HG10013386 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCGCGCTGTCGATCTCTGGCAACCCCAACCATTTCCCTGATTAAATCCACCATAACCAAACCCTCCATTAAACCCAGATCCGCCGCTTCCTTCACCGTCTGTAATCCACCTACAATTTCCAGGTAGGCAAGATTATTGAACCATTTTCTTGCCCCGTTAGTTAAATTTATCTTTTTGGTGATTTTACATTTCTTAGATTGCTAACAGAGAGCTTTGATTCTTCAGGTCGGTTTCGCAGTTCGGTTCCCTTCAGTCTCTGCTTCCTCTTCATTCGGCAGTCTCTTCGGCTCGACTAACCTCGTGTCTTGGAATCGATTCATTGTCCTCGAGGTCGTTGTCTCAGGGTATGCTCTGCAGTGGAAACCCAGGAGTTTGA ATGGCTTCGCGCTGTCGATCTCTGGCAACCCCAACCATTTCCCTGATTAAATCCACCATAACCAAACCCTCCATTAAACCCAGATCCGCCGCTTCCTTCACCGTCTGTAATCCACCTACAATTTCCAGGTCGGTTTCGCAGTTCGGTTCCCTTCAGTCTCTGCTTCCTCTTCATTCGGCAGTCTCTTCGGCTCGACTAACCTCGTGTCTTGGAATCGATTCATTGTCCTCGAGGTCGTTGTCTCAGGGTATGCTCTGCAGTGGAAACCCAGGAGTTTGA ATGGCTTCGCGCTGTCGATCTCTGGCAACCCCAACCATTTCCCTGATTAAATCCACCATAACCAAACCCTCCATTAAACCCAGATCCGCCGCTTCCTTCACCGTCTGTAATCCACCTACAATTTCCAGGTCGGTTTCGCAGTTCGGTTCCCTTCAGTCTCTGCTTCCTCTTCATTCGGCAGTCTCTTCGGCTCGACTAACCTCGTGTCTTGGAATCGATTCATTGTCCTCGAGGTCGTTGTCTCAGGGTATGCTCTGCAGTGGAAACCCAGGAGTTTGA MASRCRSLATPTISLIKSTITKPSIKPRSAASFTVCNPPTISRSVSQFGSLQSLLPLHSAVSSARLTSCLGIDSLSSRSLSQGMLCSGNPGV Homology
BLAST of HG10013386 vs. NCBI nr
Match: XP_038897118.1 (protein NONRESPONDING TO OXYLIPINS 2, mitochondrial isoform X1 [Benincasa hispida]) HSP 1 Score: 151.8 bits (382), Expect = 3.0e-33 Identity = 83/92 (90.22%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of HG10013386 vs. NCBI nr
Match: KAA0038620.1 (uncharacterized protein E6C27_scaffold92G001500 [Cucumis melo var. makuwa] >TYK31219.1 uncharacterized protein E5676_scaffold455G005050 [Cucumis melo var. makuwa]) HSP 1 Score: 151.0 bits (380), Expect = 5.1e-33 Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of HG10013386 vs. NCBI nr
Match: XP_008466066.1 (PREDICTED: uncharacterized protein LOC103503603 isoform X1 [Cucumis melo]) HSP 1 Score: 151.0 bits (380), Expect = 5.1e-33 Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of HG10013386 vs. NCBI nr
Match: XP_004136221.1 (uncharacterized protein LOC101217801 isoform X1 [Cucumis sativus] >KGN60320.1 hypothetical protein Csa_001796 [Cucumis sativus]) HSP 1 Score: 146.0 bits (367), Expect = 1.6e-31 Identity = 80/92 (86.96%), Postives = 84/92 (91.30%), Query Frame = 0
BLAST of HG10013386 vs. NCBI nr
Match: XP_022940103.1 (uncharacterized protein LOC111445824 isoform X1 [Cucurbita moschata] >XP_022981080.1 uncharacterized protein LOC111480335 isoform X1 [Cucurbita maxima] >XP_023523540.1 uncharacterized protein LOC111787734 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 137.1 bits (344), Expect = 7.6e-29 Identity = 76/92 (82.61%), Postives = 82/92 (89.13%), Query Frame = 0
BLAST of HG10013386 vs. ExPASy Swiss-Prot
Match: Q6NNL9 (Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NOXY2 PE=1 SV=2) HSP 1 Score: 113.6 bits (283), Expect = 1.2e-24 Identity = 63/93 (67.74%), Postives = 74/93 (79.57%), Query Frame = 0
BLAST of HG10013386 vs. ExPASy TrEMBL
Match: A0A5D3E5V6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005050 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.5e-33 Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of HG10013386 vs. ExPASy TrEMBL
Match: A0A1S3CQD8 (uncharacterized protein LOC103503603 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503603 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.5e-33 Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of HG10013386 vs. ExPASy TrEMBL
Match: A0A0A0LE59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895660 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 7.9e-32 Identity = 80/92 (86.96%), Postives = 84/92 (91.30%), Query Frame = 0
BLAST of HG10013386 vs. ExPASy TrEMBL
Match: A0A6J1IYG2 (uncharacterized protein LOC111480335 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480335 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 3.7e-29 Identity = 76/92 (82.61%), Postives = 82/92 (89.13%), Query Frame = 0
BLAST of HG10013386 vs. ExPASy TrEMBL
Match: A0A6J1FNC8 (uncharacterized protein LOC111445824 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445824 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 3.7e-29 Identity = 76/92 (82.61%), Postives = 82/92 (89.13%), Query Frame = 0
BLAST of HG10013386 vs. TAIR 10
Match: AT5G11630.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 113.6 bits (283), Expect = 8.4e-26 Identity = 63/93 (67.74%), Postives = 74/93 (79.57%), Query Frame = 0
BLAST of HG10013386 vs. TAIR 10
Match: AT5G11630.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.2); Has 82 Blast hits to 82 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 94.7 bits (234), Expect = 4.0e-20 Identity = 54/83 (65.06%), Postives = 65/83 (78.31%), Query Frame = 0
BLAST of HG10013386 vs. TAIR 10
Match: AT4G17310.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 4.0e-12 Identity = 48/97 (49.48%), Postives = 61/97 (62.89%), Query Frame = 0
BLAST of HG10013386 vs. TAIR 10
Match: AT4G17310.2 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 60.1 bits (144), Expect = 1.1e-09 Identity = 44/89 (49.44%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of HG10013386 vs. TAIR 10
Match: AT5G47455.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast hits to 147 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.5 bits (114), Expect = 3.3e-06 Identity = 42/99 (42.42%), Postives = 55/99 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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