HG10013370 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAAGTAGAGGCGGAATCCAGAGACGAAGCAATGAGATCCAAAACCACCGTTCGATGTGCGAAAGCAGCTTTTCTTCTTTCTTCGCTCAAATCCTCCCAAAATCGCCATCTCAGAGCCACTGTCGATGAACAAGCCAAGGTTCTCAATTACAACTTATTATCAGTACCTGCCCTAGCTTGTGGATAGCGTTCTGGTTTATTTGATTCGCGATTTTGAAAAATTAAAACGTCAATTACCTTTCAGGAGAAAGAGATGCTGAGGAAAGCTGTGGGAGATTTGAAGATCGAGTTGGCTAGGGAGCATCTGAGGAATAAGAGGATCAAACTCTGCGGTTTGATGGAATTTGTTCTTCAGCTTCTGCTGGTTATCTCTCTTTCGAGCTTCTTCCTTTTTGTTGCCTTCAAATTTGTCTGA ATGGAGAAAGTAGAGGCGGAATCCAGAGACGAAGCAATGAGATCCAAAACCACCGTTCGATGTGCGAAAGCAGCTTTTCTTCTTTCTTCGCTCAAATCCTCCCAAAATCGCCATCTCAGAGCCACTGTCGATGAACAAGCCAAGGAGAAAGAGATGCTGAGGAAAGCTGTGGGAGATTTGAAGATCGAGTTGGCTAGGGAGCATCTGAGGAATAAGAGGATCAAACTCTGCGGTTTGATGGAATTTGTTCTTCAGCTTCTGCTGGTTATCTCTCTTTCGAGCTTCTTCCTTTTTGTTGCCTTCAAATTTGTCTGA ATGGAGAAAGTAGAGGCGGAATCCAGAGACGAAGCAATGAGATCCAAAACCACCGTTCGATGTGCGAAAGCAGCTTTTCTTCTTTCTTCGCTCAAATCCTCCCAAAATCGCCATCTCAGAGCCACTGTCGATGAACAAGCCAAGGAGAAAGAGATGCTGAGGAAAGCTGTGGGAGATTTGAAGATCGAGTTGGCTAGGGAGCATCTGAGGAATAAGAGGATCAAACTCTGCGGTTTGATGGAATTTGTTCTTCAGCTTCTGCTGGTTATCTCTCTTTCGAGCTTCTTCCTTTTTGTTGCCTTCAAATTTGTCTGA MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVAFKFV Homology
BLAST of HG10013370 vs. NCBI nr
Match: XP_022940284.1 (uncharacterized protein LOC111445952 [Cucurbita moschata] >XP_023524781.1 uncharacterized protein LOC111788615 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 153.3 bits (386), Expect = 1.2e-33 Identity = 88/104 (84.62%), Postives = 93/104 (89.42%), Query Frame = 0
BLAST of HG10013370 vs. NCBI nr
Match: KAA0038606.1 (putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa] >TYK31205.1 putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa]) HSP 1 Score: 152.9 bits (385), Expect = 1.5e-33 Identity = 90/105 (85.71%), Postives = 95/105 (90.48%), Query Frame = 0
BLAST of HG10013370 vs. NCBI nr
Match: KAG7031715.1 (hypothetical protein SDJN02_05756, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 151.0 bits (380), Expect = 5.7e-33 Identity = 86/104 (82.69%), Postives = 93/104 (89.42%), Query Frame = 0
BLAST of HG10013370 vs. NCBI nr
Match: XP_022138206.1 (uncharacterized protein LOC111009432 [Momordica charantia]) HSP 1 Score: 150.6 bits (379), Expect = 7.5e-33 Identity = 84/102 (82.35%), Postives = 92/102 (90.20%), Query Frame = 0
BLAST of HG10013370 vs. NCBI nr
Match: XP_011652624.1 (uncharacterized protein LOC105435036 [Cucumis sativus] >KGN60336.1 hypothetical protein Csa_001987 [Cucumis sativus]) HSP 1 Score: 144.1 bits (362), Expect = 7.0e-31 Identity = 84/102 (82.35%), Postives = 92/102 (90.20%), Query Frame = 0
BLAST of HG10013370 vs. ExPASy TrEMBL
Match: A0A6J1FJM5 (uncharacterized protein LOC111445952 OS=Cucurbita moschata OX=3662 GN=LOC111445952 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 5.6e-34 Identity = 88/104 (84.62%), Postives = 93/104 (89.42%), Query Frame = 0
BLAST of HG10013370 vs. ExPASy TrEMBL
Match: A0A5D3E7E0 (Putative Retrotransposon-derived protein PEG10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004900 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 7.3e-34 Identity = 90/105 (85.71%), Postives = 95/105 (90.48%), Query Frame = 0
BLAST of HG10013370 vs. ExPASy TrEMBL
Match: A0A6J1C920 (uncharacterized protein LOC111009432 OS=Momordica charantia OX=3673 GN=LOC111009432 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 3.6e-33 Identity = 84/102 (82.35%), Postives = 92/102 (90.20%), Query Frame = 0
BLAST of HG10013370 vs. ExPASy TrEMBL
Match: A0A0A0LJY1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895820 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 3.4e-31 Identity = 84/102 (82.35%), Postives = 92/102 (90.20%), Query Frame = 0
BLAST of HG10013370 vs. ExPASy TrEMBL
Match: A0A5N6R7K9 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013632 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.3e-19 Identity = 53/96 (55.21%), Postives = 81/96 (84.38%), Query Frame = 0
BLAST of HG10013370 vs. TAIR 10
Match: AT1G78172.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 58.5 bits (140), Expect = 3.6e-09 Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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