
            +G Y L  +     G++  +  I V      ++ E  ++P   G  +W +G PD+++ E
Sbjct: 430 VAGKYRLTVYADGIFGDFTRDG-IVVKARKSTSIKE-TWKPESAGTEIWRLGTPDKSSGE 489

Query: 494 F---YVPDPNPKYINKLYVNHSDKFRQY-GLWERYAELYPDEDLVYTVGLSEYRKDWFFA 553
           F      DP        +  H  ++  Y G ++  ++     D  Y +G S+   D+   
Sbjct: 490 FRHGAARDPT-------HPRHPPEYLIYWGAYDWQSDFPGGID--YMIGESDPATDFNTV 549

Query: 554 Q--VTRKIGDNKYA--GTT--WKIKFQLDSPDTHG--TYRLRLALATAHAAE-------- 613
              V     DN  A   TT  W+I+F L +   H   T  L + LA A AA         
Sbjct: 550 HWAVFGPTPDNPVAESNTTHDWRIRFDLSAKQLHARKTATLTIQLAGAKAASGNTDVYNA 609

Query: 614 --------LQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPGGELVVGNN 644
                   L+  +N+ Q  P     G     + I R  +         + P   L  G+N
Sbjct: 610 SEPYANLPLRSYINE-QEEPLTMVIGYDQSSSCIVRSAVSCYQVREKWEFPASWLKEGSN 658

[Close]
BLAST of HG10013427 vs. ExPASy Swiss-Prot
Match: B8NCU7 (Probable rhamnogalacturonate lyase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rglA PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.2e-07
Identity = 67/242 (27.69%), Postives = 100/242 (41.32%), Query Frame = 0 

Query: 391 QFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQY-NRFIAVTPGSDINVGELVFEPP 450
           Q+WT    +G F+   ++ G+Y++      + G Y+     ++VT GS  +     F   
Sbjct: 303 QYWTYTSSDGSFTSPAMKPGDYTMV----YYQGEYKVAETSVSVTAGSSTSKDISGF--V 362

Query: 451 RDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDKFRQYGLWERYAELYPDEDLVY 510
             G T+++IG  D T   F   +      N+L ++ SD         R +   P   L Y
Sbjct: 363 ETGDTIFKIGDWDGTPTGFRNAE------NQLRMHPSD--------SRMSSWGP---LTY 422

Query: 511 TVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHGTYRLRLALATAHA-AEL 570
           TVG SE   D+  A         K       IKF   S  T G   LR+    + A    
Sbjct: 423 TVGSSEL-TDFPMAAF-------KGVNDPVTIKFTATSAQT-GAATLRIGTTLSFAGGRP 482

Query: 571 QVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPGGELVVGNNTILLTQASS 630
           Q  +ND +   P   T L      + R    GL  +Y V+IP G +V G NTI ++  S 
Sbjct: 483 QATINDYEGSAPSAPTNL--NSRGVTRGAYRGLGEVYDVNIPSGTIVEGENTITISVISG 510

[Close]
BLAST of HG10013427 vs. ExPASy Swiss-Prot
Match: Q2U0Q1 (Probable rhamnogalacturonate lyase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rglA PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.1e-07
Identity = 66/242 (27.27%), Postives = 101/242 (41.74%), Query Frame = 0 

Query: 391 QFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQY-NRFIAVTPGSDINVGELVFEPP 450
           Q+WT    +G F+   ++ G+Y++      + G Y+     ++VT GS  +  + +    
Sbjct: 303 QYWTYTSSDGSFTSPAMKPGDYTMV----YYQGEYKVAETSVSVTVGS--STSKDISGSV 362

Query: 451 RDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDKFRQYGLWERYAELYPDEDLVY 510
             G T+++IG  D T   F   +      N+L ++ SD         R +   P   L Y
Sbjct: 363 ETGDTIFKIGDWDGTPTGFRNAE------NQLRMHPSD--------SRMSSWGP---LTY 422

Query: 511 TVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHGTYRLRLALATAHA-AEL 570
           TVG SE   D+  A         K       IKF   S  T G   LR+    + A    
Sbjct: 423 TVGSSEL-TDFPMAAF-------KGVNDPVTIKFTATSAQT-GAATLRIGTTLSFAGGRP 482

Query: 571 QVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPGGELVVGNNTILLTQASS 630
           Q  +ND +   P   T L      + R    GL  +Y V+IP G +V G NTI ++  S 
Sbjct: 483 QATINDYEGSAPSAPTNL--NSRGVTRGAYRGLGEVYDVNIPSGTIVEGENTITISVISG 510

[Close]
BLAST of HG10013427 vs. ExPASy TrEMBL
Match: A0A5A7T5B7 (Rhamnogalacturonan endolyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005460 PE=3 SV=1)

HSP 1 Score: 1225.3 bits (3169), Expect = 0.0e+00
Identity = 577/638 (90.44%), Postives = 602/638 (94.36%), Query Frame = 0 

Query: 14  PPPLQLRIYDQHVVMDNGIIGVNLSNPNGMVIGIQYKEIENLLEVDNAEDDRGYWDIVWN 73
           PPPLQL I DQHVVMDNGII VNLSNP GMV GI+Y  IENLL  DN EDDRGYWDIVWN
Sbjct: 14  PPPLQLHIIDQHVVMDNGIIKVNLSNPKGMVNGIEYGGIENLLSTDNDEDDRGYWDIVWN 73

Query: 74  VAGSSGTKGIFDRIEATDFKVIVENDEQIELSFSRTY-NSSIGGDLIPLNIDKRFVMLRN 133
           + GSSGTKGI DR+E TDFKVIVEN+EQIELSFSRTY NSS GG LIPLNIDKRFVMLRN
Sbjct: 74  LEGSSGTKGILDRLETTDFKVIVENEEQIELSFSRTYNNSSTGGKLIPLNIDKRFVMLRN 133

Query: 134 SSGFYSYAIYEHLKEWPAFIIDNTRIVFKLRKDKFRYMAVADKRQRFMPLPDDRKPPRGE 193
           SSGFY+YAIYEHLKEWPAF +DNTRI FK RKDKF YMAVADKRQR MPLPDDRKPPRG+
Sbjct: 134 SSGFYTYAIYEHLKEWPAFNLDNTRIAFKPRKDKFHYMAVADKRQRLMPLPDDRKPPRGQ 193

Query: 194 ALAYPEAVLLVDPVEPELKGEVDDKYQYGCESKDARVHGWISTDPPIGLWQIAATEEFRS 253
           ALAYPEAVLLVDP+EP+ KGEVDDKYQYGCESKD+RVHGWISTDPPIGLWQI+ TEEFRS
Sbjct: 194 ALAYPEAVLLVDPIEPQFKGEVDDKYQYGCESKDSRVHGWISTDPPIGLWQISPTEEFRS 253

Query: 254 GGPLKQFLTSHVGPTTLTVFHSAHYAGEDMVIKFGSNEPWKKVFGPIFIHLNSLPEGEDP 313
           GGPLKQFLTSHVGPTTLTVFHS HYAGEDMVIKFG NEPWKKVFGPIFIHLNSLPEGEDP
Sbjct: 254 GGPLKQFLTSHVGPTTLTVFHSTHYAGEDMVIKFGDNEPWKKVFGPIFIHLNSLPEGEDP 313

Query: 314 LTLWDNAKKQMMVEVQSWPYGFPASEDFLKSDQRGTVSGRLIMRERFVSDESVPASGAYV 373
           L LW NAK+QMM EVQSWPYGF ASEDF KSDQRGTVSGR ++RER+ SDESVPASGAYV
Sbjct: 314 LRLWQNAKEQMMAEVQSWPYGFIASEDFPKSDQRGTVSGRFLIRERYASDESVPASGAYV 373

Query: 374 GLALPGELGSWQTESKGYQFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQYNRFIA 433
           GLALPGELGSWQ ESKGYQFWTRADQNG FSL+NVRSGNYSLYGWVPNFIGNYQY+ FI 
Sbjct: 374 GLALPGELGSWQNESKGYQFWTRADQNGSFSLNNVRSGNYSLYGWVPNFIGNYQYSAFIV 433

Query: 434 VTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDKFRQY 493
           VTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFY+PDPNPKYINKLYVNHSD+FRQY
Sbjct: 434 VTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYIPDPNPKYINKLYVNHSDRFRQY 493

Query: 494 GLWERYAELYPDEDLVYTVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHG 553
           GLWERYAELYP+EDLVYTVGLS+Y+KDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHG
Sbjct: 494 GLWERYAELYPNEDLVYTVGLSDYKKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHG 553

Query: 554 TYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPGG 613
           TYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNT+ARHGIHGLYR+YTVDIPGG
Sbjct: 554 TYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNTVARHGIHGLYRLYTVDIPGG 613

Query: 614 ELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPLSSKM 651
           ELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPL+SKM
Sbjct: 614 ELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPLTSKM 651

[Close]
BLAST of HG10013427 vs. ExPASy TrEMBL
Match: A0A1S3CQI8 (Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103503645 PE=3 SV=1)

HSP 1 Score: 1225.3 bits (3169), Expect = 0.0e+00
Identity = 577/638 (90.44%), Postives = 602/638 (94.36%), Query Frame = 0 

Query: 14  PPPLQLRIYDQHVVMDNGIIGVNLSNPNGMVIGIQYKEIENLLEVDNAEDDRGYWDIVWN 73
           PPPLQL I DQHVVMDNGII VNLSNP GMV GI+Y  IENLL  DN EDDRGYWDIVWN
Sbjct: 46  PPPLQLHIIDQHVVMDNGIIKVNLSNPKGMVNGIEYGGIENLLSTDNDEDDRGYWDIVWN 105

Query: 74  VAGSSGTKGIFDRIEATDFKVIVENDEQIELSFSRTY-NSSIGGDLIPLNIDKRFVMLRN 133
           + GSSGTKGI DR+E TDFKVIVEN+EQIELSFSRTY NSS GG LIPLNIDKRFVMLRN
Sbjct: 106 LEGSSGTKGILDRLETTDFKVIVENEEQIELSFSRTYNNSSTGGKLIPLNIDKRFVMLRN 165

Query: 134 SSGFYSYAIYEHLKEWPAFIIDNTRIVFKLRKDKFRYMAVADKRQRFMPLPDDRKPPRGE 193
           SSGFY+YAIYEHLKEWPAF +DNTRI FK RKDKF YMAVADKRQR MPLPDDRKPPRG+
Sbjct: 166 SSGFYTYAIYEHLKEWPAFNLDNTRIAFKPRKDKFHYMAVADKRQRLMPLPDDRKPPRGQ 225

Query: 194 ALAYPEAVLLVDPVEPELKGEVDDKYQYGCESKDARVHGWISTDPPIGLWQIAATEEFRS 253
           ALAYPEAVLLVDP+EP+ KGEVDDKYQYGCESKD+RVHGWISTDPPIGLWQI+ TEEFRS
Sbjct: 226 ALAYPEAVLLVDPIEPQFKGEVDDKYQYGCESKDSRVHGWISTDPPIGLWQISPTEEFRS 285

Query: 254 GGPLKQFLTSHVGPTTLTVFHSAHYAGEDMVIKFGSNEPWKKVFGPIFIHLNSLPEGEDP 313
           GGPLKQFLTSHVGPTTLTVFHS HYAGEDMVIKFG NEPWKKVFGPIFIHLNSLPEGEDP
Sbjct: 286 GGPLKQFLTSHVGPTTLTVFHSTHYAGEDMVIKFGDNEPWKKVFGPIFIHLNSLPEGEDP 345

Query: 314 LTLWDNAKKQMMVEVQSWPYGFPASEDFLKSDQRGTVSGRLIMRERFVSDESVPASGAYV 373
           L LW NAK+QMM EVQSWPYGF ASEDF KSDQRGTVSGR ++RER+ SDESVPASGAYV
Sbjct: 346 LRLWQNAKEQMMAEVQSWPYGFIASEDFPKSDQRGTVSGRFLIRERYASDESVPASGAYV 405

Query: 374 GLALPGELGSWQTESKGYQFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQYNRFIA 433
           GLALPGELGSWQ ESKGYQFWTRADQNG FSL+NVRSGNYSLYGWVPNFIGNYQY+ FI 
Sbjct: 406 GLALPGELGSWQNESKGYQFWTRADQNGSFSLNNVRSGNYSLYGWVPNFIGNYQYSAFIV 465

Query: 434 VTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDKFRQY 493
           VTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFY+PDPNPKYINKLYVNHSD+FRQY
Sbjct: 466 VTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYIPDPNPKYINKLYVNHSDRFRQY 525

Query: 494 GLWERYAELYPDEDLVYTVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHG 553
           GLWERYAELYP+EDLVYTVGLS+Y+KDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHG
Sbjct: 526 GLWERYAELYPNEDLVYTVGLSDYKKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHG 585

Query: 554 TYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPGG 613
           TYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNT+ARHGIHGLYR+YTVDIPGG
Sbjct: 586 TYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNTVARHGIHGLYRLYTVDIPGG 645

Query: 614 ELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPLSSKM 651
           ELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPL+SKM
Sbjct: 646 ELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPLTSKM 683

[Close]
BLAST of HG10013427 vs. ExPASy TrEMBL
Match: A0A0A0LE32 (Rhamnogalacturonan endolyase OS=Cucumis sativus OX=3659 GN=Csa_3G892760 PE=3 SV=1)

HSP 1 Score: 1218.8 bits (3152), Expect = 0.0e+00
Identity = 573/639 (89.67%), Postives = 604/639 (94.52%), Query Frame = 0 

Query: 14  PPPLQLRIYDQHVVMDNGIIGVNLSNPNGMVIGIQYKEIENLLEVDNAEDDRGYWDIVWN 73
           PPPLQL I DQHVVMDNGII VNLSNP GMV GI+Y+ IENLL +DN ED+RGYWDIVWN
Sbjct: 14  PPPLQLHILDQHVVMDNGIIKVNLSNPKGMVNGIEYEGIENLLSLDNDEDNRGYWDIVWN 73

Query: 74  VAGSSGTKGIFDRIEATDFKVIVENDEQIELSFSRTY--NSSIGGDLIPLNIDKRFVMLR 133
           + GSSGTKGIFDR+EATDFKVIVEN+EQIELSFSRTY  NSS GG+LIPLNIDKRFVMLR
Sbjct: 74  LKGSSGTKGIFDRLEATDFKVIVENEEQIELSFSRTYNNNSSTGGNLIPLNIDKRFVMLR 133

Query: 134 NSSGFYSYAIYEHLKEWPAFIIDNTRIVFKLRKDKFRYMAVADKRQRFMPLPDDRKPPRG 193
           NSSGFY+YAIYEHLKEWPAF +DNTRI FK RKDKF YMAVADKRQR MPLPDDRKPPRG
Sbjct: 134 NSSGFYTYAIYEHLKEWPAFNLDNTRIAFKPRKDKFHYMAVADKRQRLMPLPDDRKPPRG 193

Query: 194 EALAYPEAVLLVDPVEPELKGEVDDKYQYGCESKDARVHGWISTDPPIGLWQIAATEEFR 253
           +ALAYPEAVLLVDP+EP+ KGEVDDKYQYGCESKD+RVHGWISTDPPIG WQIA TEEFR
Sbjct: 194 QALAYPEAVLLVDPIEPDFKGEVDDKYQYGCESKDSRVHGWISTDPPIGFWQIAPTEEFR 253

Query: 254 SGGPLKQFLTSHVGPTTLTVFHSAHYAGEDMVIKFGSNEPWKKVFGPIFIHLNSLPEGED 313
           SGGPLKQFLTSHVGPTTLTVFHS HYAGEDMVIKFG NEPWKKV+GPIFIHLNSLPEGED
Sbjct: 254 SGGPLKQFLTSHVGPTTLTVFHSTHYAGEDMVIKFGDNEPWKKVYGPIFIHLNSLPEGED 313

Query: 314 PLTLWDNAKKQMMVEVQSWPYGFPASEDFLKSDQRGTVSGRLIMRERFVSDESVPASGAY 373
           PL LW NAK+QMM EVQSWPY F ASEDF KSDQRGTVSG++++RER+VSDESVPASGAY
Sbjct: 314 PLRLWQNAKQQMMAEVQSWPYSFIASEDFPKSDQRGTVSGKILIRERYVSDESVPASGAY 373

Query: 374 VGLALPGELGSWQTESKGYQFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQYNRFI 433
           VGLALPGELGSWQ ESKGYQFWTRADQNG FSL+NVRSGNYSLYGWVPNFIGNYQY+ FI
Sbjct: 374 VGLALPGELGSWQNESKGYQFWTRADQNGSFSLNNVRSGNYSLYGWVPNFIGNYQYSAFI 433

Query: 434 AVTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDKFRQ 493
            VTPGSDI VGELVFEPPRDGPTLWEIGIPDRTAAEFY+PDPNPKYINKLYVNHSD+FRQ
Sbjct: 434 VVTPGSDIKVGELVFEPPRDGPTLWEIGIPDRTAAEFYIPDPNPKYINKLYVNHSDRFRQ 493

Query: 494 YGLWERYAELYPDEDLVYTVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTH 553
           YGLWERYAELYPDEDLVYTVGLS+YRKDWFF+QVTRKIGDNKYAGTTWKIKFQLDSPDT+
Sbjct: 494 YGLWERYAELYPDEDLVYTVGLSDYRKDWFFSQVTRKIGDNKYAGTTWKIKFQLDSPDTN 553

Query: 554 GTYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPG 613
           GTYRLRLALATAH AELQVRLNDAQALPPLFTTGLIGKDNT+ARHGIHGLYR+YTVDIPG
Sbjct: 554 GTYRLRLALATAHGAELQVRLNDAQALPPLFTTGLIGKDNTVARHGIHGLYRLYTVDIPG 613

Query: 614 GELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPLSSKM 651
           GELVVGNNTILLTQASSNSPFVGIMYDYIRLE PL+SKM
Sbjct: 614 GELVVGNNTILLTQASSNSPFVGIMYDYIRLERPLTSKM 652

[Close]
BLAST of HG10013427 vs. ExPASy TrEMBL
Match: A0A6J1C8K5 (uncharacterized protein LOC111009378 OS=Momordica charantia OX=3673 GN=LOC111009378 PE=4 SV=1)

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 564/655 (86.11%), Postives = 604/655 (92.21%), Query Frame = 0 

Query: 2   AAAAGHDPDPAAPPPLQLRIYDQHVVMDNGIIGVNLSNPNGMVIGIQYKEIENLLEVDNA 61
           AAA G      + PPLQLRI+DQH+VMDNGI GV LSNP G V GI+Y  IENLLEV NA
Sbjct: 57  AAAGGGLGLDVSAPPLQLRIHDQHIVMDNGITGVTLSNPEGFVTGIRYNGIENLLEVGNA 116

Query: 62  EDDRGYWDIVWNVAGSSGTKGIFDRIEATDFKVIVENDEQIELSFSRTYNSSIGGDLIPL 121
           E +RGYWDIVWNVAGSSGTKGIFDRIE TDFKVIVENDEQIELSF+RTYNSS G +L+PL
Sbjct: 117 EYNRGYWDIVWNVAGSSGTKGIFDRIEGTDFKVIVENDEQIELSFTRTYNSSTGANLVPL 176

Query: 122 NIDKRFVMLRNSSGFYSYAIYEHLKEWPAFIIDNTRIVFKLRKDKFRYMAVADKRQRFMP 181
           NIDKRFVMLR SSGFYSYAIYEHL+EWPAF  DNTRIVFKLRKDKF YMAVADKRQR MP
Sbjct: 177 NIDKRFVMLRGSSGFYSYAIYEHLREWPAFDFDNTRIVFKLRKDKFGYMAVADKRQRLMP 236

Query: 182 LPDDRKPPRGEALAYPEAVLLVDPVEPELKGEVDDKYQYGCESKDARVHGWIST------ 241
            PDDR+PPRG+ALAYPEAVLL+DPVEP  +GEVDDKYQYGCESKD+RVHGWIS       
Sbjct: 237 SPDDRRPPRGQALAYPEAVLLLDPVEPRFRGEVDDKYQYGCESKDSRVHGWISAGPGPDP 296

Query: 242 DPPIGLWQIAATEEFRSGGPLKQFLTSHVGPTTLTVFHSAHYAGEDMVIKFGSNEPWKKV 301
           DPPIGLW I+ TEEFRSGGPLKQFLTSHVGPTTL+VFHSAHYAG DMVI+F +NEPWKKV
Sbjct: 297 DPPIGLWHISPTEEFRSGGPLKQFLTSHVGPTTLSVFHSAHYAGADMVIRFATNEPWKKV 356

Query: 302 FGPIFIHLNSLPEGEDPLTLWDNAKKQMMVEVQSWPYGFPASEDFLKSDQRGTVSGRLIM 361
           FGPIFI+LNSLPEG+DPL LW+NAK+QMMVEVQSWPY FPAS+DFLKSDQRGTV+GRL++
Sbjct: 357 FGPIFIYLNSLPEGDDPLRLWENAKEQMMVEVQSWPYSFPASKDFLKSDQRGTVNGRLMI 416

Query: 362 RERFVSDESVPASGAYVGLALPGELGSWQTESKGYQFWTRADQNGCFSLDNVRSGNYSLY 421
           RER+VSDESVPASGAYVGLALPGELGSWQTESKGYQFWTRAD++GCFSL+N+ +GNYSLY
Sbjct: 417 RERYVSDESVPASGAYVGLALPGELGSWQTESKGYQFWTRADKDGCFSLNNILTGNYSLY 476

Query: 422 GWVPNFIGNYQYNRFIAVTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPNP 481
           GWVPNFIG+YQYN FI +TPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPNP
Sbjct: 477 GWVPNFIGDYQYNAFITITPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPNP 536

Query: 482 KYINKLYVNHSDKFRQYGLWERYAELYPDEDLVYTVGLSEYRKDWFFAQVTRKIGDNKYA 541
           KYIN+LYVNHSDKFRQYGLWERYAELYP+EDLVYTVGLSEYRKDWFFAQVTR IGDNKY 
Sbjct: 537 KYINRLYVNHSDKFRQYGLWERYAELYPNEDLVYTVGLSEYRKDWFFAQVTRNIGDNKYE 596

Query: 542 GTTWKIKFQLDSPDTHGTYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNTIAR 601
           GTTWKIKFQLDS D HGTYRLRLALATAHAAELQVRLNDA ALPPLFTTGLIGKDNTIAR
Sbjct: 597 GTTWKIKFQLDSADAHGTYRLRLALATAHAAELQVRLNDAHALPPLFTTGLIGKDNTIAR 656

Query: 602 HGIHGLYRMYTVDIPGGELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPLSSKM 651
           HGIHGLYR+YTVDIPG ELVVGNNTILLTQ +SNSPFVGIMYDY+RLEGPL+SKM
Sbjct: 657 HGIHGLYRLYTVDIPGCELVVGNNTILLTQINSNSPFVGIMYDYLRLEGPLTSKM 711

[Close]
BLAST of HG10013427 vs. ExPASy TrEMBL
Match: A0A6J1FIG7 (probable rhamnogalacturonate lyase B isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445776 PE=4 SV=1)

HSP 1 Score: 1112.8 bits (2877), Expect = 0.0e+00
Identity = 519/648 (80.09%), Postives = 576/648 (88.89%), Query Frame = 0 

Query: 6   GHDPDPAAPPP----LQLRIYDQHVVMDNGIIGVNLSNPNGMVIGIQYKEIENLLEVDNA 65
           GH PD  +P      LQL I +Q+VVM+N II V +SNP G V GIQY  IENLL+V N 
Sbjct: 65  GHSPDGHSPNASVSLLQLHIQEQYVVMENEIIAVTISNPMGFVTGIQYHGIENLLDVTNP 124

Query: 66  EDDRGYWDIVWNVAGSSGTKGIFDRIEATDFKVIVENDEQIELSFSRTYNSSIGGDLIPL 125
           EDDRGYWD+VWN AG+ GTKG+FDRIEATDFKVIV+NDEQIELSFSRTYNSS G D++PL
Sbjct: 125 EDDRGYWDVVWNTAGAKGTKGMFDRIEATDFKVIVQNDEQIELSFSRTYNSSSGDDVVPL 184

Query: 126 NIDKRFVMLRNSSGFYSYAIYEHLKEWPAFIIDNTRIVFKLRKDKFRYMAVADKRQRFMP 185
           N+DKRFV+LRNSSGFYSYAIYEHLK+WPAF IDNTRI FK RKDKFRYM VAD+RQRFMP
Sbjct: 185 NVDKRFVILRNSSGFYSYAIYEHLKDWPAFNIDNTRIAFKPRKDKFRYMVVADERQRFMP 244

Query: 186 LPDDRKPPRGEALAYPEAVLLVDPVEPELKGEVDDKYQYGCESKDARVHGWISTDPPIGL 245
           LPDDRKPPRG AL YPEAVLLVDP+EPE KGEVDDKYQYGCESKD RVHGWIS DPPIG+
Sbjct: 245 LPDDRKPPRGVALEYPEAVLLVDPIEPEFKGEVDDKYQYGCESKDTRVHGWISNDPPIGI 304

Query: 246 WQIAATEEFRSGGPLKQFLTSHVGPTTLTVFHSAHYAGEDMVIKFGSNEPWKKVFGPIFI 305
           WQI A+EE+RSGGPLKQ LTSHVGPT+LTVFHSAHYAG  MVI+FGSNE WKKV+GP+FI
Sbjct: 305 WQITASEEYRSGGPLKQVLTSHVGPTSLTVFHSAHYAGAAMVIRFGSNEAWKKVYGPVFI 364

Query: 306 HLNSLPEGEDPLTLWDNAKKQMMVEVQSWPYGFPASEDFLKSDQRGTVSGRLIMRERFVS 365
           H+NSLPE EDPL LW NAK+QM  EVQSWPY FPAS+DF+K+DQRGTV+G L++ ER+VS
Sbjct: 365 HINSLPEKEDPLRLWQNAKEQMAAEVQSWPYNFPASKDFIKADQRGTVTGTLMIHERYVS 424

Query: 366 DESVPASGAYVGLALPGELGSWQTESKGYQFWTRADQNGCFSLDNVRSGNYSLYGWVPNF 425
           +ES+PASGAYVGLALPGELGSWQTESKGYQFW+RAD+NG F+L+NV SGNYSL GWV NF
Sbjct: 425 NESIPASGAYVGLALPGELGSWQTESKGYQFWSRADENGHFTLENVLSGNYSLNGWVYNF 484

Query: 426 IGNYQYNRFIAVTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKL 485
           I  YQY+ FI VTPGSDI+VGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDP+PK+INKL
Sbjct: 485 ISEYQYDAFITVTPGSDIDVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPSPKFINKL 544

Query: 486 YVNHSDKFRQYGLWERYAELYPDEDLVYTVGLSEYRKDWFFAQVTRKIGDNK-YAGTTWK 545
           +VNHSDKFRQYGLWERYAELYP EDLVYTV  S+Y+KDWFFAQV RKI DN  Y GTTWK
Sbjct: 545 FVNHSDKFRQYGLWERYAELYPKEDLVYTVDHSDYKKDWFFAQVNRKIDDNNTYVGTTWK 604

Query: 546 IKFQLDSPDTHGTYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNTIARHGIHG 605
           I+F++DSPDTHGTY+LRLALATAHAAELQVR+NDAQ + PLFTTG+IGKDNTIARHGIHG
Sbjct: 605 IEFKIDSPDTHGTYKLRLALATAHAAELQVRVNDAQTVTPLFTTGVIGKDNTIARHGIHG 664

Query: 606 LYRMYTVDIPGGELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPLSS 649
           LYR Y+VDIPG ELV GNNTI LTQ + + PFVGIMYDYIRLEGPL+S
Sbjct: 665 LYRFYSVDIPGSELVAGNNTIFLTQTNDHGPFVGIMYDYIRLEGPLTS 712

[Close]
BLAST of HG10013427 vs. TAIR 10
Match: AT1G09880.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 869.8 bits (2246), Expect = 1.4e-252
Identity = 395/623 (63.40%), Postives = 490/623 (78.65%), Query Frame = 0 

Query: 28  MDNGIIGVNLSNPNGMVIGIQYKEIENLLE-VDNAEDDRGYWDIVWNVAGSSG--TKGIF 87
           M+N  + + LSNP G V GIQY  I+N+L    N E DRGYWD+VWN  G     TKG  
Sbjct: 1   MENRFLQLTLSNPEGFVTGIQYNGIDNVLAYYTNKEYDRGYWDVVWNFPGKKAKKTKGTL 60

Query: 88  DRIEATDFKVIVENDEQIELSFSRTYNSSIGGDLIPLNIDKRFVMLRNSSGFYSYAIYEH 147
           DRIEAT  +VI +NDE+IELSF+RT+N+S     +P+NIDKRFVML+NSSGFYSYAI+E 
Sbjct: 61  DRIEATKMEVITQNDEKIELSFTRTWNTS-STTAVPVNIDKRFVMLQNSSGFYSYAIFER 120

Query: 148 LKEWPAFIIDNTRIVFKLRKDKFRYMAVADKRQRFMPLPDDRKPPRGEALAYPEAVLLVD 207
           L+ WPA  +DN R+VFKL K KF YMA++D RQR+MP+PDDR PPRG+ LAYPEAV L+D
Sbjct: 121 LQGWPAVELDNMRLVFKLNKKKFHYMAISDDRQRYMPVPDDRVPPRGQPLAYPEAVQLLD 180

Query: 208 PVEPELKGEVDDKYQYGCESKDARVHGWISTDPPIGLWQIAATEEFRSGGPLKQFLTSHV 267
           P+EPE KGEVDDKY+Y  ESKD +VHGWIST+  +G WQI  + EFRS GPLKQFL SHV
Sbjct: 181 PIEPEFKGEVDDKYEYSMESKDIKVHGWISTNDSVGFWQITPSNEFRSAGPLKQFLGSHV 240

Query: 268 GPTTLTVFHSAHYAGEDMVIKFGSNEPWKKVFGPIFIHLNSLPEGEDPLTLWDNAKKQMM 327
           GPT L VFHS HY G D+++ F + E WKKVFGP+FI+LNS P+G DPL LW  AK Q  
Sbjct: 241 GPTNLAVFHSTHYVGADLIMSFKNGEAWKKVFGPVFIYLNSFPKGVDPLLLWHEAKNQTK 300

Query: 328 VEVQSWPYGFPASEDFLKSDQRGTVSGRLIMRERFVSDESVPASGAYVGLALPGELGSWQ 387
           +E + WPY F AS+DF  SDQRG+VSGRL++R+RF+S E +PA+G+YVGLA PG++GSWQ
Sbjct: 301 IEEEKWPYNFTASDDFPASDQRGSVSGRLLVRDRFISSEDIPANGSYVGLAAPGDVGSWQ 360

Query: 388 TESKGYQFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQYNRFIAVTPGSDINVGEL 447
            E KGYQFW++AD+NG FS++NVRSG Y+LY + P FIG+Y  +    ++PGS I++G+L
Sbjct: 361 RECKGYQFWSKADENGSFSINNVRSGRYNLYAFAPGFIGDYHNDTVFDISPGSKISLGDL 420

Query: 448 VFEPPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDKFRQYGLWERYAELYPD 507
           V+EPPRDG TLWEIG+PDR+AAEFY+PDPNP ++NKLY+NHSDK+RQYGLWERY+ELYPD
Sbjct: 421 VYEPPRDGSTLWEIGVPDRSAAEFYIPDPNPSFVNKLYLNHSDKYRQYGLWERYSELYPD 480

Query: 508 EDLVYTVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDS--PDTHGTYRLRLALAT 567
           ED+VY V + +Y K+WFF QVTRK  +  Y GTTW+I+FQ D    +  G ++LR+ALAT
Sbjct: 481 EDMVYNVDIDDYSKNWFFMQVTRKQANGGYKGTTWQIRFQFDDKMKNVTGNFKLRIALAT 540

Query: 568 AHAAELQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPGGELVVGNNTIL 627
           ++ AELQVR+ND  A PPLF T  IG+DNTIARHGIHGLY +Y+V++P   L VGNNTI 
Sbjct: 541 SNVAELQVRVNDLSADPPLFRTEQIGRDNTIARHGIHGLYWLYSVNVPAASLHVGNNTIY 600

Query: 628 LTQASSNSPFVGIMYDYIRLEGP 646
           LTQA + SPF G+MYDYIRLE P
Sbjct: 601 LTQALATSPFQGLMYDYIRLEYP 622

[Close]
BLAST of HG10013427 vs. TAIR 10
Match: AT4G24430.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 860.5 bits (2222), Expect = 8.5e-250
Identity = 390/633 (61.61%), Postives = 504/633 (79.62%), Query Frame = 0 

Query: 17  LQLRIYDQHVVMDNGIIGVNLSNPNGMVIGIQYKEIENLLEVDNAEDDRGYWDIVWNVAG 76
           +QL + + HVVM NG + V +S P+G V GI Y+ ++NLLE  N + +RGYWD+VW+  G
Sbjct: 7   VQLDVQESHVVMGNGKVKVTISKPDGFVTGISYQGVDNLLETHNEDFNRGYWDLVWSDEG 66

Query: 77  SSGTKGIFDRIEATDFKVIVENDEQIELSFSRTYNSSIGGDLIPLNIDKRFVMLRNSSGF 136
           + GT G  +RI+ T F+V+VEN+E +E+SFSR ++SS+   + P+N+DKRF+M ++ +GF
Sbjct: 67  TPGTTGKSERIKGTSFEVVVENEELVEISFSRKWDSSLQDSIAPINVDKRFIMRKDVTGF 126

Query: 137 YSYAIYEHLKEWPAFIIDNTRIVFKLRKDKFRYMAVADKRQRFMPLPDDRKPPRGEALAY 196
           YSYAI+EHL EWPAF +  TRIV+KLRKDKF+YMA+AD RQR MPLP+DR   RG  LAY
Sbjct: 127 YSYAIFEHLAEWPAFNLPQTRIVYKLRKDKFKYMAIADNRQRKMPLPEDRLGKRGRPLAY 186

Query: 197 PEAVLLVDPVEPELKGEVDDKYQYGCESKDARVHGWISTDPPIGLWQIAATEEFRSGGPL 256
           PEAVLLV PVE E KGEVDDKY+Y  E+KD +VHGWIS +  +G WQI  + EFRSGG  
Sbjct: 187 PEAVLLVHPVEDEFKGEVDDKYEYSSENKDLKVHGWISHNLDLGCWQIIPSNEFRSGGLS 246

Query: 257 KQFLTSHVGPTTLTVFHSAHYAGEDMVIKFGSNEPWKKVFGPIFIHLNSLPE-GEDPLTL 316
           KQ LTSHVGP +L +F SAHYAGEDMV+K  + + WKKVFGP+F +LN LP+   DPL+L
Sbjct: 247 KQNLTSHVGPISLAMFLSAHYAGEDMVMKVKAGDSWKKVFGPVFTYLNCLPDKTSDPLSL 306

Query: 317 WDNAKKQMMVEVQSWPYGFPASEDFLKSDQRGTVSGRLIMRERFVSDESVPASGAYVGLA 376
           W +AK QM+ EVQSWPY FPASEDF  SD+RG +SGRL++ ++F+SD+ +PA+GA+VGLA
Sbjct: 307 WQDAKNQMLTEVQSWPYDFPASEDFPVSDKRGCISGRLLVCDKFLSDDFLPANGAFVGLA 366

Query: 377 LPGELGSWQTESKGYQFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQYNRFIAVTP 436
            PGE+GSWQ ESKGYQFWT AD +G F+++++R G Y+L G+V  +IG+YQY + I +T 
Sbjct: 367 PPGEVGSWQLESKGYQFWTEADSDGYFAINDIREGEYNLNGYVTGWIGDYQYEQLINITA 426

Query: 437 GSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDKFRQYGLW 496
           G DI+VG +V+EPPRDGPT+WEIGIPDR+AAEF+VPDPNPKYINKLY+ H D+FRQYGLW
Sbjct: 427 GCDIDVGNIVYEPPRDGPTVWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRFRQYGLW 486

Query: 497 ERYAELYPDEDLVYTVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHGTYR 556
           ERY ELYP EDLV+T+G+S+Y+KDWFFA VTRK+GD+ Y  TTW+IKF+L++     TY+
Sbjct: 487 ERYTELYPKEDLVFTIGVSDYKKDWFFAHVTRKMGDDTYQKTTWQIKFKLENVQKSCTYK 546

Query: 557 LRLALATAHAAELQVRLN--DAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPGGE 616
           +R+ALATA+ AELQVR+N  D +   P+FTTG+IG DN IARHGIHG+YR+Y VD+P  +
Sbjct: 547 IRIALATANVAELQVRMNDDDTEKTTPIFTTGVIGHDNAIARHGIHGIYRLYNVDVPSEK 606

Query: 617 LVVGNNTILLTQA-SSNSPFVGIMYDYIRLEGP 646
           LV G+NT+ LTQ  ++   F G+MYDYIRLEGP
Sbjct: 607 LVEGDNTLFLTQTMTTTGAFNGLMYDYIRLEGP 639

[Close]
BLAST of HG10013427 vs. TAIR 10
Match: AT1G09910.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 859.8 bits (2220), Expect = 1.5e-249
Identity = 390/631 (61.81%), Postives = 489/631 (77.50%), Query Frame = 0 

Query: 17  LQLRIYDQHVVMDNGIIGVNLSNPNGMVIGIQYKEIENLLEVDNAEDDRGYWDIVWNVAG 76
           + L ++D++VVMDNGI+ V LS P G++ GI+Y  I+N+LEV N E +RGYWD+ WN   
Sbjct: 49  VHLHVHDRYVVMDNGILQVTLSKPGGIITGIEYNGIDNVLEVRNKETNRGYWDLHWN--- 108

Query: 77  SSGTKGIFDRIEATDFKVIVENDEQIELSFSRTYNSSIGGDLIPLNIDKRFVMLRNSSGF 136
             G KGIFD I    F+VIVE +EQ+E+SF RT++ S+ G  IPLNIDKRF+MLR SSG 
Sbjct: 109 EPGGKGIFDVISGVTFRVIVETEEQVEISFLRTWDPSLEGKYIPLNIDKRFIMLRGSSGV 168

Query: 137 YSYAIYEHLKEWPAFIIDNTRIVFKLRKDKFRYMAVADKRQRFMPLPDDRKPPRGEALAY 196
           YSY IYEHLK+WP F +  TRI FKLRKDKF YMAVAD R+R MP PDD    R + L Y
Sbjct: 169 YSYGIYEHLKDWPGFELGETRIAFKLRKDKFHYMAVADDRKRIMPFPDDLCKGRCQTLDY 228

Query: 197 PEAVLLVDPVEPELKGEVDDKYQYGCESKDARVHGWISTDPPIGLWQIAATEEFRSGGPL 256
            EA LL  P +P L+GEVDDKYQY CE+KD RVHGWIS DPP+G WQI  + EFRSGGPL
Sbjct: 229 QEASLLTAPCDPRLQGEVDDKYQYSCENKDLRVHGWISFDPPVGFWQITPSNEFRSGGPL 288

Query: 257 KQFLTSHVGPTTLTVFHSAHYAGEDMVIKFGSNEPWKKVFGPIFIHLNSLPEGEDPLTLW 316
           KQ LTSHVGPTTL VFHS HYAG+ M+ +F   EPWKKV+GP+FI+LNS   G+DPL LW
Sbjct: 289 KQNLTSHVGPTTLAVFHSTHYAGKTMMPRFEHGEPWKKVYGPVFIYLNSTANGDDPLCLW 348

Query: 317 DNAKKQMMVEVQSWPYGFPASEDFLKSDQRGTVSGRLIMRERFVSDESVPASGAYVGLAL 376
           D+AK +MM EV+ WPY F AS+D+ KS++RGT  GRL++R+RF++++ + A GAYVGLA 
Sbjct: 349 DDAKIKMMAEVERWPYSFVASDDYPKSEERGTARGRLLIRDRFINNDLISARGAYVGLAP 408

Query: 377 PGELGSWQTESKGYQFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQYNRFIAVTPG 436
           PG+ GSWQ E KGYQFW  AD+ G FS+ NVR G Y+LY WVP+FIG+Y     + VT G
Sbjct: 409 PGDSGSWQIECKGYQFWAIADEAGYFSIGNVRPGEYNLYAWVPSFIGDYHNGTIVRVTSG 468

Query: 437 SDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDKFRQYGLWE 496
             I +G++V+EPPRDGPTLWEIGIPDR A+EF++PDP+P  +N++ V+H D+FRQYGLW+
Sbjct: 469 CMIEMGDIVYEPPRDGPTLWEIGIPDRKASEFFIPDPDPTLVNRVLVHHQDRFRQYGLWK 528

Query: 497 RYAELYPDEDLVYTVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHGTYRL 556
           +Y ++YP++DLVYTVG+S+YR+DWFFA V RK GD  + GTTW+I F L++ D    Y+L
Sbjct: 529 KYTDMYPNDDLVYTVGVSDYRRDWFFAHVPRKKGD-VHEGTTWQIIFNLENIDQKANYKL 588

Query: 557 RLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPGGELVV 616
           R+A+A+A  AELQ+R+NDA+A+ PLFTTGLIG+DN+IARHGIHG+Y +Y V+IPG  LV 
Sbjct: 589 RVAIASATLAELQIRINDAEAIRPLFTTGLIGRDNSIARHGIHGVYMLYAVNIPGNRLVQ 648

Query: 617 GNNTILLTQASSNSPFVGIMYDYIRLEGPLS 648
           G+NTI L Q   N PF GIMYDYIRLEGP S
Sbjct: 649 GDNTIFLKQPRCNGPFQGIMYDYIRLEGPPS 675

[Close]
BLAST of HG10013427 vs. TAIR 10
Match: AT1G09890.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 845.5 bits (2183), Expect = 2.8e-245
Identity = 392/620 (63.23%), Postives = 485/620 (78.23%), Query Frame = 0 

Query: 28  MDNGIIGVNLSNPNGMVIGIQYKEIENLLEVDNAEDDRGYWDIVWNVAGSSGTKGIFDRI 87
           MDNGI  V LS P+G+V GI+Y  I+NLLEV N E +RGYWD+VW   G SGT G FD I
Sbjct: 1   MDNGIARVTLSKPDGIVTGIEYNGIDNLLEVLNEEVNRGYWDLVW---GGSGTAGGFDVI 60

Query: 88  EATDFKVIVENDEQIELSFSRTYNSSIGGDLIPLNIDKRFVMLRNSSGFYSYAIYEHLKE 147
           + ++F+VIV+N+EQIELSF+R ++ S  G  +PLNIDKRFVML  SSGFY+YAIYEHLKE
Sbjct: 61  KGSNFEVIVKNEEQIELSFTRKWDPSQEGKAVPLNIDKRFVMLSGSSGFYTYAIYEHLKE 120

Query: 148 WPAFIIDNTRIVFKLRKDKFRYMAVADKRQRFMPLPDDRKPPRGEALAYPEAVLLVDPVE 207
           WPAF +  TRI FKLRK+KF YMAV D RQRFMPLPDDR P RG+ALAYPEAVLLV+P+E
Sbjct: 121 WPAFSLAETRIAFKLRKEKFHYMAVTDDRQRFMPLPDDRLPDRGQALAYPEAVLLVNPLE 180

Query: 208 PELKGEVDDKYQYGCESKDARVHGWISTD-PPIGLWQIAATEEFRSGGPLKQFLTSHVGP 267
            + KGEVDDKYQY CE+KD  VHGWI T+ P +G W I  + E+R+GGP KQ LTSHVGP
Sbjct: 181 SQFKGEVDDKYQYSCENKDITVHGWICTEQPSVGFWLITPSHEYRTGGPQKQNLTSHVGP 240

Query: 268 TTLTVFHSAHYAGEDMVIKFGSNEPWKKVFGPIFIHLNSLPEGE-DPLTLWDNAKKQMMV 327
           T L VF SAHY GED+V KF   E WKKVFGP+F++LNS  + + DPL LW +AK QM V
Sbjct: 241 TALAVFISAHYTGEDLVPKFSEGEAWKKVFGPVFVYLNSSTDDDNDPLWLWQDAKSQMNV 300

Query: 328 EVQSWPYGFPASEDFLKSDQRGTVSGRLIMRERFVSDESVPASGAYVGLALPGELGSWQT 387
           E +SWPY FPAS+D++K++QRG V GRL++++R+V  + + A+  YVGLA+PG  GSWQ 
Sbjct: 301 EAESWPYSFPASDDYVKTEQRGNVVGRLLVQDRYVDKDFIAANRGYVGLAVPGAAGSWQR 360

Query: 388 ESKGYQFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQYNRFIAVTPGSDINVGELV 447
           E K YQFWTR D+ G F +  +R G Y+LY W+P FIG+Y+Y+  I +T G  I V +LV
Sbjct: 361 ECKEYQFWTRTDEEGFFYISGIRPGQYNLYAWIPGFIGDYKYDDVITITSGCYIYVEDLV 420

Query: 448 FEPPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDKFRQYGLWERYAELYPDE 507
           ++PPR+G TLWEIG PDR+AAEFYVPDPNPKYIN LY NH D+FRQYGLWERYAELYPD+
Sbjct: 421 YQPPRNGATLWEIGFPDRSAAEFYVPDPNPKYINNLYQNHPDRFRQYGLWERYAELYPDK 480

Query: 508 DLVYTVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHGTYRLRLALATAHA 567
           DLVY VG S+YRKDWF+AQVTRK  +  Y GTTW+IKF+L + D + +Y LR+A+A+A  
Sbjct: 481 DLVYVVGSSDYRKDWFYAQVTRKKDNKTYQGTTWQIKFELKNIDKNHSYTLRVAIASATF 540

Query: 568 AELQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPGGELVVGNNTILLTQ 627
           +ELQ+R+N+A A  P+FT+GLIG+DN+IARHGIHGLY ++ V++ G +L+ G NT+ LTQ
Sbjct: 541 SELQIRVNNANA-SPMFTSGLIGRDNSIARHGIHGLYWLFNVEVAGSKLLEGENTLFLTQ 600

Query: 628 ASSNSPFVGIMYDYIRLEGP 646
             S SPF GIMYDYIR E P
Sbjct: 601 PRSTSPFQGIMYDYIRFEAP 616

[Close]
BLAST of HG10013427 vs. TAIR 10
Match: AT2G22620.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 754.2 bits (1946), Expect = 8.6e-218
Identity = 351/627 (55.98%), Postives = 455/627 (72.57%), Query Frame = 0 

Query: 20  RIYDQHVVMDNGIIGVNLSNPNGMVIGIQYKEIENLLEVDNAEDDRGYWDIVWNVAGSSG 79
           R+    VV+DNGI+ V  SNP G++ GI+Y  I+N+L  D+  DDRGYWD+VW       
Sbjct: 56  RVGHDTVVVDNGIVQVTFSNPEGLITGIKYHGIDNVL--DDKIDDRGYWDVVWY---EPE 115

Query: 80  TKGIFDRIEATDFKVIVENDEQIELSFSRTYNSSIGGDLIPLNIDKRFVMLRNSSGFYSY 139
            K   D++E T F++I +N+EQIE+SF+RT+  S  G L+PLN+DKR+++    SG Y Y
Sbjct: 116 KKQKTDKLEGTKFEIITQNEEQIEISFTRTWTISRRGSLVPLNVDKRYIIRSGVSGLYMY 175

Query: 140 AIYEHLKEWPAFIIDNTRIVFKLRKDKFRYMAVADKRQRFMPLPDDRKPPRGEALAYPEA 199
            I E L+ WP   +D  RIVFKL   KF +MA++D RQR MP   DR+    ++LAY EA
Sbjct: 176 GILERLEGWPDVDMDQIRIVFKLNPKKFDFMAISDDRQRSMPSMADRE--NSKSLAYKEA 235

Query: 200 VLLVDPVEPELKGEVDDKYQYGCESKDARVHGWISTDPPIGLWQIAATEEFRSGGPLKQF 259
           VLL +P  P  KGEVDDKY Y  E KD  VHGWIS+DPP+G W I  ++EFR GGP+KQ 
Sbjct: 236 VLLTNPSNPMFKGEVDDKYMYSMEDKDNNVHGWISSDPPVGFWMITPSDEFRLGGPIKQD 295

Query: 260 LTSHVGPTTLTVFHSAHYAGEDMVIKFGSNEPWKKVFGPIFIHLNSLPEGEDPLTLWDNA 319
           LTSH GP TL++F S HYAG++M + + + EPWKKVFGP+  +LNS+   +  L LW +A
Sbjct: 296 LTSHAGPITLSMFTSTHYAGKEMRMDYRNGEPWKKVFGPVLAYLNSVSPKDSTLRLWRDA 355

Query: 320 KKQMMVEVQSWPYGFPASEDFLKSDQRGTVSGRLIMRERFVSDESVPASGAYVGLALPGE 379
           K+QM  EV+SWPY F  SED+    QRGT+ G+ ++++ +VS   +    A+VGLA  GE
Sbjct: 356 KRQMAAEVKSWPYDFITSEDYPLRHQRGTLEGQFLIKDSYVSRLKIYGKFAFVGLAPIGE 415

Query: 380 LGSWQTESKGYQFWTRADQNGCFSLDNVRSGNYSLYGWVPNFIGNYQYNRFIAVTPGSDI 439
            GSWQTESKGYQFWT+AD+ G F ++NVR+GNYSLY W   FIG+Y+Y + I +TPGS++
Sbjct: 416 AGSWQTESKGYQFWTKADRRGRFIIENVRAGNYSLYAWGSGFIGDYKYEQNITITPGSEM 475

Query: 440 NVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNH-SDKFRQYGLWERY 499
           NVG LV+EPPR+GPTLWEIG+PDRTA EFY+PDP P  +NKLYVN   D+FRQYGLW+RY
Sbjct: 476 NVGPLVYEPPRNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKLYVNPLQDRFRQYGLWDRY 535

Query: 500 AELYPDEDLVYTVGLSEYRKDWFFAQVTRKIGDNKYAGTTWKIKFQLDSPDTHGTYRLRL 559
           A+LYP  DLVYT+G+S+YR DWFFA V R +G++ Y  TTW+I F L + +  G Y LR+
Sbjct: 536 ADLYPQNDLVYTIGVSDYRSDWFFAHVARNVGNDTYQPTTWQIIFNLKNVNRIGRYTLRI 595

Query: 560 ALATAHAAELQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRMYTVDIPGGELVVGN 619
           ALA+A  +ELQ+R+ND ++   +FTTG IGKDN IARHGIHGLYR+Y++D+ G  L VG+
Sbjct: 596 ALASAADSELQIRINDPKS-DAIFTTGFIGKDNAIARHGIHGLYRLYSIDVAGNLLSVGD 655

Query: 620 NTILLTQASSNSPFVGIMYDYIRLEGP 646
           NTI LTQ  S +PF GIMYDYIRLE P
Sbjct: 656 NTIFLTQTRSRTPFQGIMYDYIRLESP 674

The following BLAST results are available for this feature:
BLAST of HG10013427 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038899395.10.0e+0093.90probable rhamnogalacturonate lyase B isoform X3 [Benincasa hispida][more]
XP_038899393.10.0e+0093.74probable rhamnogalacturonate lyase B isoform X1 [Benincasa hispida][more]
KAA0038654.10.0e+0090.44putative rhamnogalacturonate lyase B isoform X1 [Cucumis melo var. makuwa] >TYK3... [more]
XP_008466140.20.0e+0090.44PREDICTED: probable rhamnogalacturonate lyase B isoform X1 [Cucumis melo][more]
XP_038899394.10.0e+0093.10probable rhamnogalacturonate lyase C isoform X2 [Benincasa hispida][more]
BLAST of HG10013427 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RJP21.4e-3126.02Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) OX=198628 GN=rhiE PE... [more]
A5ABH44.4e-1724.44Probable rhamnogalacturonate lyase B OS=Aspergillus niger (strain CBS 513.88 / F... [more]
Q5AZ854.9e-1623.25Rhamnogalacturonate lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 ... [more]
B8NCU73.2e-0727.69Probable rhamnogalacturonate lyase A OS=Aspergillus flavus (strain ATCC 200026 /... [more]
Q2U0Q14.1e-0727.27Probable rhamnogalacturonate lyase A OS=Aspergillus oryzae (strain ATCC 42149 / ... [more]
BLAST of HG10013427 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T5B70.0e+0090.44Rhamnogalacturonan endolyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A1S3CQI80.0e+0090.44Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103503645 PE=3 SV=1[more]
A0A0A0LE320.0e+0089.67Rhamnogalacturonan endolyase OS=Cucumis sativus OX=3659 GN=Csa_3G892760 PE=3 SV=... [more]
A0A6J1C8K50.0e+0086.11uncharacterized protein LOC111009378 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
A0A6J1FIG70.0e+0080.09probable rhamnogalacturonate lyase B isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of HG10013427 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G09880.11.4e-25263.40Rhamnogalacturonate lyase family protein [more]
AT4G24430.18.5e-25061.61Rhamnogalacturonate lyase family protein [more]
AT1G09910.11.5e-24961.81Rhamnogalacturonate lyase family protein [more]
AT1G09890.12.8e-24563.23Rhamnogalacturonate lyase family protein [more]
AT2G22620.18.6e-21855.98Rhamnogalacturonate lyase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010325Rhamnogalacturonate lyasePFAMPF06045Rhamnogal_lyasecoord: 18..214
e-value: 2.9E-84
score: 281.8
IPR029413Rhamnogalacturonan lyase, domain IIPFAMPF14686fn3_3coord: 368..440
e-value: 2.3E-20
score: 72.1
IPR029413Rhamnogalacturonan lyase, domain IICDDcd10316RGL4_Mcoord: 345..444
e-value: 5.6789E-30
score: 111.572
IPR014718Glycoside hydrolase-type carbohydrate-bindingGENE3D2.70.98.10coord: 24..297
e-value: 2.5E-6
score: 29.1
NoneNo IPR availableGENE3D2.60.40.1120coord: 342..441
e-value: 2.2E-6
score: 29.8
NoneNo IPR availableGENE3D2.60.120.260coord: 452..643
e-value: 2.1E-23
score: 84.7
NoneNo IPR availablePANTHERPTHR32018RHAMNOGALACTURONATE LYASE FAMILY PROTEINcoord: 8..649
NoneNo IPR availablePANTHERPTHR32018:SF40RHAMNOGALACTURONATE LYASE B-RELATEDcoord: 8..649
NoneNo IPR availableCDDcd10317RGL4_Ccoord: 456..643
e-value: 8.85492E-60
score: 195.572
NoneNo IPR availableCDDcd10320RGL4_Ncoord: 25..305
e-value: 8.66422E-73
score: 233.82
IPR029411Rhamnogalacturonan lyase, domain IIIPFAMPF14683CBM-likecoord: 454..642
e-value: 2.0E-55
score: 187.3
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 451..643
IPR013784Carbohydrate-binding-like foldSUPERFAMILY49452Starch-binding domain-likecoord: 342..442

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10013427.1HG10013427.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0102210 rhamnogalacturonan endolyase activity